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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PDZD11 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
50.4
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
98.5
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
87.8
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
80.9
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
75.7
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
70.4
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
68.1
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
67.8
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
66.8
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
63.6
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
63.2
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
61.1
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
61.1
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
59.8
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
59.8
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
58.9
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
58.3
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
58.2
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
57.9
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
57.3
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
57.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
56.7
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
54.8
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
53.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
52.9
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
52.3
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
51.4
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
50.9
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
49.9
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
49.0
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
48.8
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
48.6
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
48.4
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
48.2
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
48.1
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
47.7
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
47.1
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
46.2
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
46.1
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
45.8
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
45.0
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
44.9
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
44.5
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
43.9
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
43.4
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
43.1
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
42.5
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
41.3
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
40.9
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
40.7
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
40.2
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
39.7
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
39.5
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
39.3
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
39.2
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
39.1
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
38.6
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
36.3
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
35.3
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
34.0
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
33.6
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
31.5
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
29.6
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
22.6
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PDZD11 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
49.1
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
144.0
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
132.2
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
122.1
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
117.9
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
112.4
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
100.1
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
96.2
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
95.9
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
86.8
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
86.5
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
85.9
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
83.4
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
82.0
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
81.6
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
80.8
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
80.6
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
80.5
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
79.2
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
78.5
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
76.5
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
76.5
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
75.9
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
74.7
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
74.5
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
73.3
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
72.3
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
72.3
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
72.2
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
72.1
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
71.6
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
71.4
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
71.4
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
71.0
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
70.7
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
70.7
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
70.1
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
68.7
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
67.8
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
67.4
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
66.6
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
66.3
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
65.4
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
65.2
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
64.8
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
64.5
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
64.5
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
64.3
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
64.2
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
64.2
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
63.9
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
63.7
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
63.4
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
63.3
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
62.7
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
62.6
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
62.5
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
62.2
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
62.0
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
62.0
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
61.7
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
61.5
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
61.5
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
61.4
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
61.2
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
61.2
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
61.1
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
61.0
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
61.0
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
60.9
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
60.7
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
60.6
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
60.4
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
60.4
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
60.2
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
60.1
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
60.0
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
59.6
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
59.5
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
59.5
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
59.4
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
59.3
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
59.0
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
58.6
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
58.5
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
58.5
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
58.4
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
58.3
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
58.3
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
57.9
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
57.9
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
57.8
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
57.7
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
57.6
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
57.6
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
57.5
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
57.4
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
57.4
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
57.4
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
57.2
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
57.2
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
57.1
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
57.1
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
56.9
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
56.9
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
56.9
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
56.7
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
56.5
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
56.5
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
56.4
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
56.4
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
56.0
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
56.0
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
55.9
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
55.8
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
55.7
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
55.7
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
55.7
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
55.7
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
55.4
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
55.3
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
55.3
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
55.3
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
55.1
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
55.1
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
54.8
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
54.7
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
54.7
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
54.6
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
54.6
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
54.5
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
54.4
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
54.4
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
54.4
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
54.3
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
54.3
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
54.3
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
54.2
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
54.2
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
54.0
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
54.0
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
54.0
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
54.0
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
53.9
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
53.8
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
53.7
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
53.7
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
53.6
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
53.6
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
53.5
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
53.4
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
53.1
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
53.1
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
53.1
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
52.9
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
52.9
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
52.9
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
52.6
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
52.5
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
52.4
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
52.4
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
52.4
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
52.3
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
52.2
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
51.9
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
51.9
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
51.8
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
51.8
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
51.8
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
51.7
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
51.7
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
51.7
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
51.6
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
51.6
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
51.6
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
51.4
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
51.4
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
51.3
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
51.2
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
51.1
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
51.1
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
51.1
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
51.1
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
51.1
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
51.0
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
51.0
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
51.0
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
50.9
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
50.9
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
50.9
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
50.8
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
50.7
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
50.7
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
50.6
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
50.6
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
50.6
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
50.6
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
50.5
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
50.4
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
50.4
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
50.4
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
50.4
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
50.4
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
50.3
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
50.3
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
50.2
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
50.1
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
49.9
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
49.9
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
49.8
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
49.7
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
49.6
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
49.5
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
49.3
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
49.3
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
49.3
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
49.1
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
49.1
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
49.0
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
48.9
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
48.9
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
48.9
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
48.9
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
48.8
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
48.8
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
48.7
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
48.7
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
48.7
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
48.6
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
48.6
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
48.6
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
48.6
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
48.6
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
48.6
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
48.6
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
48.4
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
48.4
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
48.4
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
48.4
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
48.3
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
48.3
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
48.2
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
48.0
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
47.9
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
47.9
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
47.8
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
47.8
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
47.7
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
47.7
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
47.6
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
47.6
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
47.6
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
47.4
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
47.4
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
47.2
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
47.1
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
47.1
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
47.1
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
46.8
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
46.4
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
46.3
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
46.3
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
46.3
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
46.3
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
46.2
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
46.2
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
46.1
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
46.1
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
46.0
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
46.0
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
46.0
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
45.9
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
45.9
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
45.9
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
45.9
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
45.8
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
45.8
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
45.8
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
45.8
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
45.8
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
45.8
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
45.7
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
45.7
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
45.7
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
45.7
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
45.7
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
45.6
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
45.6
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
45.6
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
45.6
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
45.5
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
45.5
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
45.5
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
45.5
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
45.4
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
45.4
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
45.4
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
45.3
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
45.3
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
45.3
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
45.2
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
45.1
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
45.1
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
45.1
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
45.0
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
44.9
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
44.9
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
44.8
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
44.6
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
44.6
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
44.6
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
44.6
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
44.6
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
44.5
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
44.4
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
44.2
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
44.2
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
44.2
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
44.2
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
44.2
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
44.2
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
44.2
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
44.1
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
44.1
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
44.0
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
43.9
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
43.8
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
43.8
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
43.7
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
43.6
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
43.6
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
43.6
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
43.6
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
43.6
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
43.5
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
43.3
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
43.2
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
43.2
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
43.1
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
43.1
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
43.1
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
43.1
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
43.1
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
43.0
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
43.0
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
43.0
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
43.0
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
43.0
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
43.0
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
43.0
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
42.9
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
42.8
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
42.8
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
42.8
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
42.8
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
42.8
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
42.7
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
42.7
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
42.7
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
42.6
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
42.6
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
42.5
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
42.5
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
42.4
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
42.4
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
42.3
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
42.3
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
42.3
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
42.3
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
42.2
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
42.2
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
42.2
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
42.1
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
42.1
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
42.0
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
42.0
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
41.9
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
41.9
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
41.8
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
41.8
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
41.7
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
41.7
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
41.7
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
41.6
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
41.6
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
41.5
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
41.5
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
41.3
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
41.3
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
41.2
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
41.2
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
41.2
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
41.2
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
41.1
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
40.8
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
40.7
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
40.7
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
40.7
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
40.6
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
40.6
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
40.5
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
40.5
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
40.5
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
40.4
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
40.4
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
40.3
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
40.3
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
40.3
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
40.3
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
40.3
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
40.2
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
40.2
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
40.2
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
40.1
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
40.1
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
40.1
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
40.1
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
40.1
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
40.1
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
39.9
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
39.8
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
39.7
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
39.7
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
39.7
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
39.6
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
39.5
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
39.4
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
39.3
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
39.3
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
39.2
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
39.1
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
39.1
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
39.0
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
39.0
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
39.0
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
39.0
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
39.0
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
38.9
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
38.8
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
38.4
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
38.2
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
38.2
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
38.1
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
38.1
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
38.0
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
38.0
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
37.9
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
37.9
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
37.7
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
37.4
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
37.4
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
37.2
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
37.1
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
37.0
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
37.0
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
36.9
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
36.9
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
36.9
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
36.9
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
36.8
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
36.6
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
36.6
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
36.3
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
36.3
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
36.1
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
36.1
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
36.0
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
36.0
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
35.9
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
35.9
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
35.7
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
35.7
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
35.5
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
35.2
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
35.2
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
35.1
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
35.1
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
34.9
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
34.8
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
34.7
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
34.6
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
34.5
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
34.5
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
34.5
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
33.7
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
33.5
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
33.5
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
33.4
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
33.4
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
33.4
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
33.3
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
33.2
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
33.0
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
32.7
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
32.5
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
32.3
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
32.2
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
31.5
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
31.4
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
31.3
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
31.1
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
31.0
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
31.0
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
30.8
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
30.3
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
30.1
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
30.1
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
29.8
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
29.6
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
29.4
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
28.9
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
28.0
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
27.8
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
26.5
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
26.4
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
26.0
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
22.5
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
21.8
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
21.7
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
19.9
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
18.5
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PDZD11 is potential prognostic, high expression is unfavorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
44.5
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
89.5
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
87.2
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
83.1
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
68.1
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
65.8
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
65.6
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
64.6
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
63.9
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
63.3
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
60.2
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
60.1
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
58.5
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
58.4
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
57.8
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
55.9
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
54.8
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
53.5
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
53.4
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
52.4
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
51.0
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
50.4
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
50.1
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
50.0
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
49.4
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
49.1
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
49.1
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
47.4
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
46.8
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
46.5
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
46.4
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
46.2
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
46.0
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
45.7
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
45.5
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
45.1
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
45.0
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
45.0
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
44.9
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
44.8
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
44.7
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
44.7
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
44.5
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
44.4
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
44.2
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
44.1
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
43.7
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
42.8
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
42.7
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
42.4
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
42.3
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
42.2
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
42.2
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
42.0
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
41.3
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
41.2
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
41.1
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
40.9
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
40.0
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
39.9
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
39.7
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
38.9
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
38.8
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
38.8
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
38.7
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
38.6
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
38.6
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
38.5
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
38.3
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
38.2
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
38.1
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
37.4
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
37.2
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
36.9
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
36.9
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
36.7
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
36.5
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
36.5
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
36.4
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
36.4
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
36.0
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
35.2
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
35.1
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
35.0
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
35.0
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
34.7
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
34.6
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
34.5
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
34.4
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
34.4
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
34.3
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
34.0
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
32.8
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
32.6
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
32.1
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
31.7
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
30.4
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
29.9
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
27.4
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
25.8
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PDZD11 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
51.1
Number of samples
282
Samples
Sample
Description
TPM
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
120.5
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
106.9
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
101.6
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
99.5
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
93.1
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
90.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
86.6
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
85.5
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
85.3
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
82.3
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
81.5
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
79.7
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
78.9
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
77.0
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
76.7
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
76.1
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
75.7
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
75.4
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
74.3
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
73.9
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
73.6
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
73.0
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
72.9
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
72.1
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
72.1
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
71.9
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
71.3
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
71.2
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
70.5
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
70.5
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
70.4
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
69.9
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
69.5
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
69.4
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
69.0
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
69.0
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
68.2
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
68.1
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
68.0
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
67.7
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
67.3
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
67.3
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
67.2
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
66.3
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
65.2
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
65.0
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
64.5
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
64.2
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
64.0
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
63.9
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
63.7
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
63.5
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
62.7
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
62.6
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
62.1
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
62.0
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
61.8
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
61.8
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
61.4
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
61.3
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
61.0
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
60.9
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
60.7
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
60.6
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
60.3
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
60.2
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
60.2
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
60.0
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
59.9
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
59.9
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
59.8
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
59.7
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
59.6
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
59.3
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
58.9
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
58.9
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
58.9
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
58.7
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
58.6
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
58.5
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
58.5
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
58.4
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
58.4
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
58.2
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
57.3
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
57.3
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
57.2
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
57.1
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
57.1
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
56.9
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
56.9
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
56.9
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
56.7
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
56.7
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
56.5
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
56.5
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
56.5
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
56.3
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
56.2
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
56.1
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
56.1
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
55.9
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
55.7
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
55.6
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
55.6
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
55.5
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
55.5
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
55.3
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
55.1
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
54.8
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
54.6
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
54.6
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
54.5
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
54.4
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
54.2
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
54.2
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
54.1
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
53.9
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
53.8
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
53.8
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
53.8
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
53.7
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
53.3
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
53.0
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
52.9
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
52.9
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
52.8
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
52.8
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
52.6
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
52.6
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
52.5
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
52.4
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
52.3
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
52.1
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
52.1
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
52.0
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
51.9
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
51.8
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
51.7
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
51.6
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
51.6
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
51.6
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
51.3
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
51.2
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
51.2
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
51.1
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
50.6
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
50.6
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
50.4
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
50.4
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
50.3
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
50.0
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
49.8
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
49.5
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
49.4
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
49.4
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
49.0
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
49.0
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
48.4
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
48.2
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
48.2
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
47.8
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
47.7
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
47.6
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
47.4
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
47.3
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
47.2
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
47.1
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
47.0
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
47.0
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
46.9
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
46.9
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
46.8
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
46.7
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
46.4
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
46.1
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
45.9
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
45.9
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
45.7
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
45.6
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
45.5
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
45.5
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
45.1
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
45.1
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
45.0
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
44.9
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
44.9
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
44.9
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
44.8
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
44.2
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
44.2
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
44.1
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
44.1
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
44.0
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
43.9
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
43.4
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
43.2
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
43.2
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
43.0
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
42.8
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
42.8
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
42.7
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
42.6
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
42.2
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
42.2
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
41.8
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
41.6
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
41.4
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
41.3
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
41.3
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
41.2
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
41.1
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
41.0
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
40.8
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
40.5
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
40.3
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
40.2
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
40.1
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
40.1
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
40.0
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
40.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
39.8
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
39.6
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
39.6
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
39.3
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
39.0
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
38.9
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
38.8
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
38.6
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
38.3
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
38.3
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
37.8
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
37.6
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
37.4
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
37.4
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
36.9
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
36.7
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
36.1
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
36.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
35.5
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
35.4
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
35.3
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
35.1
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
34.3
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
33.4
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
33.3
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
33.0
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
32.8
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
32.5
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
32.4
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
30.6
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
30.1
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
29.9
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
29.5
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
29.3
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
29.3
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
29.3
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
29.1
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
28.8
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
28.1
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
27.3
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
27.1
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
26.5
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
26.4
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
26.2
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
26.2
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
26.1
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
25.8
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
23.3
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
22.7
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
22.6
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
22.3
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
21.8
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
20.8
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
20.6
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
20.6
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
20.4
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
20.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
19.6
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
18.6
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
18.2
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
16.5
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0012550003
Tumor
0.6
CPT0014450004
Tumor
0.6
CPT0012770003
Normal
0.5
CPT0087050003
Normal
0.5
CPT0088780001
Normal
0.5
CPT0012900004
Tumor
0.5
CPT0065450001
Normal
0.5
CPT0006730001
Normal
0.5
CPT0009080003
Normal
0.5
CPT0092740003
Normal
0.4
CPT0077140001
Normal
0.4
CPT0026420001
Normal
0.4
CPT0024670003
Tumor
0.4
CPT0002270011
Tumor
0.4
CPT0076350001
Normal
0.4
CPT0066430001
Normal
0.4
CPT0092800003
Normal
0.4
CPT0012570003
Normal
0.3
CPT0007470001
Normal
0.3
CPT0015730003
Tumor
0.3
CPT0078840001
Normal
0.3
CPT0086370003
Normal
0.3
CPT0025060001
Normal
0.3
CPT0023710001
Normal
0.3
CPT0078800003
Tumor
0.3
CPT0081620001
Normal
0.3
CPT0024680001
Normal
0.3
CPT0092290003
Tumor
0.3
CPT0012090003
Normal
0.3
CPT0077310003
Tumor
0.3
CPT0078530001
Normal
0.3
CPT0023360001
Normal
0.3
CPT0006950001
Normal
0.3
CPT0065810003
Tumor
0.3
CPT0089480003
Normal
0.3
CPT0025610001
Normal
0.3
CPT0086360003
Tumor
0.3
CPT0001500009
Tumor
0.3
CPT0007870001
Normal
0.3
CPT0077500001
Normal
0.3
CPT0000790001
Normal
0.3
CPT0014350001
Normal
0.3
CPT0088920001
Normal
0.2
CPT0086970003
Normal
0.2
CPT0088710001
Normal
0.2
CPT0092310003
Normal
0.2
CPT0089040001
Normal
0.2
CPT0013790003
Normal
0.2
CPT0066470004
Tumor
0.2
CPT0020020001
Normal
0.2
CPT0012280003
Tumor
0.2
CPT0078670001
Normal
0.2
CPT0069010001
Normal
0.2
CPT0010170001
Normal
0.2
CPT0065750003
Tumor
0.2
CPT0014130001
Normal
0.2
CPT0000890001
Normal
0.2
CPT0020130001
Normal
0.2
CPT0007860003
Tumor
0.2
CPT0010160003
Tumor
0.2
CPT0088480003
Tumor
0.2
CPT0079430001
Normal
0.2
CPT0018250001
Normal
0.2
CPT0019990003
Tumor
0.2
CPT0063320003
Tumor
0.2
CPT0025920001
Normal
0.2
CPT0006630003
Tumor
0.1
CPT0075570001
Normal
0.1
CPT0019160001
Normal
0.1
CPT0086030003
Tumor
0.1
CPT0001510001
Normal
0.1
CPT0020120003
Tumor
0.1
CPT0078940001
Normal
0.1
CPT0009020003
Normal
0.1
CPT0065820001
Normal
0.1
CPT0063640001
Normal
0.1
CPT0001550001
Normal
0.1
CPT0001350001
Normal
0.1
CPT0079480003
Tumor
0.1
CPT0025170003
Tumor
0.1
CPT0079000001
Normal
0.1
CPT0092790003
Tumor
0.1
CPT0064400001
Normal
0.1
CPT0088900003
Tumor
0.1
CPT0019130003
Tumor
0.1
CPT0065430003
Tumor
0.1
CPT0012290003
Normal
0.1
CPT0088640003
Normal
0.1
CPT0012920003
Normal
0.1
CPT0087040003
Tumor
0.1
CPT0088570001
Normal
0.1
CPT0086950003
Tumor
0.1
CPT0079410003
Tumor
0.1
CPT0011410003
Tumor
0.1
CPT0071150004
Tumor
0.0
CPT0001220008
Tumor
0.0
CPT0066520001
Normal
0.0
CPT0086820003
Tumor
0.0
CPT0002370001
Normal
0.0
CPT0000780007
Tumor
0.0
CPT0025290003
Tumor
0.0
CPT0017450001
Normal
0.0
CPT0012370003
Tumor
0.0
CPT0014160003
Tumor
0.0
CPT0065930003
Tumor
0.0
CPT0082010001
Normal
0.0
CPT0086890003
Normal
0.0
CPT0014470001
Normal
0.0
CPT0006900003
Tumor
0.0
CPT0064370003
Tumor
0.0
CPT0089460004
Tumor
0.0
CPT0065690003
Tumor
0.0
CPT0066480003
Tumor
0.0
CPT0081880003
Tumor
0.0
CPT0077110003
Tumor
0.0
CPT0006440003
Tumor
0.0
CPT0009000003
Tumor
0.0
CPT0065870003
Tumor
0.0
CPT0015810003
Tumor
0.0
CPT0009060003
Tumor
0.0
CPT0007320003
Tumor
0.0
CPT0000660001
Normal
0.0
CPT0010120001
Normal
0.0
CPT0078510003
Tumor
0.0
CPT0001230001
Normal
-0.1
CPT0010110003
Tumor
-0.1
CPT0063630003
Tumor
-0.1
CPT0006530001
Normal
-0.1
CPT0063330001
Normal
-0.1
CPT0088500001
Normal
-0.1
CPT0000870016
Tumor
-0.1
CPT0088970003
Tumor
-0.1
CPT0014370004
Tumor
-0.1
CPT0078930003
Tumor
-0.1
CPT0012640003
Normal
-0.1
CPT0001540009
Tumor
-0.1
CPT0011240003
Tumor
-0.1
CPT0086830003
Normal
-0.1
CPT0025580004
Tumor
-0.1
CPT0001180009
Tumor
-0.1
CPT0015910003
Tumor
-0.1
CPT0075130003
Tumor
-0.1
CPT0025350003
Tumor
-0.1
CPT0081990003
Tumor
-0.2
CPT0079270003
Tumor
-0.2
CPT0092160003
Tumor
-0.2
CPT0000640003
Tumor
-0.2
CPT0079230003
Tumor
-0.2
CPT0001190001
Normal
-0.2
CPT0025050003
Tumor
-0.2
CPT0023690003
Tumor
-0.2
CPT0075170001
Normal
-0.2
CPT0023350003
Tumor
-0.2
CPT0021240003
Tumor
-0.2
CPT0077490003
Tumor
-0.2
CPT0012670003
Tumor
-0.2
CPT0079180003
Tumor
-0.2
CPT0025230003
Tumor
-0.2
CPT0088760003
Tumor
-0.2
CPT0075560003
Tumor
-0.2
CPT0076330003
Tumor
-0.2
CPT0084590001
Normal
-0.2
CPT0001270001
Normal
-0.2
CPT0017410003
Tumor
-0.2
CPT0085670003
Tumor
-0.2
CPT0077320001
Normal
-0.3
CPT0026410003
Tumor
-0.3
CPT0001340003
Tumor
-0.3
CPT0078830003
Tumor
-0.3
CPT0069190001
Normal
-0.3
CPT0088690003
Tumor
-0.3
CPT0025110003
Tumor
-0.3
CPT0089020003
Tumor
-0.3
CPT0002350011
Tumor
-0.3
CPT0079300001
Normal
-0.3
CPT0079510001
Normal
-0.3
CPT0075720003
Tumor
-0.3
CPT0079380003
Tumor
-0.4
CPT0017850003
Tumor
-0.4
CPT0069000003
Tumor
-0.4
CPT0012080003
Tumor
-0.4
CPT0025880003
Tumor
-0.4
CPT0081600003
Tumor
-0.4
CPT0001260009
Tumor
-0.4
CPT0078990003
Tumor
-0.4
CPT0069160003
Tumor
-0.5
CPT0078660003
Tumor
-0.5
CPT0012180003
Tumor
-0.5
CPT0092190003
Normal
-0.6
CPT0088630003
Tumor
-0.6
CPT0092730003
Tumor
-0.6
CPT0086870003
Tumor
-0.6
CPT0084560003
Tumor
-0.7
CPT0088550004
Tumor
-1.1
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
