HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:56.7 nTPM
HPA Brain:97.0 nTPM
GTEx:56.7 nTPM
FANTOM5:98.0 Scaled Tags Per Million
Pig:168.8 nTPM
Mouse:107.4 nTPM
Allen mouse:14.9 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 97.0
Sample id Sample description nTPM
Hippocampus
nTPM: 81.2
1898 Male, age 80, left hemisphere 111.5
1855 Male, age 76, left hemisphere 84.9
2148 Female, age 91, left hemisphere 76.1
2621 Female, age 67, right hemisphere 74.4
1911 Female, age 85, right hemisphere 73.4
2529 Female, age 94, left hemisphere 66.6
Dentate gyrus
nTPM: 84.3
1927 Female, age 91, both hemispheres 106.9
2530 Female, age 94, left hemisphere 82.9
2010 Male, age 76, both hemispheres 82.2
2531 Female, age 67, both hemispheres 80.8
2246 Female, age 85, both hemispheres 77.3
2528 Male, age 74, both hemispheres 75.7
Entorhinal gyrus
nTPM: 85.7
1938 Female, age 85, left hemisphere 108.4
2613 Female, age 94, left hemisphere 98.0
2764 Male, age 80, right hemisphere 96.4
1787 Male, age 76, left hemisphere 80.1
2686 Male, age 75, right hemisphere 72.7
2117 Female, age 91, right hemisphere 58.4
Hippocampus, CA1
nTPM: 93.7
2749 Male, age 80, left hemisphere 141.3
1873 Female, age 85, both hemispheres 101.4
2045 Male, age 76, both hemispheres 96.0
2527 Male, age 74, both hemispheres 75.9
2082 Female, age 91, right hemisphere 54.0
Hippocampus, CA2
nTPM: 78.3
1963 Male, age 80, left hemisphere 105.9
1892 Male, age 76, both hemispheres 94.6
2437 Female, age 94, left hemisphere 78.7
2249 Male, age 74, both hemispheres 69.6
2113 Female, age 91, right hemisphere 60.8
1940 Female, age 85, left hemisphere 60.4
Hippocampus, CA3
nTPM: 89.3
2137 Male, age 80, left hemisphere 122.9
2620 Female, age 94, left hemisphere 107.9
2861 Female, age 67, both hemispheres 89.2
1867 Male, age 76, both hemispheres 78.2
1891 Female, age 85, both hemispheres 70.2
2436 Male, age 74, both hemispheres 67.5
Parahippocampal cortex
nTPM: 80.6
1850 Male, age 80, both hemispheres 97.5
1933 Female, age 85, both hemispheres 90.5
2245 Female, age 91, both hemispheres 86.3
2693 Female, age 94, both hemispheres 82.9
2532 Female, age 72, left hemisphere 82.6
1990 Female, age 91, right hemisphere 82.1
2622 Female, age 67, right hemisphere 74.5
2250 Female, age 67, right hemisphere 74.0
2018 Male, age 76, both hemispheres 69.3
2692 Male, age 74, both hemispheres 66.3
Perirhinal gyrus
nTPM: 97.0
1847 Female, age 91, left hemisphere 113.3
1794 Male, age 80, right hemisphere 102.2
1841 Female, age 85, right hemisphere 99.6
2848 Male, age 76, right hemisphere 92.1
2521 Female, age 94, right hemisphere 77.7
Subiculum
nTPM: 68.1
1977 Female, age 85, both hemispheres 85.2
1901 Male, age 80, both hemispheres 76.9
2619 Male, age 74, both hemispheres 65.2
2729 Female, age 91, right hemisphere 63.2
2042 Male, age 76, both hemispheres 61.1
2438 Female, age 94, left hemisphere 56.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 56.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 56.7
Samples: 197

Max nTPM: 142.5
Min nTPM: 15.3
Std nTPM: 24.5
Median nTPM: 53.0
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 142.5
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 125.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 117.6
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 112.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 109.2
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 108.6
GTEX-11GS4-0011-R1a-SM-DO129 60-69 years, male 107.0
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 106.4
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 105.8
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 103.6
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 102.5
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 98.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 98.0
FF:10169-103B7 60 years, female 124.6
FF:10153-102I9 76 years, female 71.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 168.8
Pig sample Sample description nTPM
Subiculum
nTPM: 100.1
Samples: 4

Max nTPM: 140.4
Min nTPM: 81.1
Sample A Female 140.4
Sample B Female 86.7
Sample C Male 92.0
Sample D Male 81.1
Dorsal hippocampus
nTPM: 168.8
Samples: 4

Max nTPM: 266.3
Min nTPM: 95.9
Sample A Female 266.3
Sample B Female 190.4
Sample C Male 95.9
Sample D Male 122.4
Entorhinal cortex
nTPM: 83.3
Samples: 4

Max nTPM: 90.9
Min nTPM: 71.7
Sample A Female 79.8
Sample B Female 90.9
Sample C Male 90.8
Sample D Male 71.7
Ventral hippocampus
nTPM: 158.8
Samples: 4

Max nTPM: 189.8
Min nTPM: 103.8
Sample A Female 168.8
Sample B Female 103.8
Sample C Male 189.8
Sample D Male 172.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 107.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 94.1
Samples: 4

Max nTPM: 100.0
Min nTPM: 79.4
Sample A Male 79.4
Sample B Male 99.0
Sample C Female 97.8
Sample D Female 100.0
Hippocampal formation
nTPM: 107.5
Samples: 4

Max nTPM: 118.2
Min nTPM: 103.0
Sample A Male 118.2
Sample B Male 104.4
Sample C Female 104.2
Sample D Female 103.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 14.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 14.9
71211578 Antisense, RP_050816_01_H02, Mouse strain C57BL/6J (56 days, male) 14.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org