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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
EPCAM is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
143.1
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
474.9
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
380.8
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
295.4
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
291.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
280.5
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
260.3
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
255.8
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
249.4
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
238.3
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
221.2
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
214.3
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
210.6
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
205.8
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
205.4
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
202.4
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
200.6
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
200.5
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
197.6
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
190.5
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
175.2
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
174.0
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
171.4
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
160.1
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
156.1
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
154.3
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
141.1
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
139.7
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
134.8
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
134.2
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
129.4
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
126.9
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
126.2
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
125.2
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
123.7
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
123.7
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
123.2
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
118.8
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
116.5
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
115.5
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
114.8
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
114.2
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
106.0
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
89.7
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
88.3
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
85.5
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
82.7
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
82.5
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
81.9
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
80.4
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
79.9
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
73.9
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
73.3
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
73.1
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
71.9
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
57.7
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
57.5
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
54.1
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
47.6
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
46.9
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
39.6
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
7.4
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
3.6
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
0.5
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
EPCAM is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
37.1
Number of samples
521
Samples
Sample
Description
TPM
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
356.4
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
332.4
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
284.0
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
224.3
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
221.1
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
220.3
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
220.2
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
218.6
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
202.1
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
192.7
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
190.9
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
170.9
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
161.8
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
153.6
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
152.8
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
146.7
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
145.0
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
144.2
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
133.5
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
126.6
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
123.0
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
121.3
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
116.7
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
115.8
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
112.4
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
109.7
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
109.0
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
97.0
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
95.7
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
88.9
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
88.8
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
88.7
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
87.3
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
83.7
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
83.2
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
81.3
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
79.7
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
76.2
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
74.2
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
74.0
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
74.0
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
73.7
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
73.3
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
73.3
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
72.5
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
71.5
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
71.1
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
70.9
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
70.8
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
70.4
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
70.1
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
70.0
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
70.0
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
69.3
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
67.4
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
67.1
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
66.3
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
65.9
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
65.5
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
65.4
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
65.1
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
64.8
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
64.5
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
64.3
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
64.0
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
62.9
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
62.7
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
62.4
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
61.8
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
61.6
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
61.5
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
61.4
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
60.8
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
60.5
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
60.2
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
60.0
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
60.0
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
59.9
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
59.3
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
59.1
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
58.7
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
58.6
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
58.6
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
58.3
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
57.9
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
57.3
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
57.0
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
56.8
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
55.7
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
54.6
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
54.6
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
54.2
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
54.0
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
53.7
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
53.2
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
52.9
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
52.5
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
52.3
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
51.7
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
51.7
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
51.6
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
51.4
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
51.1
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
50.5
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
50.3
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
50.3
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
50.0
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
50.0
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
49.7
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
49.6
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
49.5
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
49.1
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
48.7
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
48.4
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
48.3
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
48.2
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
48.1
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
47.6
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
47.6
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
47.4
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
46.6
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
46.4
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
46.4
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
46.2
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
46.2
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
46.1
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
46.0
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
45.7
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
45.7
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
45.4
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
45.3
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
44.9
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
44.7
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
44.4
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
44.4
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
44.3
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
43.9
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
43.9
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
43.4
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
43.4
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
42.7
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
42.5
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
42.5
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
42.4
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
42.2
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
42.2
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
42.2
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
41.6
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
41.6
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
41.5
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
41.2
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
41.0
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
41.0
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
41.0
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
41.0
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
40.5
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
40.4
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
40.2
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
39.8
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
39.8
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
39.5
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
39.3
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
39.2
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
39.2
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
39.2
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
39.0
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
39.0
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
38.9
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
38.9
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
38.7
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
38.5
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
38.4
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
38.3
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
38.2
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
38.1
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
38.0
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
37.9
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
37.9
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
37.9
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
37.8
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
37.7
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
37.7
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
37.0
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
36.4
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
36.2
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
36.1
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
36.0
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
35.7
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
35.5
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
35.5
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
35.0
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
34.9
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
34.9
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
34.7
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
34.2
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
34.2
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
34.1
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
34.0
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
34.0
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
34.0
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
33.9
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
33.6
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
33.5
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
33.5
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
33.4
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
33.2
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
33.2
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
33.0
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
32.9
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
32.8
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
32.6
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
32.2
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
32.2
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
32.1
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
32.1
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
31.9
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
31.8
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
31.6
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
31.4
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
31.3
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
31.3
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
31.2
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
31.1
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
31.1
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
31.0
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
30.8
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
30.7
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
30.7
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
30.7
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
30.6
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
30.5
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
30.4
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
30.3
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
30.1
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
30.1
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
30.0
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
30.0
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
29.8
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
29.7
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
29.7
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
29.6
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
29.3
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
29.2
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
29.1
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
29.1
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
29.0
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
29.0
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
28.9
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
28.9
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
28.7
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
28.4
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
28.3
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
28.2
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
28.1
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
27.9
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
27.9
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
27.7
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
27.7
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
27.7
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
27.7
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
27.6
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
27.4
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
27.3
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
27.3
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
27.1
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
26.7
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
26.4
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
26.4
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
26.0
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
25.5
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
25.5
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
25.3
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
25.2
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
24.9
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
24.8
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
24.7
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
24.7
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
24.6
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
24.5
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
24.4
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
24.3
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
24.3
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
24.2
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
24.1
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
24.1
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
23.9
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
23.8
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
23.7
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
23.6
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
23.5
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
23.4
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
23.4
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
23.4
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
23.4
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
23.3
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
23.3
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
23.2
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
23.1
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
23.1
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
23.0
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
23.0
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
23.0
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
22.9
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
22.8
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
22.7
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
22.6
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
22.5
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
22.3
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
22.3
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
22.3
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
22.1
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
22.0
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
22.0
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
22.0
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
22.0
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
21.6
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
21.6
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
21.3
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
21.2
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
21.2
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
21.1
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
21.1
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
21.1
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
21.0
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
20.8
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
20.8
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
20.6
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
20.5
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
20.4
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
20.4
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
20.3
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
20.3
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
20.2
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
20.1
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
20.0
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
19.9
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
19.9
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
19.8
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
19.7
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
19.7
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
19.7
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
19.6
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
19.6
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
19.5
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
19.4
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
19.3
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
19.3
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
19.2
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
19.2
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
19.2
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
19.1
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
19.0
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
18.9
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
18.9
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
18.8
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
18.8
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
18.7
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
18.6
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
18.6
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
18.5
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
18.5
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
18.2
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
18.1
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
17.7
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
17.6
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
17.6
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
17.6
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
17.5
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
17.4
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
17.3
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
17.2
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
17.1
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
17.0
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
16.9
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
16.7
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
16.6
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
16.5
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
16.5
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
16.4
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
16.0
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
15.9
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
15.8
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
15.7
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
15.6
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
15.6
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
15.4
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
15.4
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
15.3
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
15.1
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
15.0
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
14.7
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
14.6
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
14.5
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
14.3
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
14.1
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
14.1
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
14.0
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
14.0
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
13.8
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
13.7
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
13.5
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
13.3
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
13.2
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
13.2
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
13.2
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
13.1
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
12.9
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
12.7
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
12.7
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
12.4
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
12.3
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
12.3
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
12.2
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
11.9
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
11.7
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
11.7
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
11.7
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
11.6
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
11.5
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
11.4
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
11.4
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
11.2
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
11.1
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
11.1
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
11.1
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
10.8
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
10.8
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
10.6
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
10.5
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
10.4
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
10.4
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
10.3
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
10.2
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
10.1
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
10.0
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
9.9
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
9.4
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
9.1
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
9.1
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
9.1
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
9.1
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
9.0
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
8.9
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
8.9
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
8.9
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
8.5
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
8.4
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
8.4
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
8.3
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
8.2
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
8.1
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
8.0
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
7.9
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
7.7
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
7.5
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
7.4
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
7.3
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
7.3
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
6.9
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
6.7
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
6.6
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
6.6
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
6.4
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
6.3
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
6.0
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
5.6
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
5.4
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
5.2
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
5.2
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
5.0
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
4.8
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
4.7
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
4.6
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
4.4
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
4.4
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
4.4
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
4.3
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
4.3
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
4.2
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
4.1
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
4.0
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
3.8
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
3.7
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
3.4
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
3.3
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
3.3
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
3.3
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
3.1
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
3.1
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
3.1
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
3.0
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
3.0
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
3.0
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
2.9
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
2.9
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
2.7
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
2.7
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
2.6
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
2.6
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
2.4
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
2.4
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
2.3
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
2.0
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
1.8
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
1.7
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
1.7
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
1.4
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
1.3
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
1.2
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
1.0
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
0.9
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
0.7
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
0.6
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
0.5
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
0.5
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
0.4
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
0.3
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
0.3
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
0.3
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
0.2
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
EPCAM is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
55.4
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
257.0
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
198.0
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
177.1
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
158.3
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
156.8
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
149.5
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
126.8
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
117.1
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
114.3
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
112.7
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
104.0
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
102.1
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
98.2
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
98.0
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
97.7
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
92.3
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
89.2
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
84.3
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
83.6
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
82.4
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
79.7
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
77.7
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
77.6
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
75.9
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
74.8
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
72.2
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
71.2
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
69.9
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
68.9
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
68.4
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
67.6
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
65.8
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
65.3
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
64.7
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
64.4
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
62.7
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
61.6
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
61.5
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
61.2
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
61.1
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
56.8
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
56.7
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
55.5
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
54.2
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
54.1
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
52.5
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
51.8
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
51.3
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
51.3
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
50.5
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
49.6
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
49.1
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
48.3
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
47.2
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
46.3
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
43.8
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
43.6
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
42.6
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
36.9
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
34.9
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
34.2
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
33.2
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
33.1
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
30.5
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
29.4
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
29.3
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
29.1
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
29.0
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
27.9
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
24.1
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
22.5
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
22.3
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
22.0
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
20.9
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
20.7
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
19.4
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
17.9
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
16.9
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
16.6
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
16.2
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
15.9
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
15.3
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
15.2
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
15.0
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
14.7
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
14.1
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
14.0
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
13.9
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
13.0
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
12.7
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
12.0
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
9.4
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
8.6
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
7.4
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
6.9
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
4.4
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
4.1
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
1.0
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
EPCAM is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
104.5
Number of samples
282
Samples
Sample
Description
TPM
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
478.5
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
468.7
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
378.4
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
370.9
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
366.1
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
352.7
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
351.0
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
321.1
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
301.5
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
274.6
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
267.4
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
265.9
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
264.8
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
262.5
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
261.9
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
255.4
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
245.0
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
240.8
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
239.7
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
238.6
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
236.1
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
229.4
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
221.8
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
220.9
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
218.9
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
217.2
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
212.1
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
208.4
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
202.6
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
201.9
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
199.5
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
199.4
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
190.5
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
189.8
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
183.7
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
180.7
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
180.6
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
179.2
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
178.1
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
175.3
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
173.6
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
172.8
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
172.3
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
171.9
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
166.8
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
164.8
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
160.8
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
160.1
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
158.5
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
158.1
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
157.6
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
157.6
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
156.2
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
155.8
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
155.8
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
155.4
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
154.7
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
152.8
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
152.6
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
152.0
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
151.1
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
150.7
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
149.6
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
149.1
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
148.3
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
147.6
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
145.2
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
144.3
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
139.6
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
138.7
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
138.3
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
138.3
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
136.5
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
135.7
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
135.4
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
134.8
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
133.9
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
133.8
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
133.2
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
133.1
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
132.4
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
131.6
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
130.6
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
130.6
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
130.4
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
130.1
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
128.7
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
128.2
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
127.6
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
127.5
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
127.4
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
127.0
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
125.3
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
124.3
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
121.1
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
119.3
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
118.8
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
117.7
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
116.0
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
115.0
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
114.9
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
114.7
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
114.2
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
113.2
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
112.4
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
112.2
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
110.4
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
110.3
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
110.2
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
109.0
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
108.8
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
108.7
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
108.1
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
107.7
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
107.5
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
107.4
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
106.4
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
104.4
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
104.0
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
103.5
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
102.6
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
101.6
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
101.3
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
100.6
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
99.9
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
98.3
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
97.8
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
97.8
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
97.5
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
95.8
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
95.8
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
94.1
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
93.4
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
92.3
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
90.7
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
90.5
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
90.0
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
90.0
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
89.9
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
89.8
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
89.6
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
88.4
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
88.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
87.7
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
86.8
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
84.7
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
84.3
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
84.1
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
83.2
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
83.0
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
82.3
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
80.8
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
80.6
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
80.5
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
77.2
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
76.1
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
76.1
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
75.7
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
74.8
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
74.7
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
74.7
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
73.8
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
73.8
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
73.3
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
73.1
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
73.0
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
72.7
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
72.5
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
71.7
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
71.7
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
71.1
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
70.7
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
70.7
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
70.1
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
69.7
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
69.5
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
68.5
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
68.4
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
67.9
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
67.8
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
67.7
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
67.7
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
67.4
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
67.4
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
67.1
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
66.5
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
66.5
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
66.2
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
64.8
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
64.7
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
64.7
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
64.2
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
63.8
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
63.2
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
60.7
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
60.5
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
59.3
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
57.2
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
57.0
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
56.5
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
55.7
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
55.0
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
54.7
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
52.2
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
49.9
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
49.8
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
49.6
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
49.4
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
47.5
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
47.2
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
46.5
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
46.1
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
45.8
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
45.6
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
45.4
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
45.3
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
44.7
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
43.3
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
41.1
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
40.8
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
40.0
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
38.4
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
38.2
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
36.6
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
36.4
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
36.3
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
35.6
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
35.6
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
35.1
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
34.9
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
34.7
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
34.2
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
34.0
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
32.4
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
32.2
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
31.2
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
30.2
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
29.6
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
29.2
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
28.9
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
28.7
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
28.7
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
28.3
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
27.9
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
27.9
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
26.3
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
24.5
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
23.8
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
23.8
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
23.3
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
22.6
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
22.4
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
22.1
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
20.9
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
20.4
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
20.3
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
19.6
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
17.4
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
16.6
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
16.5
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
15.8
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
15.6
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
14.0
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
13.9
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
12.7
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
12.3
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
12.3
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
11.8
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
10.9
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
10.1
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
8.0
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
7.4
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
6.6
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
4.9
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
4.6
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
2.1
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
1.9
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
1.5
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
1.4
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
0.0
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
0.0
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0012640003
Normal
1.3
CPT0001230001
Normal
1.2
CPT0069190001
Normal
1.2
CPT0025920001
Normal
1.2
CPT0078660003
Tumor
1.2
CPT0069010001
Normal
1.1
CPT0079180003
Tumor
1.1
CPT0001510001
Normal
1.0
CPT0001350001
Normal
0.9
CPT0088640003
Normal
0.9
CPT0092310003
Normal
0.8
CPT0077140001
Normal
0.8
CPT0079300001
Normal
0.8
CPT0006730001
Normal
0.8
CPT0001190001
Normal
0.8
CPT0088710001
Normal
0.8
CPT0087050003
Normal
0.8
CPT0014130001
Normal
0.8
CPT0089480003
Normal
0.7
CPT0088500001
Normal
0.7
CPT0086830003
Normal
0.7
CPT0026420001
Normal
0.7
CPT0001550001
Normal
0.7
CPT0063640001
Normal
0.7
CPT0078670001
Normal
0.7
CPT0079510001
Normal
0.7
CPT0017450001
Normal
0.7
CPT0000660001
Normal
0.7
CPT0079430001
Normal
0.6
CPT0012770003
Normal
0.6
CPT0020130001
Normal
0.6
CPT0000790001
Normal
0.6
CPT0010170001
Normal
0.6
CPT0063330001
Normal
0.6
CPT0065450001
Normal
0.6
CPT0012290003
Normal
0.6
CPT0077500001
Normal
0.6
CPT0009020003
Normal
0.6
CPT0007470001
Normal
0.6
CPT0078940001
Normal
0.6
CPT0075170001
Normal
0.6
CPT0065820001
Normal
0.6
CPT0088920001
Normal
0.6
CPT0066520001
Normal
0.6
CPT0007870001
Normal
0.6
CPT0088570001
Normal
0.5
CPT0023360001
Normal
0.5
CPT0086370003
Normal
0.5
CPT0079000001
Normal
0.5
CPT0081620001
Normal
0.5
CPT0023710001
Normal
0.5
CPT0078840001
Normal
0.5
CPT0006530001
Normal
0.5
CPT0078530001
Normal
0.5
CPT0076350001
Normal
0.5
CPT0082010001
Normal
0.5
CPT0077320001
Normal
0.5
CPT0006950001
Normal
0.5
CPT0088780001
Normal
0.4
CPT0092740003
Normal
0.4
CPT0089040001
Normal
0.4
CPT0064400001
Normal
0.4
CPT0012090003
Normal
0.4
CPT0020020001
Normal
0.4
CPT0009080003
Normal
0.4
CPT0014350001
Normal
0.4
CPT0025610001
Normal
0.4
CPT0000890001
Normal
0.4
CPT0066430001
Normal
0.4
CPT0013790003
Normal
0.4
CPT0025060001
Normal
0.4
CPT0019160001
Normal
0.4
CPT0086970003
Normal
0.3
CPT0018250001
Normal
0.3
CPT0086890003
Normal
0.3
CPT0012920003
Normal
0.3
CPT0012570003
Normal
0.3
CPT0092800003
Normal
0.3
CPT0088480003
Tumor
0.3
CPT0075570001
Normal
0.2
CPT0002370001
Normal
0.2
CPT0010120001
Normal
0.1
CPT0084590001
Normal
0.1
CPT0087040003
Tumor
0.1
CPT0001270001
Normal
0.1
CPT0024680001
Normal
0.0
CPT0065430003
Tumor
-0.1
CPT0006900003
Tumor
-0.1
CPT0088690003
Tumor
-0.1
CPT0014470001
Normal
-0.1
CPT0089020003
Tumor
-0.1
CPT0019130003
Tumor
-0.2
CPT0014160003
Tumor
-0.2
CPT0089460004
Tumor
-0.2
CPT0025580004
Tumor
-0.2
CPT0078800003
Tumor
-0.3
CPT0092190003
Normal
-0.3
CPT0010110003
Tumor
-0.3
CPT0001220008
Tumor
-0.4
CPT0077490003
Tumor
-0.4
CPT0017850003
Tumor
-0.4
CPT0014450004
Tumor
-0.4
CPT0086820003
Tumor
-0.4
CPT0075560003
Tumor
-0.4
CPT0001180009
Tumor
-0.4
CPT0001500009
Tumor
-0.5
CPT0007320003
Tumor
-0.5
CPT0023690003
Tumor
-0.5
CPT0078830003
Tumor
-0.5
CPT0078930003
Tumor
-0.5
CPT0064370003
Tumor
-0.5
CPT0078510003
Tumor
-0.6
CPT0012080003
Tumor
-0.6
CPT0079480003
Tumor
-0.7
CPT0078990003
Tumor
-0.8
CPT0092290003
Tumor
-0.8
CPT0025050003
Tumor
-0.8
CPT0069000003
Tumor
-0.8
CPT0012670003
Tumor
-0.8
CPT0086870003
Tumor
-0.9
CPT0092730003
Tumor
-0.9
CPT0075720003
Tumor
-0.9
CPT0063630003
Tumor
-0.9
CPT0024670003
Tumor
-0.9
CPT0063320003
Tumor
-1.0
CPT0014370004
Tumor
-1.0
CPT0009000003
Tumor
-1.0
CPT0066480003
Tumor
-1.0
CPT0084560003
Tumor
-1.0
CPT0065750003
Tumor
-1.0
CPT0000870016
Tumor
-1.0
CPT0077110003
Tumor
-1.0
CPT0071150004
Tumor
-1.0
CPT0021240003
Tumor
-1.0
CPT0019990003
Tumor
-1.0
CPT0012900004
Tumor
-1.0
CPT0086950003
Tumor
-1.0
CPT0092790003
Tumor
-1.1
CPT0006440003
Tumor
-1.1
CPT0000780007
Tumor
-1.1
CPT0002350011
Tumor
-1.1
CPT0088760003
Tumor
-1.1
CPT0081600003
Tumor
-1.2
CPT0077310003
Tumor
-1.2
CPT0012280003
Tumor
-1.2
CPT0026410003
Tumor
-1.2
CPT0020120003
Tumor
-1.2
CPT0088630003
Tumor
-1.2
CPT0092160003
Tumor
-1.2
CPT0066470004
Tumor
-1.2
CPT0076330003
Tumor
-1.2
CPT0007860003
Tumor
-1.3
CPT0069160003
Tumor
-1.3
CPT0065810003
Tumor
-1.3
CPT0025350003
Tumor
-1.3
CPT0006630003
Tumor
-1.3
CPT0088970003
Tumor
-1.3
CPT0012550003
Tumor
-1.3
CPT0086360003
Tumor
-1.4
CPT0012180003
Tumor
-1.4
CPT0079270003
Tumor
-1.5
CPT0010160003
Tumor
-1.5
CPT0012370003
Tumor
-1.5
CPT0015910003
Tumor
-1.5
CPT0025880003
Tumor
-1.5
CPT0025170003
Tumor
-1.6
CPT0017410003
Tumor
-1.6
CPT0009060003
Tumor
-1.6
CPT0079380003
Tumor
-1.6
CPT0011240003
Tumor
-1.6
CPT0075130003
Tumor
-1.7
CPT0065870003
Tumor
-1.8
CPT0000640003
Tumor
-1.8
CPT0065930003
Tumor
-1.8
CPT0081990003
Tumor
-1.9
CPT0001340003
Tumor
-1.9
CPT0025230003
Tumor
-1.9
CPT0088900003
Tumor
-2.0
CPT0001260009
Tumor
-2.0
CPT0001540009
Tumor
-2.1
CPT0023350003
Tumor
-2.1
CPT0085670003
Tumor
-2.2
CPT0025290003
Tumor
-2.2
CPT0002270011
Tumor
-2.2
CPT0011410003
Tumor
-2.2
CPT0086030003
Tumor
-2.2
CPT0088550004
Tumor
-2.3
CPT0015810003
Tumor
-2.4
CPT0079410003
Tumor
-2.5
CPT0015730003
Tumor
-2.7
CPT0025110003
Tumor
-2.7
CPT0065690003
Tumor
-2.7
CPT0079230003
Tumor
-2.7
CPT0081880003
Tumor
-2.9
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
