HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:25.3 nTPM
HPA Brain:17.4 nTPM
GTEx:25.3 nTPM
FANTOM5:46.4 Scaled Tags Per Million
Pig:32.2 nTPM
Mouse:27.5 nTPM
Allen mouse:0.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA057261
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 17.4
Sample id Sample description nTPM
Hippocampus
nTPM: 15.4
1898 Male, age 80, left hemisphere 19.8
1855 Male, age 76, left hemisphere 16.9
2621 Female, age 67, right hemisphere 14.9
2529 Female, age 94, left hemisphere 14.1
2148 Female, age 91, left hemisphere 13.7
1911 Female, age 85, right hemisphere 13.1
Dentate gyrus
nTPM: 16.1
2530 Female, age 94, left hemisphere 19.4
1927 Female, age 91, both hemispheres 16.8
2531 Female, age 67, both hemispheres 16.6
2246 Female, age 85, both hemispheres 14.8
2010 Male, age 76, both hemispheres 14.4
2528 Male, age 74, both hemispheres 14.4
Entorhinal gyrus
nTPM: 16.5
1938 Female, age 85, left hemisphere 18.3
2764 Male, age 80, right hemisphere 17.8
2613 Female, age 94, left hemisphere 17.5
2686 Male, age 75, right hemisphere 15.9
1787 Male, age 76, left hemisphere 15.2
2117 Female, age 91, right hemisphere 14.5
Hippocampus, CA1
nTPM: 15.8
2749 Male, age 80, left hemisphere 21.6
2527 Male, age 74, both hemispheres 15.8
1873 Female, age 85, both hemispheres 15.0
2045 Male, age 76, both hemispheres 14.8
2082 Female, age 91, right hemisphere 11.6
Hippocampus, CA2
nTPM: 17.4
1892 Male, age 76, both hemispheres 21.6
2437 Female, age 94, left hemisphere 20.6
1963 Male, age 80, left hemisphere 19.5
2249 Male, age 74, both hemispheres 15.3
1940 Female, age 85, left hemisphere 14.0
2113 Female, age 91, right hemisphere 13.7
Hippocampus, CA3
nTPM: 17.3
2436 Male, age 74, both hemispheres 22.3
2620 Female, age 94, left hemisphere 17.4
2137 Male, age 80, left hemisphere 16.7
1867 Male, age 76, both hemispheres 16.6
2861 Female, age 67, both hemispheres 15.3
1891 Female, age 85, both hemispheres 15.2
Parahippocampal cortex
nTPM: 15.1
1850 Male, age 80, both hemispheres 18.4
1990 Female, age 91, right hemisphere 17.0
2245 Female, age 91, both hemispheres 16.4
2532 Female, age 72, left hemisphere 16.0
1933 Female, age 85, both hemispheres 15.8
2692 Male, age 74, both hemispheres 13.7
2018 Male, age 76, both hemispheres 13.6
2250 Female, age 67, right hemisphere 13.5
2693 Female, age 94, both hemispheres 13.4
2622 Female, age 67, right hemisphere 13.3
Perirhinal gyrus
nTPM: 17.2
1794 Male, age 80, right hemisphere 20.6
1847 Female, age 91, left hemisphere 19.5
1841 Female, age 85, right hemisphere 18.4
2521 Female, age 94, right hemisphere 14.6
2848 Male, age 76, right hemisphere 12.7
Subiculum
nTPM: 15.0
1901 Male, age 80, both hemispheres 17.5
1977 Female, age 85, both hemispheres 16.5
2619 Male, age 74, both hemispheres 16.4
2438 Female, age 94, left hemisphere 15.9
2042 Male, age 76, both hemispheres 12.7
2729 Female, age 91, right hemisphere 11.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 25.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 25.3
Samples: 197

Max nTPM: 39.5
Min nTPM: 14.0
Std nTPM: 5.1
Median nTPM: 25.3
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 39.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 39.3
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 39.2
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 38.9
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 38.3
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 37.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 36.7
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 36.1
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 35.8
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 35.6
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 35.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 46.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 46.4
FF:10169-103B7 60 years, female 50.8
FF:10153-102I9 76 years, female 41.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 32.2
Pig sample Sample description nTPM
Subiculum
nTPM: 28.0
Samples: 4

Max nTPM: 40.0
Min nTPM: 21.8
Sample A Female 40.0
Sample B Female 23.7
Sample C Male 26.5
Sample D Male 21.8
Dorsal hippocampus
nTPM: 32.2
Samples: 4

Max nTPM: 47.2
Min nTPM: 21.5
Sample A Female 47.2
Sample B Female 27.4
Sample C Male 32.5
Sample D Male 21.5
Entorhinal cortex
nTPM: 28.1
Samples: 4

Max nTPM: 31.7
Min nTPM: 22.3
Sample A Female 29.6
Sample B Female 28.8
Sample C Male 31.7
Sample D Male 22.3
Ventral hippocampus
nTPM: 30.4
Samples: 4

Max nTPM: 36.4
Min nTPM: 21.7
Sample A Female 36.4
Sample B Female 21.7
Sample C Male 36.3
Sample D Male 27.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 27.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 24.7
Samples: 4

Max nTPM: 27.6
Min nTPM: 22.4
Sample A Male 22.4
Sample B Male 22.9
Sample C Female 25.8
Sample D Female 27.6
Hippocampal formation
nTPM: 27.5
Samples: 4

Max nTPM: 29.4
Min nTPM: 26.4
Sample A Male 26.4
Sample B Male 27.2
Sample C Female 29.4
Sample D Female 26.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
68798115 Antisense, RP_050215_01_G08, Mouse strain C57BL/6J (56 days, male) 0.5

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