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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
63.3
nTPM
HPA Brain:
26.9
nTPM
GTEx:
63.3
nTPM
FANTOM5:
40.1
Scaled Tags Per Million
Pig:
22.4
nTPM
Mouse:
59.1
nTPM
Allen mouse:
13.2
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
26.9
Sample id
Sample description
nTPM
Amygdala nTPM: 26.9
2814
Male, age 76, right hemisphere
38.8
2514
Male, age 75, right hemisphere
27.2
1987
Female, age 91, left hemisphere
26.3
2695
Female, age 67, right hemisphere
22.8
2517
Female, age 94, left hemisphere
19.6
Basal amygdala nTPM: 21.6
1955
Male, age 76, both hemispheres
31.2
2609
Male, age 75, right hemisphere
26.2
2110
Male, age 80, left hemisphere
22.1
2243
Female, age 91, right hemisphere
21.7
2685
Female, age 94, left hemisphere
18.4
2827
Female, age 67, right hemisphere
10.0
Central amygdala nTPM: 24.0
1905
Male, age 76, both hemispheres
35.2
2515
Male, age 75, right hemisphere
24.3
2239
Male, age 80, left hemisphere
21.8
2701
Female, age 91, right hemisphere
21.0
2826
Female, age 94, left hemisphere
17.6
Corticomedial amygdala nTPM: 24.5
2240
Male, age 76, both hemispheres
30.9
2428
Male, age 75, right hemisphere
29.1
2829
Male, age 80, left hemisphere
25.7
2242
Female, age 91, right hemisphere
25.6
2429
Female, age 94, left hemisphere
23.3
2535
Female, age 67, right hemisphere
12.2
Lateral amygdala nTPM: 20.6
1883
Male, age 76, both hemispheres
31.9
2516
Male, age 75, right hemisphere
24.1
2534
Female, age 94, left hemisphere
20.2
2255
Female, age 91, right hemisphere
18.6
2256
Male, age 80, left hemisphere
17.1
2830
Female, age 67, right hemisphere
11.6
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
63.3
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 63.3
Samples: 152
Max nTPM: 174.8
Min nTPM: 26.2
Std nTPM: 20.1
Median nTPM: 60.2
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
174.8
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
154.1
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
135.5
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
113.2
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
111.2
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
109.3
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
107.6
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
99.3
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
93.3
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
91.6
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
88.4
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
86.9
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
84.6
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
84.4
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
80.9
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
80.7
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
80.1
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
78.9
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
78.9
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
78.2
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
78.0
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
77.6
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
76.5
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
76.5
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
76.4
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
76.0
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
75.7
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
73.9
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
73.5
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
73.2
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
72.8
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
72.6
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
72.3
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
71.9
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
71.5
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
70.9
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
70.5
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
70.3
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
70.3
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
69.5
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
69.5
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
69.4
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
69.4
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
69.2
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
69.2
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
69.2
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
68.8
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
68.6
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
68.3
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
67.9
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
67.8
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
67.2
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
67.1
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
67.1
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
65.9
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
65.7
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
65.7
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
65.4
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
64.2
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
63.8
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
63.6
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
63.1
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
62.7
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
62.6
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
62.5
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
62.0
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
62.0
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
61.9
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
61.7
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
61.5
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
61.2
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
61.2
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
61.0
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
60.8
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
60.5
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
60.3
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
60.1
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
60.1
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
59.8
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
59.8
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
59.8
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
59.6
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
59.0
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
58.8
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
58.8
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
58.5
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
58.3
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
58.1
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
57.9
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
57.6
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
57.6
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
57.5
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
57.2
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
56.4
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
56.3
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
56.2
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
56.2
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
56.0
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
55.9
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
55.7
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
55.6
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
55.5
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
55.1
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
54.5
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
54.4
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
54.2
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
54.2
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
53.6
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
53.3
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
53.3
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
53.0
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
52.7
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
51.9
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
51.7
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
51.3
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
51.3
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
50.8
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
50.3
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
49.6
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
49.6
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
49.3
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
49.2
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
49.0
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
48.0
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
47.6
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
47.1
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
46.5
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
46.3
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
46.2
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
45.8
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
45.5
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
45.3
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
45.2
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
45.2
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
45.2
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
44.5
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
43.3
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
43.1
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
42.9
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
42.3
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
41.7
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
40.8
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
40.2
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
40.1
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
39.6
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
38.6
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
37.2
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
36.8
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
35.5
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
34.1
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
33.4
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
26.2
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
59.1
Mouse sample
Sample description
nTPM
Amygdala nTPM: 59.1
Samples: 4
Max nTPM: 62.2
Min nTPM: 56.4
Sample A
Male
57.8
Sample B
Male
62.2
Sample C
Female
56.4
Sample D
Female
60.1
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.