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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
65.0
nTPM
HPA Brain:
67.9
nTPM
GTEx:
65.0
nTPM
FANTOM5:
51.0
Scaled Tags Per Million
Pig:
83.3
nTPM
Mouse:
303.6
nTPM
Allen mouse:
18.6
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
67.9
Sample id
Sample description
nTPM
Amygdala nTPM: 67.9
2814
Male, age 76, right hemisphere
112.5
1987
Female, age 91, left hemisphere
70.8
2514
Male, age 75, right hemisphere
57.2
2517
Female, age 94, left hemisphere
53.6
2695
Female, age 67, right hemisphere
45.4
Basal amygdala nTPM: 61.5
2243
Female, age 91, right hemisphere
81.1
1955
Male, age 76, both hemispheres
73.2
2110
Male, age 80, left hemisphere
65.9
2685
Female, age 94, left hemisphere
59.9
2609
Male, age 75, right hemisphere
58.0
2827
Female, age 67, right hemisphere
30.9
Central amygdala nTPM: 64.5
1905
Male, age 76, both hemispheres
105.4
2239
Male, age 80, left hemisphere
65.2
2701
Female, age 91, right hemisphere
54.1
2515
Male, age 75, right hemisphere
49.6
2826
Female, age 94, left hemisphere
48.3
Corticomedial amygdala nTPM: 62.6
2829
Male, age 80, left hemisphere
77.8
2240
Male, age 76, both hemispheres
73.2
2242
Female, age 91, right hemisphere
68.9
2429
Female, age 94, left hemisphere
65.3
2428
Male, age 75, right hemisphere
51.6
2535
Female, age 67, right hemisphere
38.9
Lateral amygdala nTPM: 58.8
1883
Male, age 76, both hemispheres
111.9
2534
Female, age 94, left hemisphere
69.1
2516
Male, age 75, right hemisphere
60.0
2255
Female, age 91, right hemisphere
46.9
2256
Male, age 80, left hemisphere
34.5
2830
Female, age 67, right hemisphere
30.6
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
65.0
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 65.0
Samples: 152
Max nTPM: 173.1
Min nTPM: 20.4
Std nTPM: 30.6
Median nTPM: 60.2
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
173.1
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
158.8
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
144.9
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
128.9
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
123.9
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
119.5
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
118.7
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
117.9
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
115.8
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
114.2
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
114.1
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
112.4
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
112.3
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
111.4
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
111.0
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
110.7
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
109.1
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
105.2
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
104.6
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
103.9
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
103.0
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
101.5
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
99.0
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
98.7
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
95.1
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
94.9
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
94.8
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
94.0
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
93.7
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
93.6
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
93.3
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
90.5
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
90.0
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
89.6
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
87.9
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
87.8
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
87.4
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
86.2
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
85.8
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
85.5
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
84.8
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
83.8
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
83.6
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
83.0
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
82.9
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
80.6
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
80.2
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
79.9
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
79.5
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
79.2
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
77.7
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
77.6
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
76.8
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
74.6
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
74.4
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
73.2
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
72.5
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
70.9
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
67.7
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
66.8
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
66.4
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
66.2
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
65.8
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
64.7
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
64.7
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
64.5
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
64.4
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
64.3
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
64.1
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
63.0
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
62.4
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
62.0
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
61.5
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
61.2
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
60.9
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
60.6
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
59.8
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
57.9
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
57.9
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
56.9
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
56.5
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
55.7
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
54.3
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
54.2
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
53.6
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
53.1
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
52.7
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
52.7
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
51.5
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
50.7
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
49.6
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
49.5
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
49.0
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
48.4
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
48.2
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
47.0
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
46.9
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
46.8
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
46.8
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
46.4
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
46.2
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
44.9
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
44.6
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
44.5
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
44.4
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
44.0
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
43.7
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
43.6
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
43.3
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
42.6
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
42.2
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
41.6
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
41.4
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
40.1
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
39.8
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
39.5
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
39.4
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
38.2
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
38.0
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
37.4
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
36.9
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
36.5
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
36.5
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
36.2
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
35.8
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
35.7
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
35.5
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
35.5
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
35.2
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
33.7
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
32.7
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
32.4
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
32.4
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
31.9
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
31.3
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
31.0
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
30.9
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
30.6
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
30.2
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
30.1
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
29.0
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
28.6
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
27.0
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
26.9
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
26.4
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
26.1
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
23.8
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
22.0
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
22.0
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
21.0
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
20.9
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
20.4
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
303.6
Mouse sample
Sample description
nTPM
Amygdala nTPM: 303.6
Samples: 4
Max nTPM: 323.8
Min nTPM: 292.1
Sample A
Male
323.8
Sample B
Male
303.3
Sample C
Female
292.1
Sample D
Female
295.0
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.