HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:55.2 nTPM
HPA Brain:26.1 nTPM
GTEx:55.2 nTPM
FANTOM5:54.8 Scaled Tags Per Million
Pig:27.1 nTPM
Mouse:59.0 nTPM
Allen mouse:13.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003972
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 26.1
Sample id Sample description nTPM
Hippocampus
nTPM: 26.1
1898 Male, age 80, left hemisphere 30.5
2529 Female, age 94, left hemisphere 28.5
1855 Male, age 76, left hemisphere 24.9
2148 Female, age 91, left hemisphere 24.6
2621 Female, age 67, right hemisphere 24.4
1911 Female, age 85, right hemisphere 23.4
Dentate gyrus
nTPM: 23.2
1927 Female, age 91, both hemispheres 26.8
2010 Male, age 76, both hemispheres 26.1
2246 Female, age 85, both hemispheres 24.3
2528 Male, age 74, both hemispheres 23.9
2530 Female, age 94, left hemisphere 21.3
2531 Female, age 67, both hemispheres 16.8
Entorhinal gyrus
nTPM: 21.3
1938 Female, age 85, left hemisphere 26.6
2764 Male, age 80, right hemisphere 24.4
2117 Female, age 91, right hemisphere 23.4
1787 Male, age 76, left hemisphere 21.4
2686 Male, age 75, right hemisphere 16.2
2613 Female, age 94, left hemisphere 15.9
Hippocampus, CA1
nTPM: 25.4
2749 Male, age 80, left hemisphere 35.0
2527 Male, age 74, both hemispheres 27.8
1873 Female, age 85, both hemispheres 23.5
2045 Male, age 76, both hemispheres 20.8
2082 Female, age 91, right hemisphere 19.7
Hippocampus, CA2
nTPM: 25.1
1892 Male, age 76, both hemispheres 31.2
2249 Male, age 74, both hemispheres 29.6
1963 Male, age 80, left hemisphere 27.7
2437 Female, age 94, left hemisphere 21.9
2113 Female, age 91, right hemisphere 20.7
1940 Female, age 85, left hemisphere 19.4
Hippocampus, CA3
nTPM: 25.2
2436 Male, age 74, both hemispheres 36.2
2137 Male, age 80, left hemisphere 30.1
1867 Male, age 76, both hemispheres 28.9
1891 Female, age 85, both hemispheres 21.6
2620 Female, age 94, left hemisphere 19.9
2861 Female, age 67, both hemispheres 14.4
Parahippocampal cortex
nTPM: 23.5
1850 Male, age 80, both hemispheres 26.8
2250 Female, age 67, right hemisphere 26.5
2245 Female, age 91, both hemispheres 26.1
1933 Female, age 85, both hemispheres 23.8
1990 Female, age 91, right hemisphere 23.7
2532 Female, age 72, left hemisphere 22.7
2018 Male, age 76, both hemispheres 22.2
2622 Female, age 67, right hemisphere 21.8
2692 Male, age 74, both hemispheres 20.9
2693 Female, age 94, both hemispheres 20.4
Perirhinal gyrus
nTPM: 25.0
1847 Female, age 91, left hemisphere 29.6
1841 Female, age 85, right hemisphere 26.8
2521 Female, age 94, right hemisphere 24.9
1794 Male, age 80, right hemisphere 24.4
2848 Male, age 76, right hemisphere 19.4
Subiculum
nTPM: 23.9
1901 Male, age 80, both hemispheres 26.3
2438 Female, age 94, left hemisphere 25.5
2619 Male, age 74, both hemispheres 25.5
1977 Female, age 85, both hemispheres 24.3
2729 Female, age 91, right hemisphere 21.3
2042 Male, age 76, both hemispheres 20.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 55.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 55.2
Samples: 197

Max nTPM: 120.4
Min nTPM: 23.6
Std nTPM: 16.0
Median nTPM: 53.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 120.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 119.4
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 109.6
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 103.3
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 101.3
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 90.6
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 90.0
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 85.6
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 84.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 83.9
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 81.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 54.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 54.8
FF:10169-103B7 60 years, female 67.5
FF:10153-102I9 76 years, female 42.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 27.1
Pig sample Sample description nTPM
Subiculum
nTPM: 24.1
Samples: 4

Max nTPM: 28.5
Min nTPM: 18.8
Sample A Female 28.5
Sample B Female 24.5
Sample C Male 24.7
Sample D Male 18.8
Dorsal hippocampus
nTPM: 26.8
Samples: 4

Max nTPM: 33.7
Min nTPM: 19.9
Sample A Female 33.7
Sample B Female 26.4
Sample C Male 27.1
Sample D Male 19.9
Entorhinal cortex
nTPM: 22.1
Samples: 4

Max nTPM: 25.2
Min nTPM: 17.7
Sample A Female 25.2
Sample B Female 22.1
Sample C Male 23.4
Sample D Male 17.7
Ventral hippocampus
nTPM: 27.1
Samples: 4

Max nTPM: 34.4
Min nTPM: 19.6
Sample A Female 27.1
Sample B Female 19.6
Sample C Male 34.4
Sample D Male 27.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 59.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 57.7
Samples: 4

Max nTPM: 64.7
Min nTPM: 53.9
Sample A Male 53.9
Sample B Male 58.4
Sample C Female 64.7
Sample D Female 53.9
Hippocampal formation
nTPM: 59.0
Samples: 4

Max nTPM: 65.4
Min nTPM: 53.4
Sample A Male 65.4
Sample B Male 53.4
Sample C Female 58.1
Sample D Female 58.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 13.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 13.4
545089 Antisense, RP_040810_02_H08, Mouse strain C57BL/6J (56 days, male) 13.4

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