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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
68.6
nTPM
HPA Brain:
79.6
nTPM
GTEx:
68.6
nTPM
FANTOM5:
27.2
Scaled Tags Per Million
Pig:
189.8
nTPM
Mouse:
388.0
nTPM
Allen mouse:
14.7
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
79.6
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 67.2
2411
Female, age 72, unknown
85.4
2019
Male, age 18, unknown
81.5
1827
Male, age 72, unknown
78.9
2219
Male, age 76, both hemispheres
70.9
2666
Male, age 74, left hemisphere
69.5
1870
Female, age 42, unknown
66.3
1833
Male, age 53, unknown
59.5
2828
Female, age 72, unknown
54.7
1830
Male, age 51, unknown
54.5
2586
Male, age 75, left hemisphere
51.5
Dorsal raphe nucleus nTPM: 68.5
2298
Female, age 72, unknown
89.1
1828
Male, age 53, unknown
77.6
2047
Male, age 72, unknown
68.4
2750
Male, age 76, both hemispheres
58.1
2016
Female, age 72, unknown
49.3
Inferior colliculus nTPM: 79.6
2097
Female, age 72, unknown
97.2
1848
Female, age 42, unknown
78.7
1890
Male, age 53, unknown
78.7
2849
Male, age 72, unknown
63.8
Median raphe nucleus nTPM: 68.7
2220
Male, age 76, midline
68.7
Periaquaductal grey, anterior nTPM: 59.9
1947
Male, age 18, unknown
71.2
1795
Male, age 51, unknown
57.2
2502
Female, age 75, unknown
51.2
Periaquaductal grey, dorsal nTPM: 54.5
1840
Male, age 53, unknown
60.5
2850
Male, age 76, both hemispheres
52.7
1831
Male, age 72, unknown
52.5
2464
Female, age 72, unknown
52.1
Periaquaductal grey, lateral nTPM: 57.8
2272
Male, age 74, both hemispheres
74.2
2053
Male, age 18, unknown
50.3
2140
Male, age 76, both hemispheres
49.0
Pretectal area nTPM: 77.9
2007
Male, age 72, unknown
106.1
1817
Female, age 42, unknown
101.5
1816
Male, age 51, unknown
97.8
1944
Female, age 72, unknown
97.3
2667
Female, age 75, unknown
86.4
1815
Male, age 53, unknown
74.2
2224
Female, age 72, unknown
68.0
2273
Male, age 74, both hemispheres
65.3
2825
Male, age 18, unknown
57.9
2316
Male, age 76, right hemisphere
53.4
2407
Male, age 75, both hemispheres
49.1
Red nucleus nTPM: 63.0
1821
Female, age 72, unknown
90.9
2785
Male, age 18, unknown
78.4
2725
Female, age 75, unknown
73.9
1954
Female, age 42, unknown
66.3
2823
Male, age 76, right hemisphere
60.1
2769
Male, age 72, unknown
59.4
2503
Female, age 72, unknown
58.6
1865
Male, age 51, unknown
58.3
2227
Male, age 72, unknown
57.7
2588
Male, age 74, left hemisphere
54.3
1904
Male, age 53, unknown
53.5
2584
Male, age 75, left hemisphere
44.6
Substantia nigra nTPM: 79.0
1941
Male, age 53, unknown
111.1
1916
Female, age 42, unknown
104.8
1889
Female, age 72, unknown
101.9
2409
Female, age 72, unknown
88.6
2241
Male, age 72, unknown
86.8
1851
Male, age 51, unknown
79.4
2665
Male, age 74, both hemispheres
56.2
2583
Male, age 75, right hemisphere
54.4
2590
Female, age 75, unknown
53.7
2699
Male, age 18, unknown
53.3
Superior colliculus nTPM: 63.9
1895
Male, age 76, right hemisphere
86.5
2087
Female, age 72, unknown
85.0
2668
Female, age 75, unknown
74.0
2261
Male, age 18, unknown
69.2
1796
Male, age 53, unknown
67.4
1839
Male, age 51, unknown
66.3
2587
Male, age 74, left hemisphere
60.4
1913
Female, age 42, unknown
46.2
1995
Male, age 72, unknown
45.2
2664
Male, age 75, both hemispheres
38.7
Ventral tegmental area nTPM: 69.5
2410
Female, age 72, unknown
91.8
2218
Male, age 76, both hemispheres
85.1
1915
Female, age 42, unknown
82.0
1942
Male, age 51, unknown
61.8
2223
Female, age 72, unknown
53.8
2021
Male, age 53, unknown
42.7
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
68.6
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 68.6
Samples: 139
Max nTPM: 395.0
Min nTPM: 18.1
Std nTPM: 55.1
Median nTPM: 46.4
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
395.0
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
294.5
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
215.1
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
182.2
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
180.2
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
178.2
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
177.5
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
174.2
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
162.5
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
157.9
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
147.6
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
141.4
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
136.6
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
132.7
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
130.1
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
128.4
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
126.4
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
126.2
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
125.3
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
124.7
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
123.1
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
121.7
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
118.4
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
115.1
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
113.9
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
113.5
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
112.6
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
110.7
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
108.4
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
103.4
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
103.0
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
101.0
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
95.6
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
91.0
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
88.7
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
83.5
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
81.9
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
81.6
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
79.7
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
79.5
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
79.3
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
78.8
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
76.9
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
75.5
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
72.6
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
72.0
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
71.7
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
71.1
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
71.0
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
70.7
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
68.1
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
67.5
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
67.4
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
65.7
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
64.9
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
60.1
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
59.0
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
58.4
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
57.0
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
56.4
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
53.6
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
53.5
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
53.2
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
53.0
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
49.5
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
48.3
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
48.1
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
47.7
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
47.6
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
46.4
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
45.8
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
44.5
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
43.9
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
42.8
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
42.5
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
42.4
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
41.9
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
41.7
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
40.7
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
40.7
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
40.2
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
39.9
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
39.7
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
39.2
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
38.6
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
37.8
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
36.9
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
36.6
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
36.2
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
35.9
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
35.7
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
35.1
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
34.3
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
33.9
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
33.8
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
33.5
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
33.4
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
33.0
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
32.9
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
32.7
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
32.1
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
32.0
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
31.5
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
31.0
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
30.8
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
30.3
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
30.2
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
30.1
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
30.1
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
30.1
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
30.0
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
29.9
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
29.8
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
29.5
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
29.4
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
29.3
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
28.9
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
28.9
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
28.6
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
28.5
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
28.3
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
27.9
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
27.5
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
27.0
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
26.6
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
26.5
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
25.8
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
25.1
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
24.9
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
24.6
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
24.2
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
24.0
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
23.5
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
23.4
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
22.2
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
20.9
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
20.8
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
19.0
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
18.1
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
388.0
Mouse sample
Sample description
nTPM
Midbrain nTPM: 388.1
Samples: 4
Max nTPM: 397.3
Min nTPM: 380.9
Sample A
Male
383.8
Sample B
Male
397.3
Sample C
Female
390.3
Sample D
Female
380.9
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.