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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CSTA is not prognostic in Cervical Squamous Cell Carcinoma and Endocervical Adenocarcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
666.9
Number of samples
283
Samples
Sample
Description
TPM
TCGA-JX-A5QV-01A
0 years, female, white, stage:Stage IB, alive, 636 days
6000.7
TCGA-C5-A901-01A
0 years, female, white, stage:'--, alive, 518 days
5621.8
TCGA-EK-A2RE-01A
0 years, female, white, stage:Stage IIA, alive, 57 days
4526.6
TCGA-FU-A3NI-01A
0 years, female, white, stage:Stage IB, dead, 638 days
3989.3
TCGA-EA-A3HT-01A
0 years, female, white, stage:Stage IB, alive, 954 days
3477.4
TCGA-VS-A8EG-01A
0 years, female, stage:Stage IB, alive, 1386 days
3003.9
TCGA-VS-A9UU-01A
0 years, female, stage:Stage IIB, alive, 442 days
2779.3
TCGA-C5-A905-01A
0 years, female, black or african american, stage:Stage IB, alive, 4879 days
2677.5
TCGA-VS-A8Q8-01A
0 years, female, white, stage:Stage IB, dead, 978 days
2585.9
TCGA-C5-A1M5-01A
0 years, female, white, stage:Stage IB, dead, 2052 days
2494.1
TCGA-DG-A2KL-01A
0 years, female, stage:Stage IIA, alive, 1367 days
2430.3
TCGA-MA-AA3X-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 617 days
2419.7
TCGA-EA-A1QT-01A
0 years, female, white, stage:Stage IB, alive, 1243 days
2409.7
TCGA-C5-A1M8-01A
0 years, female, white, stage:Stage IB, alive, 919 days
2379.6
TCGA-FU-A5XV-01A
0 years, female, white, stage:Stage IIIB, alive, 321 days
2313.8
TCGA-C5-A7UE-01A
0 years, female, white, stage:Stage IB, alive, 4738 days
2279.8
TCGA-C5-A7UH-01A
0 years, female, white, stage:Stage IIIB, alive, 3988 days
2211.1
TCGA-ZJ-AAXA-01A
0 years, female, white, stage:Stage IB, alive, 43 days
2195.6
TCGA-VS-A9UI-01A
0 years, female, white, stage:Stage IIB, dead, 1372 days
2185.6
TCGA-IR-A3LC-01A
0 years, female, white, stage:Stage IB, alive, 3935 days
2126.3
TCGA-C5-A1MH-01A
0 years, female, white, stage:Stage IIIB, dead, 1186 days
2000.2
TCGA-C5-A2LZ-01A
0 years, female, white, stage:Stage IIIB, dead, 3046 days
1999.7
TCGA-EK-A2RN-01A
0 years, female, white, stage:Stage IB, alive, 71 days
1926.1
TCGA-MU-A51Y-01A
0 years, female, white, stage:Stage IIA, alive, 854 days
1922.3
TCGA-XS-A8TJ-01A
0 years, female, black or african american, stage:Stage IB, alive, 890 days
1915.2
TCGA-FU-A3YQ-01A
0 years, female, white, stage:Stage IB, alive, 861 days
1852.0
TCGA-UC-A7PG-01A
0 years, female, white, stage:Stage IIIB, dead, 370 days
1786.7
TCGA-EA-A3QE-01A
0 years, female, white, stage:Stage IB, alive, 761 days
1762.6
TCGA-EA-A3HR-01A
0 years, female, white, stage:Stage II, alive, 940 days
1731.5
TCGA-C5-A1MK-01A
0 years, female, white, stage:Stage IIIB, dead, 74 days
1674.9
TCGA-ZJ-A8QQ-01A
0 years, female, white, stage:Stage IIB, alive, 2056 days
1674.4
TCGA-EA-A5ZD-01A
0 years, female, asian, stage:Stage IB, alive, 830 days
1606.0
TCGA-MA-AA42-01A
0 years, female, white, stage:Stage IIB, alive, 259 days
1603.8
TCGA-ZJ-A8QR-01A
0 years, female, native hawaiian or other pacific islander, stage:Stage I, dead, 582 days
1596.1
TCGA-C5-A3HL-01A
0 years, female, white, stage:Stage IB, alive, 621 days
1588.3
TCGA-FU-A3TQ-01A
0 years, female, white, stage:Stage IIIB, alive, 795 days
1556.7
TCGA-VS-A950-01A
0 years, female, stage:Stage IIIA, alive, 1221 days
1555.3
TCGA-Q1-A6DW-01A
0 years, female, white, stage:Stage I, alive, 534 days
1536.4
TCGA-MA-AA3Z-01A
0 years, female, white, stage:Stage IB, alive, 595 days
1532.2
TCGA-C5-A1MN-01A
0 years, female, white, stage:Stage IIIB, dead, 1245 days
1515.1
TCGA-VS-A957-01A
0 years, female, white, stage:Stage IB, alive, 1688 days
1496.3
TCGA-FU-A3HY-01A
0 years, female, white, stage:Stage IB, alive, 954 days
1474.1
TCGA-EA-A5O9-01A
0 years, female, white, stage:Stage IB, alive, 788 days
1453.7
TCGA-MU-A8JM-01A
0 years, female, white, stage:Stage IB, alive, 607 days
1422.1
TCGA-EK-A2RO-01A
0 years, female, american indian or alaska native, stage:Stage IIB, alive, 2 days
1404.1
TCGA-VS-A8QC-01A
0 years, female, white, stage:Stage IVA, dead, 350 days
1392.4
TCGA-C5-A7CL-01A
0 years, female, white, stage:Stage IIIB, dead, 471 days
1384.1
TCGA-DS-A3LQ-01A
0 years, female, stage:Stage IIIB, alive, 699 days
1379.1
TCGA-EK-A2RB-01A
0 years, female, white, stage:Stage IVB, alive, 9 days
1350.1
TCGA-JW-A5VL-01A
0 years, female, american indian or alaska native, stage:Stage IB, alive, 474 days
1294.6
TCGA-C5-A1BM-01A
0 years, female, black or african american, stage:Stage IB, dead, 2520 days
1281.3
TCGA-C5-A8YQ-01A
0 years, female, white, stage:Stage IB, dead, 715 days
1235.3
TCGA-EX-A69M-01A
0 years, female, white, stage:Stage IB, dead, 253 days
1212.7
TCGA-C5-A1M7-01A
0 years, female, white, stage:Stage IB, alive, 1409 days
1184.2
TCGA-ZJ-AAX4-01A
0 years, female, white, stage:Stage II, alive, 21 days
1180.0
TCGA-Q1-A73Q-01A
0 years, female, white, stage:Stage I, alive, 284 days
1178.7
TCGA-C5-A7CH-01A
0 years, female, white, stage:Stage IIB, alive, 4694 days
1163.4
TCGA-EK-A2H0-01A
0 years, female, white, stage:Stage IIB, alive, 1847 days
1158.8
TCGA-C5-A7XC-01A
0 years, female, white, stage:Stage IB, alive, 1551 days
1138.0
TCGA-ZJ-AAXU-01A
0 years, female, white, stage:Stage IIB, alive, 5 days
1117.8
TCGA-EA-A97N-01A
0 years, female, white, stage:Stage IB, alive, 11 days
1108.4
TCGA-DS-A1OA-01A
0 years, female, asian, stage:Stage IB, dead, 879 days
1101.2
TCGA-DS-A5RQ-01A
0 years, female, white, stage:Stage IB, alive, 512 days
1060.0
TCGA-JW-AAVH-01A
0 years, female, white, stage:Stage IB, alive, 552 days
1046.2
TCGA-JX-A3Q0-01A
0 years, female, black or african american, stage:Stage III, alive, 6375 days
1016.0
TCGA-EK-A2IP-01A
0 years, female, white, stage:Stage IB, alive, 202 days
1011.1
TCGA-VS-A9UV-01A
0 years, female, stage:Stage IVA, dead, 104 days
996.9
TCGA-EK-A2PL-01A
0 years, female, white, stage:Stage IIIB, alive, 13 days
994.4
TCGA-EX-A1H5-01A
0 years, female, black or african american, stage:Stage IIB, alive, 619 days
991.3
TCGA-DS-A0VN-01A
0 years, female, white, stage:Stage IB, alive, 3609 days
977.4
TCGA-EA-A50E-01A
0 years, female, asian, stage:Stage IVA, dead, 227 days
962.6
TCGA-Q1-A5R2-01A
0 years, female, white, stage:'--, alive, 499 days
940.1
TCGA-VS-A9UC-01A
0 years, female, stage:Stage IIB, alive, 825 days
938.8
TCGA-JX-A3PZ-01A
0 years, female, white, stage:Stage IB, dead, 642 days
933.4
TCGA-FU-A2QG-01A
0 years, female, white, stage:Stage IB, alive, 579 days
897.5
TCGA-DS-A0VK-01A
0 years, female, white, stage:Stage IB, dead, 1118 days
886.5
TCGA-IR-A3L7-01A
0 years, female, white, stage:Stage IB, alive, 4483 days
876.7
TCGA-VS-A8EK-01A
0 years, female, white, stage:Stage IVA, dead, 829 days
846.4
TCGA-VS-A8EI-01A
0 years, female, white, stage:Stage IIB, alive, 729 days
827.1
TCGA-HG-A2PA-01A
0 years, female, white, stage:Stage IB, dead, 773 days
815.9
TCGA-EA-A78R-01A
0 years, female, asian, stage:Stage IB, alive, 410 days
798.3
TCGA-LP-A4AU-01A
0 years, female, asian, stage:Stage IIIB, alive, 343 days
793.3
TCGA-JW-A852-01A
0 years, female, white, stage:Stage IIB, dead, 252 days
790.0
TCGA-EA-A3HQ-01A
0 years, female, white, stage:Stage II, alive, 1136 days
756.8
TCGA-EA-A411-01A
0 years, female, white, stage:Stage IB, alive, 747 days
752.5
TCGA-VS-A9V3-01A
0 years, female, white, stage:Stage IVB, alive, 540 days
742.3
TCGA-DS-A1OC-01A
0 years, female, white, stage:Stage IB, alive, 376 days
726.4
TCGA-IR-A3LL-01A
0 years, female, white, stage:Stage IB, alive, 1106 days
724.7
TCGA-JW-A5VK-01A
0 years, female, black or african american, stage:Stage IB, alive, 623 days
708.1
TCGA-MA-AA43-01A
0 years, female, white, stage:Stage IIIB, alive, 346 days
702.7
TCGA-Q1-A5R3-01A
0 years, female, white, stage:'--, alive, 485 days
691.4
TCGA-MA-AA3Y-01A
0 years, female, white, stage:Stage IB, alive, 542 days
682.8
TCGA-C5-A1BJ-01A
0 years, female, white, stage:Stage IIB, alive, 4385 days
679.9
TCGA-VS-A8QM-01A
0 years, female, stage:Stage IVB, dead, 951 days
675.3
TCGA-FU-A3TX-01A
0 years, female, stage:Stage IB, alive, 45 days
670.6
TCGA-EK-A2GZ-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 383 days
662.1
TCGA-C5-A1MP-01A
0 years, female, black or african american, stage:Stage IB, alive, 109 days
656.6
TCGA-DS-A0VL-01A
0 years, female, white, stage:Stage IB, dead, 1692 days
650.1
TCGA-DS-A7WI-01A
0 years, female, white, stage:Stage IIA, dead, 252 days
639.3
TCGA-Q1-A73O-01A
0 years, female, stage:Stage IB, alive, 428 days
636.2
TCGA-MA-AA41-01A
0 years, female, white, stage:Stage IIB, alive, 279 days
629.0
TCGA-4J-AA1J-01A
0 years, female, white, stage:Stage IB, alive, 542 days
627.2
TCGA-JW-A5VJ-01A
0 years, female, american indian or alaska native, stage:Stage IIB, alive, 652 days
623.9
TCGA-LP-A5U3-01A
0 years, female, asian, stage:Stage IB, alive, 25 days
611.7
TCGA-VS-A8EC-01A
0 years, female, white, stage:Stage IIIB, alive, 1415 days
594.2
TCGA-DR-A0ZM-01A
0 years, female, white, stage:Stage IIIB, alive, 1791 days
584.2
TCGA-VS-A954-01A
0 years, female, stage:Stage IIIB, alive, 1714 days
581.1
TCGA-MY-A5BF-01A
0 years, female, white, stage:Stage IIA, alive, 634 days
562.9
TCGA-VS-A8QA-01A
0 years, female, stage:Stage IB, alive, 1099 days
562.4
TCGA-C5-A2LY-01A
0 years, female, white, stage:Stage IB, alive, 2383 days
557.1
TCGA-C5-A1BL-01A
0 years, female, white, stage:Stage IB, alive, 5271 days
540.1
TCGA-UC-A7PD-01A
0 years, female, american indian or alaska native, stage:Stage IB, dead, 355 days
527.0
TCGA-EA-A44S-01A
0 years, female, white, stage:Stage IIIB, alive, 369 days
526.9
TCGA-UC-A7PF-01A
0 years, female, stage:Stage IB, dead, 2859 days
525.3
TCGA-C5-A7CG-01A
0 years, female, white, stage:Stage IB, alive, 6408 days
521.8
TCGA-BI-A0VR-01A
0 years, female, white, stage:Stage IIIB, alive, 1505 days
512.3
TCGA-DR-A0ZL-01A
0 years, female, asian, stage:Stage IB, alive, 2669 days
512.2
TCGA-FU-A23L-01A
0 years, female, white, stage:Stage IIA, alive, 725 days
508.5
TCGA-C5-A1ML-01A
0 years, female, white, stage:Stage IB, dead, 636 days
492.8
TCGA-VS-A9U6-01A
0 years, female, white, stage:Stage IVB, alive, 1320 days
476.7
TCGA-LP-A4AW-01A
0 years, female, asian, stage:Stage IA, alive, 27 days
476.4
TCGA-VS-AA62-01A
0 years, female, white, stage:Stage IIB, dead, 469 days
474.5
TCGA-DG-A2KM-01A
0 years, female, stage:Stage IB, alive, 1946 days
473.6
TCGA-VS-A9U7-01A
0 years, female, white, stage:Stage IB, alive, 1472 days
471.4
TCGA-VS-A8QF-01A
0 years, female, white, stage:Stage IIB, alive, 1800 days
469.7
TCGA-C5-A8XK-01A
0 years, female, black or african american, stage:'--, alive, 3039 days
468.7
TCGA-C5-A7CJ-01A
0 years, female, white, stage:Stage IIA, dead, 3097 days
457.7
TCGA-VS-A8EH-01A
0 years, female, stage:Stage IIIB, alive, 986 days
455.5
TCGA-C5-A7CO-01A
0 years, female, white, stage:Stage IB, alive, 4482 days
455.1
TCGA-BI-A20A-01A
0 years, female, white, stage:Stage IB, alive, 720 days
452.7
TCGA-HM-A4S6-01A
0 years, female, white, stage:Stage IIIB, alive, 454 days
447.1
TCGA-VS-A94Y-01A
0 years, female, white, stage:Stage IIB, dead, 144 days
421.7
TCGA-EK-A2PM-01A
0 years, female, white, stage:Stage IIB, alive, 18 days
416.9
TCGA-VS-A8EL-01A
0 years, female, black or african american, stage:Stage IIB, alive, 1992 days
416.0
TCGA-FU-A3WB-01A
0 years, female, white, stage:Stage IIA, alive, 491 days
414.4
TCGA-EK-A2PG-01A
0 years, female, black or african american, stage:'--, alive, 46 days
411.6
TCGA-VS-A8EB-01A
0 years, female, white, stage:Stage IIIB, dead, 305 days
400.8
TCGA-EX-A69L-01A
0 years, female, asian, stage:Stage IB, alive, 602 days
399.4
TCGA-R2-A69V-01A
0 years, female, white, stage:Stage IB, alive, 596 days
391.5
TCGA-ZX-AA5X-01A
0 years, female, white, stage:Stage IIIB, alive, 119 days
386.6
TCGA-C5-A8XI-01A
0 years, female, black or african american, stage:Stage IB, alive, 254 days
385.7
TCGA-WL-A834-01A
0 years, female, white, stage:'--, alive, 791 days
385.1
TCGA-C5-A7X5-01A
0 years, female, black or african american, stage:Stage IVB, dead, 414 days
383.4
TCGA-EK-A2RC-01A
0 years, female, stage:Stage IB, alive, 129 days
380.0
TCGA-VS-A9V2-01A
0 years, female, white, stage:Stage IB, alive, 555 days
377.7
TCGA-VS-A8Q9-01A
0 years, female, white, stage:Stage IB, alive, 1630 days
367.6
TCGA-EA-A3HS-01A
0 years, female, white, stage:Stage IB, alive, 959 days
356.3
TCGA-EK-A2IR-01A
0 years, female, white, stage:Stage IB, alive, 3442 days
347.4
TCGA-VS-A9U5-01A
0 years, female, white, stage:Stage IIB, alive, 1535 days
341.7
TCGA-HM-A3JK-01A
0 years, female, white, stage:Stage IIA, alive, 632 days
339.6
TCGA-RA-A741-01A
0 years, female, white, stage:Stage IIB, alive, 444 days
336.9
TCGA-VS-A94W-01A
0 years, female, white, stage:Stage IIB, alive, 1243 days
329.2
TCGA-EA-A5FO-01A
0 years, female, white, stage:Stage IB, alive, 815 days
328.3
TCGA-C5-A2LX-01A
0 years, female, white, stage:Stage IB, alive, 2526 days
317.1
TCGA-LP-A4AX-01A
0 years, female, asian, stage:Stage IB, alive, 380 days
313.2
TCGA-VS-A9UY-01A
0 years, female, stage:Stage IVB, dead, 555 days
311.0
TCGA-VS-A9UH-01A
0 years, female, black or african american, stage:Stage IVA, alive, 1427 days
303.0
TCGA-JW-A5VI-01A
0 years, female, american indian or alaska native, stage:Stage IIB, alive, 747 days
302.2
TCGA-VS-A94X-01A
0 years, female, black or african american, stage:Stage IIB, dead, 506 days
299.1
TCGA-C5-A8ZZ-01A
0 years, female, white, stage:Stage IIB, alive, 636 days
287.3
TCGA-VS-A953-01A
0 years, female, stage:Stage IVA, dead, 477 days
282.9
TCGA-EA-A3HU-01A
0 years, female, white, stage:Stage II, alive, 1013 days
279.2
TCGA-EA-A6QX-01A
0 years, female, asian, stage:Stage IIIB, alive, 730 days
267.7
TCGA-MU-A5YI-01A
0 years, female, black or african american, stage:Stage IA, alive, 1053 days
267.2
TCGA-C5-A3HF-01A
0 years, female, white, stage:Stage IB, dead, 543 days
257.5
TCGA-EK-A2PI-01A
0 years, female, white, stage:Stage IIIB, alive, 586 days
250.3
TCGA-VS-A9UM-01A
0 years, female, black or african american, stage:Stage IVB, dead, 829 days
249.2
TCGA-C5-A7CK-01A
0 years, female, white, stage:Stage IVA, dead, 4086 days
245.2
TCGA-DS-A1O9-01A
0 years, female, white, stage:Stage IVA, dead, 266 days
243.1
TCGA-EK-A3GJ-01A
0 years, female, native hawaiian or other pacific islander, stage:Stage IB, alive, 3 days
234.9
TCGA-VS-A9UD-01A
0 years, female, white, stage:Stage IIIA, alive, 739 days
233.7
TCGA-MY-A913-01A
0 years, female, black or african american, stage:Stage IIA, alive, 524 days
227.0
TCGA-BI-A0VS-01A
0 years, female, white, stage:Stage IB, alive, 1735 days
223.2
TCGA-C5-A1MF-01A
0 years, female, white, stage:Stage IB, alive, 1617 days
218.8
TCGA-HM-A3JJ-01A
0 years, female, black or african american, stage:Stage IB, dead, 659 days
214.0
TCGA-DS-A1OD-01A
0 years, female, white, stage:Stage IB, alive, 3874 days
213.1
TCGA-EA-A5ZE-01A
0 years, female, asian, stage:Stage IB, alive, 829 days
190.3
TCGA-EX-A3L1-01A
0 years, female, white, stage:Stage IIA, alive, 463 days
184.8
TCGA-DS-A0VM-01A
0 years, female, white, stage:Stage IB, alive, 3589 days
183.7
TCGA-Q1-A73S-01A
0 years, female, white, stage:Stage IB, alive, 688 days
182.0
TCGA-C5-A8XH-01A
0 years, female, white, stage:Stage IB, dead, 1394 days
164.6
TCGA-IR-A3LH-01A
0 years, female, black or african american, stage:Stage IIA, alive, 2394 days
161.7
TCGA-C5-A0TN-01A
0 years, female, black or african american, stage:Stage IB, dead, 348 days
160.0
TCGA-EK-A3GN-01A
0 years, female, white, stage:Stage IIIB, alive, 27 days
158.0
TCGA-C5-A8XJ-01A
0 years, female, white, stage:Stage IB, alive, 4467 days
157.8
TCGA-EA-A3QD-01A
0 years, female, white, stage:Stage IIIB, alive, 397 days
136.6
TCGA-DS-A1OB-01A
0 years, female, white, stage:Stage IB, dead, 861 days
136.0
TCGA-EK-A2RK-01A
0 years, female, white, stage:Stage IA, alive, 13 days
135.8
TCGA-EA-A1QS-01A
0 years, female, white, stage:Stage IB, alive, 1203 days
131.7
TCGA-MY-A5BE-01A
0 years, female, black or african american, stage:Stage IB, alive, 1066 days
127.0
TCGA-C5-A7UC-01A
0 years, female, white, stage:Stage IB, dead, 523 days
126.5
TCGA-Q1-A6DT-01A
0 years, female, white, stage:Stage I, dead, 275 days
120.6
TCGA-C5-A2LV-01A
0 years, female, black or african american, stage:Stage IB, alive, 2234 days
111.6
TCGA-EK-A2H1-01A
0 years, female, white, stage:Stage IB, alive, 799 days
109.6
TCGA-EA-A43B-01A
0 years, female, white, stage:Stage IB, alive, 791 days
104.5
TCGA-MA-AA3W-01A
0 years, female, white, stage:Stage IB, alive, 685 days
103.7
TCGA-C5-A902-01A
0 years, female, black or african american, stage:Stage IB, alive, 149 days
103.5
TCGA-EK-A2RA-01A
0 years, female, stage:Stage IIA, alive, 1246 days
87.2
TCGA-VS-A959-01A
0 years, female, stage:Stage IIB, alive, 1561 days
85.7
TCGA-DG-A2KK-01A
0 years, female, stage:Stage IIIB, alive, 2496 days
84.4
TCGA-EA-A3Y4-01A
0 years, female, white, stage:Stage IB, alive, 1122 days
83.7
TCGA-GH-A9DA-01A
0 years, female, white, stage:Stage IB, alive, 540 days
76.9
TCGA-VS-A9UB-01A
0 years, female, stage:Stage IIB, alive, 911 days
67.2
TCGA-C5-A2LS-01A
0 years, female, white, stage:Stage IB, alive, 1345 days
56.3
TCGA-C5-A2LT-01A
0 years, female, white, stage:Stage IB, alive, 2226 days
55.7
TCGA-MY-A5BD-01A
0 years, female, white, stage:Stage IIB, alive, 1667 days
53.8
TCGA-VS-A958-01A
0 years, female, white, stage:Stage IIB, alive, 1525 days
50.4
TCGA-EK-A2RM-01A
0 years, female, white, stage:Stage IB, alive, 50 days
47.4
TCGA-EK-A2RJ-01A
0 years, female, white, stage:Stage IB, alive, 53 days
46.9
TCGA-LP-A5U2-01A
0 years, female, asian, stage:Stage IIIB, alive, 9 days
46.0
TCGA-C5-A7X3-01A
0 years, female, white, stage:Stage IIIB, dead, 284 days
39.1
TCGA-C5-A7UI-01A
0 years, female, black or african american, stage:Stage IB, dead, 2888 days
38.3
TCGA-C5-A1M6-01A
0 years, female, white, stage:Stage IIB, dead, 955 days
37.0
TCGA-VS-A9V1-01A
0 years, female, white, stage:Stage IVB, dead, 157 days
35.6
TCGA-IR-A3LK-01A
0 years, female, white, stage:Stage IB, dead, 908 days
35.5
TCGA-EK-A2R7-01A
0 years, female, white, stage:Stage IB, alive, 27 days
34.9
TCGA-C5-A2M1-01A
0 years, female, white, stage:Stage IB, alive, 1169 days
31.1
TCGA-C5-A8YR-01A
0 years, female, white, stage:Stage IB, dead, 837 days
26.4
TCGA-JW-A69B-01A
0 years, female, white, stage:Stage IB, alive, 863 days
24.3
TCGA-EK-A2R9-01A
0 years, female, white, stage:Stage IB, alive, 4 days
21.8
TCGA-IR-A3LI-01A
0 years, female, white, stage:Stage IVB, alive, 2493 days
21.8
TCGA-JW-A5VG-01A
0 years, female, american indian or alaska native, stage:Stage IIA, alive, 834 days
19.9
TCGA-IR-A3LF-01A
0 years, female, white, stage:Stage IB, alive, 2949 days
18.6
TCGA-EK-A2R8-01A
0 years, female, white, stage:Stage IB, alive, 44 days
17.6
TCGA-VS-A94Z-01A
0 years, female, white, stage:Stage IIB, alive, 1015 days
15.2
TCGA-EK-A2RL-01A
0 years, female, black or african american, stage:Stage IB, dead, 1453 days
14.7
TCGA-EK-A3GK-01A
0 years, female, white, stage:Stage IB, alive, 15 days
13.2
TCGA-Q1-A5R1-01A
0 years, female, white, stage:Stage IB, alive, 474 days
11.9
TCGA-Q1-A73P-01A
0 years, female, white, stage:Stage IB, alive, 483 days
11.4
TCGA-C5-A3HE-01A
0 years, female, white, stage:Stage IB, alive, 548 days
11.4
TCGA-EA-A5ZF-01A
0 years, female, asian, stage:Stage IB, alive, 828 days
11.3
TCGA-C5-A7X8-01A
0 years, female, white, stage:Stage IB, alive, 83 days
10.8
TCGA-FU-A3EO-01A
0 years, female, white, stage:Stage IIB, alive, 490 days
10.1
TCGA-VS-A9UT-01A
0 years, female, asian, stage:Stage IB, alive, 482 days
9.7
TCGA-IR-A3LA-01A
0 years, female, white, stage:Stage IB, alive, 4172 days
9.2
TCGA-VS-A9V5-01A
0 years, female, white, stage:Stage IIB, dead, 494 days
8.6
TCGA-VS-A9UR-01A
0 years, female, white, stage:Stage IIA, alive, 793 days
7.6
TCGA-DS-A7WH-01A
0 years, female, white, stage:Stage IB, alive, 533 days
7.0
TCGA-EA-A439-01A
0 years, female, asian, stage:Stage IIA, alive, 965 days
6.8
TCGA-C5-A2M2-01A
0 years, female, white, stage:Stage IB, dead, 1011 days
6.7
TCGA-C5-A1MI-01A
0 years, female, white, stage:Stage IB, dead, 1083 days
6.5
TCGA-VS-A952-01A
0 years, female, white, stage:Stage IB, alive, 1778 days
6.4
TCGA-VS-A8EJ-01A
0 years, female, white, stage:Stage IIB, dead, 607 days
6.4
TCGA-LP-A7HU-01A
0 years, female, asian, stage:Stage II, alive, 406 days
6.1
TCGA-C5-A907-01A
0 years, female, white, stage:Stage IB, alive, 448 days
5.6
TCGA-JW-A5VH-01A
0 years, female, american indian or alaska native, stage:Stage IVB, dead, 100 days
5.3
TCGA-FU-A770-01A
0 years, female, white, stage:Stage IIIB, alive, 34 days
4.1
TCGA-C5-A1MQ-01A
0 years, female, white, stage:Stage IIA, alive, 1031 days
4.0
TCGA-VS-A9UQ-01A
0 years, female, stage:Stage IB, alive, 1263 days
3.6
TCGA-C5-A1MJ-01A
0 years, female, white, stage:Stage IB, dead, 14 days
3.2
TCGA-EX-A8YF-01A
0 years, female, white, stage:Stage IB, alive, 473 days
3.2
TCGA-EA-A410-01A
0 years, female, white, stage:Stage IIA, alive, 803 days
3.1
TCGA-C5-A1M9-01A
0 years, female, white, stage:Stage IB, dead, 1065 days
3.1
TCGA-VS-A8QH-01A
0 years, female, white, stage:Stage IB, dead, 1210 days
3.0
TCGA-JX-A3Q8-01A
0 years, female, asian, stage:Stage IB, alive, 1357 days
2.9
TCGA-2W-A8YY-01A
0 years, female, white, stage:Stage IB, alive, 533 days
2.9
TCGA-EK-A2PK-01A
0 years, female, white, stage:Stage IB, alive, 12 days
2.8
TCGA-VS-A9V4-01A
0 years, female, white, stage:Stage IVA, dead, 132 days
2.8
TCGA-EA-A4BA-01A
0 years, female, white, stage:Stage IB, alive, 755 days
2.7
TCGA-C5-A8YT-01A
0 years, female, white, stage:Stage IB, dead, 633 days
2.5
TCGA-VS-A9UZ-01A
0 years, female, white, stage:Stage IB, alive, 2044 days
2.3
TCGA-HM-A6W2-01A
0 years, female, black or african american, stage:Stage IVB, alive, 287 days
2.3
TCGA-DS-A7WF-01A
0 years, female, stage:Stage IB, dead, 492 days
1.9
TCGA-FU-A57G-01A
0 years, female, white, stage:Stage IB, alive, 1078 days
1.9
TCGA-Q1-A6DV-01A
0 years, female, asian, stage:Stage IB, alive, 491 days
1.8
TCGA-IR-A3LB-01A
0 years, female, white, stage:Stage IB, dead, 2032 days
1.5
TCGA-VS-A9UO-01A
0 years, female, white, stage:Stage IIB, alive, 1456 days
1.3
TCGA-FU-A40J-01A
0 years, female, white, stage:Stage IIIB, alive, 426 days
1.0
TCGA-EX-A449-01A
0 years, female, white, stage:Stage IVB, alive, 447 days
0.8
TCGA-VS-A9UJ-01A
0 years, female, stage:Stage IIB, dead, 52 days
0.8
TCGA-Q1-A73R-01A
0 years, female, white, stage:Stage I, alive, 567 days
0.7
TCGA-DG-A2KH-01A
0 years, female, stage:Stage IB, alive, 34 days
0.6
TCGA-FU-A3HZ-01A
0 years, female, white, stage:Stage IIA, alive, 1103 days
0.0
TCGA-C5-A1ME-01A
0 years, female, white, stage:Stage IB, alive, 1756 days
0.0
TCGA-EA-A556-01A
0 years, female, white, stage:Stage IB, alive, 453 days
0.0
TCGA-UC-A7PI-01A
0 years, female, white, stage:Stage IB, alive, 2114 days
0.0
TCGA-DG-A2KJ-01A
0 years, female, stage:Stage IIIB, alive, 2893 days
0.0
TCGA-FU-A23K-01A
0 years, female, white, stage:Stage IIIB, alive, 372 days
0.0
TCGA-PN-A8MA-01A
0 years, female, black or african american, stage:Stage IIB, alive, 90 days
0.0
TCGA-VS-A9UL-01A
0 years, female, white, stage:Stage IIIB, dead, 442 days
0.0
TCGA-C5-A7CM-01A
0 years, female, white, stage:Stage IB, alive, 619 days
0.0
TCGA-VS-A9UP-01A
0 years, female, stage:Stage IIA, alive, 1444 days
0.0
TCGA-VS-A9V0-01A
0 years, female, stage:Stage IB, alive, 573 days
0.0
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CERVICAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.