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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TGFBI is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
51.1
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
1522.4
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
495.3
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
153.5
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
73.8
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
59.8
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
53.5
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
50.8
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
46.8
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
44.3
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
39.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
38.4
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
34.6
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
33.6
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
32.7
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
30.9
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
27.7
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
26.4
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
25.7
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
24.0
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
23.9
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
23.0
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
20.5
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
18.6
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
18.5
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
17.3
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
16.8
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
16.7
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
16.5
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
15.4
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
14.9
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
14.7
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
14.2
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
13.2
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
13.2
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
12.6
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
12.5
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
12.4
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
12.0
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
12.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
11.4
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
10.1
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
9.7
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
9.4
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
9.3
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
8.8
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
8.6
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
8.3
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
8.3
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
7.3
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
6.9
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
6.4
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
6.1
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
5.6
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
4.7
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
4.5
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
3.6
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
3.1
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
3.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
1.7
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
1.2
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
0.7
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
0.7
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
0.2
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TGFBI is potential prognostic, high expression is unfavorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
993.9
Number of samples
521
Samples
Sample
Description
TPM
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
14231.3
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
13014.3
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
12436.4
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
11237.3
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
10882.7
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
9740.2
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
9434.9
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
8848.2
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
8740.6
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
8579.3
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
8541.1
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
7597.4
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
7376.9
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
7231.8
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
6034.4
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
5844.0
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
5839.3
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
5832.4
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
5353.7
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
5188.1
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
5142.0
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
5126.4
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
4935.5
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
4791.9
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
4791.3
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
4709.7
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
4518.7
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
4443.6
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
4326.2
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
4164.6
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
4125.8
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
4110.1
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
4067.1
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
4066.6
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
4053.5
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
3916.0
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
3902.1
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
3736.6
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
3670.8
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
3555.3
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
3239.3
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
3134.9
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
3030.6
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
3029.9
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
2997.4
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
2997.3
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
2949.7
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
2910.8
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
2873.7
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
2795.8
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
2779.5
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
2774.9
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
2706.9
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
2647.4
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
2636.8
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
2625.4
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
2566.6
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
2345.2
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
2332.7
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
2318.5
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
2216.6
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
2209.4
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
2206.6
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
2177.4
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
2175.3
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
2082.5
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
2074.6
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
2055.1
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
2031.9
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
2023.5
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
1987.1
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
1984.3
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
1970.9
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
1946.8
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
1911.3
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
1849.4
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
1817.8
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
1810.3
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
1807.7
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
1786.3
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
1759.3
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
1750.1
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
1748.3
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
1742.5
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
1727.7
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
1688.7
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
1687.4
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
1651.2
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
1629.7
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
1616.8
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
1600.4
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
1588.0
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
1572.8
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
1512.4
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
1477.1
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
1475.0
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
1472.6
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
1454.9
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
1452.6
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
1447.2
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
1439.1
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
1432.1
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
1421.1
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
1413.7
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
1407.0
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
1406.5
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
1392.0
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
1386.1
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
1374.5
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
1338.6
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
1336.1
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
1324.9
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
1265.2
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
1193.1
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
1191.1
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
1186.4
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
1183.5
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
1180.7
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
1171.8
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
1162.7
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
1156.0
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
1123.9
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
1108.5
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
1094.6
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
1084.2
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
1078.9
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
1078.9
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
1064.2
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
1053.4
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
1033.7
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
1015.5
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
1014.3
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
1007.0
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
987.5
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
973.9
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
968.3
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
949.5
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
931.5
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
904.7
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
888.0
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
887.8
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
868.5
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
848.5
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
838.0
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
819.6
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
816.0
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
809.9
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
798.8
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
793.9
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
789.4
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
780.8
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
772.2
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
765.5
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
765.5
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
761.9
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
740.7
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
737.5
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
729.0
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
728.4
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
724.4
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
713.7
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
711.1
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
697.4
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
684.8
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
667.6
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
650.3
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
646.1
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
617.8
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
614.5
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
611.9
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
606.2
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
601.7
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
594.5
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
589.2
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
575.6
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
574.0
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
571.3
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
565.6
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
554.4
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
549.1
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
543.7
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
517.0
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
508.2
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
502.4
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
500.4
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
500.2
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
494.9
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
484.4
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
470.3
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
467.6
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
466.7
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
459.3
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
458.1
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
454.0
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
450.5
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
445.4
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
441.7
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
435.9
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
429.3
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
427.9
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
422.4
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
413.2
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
412.1
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
406.9
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
405.9
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
403.8
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
403.6
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
398.2
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
395.8
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
395.2
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
395.0
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
389.8
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
384.8
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
383.1
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
380.6
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
378.7
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
377.3
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
376.7
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
371.7
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
369.0
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
363.2
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
354.8
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
349.2
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
344.8
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
336.8
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
327.5
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
325.7
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
325.3
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
317.6
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
317.1
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
311.5
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
311.4
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
310.6
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
308.6
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
301.9
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
300.7
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
298.9
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
293.4
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
292.2
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
291.7
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
290.8
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
281.0
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
279.9
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
279.2
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
278.7
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
270.8
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
270.8
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
269.8
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
269.7
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
269.4
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
269.0
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
268.9
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
266.8
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
266.2
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
264.1
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
258.0
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
255.4
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
254.5
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
254.0
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
253.7
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
253.6
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
251.0
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
249.9
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
247.3
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
244.4
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
240.1
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
238.6
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
235.6
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
230.0
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
227.5
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
226.9
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
222.0
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
218.3
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
215.3
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
214.8
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
214.5
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
214.1
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
210.9
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
208.7
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
208.7
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
207.6
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
206.2
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
204.1
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
202.2
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
201.3
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
198.8
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
198.7
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
196.8
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
195.7
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
194.3
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
194.0
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
189.5
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
189.1
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
186.1
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
185.8
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
185.4
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
185.4
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
185.1
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
184.1
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
183.4
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
182.9
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
182.2
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
180.2
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
176.4
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
175.6
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
175.1
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
175.0
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
173.8
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
173.3
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
172.2
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
172.2
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
171.6
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
168.8
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
167.8
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
167.1
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
166.8
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
166.7
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
165.7
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
164.2
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
160.4
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
159.1
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
159.0
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
157.6
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
157.5
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
155.3
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
154.9
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
154.5
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
153.3
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
153.1
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
152.7
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
152.3
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
152.0
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
151.9
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
150.2
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
150.1
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
149.1
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
144.0
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
142.2
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
141.7
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
139.8
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
138.8
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
138.2
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
137.1
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
136.5
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
136.4
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
135.6
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
133.4
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
132.6
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
131.8
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
131.2
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
131.1
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
130.7
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
130.2
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
130.0
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
124.7
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
124.5
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
123.2
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
121.9
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
119.2
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
119.2
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
119.0
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
118.8
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
118.1
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
117.4
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
116.4
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
115.4
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
115.1
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
114.8
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
114.0
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
110.1
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
105.3
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
103.6
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
103.2
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
102.6
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
101.8
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
100.7
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
100.1
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
100.1
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
100.1
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
99.8
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
97.5
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
97.4
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
96.9
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
96.5
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
96.1
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
96.0
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
94.0
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
93.9
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
92.9
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
92.6
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
91.8
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
90.3
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
90.1
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
88.7
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
88.7
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
87.8
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
87.5
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
87.2
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
87.1
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
86.9
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
86.5
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
85.6
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
85.4
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
84.9
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
83.4
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
83.4
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
82.9
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
82.4
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
81.9
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
81.8
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
81.3
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
80.6
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
79.6
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
79.4
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
79.4
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
79.3
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
79.1
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
78.6
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
78.2
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
77.7
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
77.3
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
77.3
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
76.5
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
75.8
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
73.9
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
73.8
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
73.8
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
73.1
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
72.5
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
71.5
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
71.1
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
69.8
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
69.8
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
69.4
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
69.4
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
69.4
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
69.1
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
67.9
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
67.6
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
67.5
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
67.0
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
66.7
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
65.6
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
65.2
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
65.0
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
63.4
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
60.2
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
59.9
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
58.8
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
58.6
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
58.6
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
58.1
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
58.1
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
57.9
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
57.6
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
57.2
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
56.7
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
55.7
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
55.3
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
54.2
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
53.6
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
53.6
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
53.5
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
53.5
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
53.0
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
52.4
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
51.9
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
51.8
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
50.8
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
50.8
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
50.5
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
50.0
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
49.0
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
48.5
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
48.5
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
48.2
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
47.9
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
47.7
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
45.5
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
44.2
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
44.2
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
44.1
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
43.5
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
43.4
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
43.4
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
39.4
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
38.3
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
38.0
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
37.6
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
37.1
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
36.2
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
36.0
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
35.9
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
33.1
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
31.0
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
30.9
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
29.5
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
29.5
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
27.6
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
26.5
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
26.4
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
25.3
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
22.9
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
22.4
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
21.8
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
21.4
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
20.4
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
19.5
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
18.7
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
18.0
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
14.2
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
12.3
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
11.9
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
11.8
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
11.8
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
11.2
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
7.9
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
7.8
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
6.6
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
5.2
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TGFBI is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
1115.3
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
7964.4
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
5876.3
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
5870.3
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
5867.4
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
5033.7
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
4860.6
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
4508.0
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
4404.9
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
3771.1
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
3575.9
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
3485.5
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
3432.8
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
3203.6
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
3128.8
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
2718.1
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
2700.6
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
2579.8
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
2273.5
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
2247.3
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
2220.1
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
2039.6
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
1914.7
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
1804.8
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
1484.7
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
1476.0
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
1438.1
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
1287.9
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
1176.9
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
1156.5
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
1082.1
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
1023.3
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
1010.4
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
1001.5
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
988.3
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
869.0
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
806.9
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
788.9
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
731.0
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
730.9
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
673.4
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
669.9
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
468.2
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
446.2
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
393.1
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
353.6
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
329.5
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
293.6
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
287.0
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
262.8
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
230.3
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
219.4
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
201.0
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
199.0
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
192.8
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
189.8
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
185.8
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
180.8
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
159.8
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
153.5
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
152.3
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
134.3
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
130.4
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
124.0
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
120.0
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
117.8
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
111.8
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
103.6
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
96.7
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
90.4
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
88.4
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
87.3
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
86.3
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
84.0
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
79.6
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
78.6
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
75.6
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
70.6
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
69.2
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
61.8
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
60.0
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
59.0
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
58.7
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
57.8
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
57.5
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
57.1
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
54.8
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
53.4
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
53.1
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
53.0
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
53.0
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
47.8
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
47.7
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
42.4
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
40.3
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
39.1
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
38.6
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
36.5
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
13.8
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
12.4
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TGFBI is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
104.2
Number of samples
282
Samples
Sample
Description
TPM
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
2702.5
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
805.1
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
583.2
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
487.8
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
375.3
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
358.6
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
346.3
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
344.1
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
337.8
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
327.0
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
312.2
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
307.0
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
301.0
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
280.8
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
269.5
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
268.0
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
264.9
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
255.8
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
245.7
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
237.0
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
231.3
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
227.9
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
206.1
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
205.8
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
203.8
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
199.0
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
193.2
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
190.5
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
183.7
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
181.6
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
173.9
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
173.1
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
170.6
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
169.7
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
168.8
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
168.4
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
165.9
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
165.1
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
161.2
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
160.5
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
158.6
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
157.1
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
155.6
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
153.0
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
151.8
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
150.4
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
149.7
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
144.9
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
144.8
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
144.6
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
144.3
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
143.6
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
143.1
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
142.8
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
141.4
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
139.4
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
139.2
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
136.0
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
135.1
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
133.5
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
133.2
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
131.0
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
130.5
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
128.3
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
128.0
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
126.7
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
126.5
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
124.1
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
122.1
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
121.9
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
120.7
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
120.4
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
120.2
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
119.4
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
118.5
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
116.0
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
115.8
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
114.2
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
113.6
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
111.3
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
109.4
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
108.1
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
107.7
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
107.6
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
107.5
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
106.9
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
105.7
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
105.5
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
104.4
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
102.1
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
100.8
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
100.6
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
100.4
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
99.6
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
99.2
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
98.6
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
96.2
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
95.8
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
95.5
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
95.4
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
94.8
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
94.1
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
91.6
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
90.8
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
90.0
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
89.8
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
87.9
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
86.9
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
86.8
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
86.8
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
86.4
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
85.8
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
85.3
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
85.2
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
85.2
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
84.4
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
84.1
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
83.8
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
82.0
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
80.9
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
80.2
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
79.8
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
79.5
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
77.3
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
77.2
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
76.8
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
75.8
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
75.7
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
75.5
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
75.0
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
75.0
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
74.8
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
74.0
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
73.9
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
73.9
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
73.7
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
72.7
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
72.5
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
72.5
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
72.3
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
71.6
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
71.6
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
71.4
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
70.9
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
70.6
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
69.7
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
68.2
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
68.0
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
67.4
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
67.1
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
66.7
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
66.4
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
66.1
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
66.1
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
65.5
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
65.1
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
64.7
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
64.7
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
64.7
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
64.2
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
64.2
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
64.0
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
62.8
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
62.1
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
62.0
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
60.7
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
60.4
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
60.4
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
59.9
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
59.6
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
58.9
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
58.7
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
58.2
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
57.7
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
57.2
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
56.3
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
56.0
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
55.6
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
55.1
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
54.9
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
54.2
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
53.6
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
53.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
52.5
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
52.0
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
51.3
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
51.1
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
51.0
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
51.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
51.0
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
50.6
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
50.6
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
49.5
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
47.8
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
47.3
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
47.0
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
46.9
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
46.0
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
45.9
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
44.9
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
44.8
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
44.2
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
44.1
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
43.8
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
42.5
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
41.9
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
41.9
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
41.5
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
40.7
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
40.4
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
40.1
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
39.8
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
39.7
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
39.5
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
39.1
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
38.6
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
38.4
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
38.3
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
38.2
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
37.9
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
37.5
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
37.3
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
36.0
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
35.7
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
35.5
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
35.2
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
35.1
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
34.5
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
34.5
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
34.4
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
34.3
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
33.5
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
33.3
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
32.4
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
31.3
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
30.5
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
30.3
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
29.9
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
28.8
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
28.1
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
27.4
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
26.9
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
25.9
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
25.7
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
25.1
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
23.4
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
23.3
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
22.8
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
22.7
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
21.6
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
21.2
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
20.6
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
20.4
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
20.0
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
19.9
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
19.1
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
16.3
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
15.7
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
15.0
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
14.6
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
14.1
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
14.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
13.6
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
13.5
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
12.8
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
12.0
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
11.5
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
11.4
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
10.4
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
10.3
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
9.7
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
9.3
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
9.3
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
8.9
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
8.4
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
7.3
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
6.7
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
6.0
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
4.1
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
3.2
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
2.3
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
1.1
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RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0076330003
Tumor
2.6
CPT0065690003
Tumor
2.0
CPT0078510003
Tumor
1.9
CPT0084560003
Tumor
1.8
CPT0015910003
Tumor
1.8
CPT0063630003
Tumor
1.7
CPT0014160003
Tumor
1.6
CPT0001260009
Tumor
1.5
CPT0081600003
Tumor
1.5
CPT0075560003
Tumor
1.4
CPT0011240003
Tumor
1.4
CPT0069000003
Tumor
1.3
CPT0086030003
Tumor
1.2
CPT0002350011
Tumor
1.2
CPT0088630003
Tumor
1.2
CPT0081990003
Tumor
1.1
CPT0079230003
Tumor
1.1
CPT0007860003
Tumor
1.1
CPT0066480003
Tumor
1.0
CPT0021240003
Tumor
1.0
CPT0025290003
Tumor
0.9
CPT0012080003
Tumor
0.9
CPT0092730003
Tumor
0.9
CPT0000640003
Tumor
0.8
CPT0019990003
Tumor
0.8
CPT0025050003
Tumor
0.8
CPT0069160003
Tumor
0.7
CPT0092290003
Tumor
0.7
CPT0023350003
Tumor
0.7
CPT0077310003
Tumor
0.6
CPT0065750003
Tumor
0.6
CPT0092190003
Normal
0.5
CPT0012670003
Tumor
0.5
CPT0017410003
Tumor
0.5
CPT0012280003
Tumor
0.5
CPT0025170003
Tumor
0.4
CPT0075130003
Tumor
0.4
CPT0017850003
Tumor
0.4
CPT0085670003
Tumor
0.4
CPT0020120003
Tumor
0.4
CPT0009000003
Tumor
0.3
CPT0025110003
Tumor
0.3
CPT0066470004
Tumor
0.3
CPT0025230003
Tumor
0.2
CPT0088900003
Tumor
0.2
CPT0071150004
Tumor
0.2
CPT0010120001
Normal
0.2
CPT0088760003
Tumor
0.2
CPT0079380003
Tumor
0.1
CPT0075720003
Tumor
0.1
CPT0079510001
Normal
0.1
CPT0000870016
Tumor
0.1
CPT0065930003
Tumor
0.0
CPT0001220008
Tumor
0.0
CPT0000890001
Normal
0.0
CPT0063320003
Tumor
0.0
CPT0001180009
Tumor
0.0
CPT0079300001
Normal
0.0
CPT0081880003
Tumor
0.0
CPT0086820003
Tumor
0.0
CPT0012900004
Tumor
0.0
CPT0092790003
Tumor
0.0
CPT0077320001
Normal
0.0
CPT0019130003
Tumor
0.0
CPT0001540009
Tumor
-0.1
CPT0084590001
Normal
-0.1
CPT0012370003
Tumor
-0.1
CPT0023690003
Tumor
-0.2
CPT0010160003
Tumor
-0.2
CPT0000660001
Normal
-0.2
CPT0013790003
Normal
-0.2
CPT0075170001
Normal
-0.2
CPT0010110003
Tumor
-0.2
CPT0089020003
Tumor
-0.2
CPT0065870003
Tumor
-0.2
CPT0076350001
Normal
-0.2
CPT0079410003
Tumor
-0.2
CPT0006900003
Tumor
-0.3
CPT0088480003
Tumor
-0.3
CPT0092160003
Tumor
-0.3
CPT0024670003
Tumor
-0.3
CPT0089460004
Tumor
-0.3
CPT0007320003
Tumor
-0.3
CPT0086950003
Tumor
-0.3
CPT0069190001
Normal
-0.3
CPT0001340003
Tumor
-0.3
CPT0007470001
Normal
-0.3
CPT0069010001
Normal
-0.3
CPT0077490003
Tumor
-0.3
CPT0014370004
Tumor
-0.3
CPT0077110003
Tumor
-0.3
CPT0020130001
Normal
-0.3
CPT0014470001
Normal
-0.3
CPT0000780007
Tumor
-0.4
CPT0020020001
Normal
-0.4
CPT0064370003
Tumor
-0.4
CPT0025060001
Normal
-0.4
CPT0077140001
Normal
-0.4
CPT0088500001
Normal
-0.4
CPT0001270001
Normal
-0.4
CPT0088570001
Normal
-0.4
CPT0079270003
Tumor
-0.4
CPT0002370001
Normal
-0.4
CPT0001230001
Normal
-0.4
CPT0012920003
Normal
-0.4
CPT0086870003
Tumor
-0.4
CPT0078930003
Tumor
-0.4
CPT0015730003
Tumor
-0.4
CPT0025880003
Tumor
-0.4
CPT0006440003
Tumor
-0.5
CPT0086830003
Normal
-0.5
CPT0018250001
Normal
-0.5
CPT0009060003
Tumor
-0.5
CPT0010170001
Normal
-0.5
CPT0066520001
Normal
-0.5
CPT0025920001
Normal
-0.5
CPT0012640003
Normal
-0.5
CPT0075570001
Normal
-0.5
CPT0081620001
Normal
-0.5
CPT0009080003
Normal
-0.5
CPT0012290003
Normal
-0.5
CPT0065430003
Tumor
-0.5
CPT0012570003
Normal
-0.5
CPT0065820001
Normal
-0.5
CPT0088690003
Tumor
-0.5
CPT0025610001
Normal
-0.5
CPT0025580004
Tumor
-0.5
CPT0015810003
Tumor
-0.6
CPT0009020003
Normal
-0.6
CPT0007870001
Normal
-0.6
CPT0001510001
Normal
-0.6
CPT0064400001
Normal
-0.6
CPT0006530001
Normal
-0.6
CPT0086360003
Tumor
-0.6
CPT0012090003
Normal
-0.6
CPT0078530001
Normal
-0.6
CPT0082010001
Normal
-0.6
CPT0019160001
Normal
-0.6
CPT0086970003
Normal
-0.6
CPT0079480003
Tumor
-0.6
CPT0063640001
Normal
-0.6
CPT0017450001
Normal
-0.6
CPT0078940001
Normal
-0.6
CPT0063330001
Normal
-0.6
CPT0092310003
Normal
-0.6
CPT0025350003
Tumor
-0.7
CPT0077500001
Normal
-0.7
CPT0087040003
Tumor
-0.7
CPT0014130001
Normal
-0.7
CPT0088710001
Normal
-0.7
CPT0001190001
Normal
-0.7
CPT0023360001
Normal
-0.7
CPT0079000001
Normal
-0.7
CPT0006950001
Normal
-0.7
CPT0088780001
Normal
-0.7
CPT0089040001
Normal
-0.7
CPT0078670001
Normal
-0.8
CPT0006630003
Tumor
-0.8
CPT0001500009
Tumor
-0.8
CPT0026420001
Normal
-0.8
CPT0078990003
Tumor
-0.8
CPT0086890003
Normal
-0.8
CPT0001550001
Normal
-0.9
CPT0014350001
Normal
-0.9
CPT0011410003
Tumor
-0.9
CPT0092800003
Normal
-0.9
CPT0006730001
Normal
-0.9
CPT0012770003
Normal
-0.9
CPT0092740003
Normal
-0.9
CPT0000790001
Normal
-1.0
CPT0089480003
Normal
-1.0
CPT0078660003
Tumor
-1.0
CPT0078840001
Normal
-1.0
CPT0087050003
Normal
-1.0
CPT0012180003
Tumor
-1.0
CPT0023710001
Normal
-1.0
CPT0066430001
Normal
-1.0
CPT0026410003
Tumor
-1.0
CPT0088640003
Normal
-1.0
CPT0079430001
Normal
-1.0
CPT0065810003
Tumor
-1.0
CPT0024680001
Normal
-1.0
CPT0088920001
Normal
-1.0
CPT0012550003
Tumor
-1.1
CPT0001350001
Normal
-1.1
CPT0014450004
Tumor
-1.2
CPT0078830003
Tumor
-1.2
CPT0088550004
Tumor
-1.2
CPT0086370003
Normal
-1.3
CPT0079180003
Tumor
-1.3
CPT0002270011
Tumor
-1.3
CPT0065450001
Normal
-1.3
CPT0078800003
Tumor
-1.5
CPT0088970003
Tumor
-1.7
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
