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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LYPLA1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
36.8
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
119.0
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
90.3
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
81.0
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
71.7
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
67.0
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
64.6
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
64.0
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
63.0
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
59.0
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
58.3
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
54.8
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
54.2
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
53.5
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
52.3
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
46.5
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
46.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
45.9
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
42.9
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
42.6
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
42.6
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
41.4
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
41.3
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
40.5
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
39.0
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
38.5
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
36.8
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
36.7
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
36.7
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
36.4
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
35.9
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
35.3
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
34.5
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
34.2
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
33.0
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
30.5
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
29.7
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
29.2
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
28.9
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
28.3
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
28.1
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
26.1
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
25.9
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
25.5
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
25.2
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
25.0
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
24.8
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
24.7
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
24.6
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
22.5
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
22.4
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
20.4
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
19.6
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
19.2
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
17.6
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
17.5
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
17.3
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
16.4
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
15.4
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
13.5
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
10.6
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
8.7
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
8.2
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
6.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LYPLA1 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
31.9
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
328.0
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
194.6
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
144.8
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
133.3
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
99.9
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
85.2
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
80.0
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
77.3
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
76.6
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
76.3
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
76.0
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
74.8
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
73.4
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
70.2
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
69.0
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
69.0
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
66.9
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
65.8
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
65.2
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
62.9
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
62.4
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
62.1
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
60.4
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
60.1
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
59.6
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
59.2
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
59.1
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
57.6
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
56.1
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
54.5
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
53.7
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
53.4
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
53.4
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
52.7
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
52.7
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
52.5
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
52.4
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
51.6
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
51.5
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
51.4
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
51.2
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
51.1
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
50.3
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
50.2
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
49.8
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
49.8
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
49.7
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
49.3
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
49.2
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
49.0
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
48.9
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
48.8
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
48.7
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
48.2
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
48.1
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
47.8
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
47.8
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
47.6
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
47.5
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
47.4
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
47.0
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
47.0
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
47.0
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
46.8
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
46.8
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
46.5
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
46.3
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
46.3
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
46.1
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
46.1
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
46.0
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
45.7
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
45.7
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
45.6
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
45.3
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
45.2
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
45.2
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
45.2
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
45.0
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
44.7
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
44.7
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
44.6
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
44.5
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
44.4
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
44.2
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
44.1
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
44.0
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
43.9
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
43.8
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
43.5
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
43.4
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
43.3
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
43.0
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
42.9
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
42.8
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
42.8
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
42.8
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
42.5
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
42.4
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
42.4
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
42.2
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
42.1
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
42.1
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
42.0
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
41.8
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
41.6
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
41.6
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
41.4
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
40.7
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
40.7
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
40.5
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
40.5
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
40.4
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
40.3
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
40.1
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
40.0
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
39.9
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
39.8
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
39.6
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
39.4
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
39.4
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
39.3
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
39.2
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
39.1
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
39.1
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
39.0
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
38.9
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
38.9
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
38.7
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
38.3
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
38.1
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
38.1
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
38.0
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
37.9
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
37.9
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
37.9
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
37.8
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
37.4
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
37.3
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
37.2
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
37.2
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
37.2
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
37.1
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
36.8
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
36.8
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
36.8
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
36.8
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
36.8
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
36.6
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
36.6
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
36.5
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
36.4
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
36.4
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
36.3
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
36.3
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
36.3
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
35.9
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
35.8
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
35.8
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
35.6
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
35.6
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
35.6
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
35.5
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
35.5
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
35.3
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
35.3
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
35.2
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
35.1
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
35.1
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
35.1
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
35.1
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
35.0
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
34.8
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
34.7
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
34.6
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
34.5
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
34.5
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
34.5
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
34.4
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
34.3
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
34.3
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
34.3
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
34.1
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
34.1
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
34.1
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
33.9
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
33.9
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
33.8
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
33.8
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
33.6
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
33.6
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
33.6
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
33.5
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
33.5
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
33.3
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
33.2
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
33.1
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
32.9
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
32.8
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
32.7
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
32.4
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
32.3
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
32.3
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
32.3
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
32.2
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
32.1
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
32.1
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
32.0
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
32.0
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
32.0
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
31.7
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
31.7
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
31.7
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
31.7
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
31.6
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
31.6
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
31.6
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
31.5
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
31.5
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
31.4
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
31.3
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
31.3
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
31.2
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
31.2
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
31.2
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
31.1
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
31.1
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
31.1
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
31.0
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
30.9
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
30.9
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
30.9
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
30.8
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
30.8
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
30.7
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
30.7
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
30.5
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
30.5
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
30.4
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
30.4
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
30.4
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
30.3
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
30.3
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
30.3
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
30.3
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
30.1
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
30.1
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
30.0
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
30.0
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
30.0
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
29.9
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
29.9
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
29.8
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
29.8
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
29.6
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
29.6
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
29.5
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
29.2
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
29.2
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
29.1
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
29.1
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
29.1
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
28.9
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
28.9
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
28.8
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
28.7
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
28.7
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
28.7
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
28.7
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
28.6
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
28.5
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
28.4
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
28.3
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
28.3
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
28.3
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
28.3
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
28.3
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
28.3
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
28.2
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
28.2
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
28.2
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
28.2
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
28.2
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
28.1
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
28.1
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
28.0
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
28.0
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
28.0
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
28.0
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
27.8
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
27.8
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
27.4
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
27.4
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
27.4
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
27.3
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
27.3
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
27.3
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
27.2
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
27.1
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
27.1
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
26.9
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
26.9
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
26.8
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
26.8
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
26.7
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
26.5
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
26.5
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
26.4
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
26.4
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
26.3
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
26.3
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
26.3
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
26.3
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
26.3
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
26.3
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
26.0
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
26.0
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
25.9
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
25.8
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
25.8
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
25.7
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
25.7
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
25.6
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
25.4
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
25.3
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
25.3
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
25.2
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
25.2
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
25.1
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
25.1
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
25.0
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
25.0
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
25.0
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
24.9
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
24.9
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
24.7
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
24.7
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
24.7
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
24.6
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
24.6
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
24.6
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
24.5
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
24.5
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
24.4
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
24.3
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
24.2
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
24.2
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
24.2
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
24.2
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
24.0
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
23.8
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
23.8
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
23.8
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
23.7
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
23.7
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
23.7
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
23.4
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
23.3
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
23.3
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
23.0
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
23.0
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
22.7
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
22.7
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
22.7
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
22.6
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
22.6
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
22.6
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
22.5
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
22.4
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
22.3
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
22.3
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
22.3
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
22.2
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
22.2
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
22.1
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
22.1
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
22.0
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
21.9
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
21.9
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
21.9
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
21.8
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
21.8
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
21.7
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
21.7
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
21.6
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
21.5
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
21.5
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
21.3
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
21.3
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
21.0
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
20.9
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
20.8
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
20.6
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
20.6
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
20.6
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
20.6
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
20.6
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
20.5
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
20.5
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
20.2
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
20.2
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
20.1
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
20.0
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
20.0
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
20.0
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
20.0
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
20.0
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
19.9
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
19.8
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
19.7
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
19.7
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
19.7
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
19.6
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
19.5
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
19.3
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
19.1
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
19.1
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
19.0
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
18.9
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
18.8
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
18.8
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
18.8
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
18.7
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
18.6
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
18.3
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
18.2
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
18.2
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
18.2
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
18.1
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
18.0
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
17.8
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
17.8
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
17.7
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
17.7
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
17.6
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
17.6
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
17.6
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
17.6
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
17.4
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
17.2
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
17.1
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
17.1
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
17.0
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
17.0
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
16.9
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
16.8
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
16.6
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
16.4
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
16.2
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
16.2
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
16.1
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
16.1
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
16.0
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
15.9
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
15.7
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
15.7
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
15.5
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
15.5
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
15.4
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
15.3
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
15.2
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
15.1
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
14.6
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
14.5
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
14.3
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
14.2
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
14.1
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
13.6
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
13.5
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
13.4
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
13.3
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
13.3
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
13.2
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
13.1
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
12.9
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
12.9
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
12.7
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
12.7
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
12.4
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
12.4
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
12.4
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
12.2
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
12.0
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
12.0
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
12.0
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
12.0
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
11.8
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
11.7
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
11.6
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
11.6
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
11.6
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
11.4
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
11.4
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
11.3
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
11.1
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
11.0
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
10.9
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
10.8
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
10.8
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
10.6
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
10.1
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
9.9
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
9.6
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
9.5
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
9.3
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
9.1
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
8.8
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
8.7
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
8.6
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
8.6
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
7.9
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
7.8
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
7.5
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
7.4
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
6.7
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
6.5
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
6.5
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
5.2
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
3.7
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
3.2
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LYPLA1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
38.9
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
90.3
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
71.7
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
65.6
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
63.3
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
62.6
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
55.1
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
53.8
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
53.5
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
53.5
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
52.5
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
52.5
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
51.8
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
51.2
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
50.7
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
50.7
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
50.1
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
49.7
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
49.4
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
48.9
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
48.9
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
48.3
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
47.9
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
47.7
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
46.7
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
46.7
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
46.6
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
46.5
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
46.3
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
46.1
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
45.4
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
45.2
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
44.7
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
44.7
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
44.6
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
44.4
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
44.2
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
43.3
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
42.9
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
42.8
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
42.2
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
42.0
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
40.7
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
40.7
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
39.6
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
39.3
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
39.3
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
39.3
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
38.4
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
38.3
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
38.1
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
37.2
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
36.5
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
36.2
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
36.1
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
36.1
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
35.8
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
35.8
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
35.7
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
35.3
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
35.2
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
34.7
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
34.4
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
34.2
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
34.1
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
33.9
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
33.2
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
32.6
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
32.4
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
31.8
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
31.7
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
31.4
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
31.2
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
31.0
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
30.9
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
30.1
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
29.5
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
29.5
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
29.1
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
29.1
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
28.9
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
28.6
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
27.5
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
27.2
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
27.1
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
26.7
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
26.7
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
26.4
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
26.1
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
26.0
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
26.0
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
25.6
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
24.8
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
23.8
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
23.5
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
23.3
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
21.4
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
19.6
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
19.1
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
17.5
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LYPLA1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
28.1
Number of samples
282
Samples
Sample
Description
TPM
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
165.3
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
136.9
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
77.8
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
75.3
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
72.6
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
67.8
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
64.5
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
64.4
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
61.9
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
59.8
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
59.0
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
58.9
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
56.8
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
56.2
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
55.6
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
55.4
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
54.6
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
54.2
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
53.2
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
52.6
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
51.7
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
51.6
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
50.0
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
48.4
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
48.2
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
48.1
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
47.9
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
47.9
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
46.7
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
46.7
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
46.5
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
46.0
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
45.9
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
45.3
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
45.1
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
44.7
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
44.6
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
44.4
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
44.3
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
44.3
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
43.5
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
43.3
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
42.7
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
42.7
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
42.4
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
42.2
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
41.3
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
41.3
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
40.8
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
40.7
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
40.5
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
40.4
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
39.8
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
39.3
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
39.3
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
39.2
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
39.2
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
39.1
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
39.1
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
39.0
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
38.8
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
38.7
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
38.3
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
38.3
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
38.2
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
37.6
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
36.8
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
36.7
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
36.5
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
36.4
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
36.2
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
36.0
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
36.0
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
35.9
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
35.8
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
35.8
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
35.7
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
35.5
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
35.2
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
34.7
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
34.6
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
34.4
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
34.3
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
34.2
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
34.1
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
33.8
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
33.7
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
33.7
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
33.7
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
33.5
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
33.1
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
32.9
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
32.9
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
32.5
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
32.5
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
32.3
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
32.0
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
31.4
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
31.1
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
31.0
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
31.0
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
30.8
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
30.8
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
30.8
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
30.6
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
30.5
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
30.5
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
30.3
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
30.2
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
29.9
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
29.8
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
29.8
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
29.7
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
29.5
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
29.2
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
29.0
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
29.0
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
28.8
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
28.5
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
28.5
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
28.2
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
28.1
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
27.5
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
27.4
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
27.2
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
27.2
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
27.0
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
27.0
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
26.5
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
26.4
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
26.2
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
26.1
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
26.0
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
26.0
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
25.6
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
25.4
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
25.2
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
25.0
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
25.0
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
24.8
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
24.7
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
24.5
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
24.3
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
24.3
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
24.2
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
24.0
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
23.8
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
23.6
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
23.6
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
23.4
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
23.4
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
23.2
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
23.0
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
23.0
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
22.9
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
22.8
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
22.8
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
22.7
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
22.3
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
22.1
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
22.0
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
21.9
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
21.9
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
21.9
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
21.8
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
21.7
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
21.6
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
21.5
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
21.4
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
21.3
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
21.2
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
21.1
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
20.9
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
20.9
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
20.6
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
20.6
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
20.6
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
20.6
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
20.5
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
20.4
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
20.2
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
20.1
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
20.1
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
20.1
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
20.0
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
20.0
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
20.0
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
19.9
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
19.9
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
19.7
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
19.6
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
19.6
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
19.5
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
19.2
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
19.1
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
19.1
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
18.8
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
18.2
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
18.0
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
18.0
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
18.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
17.9
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
17.7
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
17.6
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
17.3
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
17.3
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
17.3
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
17.2
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
16.8
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
16.8
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
16.2
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
16.1
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
15.9
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
15.8
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
15.6
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
15.6
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
15.4
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
15.4
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
15.4
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
15.1
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
14.9
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
14.6
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
14.3
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
14.2
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
14.2
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
14.2
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
14.2
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
13.8
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
13.8
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
13.5
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
13.5
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
13.4
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
13.3
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
13.2
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
13.1
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
13.0
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
12.8
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
12.8
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
12.5
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
12.5
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
12.4
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
12.3
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
12.1
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
12.0
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
11.8
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
11.8
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
11.7
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
11.7
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
11.6
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
11.5
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
11.4
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
11.4
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
11.2
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
11.1
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
11.1
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
11.0
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
10.9
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
10.7
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
10.7
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
10.6
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
10.2
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
9.9
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
9.5
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
9.0
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
8.2
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
7.7
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
7.7
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
7.3
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
7.2
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
7.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
6.4
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
5.6
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
5.4
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
5.3
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
5.1
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
4.8
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
4.4
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
4.0
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
4.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
3.2
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
2.9
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
2.8
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0001180009
Tumor
1.1
CPT0002270011
Tumor
0.9
CPT0079180003
Tumor
0.7
CPT0012550003
Tumor
0.7
CPT0023350003
Tumor
0.6
CPT0012770003
Normal
0.5
CPT0015730003
Tumor
0.5
CPT0009080003
Normal
0.5
CPT0025610001
Normal
0.5
CPT0077500001
Normal
0.4
CPT0076350001
Normal
0.4
CPT0023710001
Normal
0.4
CPT0001500009
Tumor
0.4
CPT0066430001
Normal
0.4
CPT0077140001
Normal
0.4
CPT0012090003
Normal
0.4
CPT0079430001
Normal
0.3
CPT0082010001
Normal
0.3
CPT0065450001
Normal
0.3
CPT0012570003
Normal
0.3
CPT0086890003
Normal
0.3
CPT0001190001
Normal
0.3
CPT0078840001
Normal
0.3
CPT0006950001
Normal
0.3
CPT0079000001
Normal
0.3
CPT0014350001
Normal
0.3
CPT0092310003
Normal
0.3
CPT0088920001
Normal
0.3
CPT0010170001
Normal
0.3
CPT0063330001
Normal
0.3
CPT0026420001
Normal
0.3
CPT0078670001
Normal
0.3
CPT0081620001
Normal
0.3
CPT0001350001
Normal
0.3
CPT0089480003
Normal
0.3
CPT0078830003
Tumor
0.2
CPT0089040001
Normal
0.2
CPT0018250001
Normal
0.2
CPT0014450004
Tumor
0.2
CPT0092740003
Normal
0.2
CPT0078940001
Normal
0.2
CPT0092800003
Normal
0.2
CPT0023360001
Normal
0.2
CPT0001230001
Normal
0.2
CPT0069010001
Normal
0.2
CPT0064400001
Normal
0.2
CPT0013790003
Normal
0.2
CPT0006730001
Normal
0.2
CPT0006530001
Normal
0.2
CPT0007470001
Normal
0.2
CPT0012370003
Tumor
0.2
CPT0065750003
Tumor
0.2
CPT0017450001
Normal
0.2
CPT0024680001
Normal
0.2
CPT0020020001
Normal
0.2
CPT0075570001
Normal
0.2
CPT0000790001
Normal
0.2
CPT0086030003
Tumor
0.2
CPT0087050003
Normal
0.2
CPT0012180003
Tumor
0.2
CPT0024670003
Tumor
0.2
CPT0088570001
Normal
0.2
CPT0088780001
Normal
0.2
CPT0020130001
Normal
0.2
CPT0025060001
Normal
0.1
CPT0078530001
Normal
0.1
CPT0000890001
Normal
0.1
CPT0012900004
Tumor
0.1
CPT0009020003
Normal
0.1
CPT0012640003
Normal
0.1
CPT0019160001
Normal
0.1
CPT0086370003
Normal
0.1
CPT0014130001
Normal
0.1
CPT0002370001
Normal
0.1
CPT0025920001
Normal
0.1
CPT0088640003
Normal
0.1
CPT0079410003
Tumor
0.1
CPT0088500001
Normal
0.1
CPT0012920003
Normal
0.1
CPT0078660003
Tumor
0.1
CPT0088550004
Tumor
0.1
CPT0078800003
Tumor
0.1
CPT0007320003
Tumor
0.1
CPT0077110003
Tumor
0.1
CPT0066520001
Normal
0.1
CPT0002350011
Tumor
0.1
CPT0007870001
Normal
0.1
CPT0021240003
Tumor
0.1
CPT0063640001
Normal
0.1
CPT0014470001
Normal
0.1
CPT0079300001
Normal
0.1
CPT0001550001
Normal
0.0
CPT0012670003
Tumor
0.0
CPT0089460004
Tumor
0.0
CPT0066470004
Tumor
0.0
CPT0019130003
Tumor
0.0
CPT0001510001
Normal
0.0
CPT0086830003
Normal
0.0
CPT0088710001
Normal
0.0
CPT0012290003
Normal
0.0
CPT0086970003
Normal
0.0
CPT0012280003
Tumor
0.0
CPT0000660001
Normal
0.0
CPT0078930003
Tumor
0.0
CPT0065820001
Normal
0.0
CPT0069190001
Normal
0.0
CPT0012080003
Tumor
0.0
CPT0064370003
Tumor
0.0
CPT0069000003
Tumor
0.0
CPT0088970003
Tumor
0.0
CPT0092790003
Tumor
0.0
CPT0065430003
Tumor
-0.1
CPT0092160003
Tumor
-0.1
CPT0063630003
Tumor
-0.1
CPT0086820003
Tumor
-0.1
CPT0017410003
Tumor
-0.1
CPT0088480003
Tumor
-0.1
CPT0076330003
Tumor
-0.1
CPT0086870003
Tumor
-0.1
CPT0007860003
Tumor
-0.1
CPT0001220008
Tumor
-0.1
CPT0015810003
Tumor
-0.1
CPT0065810003
Tumor
-0.1
CPT0026410003
Tumor
-0.1
CPT0025230003
Tumor
-0.1
CPT0025050003
Tumor
-0.1
CPT0086950003
Tumor
-0.1
CPT0011240003
Tumor
-0.1
CPT0010120001
Normal
-0.1
CPT0079510001
Normal
-0.1
CPT0092190003
Normal
-0.1
CPT0009060003
Tumor
-0.1
CPT0071150004
Tumor
-0.2
CPT0001540009
Tumor
-0.2
CPT0065870003
Tumor
-0.2
CPT0000870016
Tumor
-0.2
CPT0084590001
Normal
-0.2
CPT0025350003
Tumor
-0.2
CPT0019990003
Tumor
-0.2
CPT0020120003
Tumor
-0.2
CPT0079270003
Tumor
-0.2
CPT0001260009
Tumor
-0.2
CPT0023690003
Tumor
-0.2
CPT0025880003
Tumor
-0.2
CPT0006900003
Tumor
-0.2
CPT0075170001
Normal
-0.2
CPT0077310003
Tumor
-0.2
CPT0009000003
Tumor
-0.2
CPT0077490003
Tumor
-0.2
CPT0079380003
Tumor
-0.2
CPT0075560003
Tumor
-0.2
CPT0006630003
Tumor
-0.2
CPT0010110003
Tumor
-0.2
CPT0001270001
Normal
-0.2
CPT0084560003
Tumor
-0.2
CPT0088900003
Tumor
-0.3
CPT0000780007
Tumor
-0.3
CPT0010160003
Tumor
-0.3
CPT0077320001
Normal
-0.3
CPT0011410003
Tumor
-0.3
CPT0014160003
Tumor
-0.3
CPT0025580004
Tumor
-0.3
CPT0017850003
Tumor
-0.3
CPT0078990003
Tumor
-0.3
CPT0001340003
Tumor
-0.3
CPT0088760003
Tumor
-0.3
CPT0092730003
Tumor
-0.3
CPT0089020003
Tumor
-0.3
CPT0000640003
Tumor
-0.3
CPT0088690003
Tumor
-0.3
CPT0075130003
Tumor
-0.4
CPT0066480003
Tumor
-0.4
CPT0086360003
Tumor
-0.4
CPT0092290003
Tumor
-0.4
CPT0063320003
Tumor
-0.4
CPT0078510003
Tumor
-0.4
CPT0075720003
Tumor
-0.4
CPT0081990003
Tumor
-0.4
CPT0079230003
Tumor
-0.4
CPT0087040003
Tumor
-0.4
CPT0069160003
Tumor
-0.4
CPT0079480003
Tumor
-0.5
CPT0015910003
Tumor
-0.5
CPT0014370004
Tumor
-0.6
CPT0006440003
Tumor
-0.6
CPT0081600003
Tumor
-0.6
CPT0025170003
Tumor
-0.6
CPT0065690003
Tumor
-0.6
CPT0088630003
Tumor
-0.7
CPT0065930003
Tumor
-0.7
CPT0081880003
Tumor
-0.7
CPT0025290003
Tumor
-0.7
CPT0085670003
Tumor
-0.8
CPT0025110003
Tumor
-0.8
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.