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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TMEM54 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
11.3
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
74.3
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
56.4
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
49.8
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
39.0
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
37.7
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
32.6
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
28.7
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
27.6
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
24.8
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
23.0
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
20.9
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
17.3
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
16.8
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
15.6
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
15.5
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
15.4
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
14.6
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
13.6
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
13.5
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
13.2
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
13.1
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
11.5
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
11.5
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
11.0
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
10.0
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
9.3
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
8.8
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
8.7
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
8.3
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
8.1
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
8.1
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
7.7
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
7.6
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
7.3
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
6.4
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
5.9
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
5.9
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
5.0
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
3.2
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
2.6
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
2.2
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
2.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
1.9
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
1.8
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
1.6
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
1.3
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
1.2
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
1.2
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
1.1
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
1.0
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
0.8
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
0.7
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
0.7
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
0.3
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
0.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
0.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
0.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
0.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
0.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
0.0
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
0.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
0.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
0.0
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TMEM54 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
47.3
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
206.3
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
188.2
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
181.4
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
179.2
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
173.8
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
165.9
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
160.7
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
151.0
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
142.5
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
139.0
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
128.8
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
122.6
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
119.7
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
115.2
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
114.7
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
113.6
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
112.3
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
110.2
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
109.2
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
107.2
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
106.2
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
106.0
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
105.3
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
102.9
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
102.9
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
102.3
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
102.2
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
102.2
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
102.2
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
100.6
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
99.6
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
99.2
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
99.0
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
98.2
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
96.4
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
95.8
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
95.7
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
95.0
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
93.8
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
92.9
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
91.2
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
91.1
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
91.0
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
90.8
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
89.5
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
88.3
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
87.9
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
86.8
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
86.3
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
85.3
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
83.1
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
83.1
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
82.9
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
82.3
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
82.1
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
81.6
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
81.2
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
80.9
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
80.5
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
80.4
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
80.3
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
80.2
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
79.8
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
79.1
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
78.6
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
78.3
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
76.9
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
76.8
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
76.3
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
76.1
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
75.8
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
75.3
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
74.8
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
74.8
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
74.4
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
74.0
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
73.9
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
73.1
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
73.0
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
72.5
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
72.4
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
72.0
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
72.0
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
71.2
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
71.2
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
71.0
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
70.7
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
70.5
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
70.4
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
70.0
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
69.8
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
69.7
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
69.3
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
69.2
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
69.1
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
69.1
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
69.1
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
69.0
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
68.6
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
68.5
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
68.4
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
68.4
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
67.8
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
67.6
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
66.2
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
66.0
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
65.6
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
65.4
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
64.8
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
64.4
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
64.4
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
63.9
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
63.6
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
63.5
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
63.5
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
63.2
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
62.9
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
62.1
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
62.1
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
62.0
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
62.0
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
61.8
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
61.6
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
61.4
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
61.3
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
60.9
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
60.4
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
60.3
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
60.2
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
59.7
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
59.6
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
58.6
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
58.4
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
58.2
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
57.6
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
57.6
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
57.5
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
56.3
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
56.2
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
56.1
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
56.0
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
55.9
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
55.7
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
55.6
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
55.4
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
55.4
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
55.3
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
55.1
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
54.8
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
54.6
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
54.6
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
54.1
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
54.1
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
54.1
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
54.1
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
53.9
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
53.8
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
53.1
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
53.1
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
52.9
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
52.7
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
52.6
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
52.6
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
52.5
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
52.5
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
52.5
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
52.4
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
52.1
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
52.0
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
52.0
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
51.9
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
51.4
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
51.4
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
51.3
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
51.1
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
50.9
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
50.9
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
50.9
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
50.8
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
50.8
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
50.6
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
50.4
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
50.2
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
50.1
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
50.0
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
49.9
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
49.9
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
49.7
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
49.6
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
49.6
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
49.5
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
49.5
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
49.4
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
49.4
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
49.4
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
49.4
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
49.3
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
49.1
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
48.7
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
48.6
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
48.6
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
48.4
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
48.1
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
47.9
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
47.9
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
47.7
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
47.7
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
47.4
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
47.2
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
46.8
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
46.6
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
46.5
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
46.2
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
46.2
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
46.1
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
46.1
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
45.8
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
45.5
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
45.3
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
45.3
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
45.2
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
45.0
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
45.0
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
44.8
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
44.7
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
44.7
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
44.7
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
44.5
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
44.4
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
44.2
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
44.1
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
44.0
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
43.7
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
43.5
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
43.4
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
43.3
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
43.2
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
43.1
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
43.0
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
43.0
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
42.9
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
42.8
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
42.7
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
42.4
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
42.4
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
42.4
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
42.4
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
42.4
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
42.3
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
42.2
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
41.9
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
41.7
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
41.6
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
41.5
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
41.4
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
41.4
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
41.3
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
41.3
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
41.2
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
41.2
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
41.1
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
41.1
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
41.1
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
41.0
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
40.4
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
40.3
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
40.3
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
40.1
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
40.1
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
40.1
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
39.7
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
39.6
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
39.5
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
39.5
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
39.3
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
39.2
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
39.2
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
39.2
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
38.8
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
38.8
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
38.6
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
38.5
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
38.5
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
38.4
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
38.4
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
38.3
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
38.3
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
38.0
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
37.8
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
37.8
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
37.7
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
37.6
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
37.4
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
37.3
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
37.2
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
37.2
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
37.0
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
37.0
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
36.9
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
36.9
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
36.8
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
36.7
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
36.7
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
36.7
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
36.7
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
36.6
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
36.6
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
36.4
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
36.4
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
36.4
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
36.0
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
35.9
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
35.7
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
35.7
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
35.6
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
35.4
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
35.2
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
35.2
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
35.1
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
35.0
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
35.0
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
35.0
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
34.9
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
34.9
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
34.8
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
34.8
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
34.8
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
34.6
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
34.6
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
34.5
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
34.5
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
34.4
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
34.3
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
34.1
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
34.1
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
33.8
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
33.6
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
33.5
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
33.4
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
33.3
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
33.3
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
33.2
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
33.2
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
33.1
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
33.1
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
33.1
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
32.8
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
32.8
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
32.8
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
32.7
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
32.7
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
32.6
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
32.6
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
32.5
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
32.5
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
32.2
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
32.1
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
32.0
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
32.0
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
31.9
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
31.9
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
31.9
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
31.8
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
31.3
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
31.1
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
31.1
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
31.0
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
31.0
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
30.9
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
30.6
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
30.6
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
30.4
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
30.1
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
30.0
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
30.0
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
29.7
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
29.6
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
29.6
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
28.9
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
28.9
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
28.9
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
28.9
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
28.7
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
28.6
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
28.6
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
28.5
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
28.5
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
28.2
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
28.1
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
28.0
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
27.7
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
27.4
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
27.3
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
27.2
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
27.0
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
26.9
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
26.8
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
26.6
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
26.6
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
26.3
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
26.2
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
26.2
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
26.2
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
26.1
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
26.1
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
26.1
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
26.0
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
25.7
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
25.5
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
25.4
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
25.3
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
25.3
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
25.2
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
25.1
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
25.0
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
24.9
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
24.9
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
24.8
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
24.7
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
24.4
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
24.4
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
24.3
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
24.2
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
24.0
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
23.9
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
23.6
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
23.5
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
23.4
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
23.3
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
23.2
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
23.0
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
23.0
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
22.8
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
22.7
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
22.7
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
22.6
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
22.6
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
22.5
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
22.4
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
22.4
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
22.3
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
22.2
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
22.2
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
22.0
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
21.9
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
21.7
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
21.3
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
21.1
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
21.1
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
21.0
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
20.9
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
20.9
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
20.8
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
20.7
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
20.5
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
20.5
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
20.4
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
20.3
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
20.1
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
20.0
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
20.0
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
19.7
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
19.5
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
19.5
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
19.4
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
19.3
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
19.0
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
18.7
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
18.3
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
17.7
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
17.6
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
17.5
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
17.5
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
17.4
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
16.8
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
16.6
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
16.6
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
16.3
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
16.1
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
16.0
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
15.8
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
15.3
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
15.2
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
15.1
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
14.8
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
14.6
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
14.5
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
14.2
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
14.1
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
14.0
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
13.9
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
13.9
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
13.4
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
13.3
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
13.0
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
12.8
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
12.7
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
12.2
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
11.3
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
11.1
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
11.0
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
10.8
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
10.0
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
9.4
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
9.0
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
8.2
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
8.1
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
8.1
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
7.5
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
6.6
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
6.4
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
5.4
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
5.0
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
4.2
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
3.9
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
2.9
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
2.4
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
1.5
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
0.7
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
0.7
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TMEM54 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
58.9
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
275.4
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
126.3
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
125.3
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
125.2
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
116.4
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
113.8
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
113.3
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
111.0
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
111.0
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
108.2
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
106.3
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
105.1
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
103.2
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
102.7
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
101.3
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
98.6
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
96.7
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
95.8
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
95.8
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
93.6
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
92.6
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
92.3
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
84.0
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
81.8
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
80.7
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
80.5
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
80.5
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
77.5
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
76.2
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
74.2
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
73.8
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
73.8
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
71.2
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
70.7
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
69.4
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
68.7
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
67.6
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
67.2
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
66.6
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
66.0
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
65.6
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
59.0
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
55.7
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
54.0
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
53.3
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
53.0
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
52.9
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
50.7
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
49.6
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
49.1
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
48.4
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
47.2
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
47.2
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
47.1
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
44.0
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
43.5
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
41.8
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
41.8
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
41.5
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
41.3
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
40.7
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
40.3
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
40.1
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
39.2
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
37.9
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
37.2
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
36.7
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
36.6
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
36.1
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
35.7
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
35.0
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
33.4
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
32.6
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
32.6
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
32.5
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
32.0
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
31.8
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
31.6
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
30.2
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
29.7
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
28.8
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
26.4
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
26.0
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
24.8
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
24.6
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
23.6
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
23.1
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
21.2
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
17.4
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
17.4
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
17.1
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
17.0
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
16.1
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
15.0
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
14.7
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
12.3
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
10.9
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
10.8
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
9.9
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TMEM54 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
101.1
Number of samples
282
Samples
Sample
Description
TPM
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
401.9
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
272.9
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
271.9
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
271.7
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
243.9
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
243.5
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
243.1
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
217.7
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
213.6
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
208.8
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
207.6
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
204.0
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
196.7
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
194.3
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
186.9
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
186.8
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
180.0
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
179.2
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
178.7
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
178.2
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
174.6
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
173.0
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
172.2
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
171.8
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
171.1
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
168.5
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
167.4
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
166.5
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
164.9
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
163.3
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
162.3
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
160.8
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
159.4
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
158.9
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
158.5
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
158.2
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
157.5
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
157.3
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
156.4
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
153.0
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
152.3
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
151.4
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
151.1
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
149.6
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
149.5
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
148.5
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
147.9
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
146.2
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
146.1
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
145.6
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
145.4
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
144.6
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
144.2
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
142.6
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
141.9
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
141.5
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
140.2
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
140.2
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
140.1
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
139.7
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
139.7
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
137.8
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
137.7
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
137.4
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
135.9
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
134.0
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
131.8
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
130.7
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
130.1
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
130.0
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
129.9
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
129.8
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
129.8
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
129.8
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
128.3
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
127.8
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
127.0
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
125.7
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
125.2
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
125.2
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
125.0
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
124.6
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
124.3
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
123.7
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
123.2
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
122.6
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
122.3
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
122.0
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
121.7
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
121.5
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
121.2
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
121.0
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
120.1
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
119.8
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
119.5
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
118.1
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
117.8
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
117.5
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
117.4
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
117.3
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
117.2
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
117.2
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
114.5
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
113.8
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
113.6
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
113.1
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
112.9
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
112.6
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
112.5
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
112.3
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
108.6
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
108.3
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
107.5
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
107.3
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
107.1
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
107.0
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
106.5
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
106.5
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
105.9
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
105.8
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
105.8
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
105.7
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
105.6
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
105.1
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
104.3
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
104.1
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
103.8
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
103.0
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
102.7
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
102.7
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
101.3
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
101.3
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
101.2
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
100.3
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
99.8
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
99.5
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
99.4
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
99.0
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
98.2
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
97.3
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
97.1
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
96.8
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
96.0
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
95.9
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
95.5
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
95.0
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
94.9
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
94.3
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
94.0
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
93.5
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
93.0
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
90.9
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
89.7
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
89.6
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
89.5
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
89.1
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
88.8
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
88.2
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
88.2
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
87.4
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
87.1
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
86.3
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
85.8
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
85.6
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
85.2
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
84.9
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
84.9
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
84.3
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
84.0
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
82.5
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
82.5
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
82.1
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
81.8
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
81.6
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
79.8
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
79.7
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
79.7
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
79.3
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
78.9
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
78.8
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
78.0
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
76.5
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
76.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
74.1
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
74.0
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
73.8
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
73.4
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
72.8
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
71.6
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
70.9
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
70.5
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
70.4
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
70.3
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
70.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
69.1
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
69.0
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
68.5
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
67.9
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
67.2
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
67.2
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
65.1
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
64.2
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
63.6
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
63.5
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
63.4
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
62.2
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
62.0
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
61.9
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
61.4
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
61.2
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
61.1
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
60.6
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
60.2
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
60.1
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
60.0
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
59.7
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
58.9
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
58.8
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
58.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
58.0
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
57.8
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
57.6
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
57.6
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
56.4
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
55.9
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
54.6
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
54.5
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
53.5
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
52.2
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
51.9
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
51.7
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
51.2
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
51.1
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
50.6
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
50.5
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
50.0
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
49.2
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
49.0
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
48.8
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
48.6
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
48.3
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
47.7
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
47.3
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
46.7
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
46.2
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
45.4
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
45.1
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
45.0
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
44.1
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
42.8
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
42.0
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
42.0
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
40.9
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
40.6
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
40.1
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
39.4
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
38.9
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
38.5
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
38.3
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
38.3
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
36.7
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
35.9
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
35.9
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
35.4
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
34.3
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
33.1
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
31.9
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
30.9
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
26.7
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
24.3
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
22.8
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
20.8
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
17.7
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
17.7
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
16.2
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
14.5
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
14.2
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
12.6
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
12.2
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
11.0
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
7.5
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0026410003
Tumor
N/A
CPT0002370001
Normal
N/A
CPT0000790001
Normal
N/A
CPT0019130003
Tumor
N/A
CPT0088570001
Normal
N/A
CPT0065820001
Normal
N/A
CPT0025880003
Tumor
N/A
CPT0076330003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0078800003
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0078930003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0084560003
Tumor
N/A
CPT0012670003
Tumor
N/A
CPT0002350011
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0064370003
Tumor
N/A
CPT0088900003
Tumor
N/A
CPT0006730001
Normal
N/A
CPT0007870001
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0079380003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0012640003
Normal
N/A
CPT0078830003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0089020003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0092790003
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0063330001
Normal
N/A
CPT0001350001
Normal
N/A
CPT0078940001
Normal
N/A
CPT0086830003
Normal
N/A
CPT0088760003
Tumor
N/A
CPT0092190003
Normal
N/A
CPT0002270011
Tumor
N/A
CPT0088550004
Tumor
N/A
CPT0023710001
Normal
N/A
CPT0077140001
Normal
N/A
CPT0025230003
Tumor
N/A
CPT0025050003
Tumor
N/A
CPT0075720003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0089040001
Normal
N/A
CPT0017850003
Tumor
N/A
CPT0019990003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0001510001
Normal
N/A
CPT0078840001
Normal
N/A
CPT0010110003
Tumor
N/A
CPT0086890003
Normal
N/A
CPT0092290003
Tumor
N/A
CPT0020120003
Tumor
N/A
CPT0088640003
Normal
N/A
CPT0088500001
Normal
N/A
CPT0069010001
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0063630003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0014350001
Normal
N/A
CPT0014470001
Normal
N/A
CPT0086360003
Tumor
N/A
CPT0069160003
Tumor
N/A
CPT0006950001
Normal
N/A
CPT0007860003
Tumor
N/A
CPT0082010001
Normal
N/A
CPT0079230003
Tumor
N/A
CPT0001340003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0012080003
Tumor
N/A
CPT0084590001
Normal
N/A
CPT0063640001
Normal
N/A
CPT0009000003
Tumor
N/A
CPT0010170001
Normal
N/A
CPT0079270003
Tumor
N/A
CPT0069190001
Normal
N/A
CPT0001270001
Normal
N/A
CPT0015810003
Tumor
N/A
CPT0025110003
Tumor
N/A
CPT0024680001
Normal
N/A
CPT0012090003
Normal
N/A
CPT0009020003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0077490003
Tumor
N/A
CPT0014160003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0020020001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0001500009
Tumor
N/A
CPT0081600003
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0088630003
Tumor
N/A
CPT0069000003
Tumor
N/A
CPT0088710001
Normal
N/A
CPT0092160003
Tumor
N/A
CPT0006630003
Tumor
N/A
CPT0001260009
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0012180003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0075570001
Normal
N/A
CPT0014130001
Normal
N/A
CPT0078510003
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0079000001
Normal
N/A
CPT0092800003
Normal
N/A
CPT0006900003
Tumor
N/A
CPT0015910003
Tumor
N/A
CPT0020130001
Normal
N/A
CPT0089480003
Normal
N/A
CPT0007470001
Normal
N/A
CPT0064400001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0092730003
Tumor
N/A
CPT0077110003
Tumor
N/A
CPT0086030003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0018250001
Normal
N/A
CPT0017450001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0077500001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0006530001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0019160001
Normal
N/A
CPT0081620001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0078670001
Normal
N/A
CPT0089460004
Tumor
N/A
CPT0007320003
Tumor
N/A
CPT0088690003
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0025920001
Normal
N/A
CPT0076350001
Normal
N/A
CPT0015730003
Tumor
N/A
CPT0025350003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0012280003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0079410003
Tumor
N/A
CPT0075560003
Tumor
N/A
CPT0001230001
Normal
N/A
CPT0079510001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0078990003
Tumor
N/A
CPT0065810003
Tumor
N/A
CPT0010120001
Normal
N/A
CPT0086870003
Tumor
N/A
CPT0075170001
Normal
N/A
CPT0000640003
Tumor
N/A
CPT0065870003
Tumor
N/A
CPT0088780001
Normal
N/A
CPT0086970003
Normal
N/A
CPT0079300001
Normal
N/A
CPT0092740003
Normal
N/A
CPT0085670003
Tumor
N/A
CPT0081880003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0012290003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0023690003
Tumor
N/A
CPT0001220008
Tumor
N/A
CPT0088480003
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0079430001
Normal
N/A
CPT0000890001
Normal
N/A
CPT0086370003
Normal
N/A
CPT0025580004
Tumor
N/A
CPT0081990003
Tumor
N/A
CPT0025060001
Normal
N/A
CPT0075130003
Tumor
N/A
CPT0000660001
Normal
N/A
CPT0086820003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
