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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
COPA is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
40.2
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
98.6
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
78.7
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
75.4
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
70.3
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
65.2
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
63.9
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
60.7
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
59.4
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
59.3
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
56.2
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
54.8
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
54.3
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
51.8
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
51.2
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
50.2
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
50.1
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
45.5
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
44.7
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
44.3
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
44.0
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
43.9
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
43.0
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
42.1
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
41.2
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
40.8
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
40.4
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
40.3
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
40.1
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
40.0
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
39.6
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
39.2
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
39.2
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
38.4
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
38.2
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
37.0
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
37.0
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
35.8
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
35.5
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
34.7
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
34.6
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
33.3
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
33.2
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
32.9
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
32.8
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
32.3
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
31.4
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
30.6
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
30.5
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
28.7
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
28.5
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
28.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
27.6
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
26.5
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
26.5
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
23.3
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
22.8
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
22.1
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
21.5
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
20.1
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
20.1
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
19.1
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
18.2
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
15.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
COPA is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
65.2
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
237.5
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
180.5
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
171.1
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
136.6
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
136.2
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
135.5
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
129.3
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
122.7
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
122.4
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
120.5
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
116.0
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
113.9
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
113.0
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
106.5
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
104.8
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
104.3
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
104.2
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
103.2
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
102.6
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
102.1
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
101.2
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
98.0
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
97.0
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
95.9
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
94.8
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
94.3
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
94.1
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
93.9
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
92.3
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
91.7
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
91.4
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
91.1
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
89.9
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
89.4
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
89.3
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
89.2
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
88.9
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
88.7
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
88.6
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
88.3
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
88.2
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
88.1
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
87.9
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
86.8
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
86.6
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
86.5
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
86.3
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
86.3
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
86.3
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
85.9
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
85.8
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
85.7
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
85.5
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
85.0
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
85.0
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
84.9
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
84.5
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
84.3
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
84.1
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
83.8
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
83.8
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
83.6
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
83.5
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
83.4
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
83.1
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
82.9
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
82.6
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
82.5
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
82.5
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
82.2
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
82.1
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
82.0
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
82.0
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
82.0
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
82.0
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
81.9
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
81.8
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
81.5
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
81.5
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
81.1
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
81.0
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
81.0
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
80.6
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
80.5
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
80.3
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
80.1
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
80.0
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
80.0
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
79.9
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
79.9
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
79.5
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
79.4
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
79.3
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
79.0
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
78.8
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
78.2
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
78.1
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
78.1
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
78.0
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
77.8
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
77.6
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
77.6
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
77.5
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
77.3
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
77.2
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
77.2
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
77.2
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
76.9
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
76.8
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
76.8
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
76.7
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
76.5
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
76.5
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
76.4
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
76.4
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
76.2
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
76.2
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
76.1
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
76.1
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
75.9
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
75.7
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
75.7
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
75.6
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
75.5
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
75.5
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
75.4
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
75.4
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
75.4
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
75.4
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
75.3
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
75.3
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
75.1
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
74.8
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
74.8
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
74.7
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
74.4
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
74.4
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
74.3
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
74.3
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
74.3
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
74.2
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
74.0
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
73.9
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
73.9
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
73.7
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
73.5
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
73.5
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
73.4
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
73.4
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
73.2
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
73.1
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
73.0
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
73.0
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
73.0
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
73.0
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
72.8
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
72.8
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
72.7
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
72.7
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
72.7
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
72.7
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
72.6
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
72.6
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
72.6
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
72.5
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
72.3
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
72.2
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
72.2
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
72.2
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
72.2
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
72.1
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
71.9
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
71.9
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
71.8
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
71.7
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
71.6
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
71.6
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
71.5
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
71.5
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
71.5
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
71.4
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
71.3
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
71.3
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
70.9
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
70.9
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
70.8
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
70.6
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
70.6
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
70.6
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
70.6
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
70.6
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
70.5
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
70.4
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
70.2
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
69.9
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
69.8
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
69.8
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
69.8
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
69.7
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
69.7
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
69.6
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
69.6
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
69.5
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
69.5
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
69.4
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
69.2
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
69.1
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
69.0
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
68.9
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
68.9
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
68.8
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
68.8
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
68.6
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
68.6
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
68.5
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
68.5
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
68.4
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
68.2
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
67.7
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
67.7
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
67.7
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
67.7
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
67.6
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
67.6
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
67.5
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
67.5
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
67.5
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
67.4
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
67.4
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
67.4
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
67.3
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
67.3
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
67.3
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
67.2
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
67.1
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
67.0
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
67.0
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
66.9
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
66.8
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
66.7
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
66.7
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
66.6
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
66.5
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
66.4
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
66.3
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
66.2
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
66.2
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
66.2
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
66.0
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
66.0
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
65.9
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
65.9
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
65.9
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
65.7
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
65.7
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
65.5
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
65.4
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
65.4
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
65.4
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
65.3
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
65.2
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
65.2
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
65.0
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
64.7
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
64.5
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
64.5
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
64.5
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
64.5
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
64.4
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
64.4
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
64.2
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
63.9
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
63.9
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
63.9
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
63.8
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
63.8
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
63.7
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
63.7
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
63.6
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
63.5
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
63.5
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
63.5
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
63.3
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
63.2
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
63.2
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
63.0
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
63.0
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
62.9
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
62.7
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
62.7
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
62.6
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
62.6
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
62.4
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
62.4
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
62.4
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
62.4
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
62.3
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
62.1
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
61.8
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
61.7
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
61.6
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
61.6
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
61.6
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
61.4
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
61.4
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
61.4
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
61.3
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
61.2
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
61.2
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
61.1
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
61.0
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
60.9
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
60.8
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
60.4
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
60.3
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
60.3
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
60.3
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
60.2
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
60.2
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
60.1
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
59.9
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
59.8
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
59.4
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
59.4
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
59.4
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
59.4
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
59.3
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
59.3
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
59.3
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
59.2
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
59.2
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
59.2
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
58.9
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
58.8
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
58.7
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
58.6
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
58.6
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
58.5
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
58.4
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
58.0
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
57.9
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
57.8
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
57.7
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
57.4
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
57.3
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
57.2
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
57.2
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
57.2
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
57.1
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
57.1
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
56.8
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
56.7
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
56.6
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
56.1
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
56.1
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
55.9
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
55.9
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
55.8
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
55.7
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
55.6
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
55.5
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
55.3
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
55.3
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
55.3
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
55.2
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
55.1
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
55.1
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
55.1
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
55.0
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
54.9
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
54.9
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
54.8
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
54.5
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
54.4
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
54.3
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
54.2
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
54.1
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
54.1
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
54.1
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
54.1
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
54.1
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
54.0
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
53.8
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
53.8
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
53.6
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
53.3
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
53.2
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
53.1
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
53.0
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
53.0
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
52.9
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
52.7
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
52.7
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
52.7
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
52.6
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
52.5
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
52.5
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
52.5
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
52.4
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
52.3
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
52.2
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
52.2
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
52.0
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
51.8
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
51.8
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
51.8
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
51.7
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
51.5
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
51.4
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
51.4
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
51.2
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
51.1
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
50.7
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
50.6
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
50.6
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
50.4
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
50.2
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
50.2
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
49.8
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
49.7
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
49.4
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
49.2
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
49.1
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
49.0
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
48.7
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
48.3
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
48.0
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
47.9
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
47.9
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
47.6
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
47.6
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
47.5
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
47.5
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
47.4
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
47.3
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
47.1
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
47.1
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
47.1
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
47.0
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
47.0
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
46.9
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
46.9
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
46.7
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
46.6
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
46.5
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
46.5
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
46.4
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
46.4
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
46.4
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
46.3
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
46.2
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
45.9
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
45.8
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
45.3
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
45.0
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
45.0
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
44.9
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
44.8
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
44.7
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
44.7
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
44.1
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
43.8
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
43.6
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
43.3
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
43.1
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
42.9
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
42.7
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
42.0
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
41.9
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
41.7
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
41.6
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
41.5
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
41.1
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
41.0
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
40.9
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
40.7
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
40.6
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
40.4
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
40.4
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
40.3
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
40.3
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
40.3
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
40.0
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
39.8
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
39.6
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
39.3
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
39.1
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
39.1
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
38.8
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
38.6
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
38.4
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
37.6
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
37.5
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
37.3
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
37.0
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
35.6
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
34.9
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
34.8
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
34.4
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
33.3
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
33.3
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
33.0
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
32.6
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
30.9
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
30.4
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
29.7
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
28.7
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
28.1
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
27.6
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
27.2
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
26.2
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
24.9
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
24.8
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
24.5
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
23.2
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
23.1
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
22.8
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
22.5
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
18.0
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
13.3
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
COPA is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
52.3
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
120.1
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
113.0
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
98.7
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
80.4
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
80.1
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
76.8
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
75.3
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
73.7
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
72.4
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
71.2
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
70.7
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
70.7
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
70.7
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
70.1
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
68.7
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
68.1
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
66.5
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
66.3
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
64.3
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
63.1
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
62.3
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
60.8
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
60.3
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
59.9
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
59.6
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
57.3
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
57.1
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
56.6
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
56.5
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
56.3
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
56.1
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
56.0
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
55.9
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
55.0
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
54.7
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
54.7
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
54.6
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
53.9
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
53.6
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
53.5
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
53.4
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
53.2
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
52.6
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
52.0
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
51.8
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
51.1
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
50.2
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
49.5
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
49.4
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
49.1
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
48.7
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
47.8
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
47.8
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
47.8
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
47.7
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
47.7
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
47.6
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
46.8
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
46.7
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
46.0
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
45.9
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
45.8
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
45.5
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
45.3
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
45.1
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
45.1
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
45.1
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
45.0
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
44.8
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
44.1
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
43.9
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
43.5
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
43.5
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
43.3
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
42.8
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
41.9
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
41.0
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
40.6
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
40.6
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
40.1
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
40.1
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
39.3
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
38.8
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
38.4
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
38.0
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
38.0
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
37.2
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
36.9
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
36.2
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
36.0
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
35.6
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
35.6
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
35.3
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
35.3
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
34.8
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
33.9
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
31.8
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
31.2
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
30.2
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
COPA is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
61.8
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
196.5
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
161.4
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
148.5
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
136.6
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
132.8
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
126.8
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
125.9
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
124.7
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
123.6
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
122.7
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
112.4
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
111.6
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
110.4
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
109.2
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
108.2
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
106.9
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
106.9
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
102.9
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
102.6
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
102.4
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
101.4
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
98.6
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
95.8
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
95.7
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
95.6
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
95.1
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
94.6
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
94.1
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
92.9
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
91.1
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
89.4
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
86.6
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
86.2
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
86.0
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
85.7
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
85.7
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
85.5
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
84.8
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
84.8
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
84.8
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
84.1
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
83.4
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
80.8
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
80.3
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
80.2
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
80.0
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
79.9
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
79.9
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
79.7
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
79.4
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
78.8
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
78.5
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
78.5
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
78.3
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
76.4
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
76.3
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
75.2
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
75.1
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
74.7
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
74.7
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
74.3
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
74.1
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
73.8
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
73.5
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
73.4
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
72.0
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
72.0
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
71.9
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
71.7
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
71.7
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
71.5
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
71.5
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
71.4
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
71.3
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
71.2
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
71.1
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
70.6
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
70.3
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
70.0
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
69.8
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
69.4
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
69.2
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
69.2
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
69.0
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
68.5
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
68.3
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
68.0
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
67.8
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
67.5
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
66.2
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
66.1
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
65.4
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
65.3
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
65.3
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
65.3
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
65.3
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
65.1
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
65.1
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
65.0
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
64.6
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
64.6
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
64.4
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
64.1
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
63.6
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
63.6
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
63.2
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
63.0
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
62.9
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
62.5
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
62.4
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
62.4
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
62.4
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
62.4
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
62.3
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
62.2
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
62.1
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
61.8
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
61.5
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
61.5
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
61.4
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
61.4
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
60.7
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
60.6
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
60.4
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
60.4
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
60.2
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
60.1
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
59.7
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
59.5
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
59.4
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
59.2
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
59.1
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
58.9
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
58.3
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
58.3
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
58.2
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
58.1
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
58.0
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
57.4
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
57.1
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
57.0
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
57.0
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
56.8
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
56.7
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
56.7
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
56.5
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
56.4
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
56.4
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
56.3
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
56.3
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
56.3
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
56.2
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
56.2
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
56.1
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
56.0
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
55.9
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
55.9
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
55.8
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
55.7
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
55.7
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
55.6
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
55.4
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
55.2
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
55.1
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
54.9
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
54.6
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
54.4
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
54.4
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
54.2
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
54.0
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
54.0
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
53.9
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
53.9
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
53.2
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
52.5
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
52.3
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
52.0
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
51.9
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
51.8
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
51.7
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
51.5
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
51.5
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
50.9
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
50.6
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
50.6
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
50.5
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
50.3
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
50.2
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
50.1
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
50.1
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
49.9
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
49.9
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
49.6
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
49.6
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
49.4
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
49.2
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
49.0
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
49.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
48.9
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
48.8
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
48.6
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
48.5
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
48.1
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
48.1
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
48.1
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
47.7
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
47.7
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
47.6
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
47.4
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
47.2
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
46.7
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
46.7
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
46.7
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
46.6
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
46.2
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
46.2
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
46.1
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
45.2
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
45.0
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
45.0
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
44.9
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
44.9
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
44.8
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
44.4
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
44.4
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
44.3
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
44.1
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
43.9
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
43.8
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
43.6
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
43.5
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
43.3
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
43.3
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
43.1
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
42.8
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
42.6
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
42.5
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
42.3
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
41.7
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
41.2
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
41.0
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
40.4
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
39.8
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
39.7
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
38.6
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
38.3
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
38.2
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
38.1
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
37.6
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
37.3
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
37.3
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
37.2
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
37.1
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
36.7
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
36.0
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
35.9
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
35.8
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
35.8
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
35.5
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
34.6
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
34.1
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
33.9
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
33.7
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
33.4
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
32.9
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
31.3
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
30.9
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
30.2
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
30.2
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
30.2
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
30.2
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
30.0
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
29.0
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
28.9
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
28.5
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
27.9
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
27.2
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
22.9
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
18.5
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
13.2
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
12.6
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
10.6
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0088550004
Tumor
0.7
CPT0001180009
Tumor
0.7
CPT0001340003
Tumor
0.7
CPT0078800003
Tumor
0.5
CPT0086820003
Tumor
0.5
CPT0012180003
Tumor
0.4
CPT0023350003
Tumor
0.4
CPT0079270003
Tumor
0.4
CPT0078660003
Tumor
0.4
CPT0002350011
Tumor
0.3
CPT0011410003
Tumor
0.3
CPT0077110003
Tumor
0.3
CPT0007320003
Tumor
0.3
CPT0025880003
Tumor
0.3
CPT0002270011
Tumor
0.3
CPT0079180003
Tumor
0.3
CPT0001260009
Tumor
0.3
CPT0010110003
Tumor
0.3
CPT0069160003
Tumor
0.3
CPT0025110003
Tumor
0.3
CPT0085670003
Tumor
0.2
CPT0015730003
Tumor
0.2
CPT0081880003
Tumor
0.2
CPT0065810003
Tumor
0.2
CPT0012550003
Tumor
0.2
CPT0076330003
Tumor
0.2
CPT0088690003
Tumor
0.2
CPT0012280003
Tumor
0.2
CPT0086870003
Tumor
0.2
CPT0084560003
Tumor
0.2
CPT0014450004
Tumor
0.2
CPT0078830003
Tumor
0.2
CPT0026410003
Tumor
0.2
CPT0078990003
Tumor
0.2
CPT0088480003
Tumor
0.2
CPT0017450001
Normal
0.2
CPT0024670003
Tumor
0.2
CPT0017850003
Tumor
0.2
CPT0001540009
Tumor
0.2
CPT0009060003
Tumor
0.2
CPT0065870003
Tumor
0.1
CPT0092160003
Tumor
0.1
CPT0012670003
Tumor
0.1
CPT0081600003
Tumor
0.1
CPT0012370003
Tumor
0.1
CPT0086360003
Tumor
0.1
CPT0084590001
Normal
0.1
CPT0025230003
Tumor
0.1
CPT0065430003
Tumor
0.1
CPT0001270001
Normal
0.1
CPT0001220008
Tumor
0.1
CPT0000870016
Tumor
0.1
CPT0092730003
Tumor
0.1
CPT0025290003
Tumor
0.1
CPT0086950003
Tumor
0.1
CPT0092190003
Normal
0.1
CPT0078510003
Tumor
0.1
CPT0006530001
Normal
0.1
CPT0079430001
Normal
0.1
CPT0075130003
Tumor
0.1
CPT0076350001
Normal
0.1
CPT0006440003
Tumor
0.1
CPT0000640003
Tumor
0.1
CPT0088630003
Tumor
0.1
CPT0014160003
Tumor
0.1
CPT0014370004
Tumor
0.1
CPT0077140001
Normal
0.1
CPT0020120003
Tumor
0.1
CPT0079480003
Tumor
0.1
CPT0069000003
Tumor
0.1
CPT0017410003
Tumor
0.1
CPT0013790003
Normal
0.1
CPT0092740003
Normal
0.0
CPT0092800003
Normal
0.0
CPT0012290003
Normal
0.0
CPT0025350003
Tumor
0.0
CPT0078930003
Tumor
0.0
CPT0012570003
Normal
0.0
CPT0006730001
Normal
0.0
CPT0075170001
Normal
0.0
CPT0025060001
Normal
0.0
CPT0025050003
Tumor
0.0
CPT0088920001
Normal
0.0
CPT0086970003
Normal
0.0
CPT0066430001
Normal
0.0
CPT0001190001
Normal
0.0
CPT0000790001
Normal
0.0
CPT0009080003
Normal
0.0
CPT0092310003
Normal
0.0
CPT0007860003
Tumor
0.0
CPT0088500001
Normal
0.0
CPT0012640003
Normal
0.0
CPT0087050003
Normal
0.0
CPT0012090003
Normal
0.0
CPT0075570001
Normal
0.0
CPT0089040001
Normal
0.0
CPT0077320001
Normal
0.0
CPT0063640001
Normal
0.0
CPT0082010001
Normal
0.0
CPT0025610001
Normal
0.0
CPT0086830003
Normal
0.0
CPT0075560003
Tumor
0.0
CPT0079230003
Tumor
0.0
CPT0092290003
Tumor
0.0
CPT0071150004
Tumor
0.0
CPT0018250001
Normal
0.0
CPT0065450001
Normal
0.0
CPT0014350001
Normal
0.0
CPT0010170001
Normal
0.0
CPT0007870001
Normal
0.0
CPT0064400001
Normal
0.0
CPT0078940001
Normal
0.0
CPT0081990003
Tumor
0.0
CPT0010120001
Normal
0.0
CPT0079300001
Normal
0.0
CPT0088780001
Normal
0.0
CPT0063330001
Normal
0.0
CPT0089480003
Normal
0.0
CPT0015810003
Tumor
0.0
CPT0020130001
Normal
0.0
CPT0088570001
Normal
0.0
CPT0012080003
Tumor
0.0
CPT0006950001
Normal
0.0
CPT0000890001
Normal
0.0
CPT0069190001
Normal
0.0
CPT0023710001
Normal
0.0
CPT0077500001
Normal
0.0
CPT0025170003
Tumor
0.0
CPT0088640003
Normal
0.0
CPT0026420001
Normal
0.0
CPT0002370001
Normal
0.0
CPT0001350001
Normal
0.0
CPT0009000003
Tumor
0.0
CPT0012920003
Normal
0.0
CPT0012770003
Normal
0.0
CPT0088710001
Normal
0.0
CPT0075720003
Tumor
0.0
CPT0066480003
Tumor
0.0
CPT0014130001
Normal
0.0
CPT0081620001
Normal
0.0
CPT0078840001
Normal
0.0
CPT0001230001
Normal
0.0
CPT0023360001
Normal
0.0
CPT0006900003
Tumor
0.0
CPT0065820001
Normal
0.0
CPT0086030003
Tumor
0.0
CPT0066470004
Tumor
0.0
CPT0063630003
Tumor
-0.1
CPT0079380003
Tumor
-0.1
CPT0079410003
Tumor
-0.1
CPT0066520001
Normal
-0.1
CPT0077490003
Tumor
-0.1
CPT0000660001
Normal
-0.1
CPT0007470001
Normal
-0.1
CPT0001510001
Normal
-0.1
CPT0001550001
Normal
-0.1
CPT0078670001
Normal
-0.1
CPT0025580004
Tumor
-0.1
CPT0086370003
Normal
-0.1
CPT0086890003
Normal
-0.1
CPT0065690003
Tumor
-0.1
CPT0020020001
Normal
-0.1
CPT0019160001
Normal
-0.1
CPT0079510001
Normal
-0.1
CPT0025920001
Normal
-0.1
CPT0089020003
Tumor
-0.1
CPT0019130003
Tumor
-0.1
CPT0064370003
Tumor
-0.1
CPT0014470001
Normal
-0.1
CPT0065750003
Tumor
-0.1
CPT0019990003
Tumor
-0.1
CPT0079000001
Normal
-0.1
CPT0009020003
Normal
-0.1
CPT0023690003
Tumor
-0.1
CPT0010160003
Tumor
-0.1
CPT0087040003
Tumor
-0.1
CPT0001500009
Tumor
-0.1
CPT0012900004
Tumor
-0.1
CPT0006630003
Tumor
-0.1
CPT0069010001
Normal
-0.1
CPT0021240003
Tumor
-0.1
CPT0078530001
Normal
-0.1
CPT0088760003
Tumor
-0.1
CPT0000780007
Tumor
-0.1
CPT0077310003
Tumor
-0.1
CPT0088970003
Tumor
-0.2
CPT0089460004
Tumor
-0.2
CPT0063320003
Tumor
-0.2
CPT0011240003
Tumor
-0.2
CPT0092790003
Tumor
-0.2
CPT0088900003
Tumor
-0.3
CPT0024680001
Normal
-0.3
CPT0015910003
Tumor
-0.3
CPT0065930003
Tumor
-0.3
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
