HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:48.1 nTPM
HPA Brain:91.4 nTPM
GTEx:48.1 nTPM
FANTOM5:92.4 Scaled Tags Per Million
Pig:30.8 nTPM
Mouse:12.5 nTPM
Allen mouse:0.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003279Antibody HPA003360Antibody CAB019303
Glial cells Not detectedNot detectedMedium
Neuronal cells MediumMediumHigh







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 91.4
Sample id Sample description nTPM
Hippocampus
nTPM: 65.8
1898 Male, age 80, left hemisphere 71.9
1855 Male, age 76, left hemisphere 71.1
2529 Female, age 94, left hemisphere 69.6
2621 Female, age 67, right hemisphere 66.6
2148 Female, age 91, left hemisphere 65.5
1911 Female, age 85, right hemisphere 50.0
Dentate gyrus
nTPM: 64.4
2010 Male, age 76, both hemispheres 71.1
2530 Female, age 94, left hemisphere 70.3
2531 Female, age 67, both hemispheres 67.7
1927 Female, age 91, both hemispheres 60.4
2246 Female, age 85, both hemispheres 60.2
2528 Male, age 74, both hemispheres 56.7
Entorhinal gyrus
nTPM: 64.6
2764 Male, age 80, right hemisphere 83.2
2686 Male, age 75, right hemisphere 70.7
1787 Male, age 76, left hemisphere 67.1
1938 Female, age 85, left hemisphere 59.0
2117 Female, age 91, right hemisphere 55.5
2613 Female, age 94, left hemisphere 52.1
Hippocampus, CA1
nTPM: 66.9
2749 Male, age 80, left hemisphere 78.2
2045 Male, age 76, both hemispheres 77.8
1873 Female, age 85, both hemispheres 60.3
2082 Female, age 91, right hemisphere 59.9
2527 Male, age 74, both hemispheres 58.2
Hippocampus, CA2
nTPM: 68.0
1940 Female, age 85, left hemisphere 81.4
1963 Male, age 80, left hemisphere 70.9
1892 Male, age 76, both hemispheres 69.4
2113 Female, age 91, right hemisphere 68.5
2437 Female, age 94, left hemisphere 61.8
2249 Male, age 74, both hemispheres 56.3
Hippocampus, CA3
nTPM: 61.9
2137 Male, age 80, left hemisphere 69.6
2620 Female, age 94, left hemisphere 68.2
1867 Male, age 76, both hemispheres 63.8
2861 Female, age 67, both hemispheres 63.8
1891 Female, age 85, both hemispheres 53.8
2436 Male, age 74, both hemispheres 52.2
Parahippocampal cortex
nTPM: 73.8
1850 Male, age 80, both hemispheres 106.4
2532 Female, age 72, left hemisphere 83.8
2245 Female, age 91, both hemispheres 79.7
2018 Male, age 76, both hemispheres 73.7
2622 Female, age 67, right hemisphere 72.0
1933 Female, age 85, both hemispheres 71.8
2693 Female, age 94, both hemispheres 66.3
1990 Female, age 91, right hemisphere 64.8
2250 Female, age 67, right hemisphere 61.6
2692 Male, age 74, both hemispheres 57.8
Perirhinal gyrus
nTPM: 91.4
1794 Male, age 80, right hemisphere 111.9
1841 Female, age 85, right hemisphere 93.7
2521 Female, age 94, right hemisphere 88.7
1847 Female, age 91, left hemisphere 85.1
2848 Male, age 76, right hemisphere 77.7
Subiculum
nTPM: 58.3
1977 Female, age 85, both hemispheres 63.9
1901 Male, age 80, both hemispheres 61.4
2438 Female, age 94, left hemisphere 56.7
2619 Male, age 74, both hemispheres 56.1
2729 Female, age 91, right hemisphere 56.0
2042 Male, age 76, both hemispheres 55.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 48.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 48.1
Samples: 197

Max nTPM: 91.8
Min nTPM: 29.2
Std nTPM: 10.4
Median nTPM: 45.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 91.8
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 91.5
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 78.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 77.7
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 75.9
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 74.9
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 73.3
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 71.1
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 70.7
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 68.7
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 65.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 92.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 92.4
FF:10153-102I9 76 years, female 99.6
FF:10169-103B7 60 years, female 85.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 30.8
Pig sample Sample description nTPM
Subiculum
nTPM: 24.2
Samples: 4

Max nTPM: 29.4
Min nTPM: 21.9
Sample A Female 29.4
Sample B Female 22.3
Sample C Male 21.9
Sample D Male 23.3
Dorsal hippocampus
nTPM: 30.8
Samples: 4

Max nTPM: 36.2
Min nTPM: 22.2
Sample A Female 36.2
Sample B Female 29.6
Sample C Male 35.0
Sample D Male 22.2
Entorhinal cortex
nTPM: 26.7
Samples: 4

Max nTPM: 29.6
Min nTPM: 25.4
Sample A Female 26.0
Sample B Female 29.6
Sample C Male 25.4
Sample D Male 25.8
Ventral hippocampus
nTPM: 26.2
Samples: 4

Max nTPM: 30.1
Min nTPM: 19.7
Sample A Female 29.3
Sample B Female 19.7
Sample C Male 25.7
Sample D Male 30.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 12.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 12.6
Samples: 4

Max nTPM: 13.4
Min nTPM: 11.8
Sample A Male 12.6
Sample B Male 13.4
Sample C Female 11.8
Sample D Female 12.4
Hippocampal formation
nTPM: 10.8
Samples: 4

Max nTPM: 11.6
Min nTPM: 9.9
Sample A Male 11.6
Sample B Male 10.8
Sample C Female 9.9
Sample D Female 11.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.6
2453 Antisense, RP_Baylor_103278, Mouse strain C57BL/6J (56 days, male) 0.6
2452 Antisense, RP_Baylor_103278, Mouse strain C57BL/6J (56 days, male) 0.4

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