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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
54.7
nTPM
HPA Brain:
64.9
nTPM
GTEx:
54.7
nTPM
FANTOM5:
78.7
Scaled Tags Per Million
Pig:
73.3
nTPM
Mouse:
108.8
nTPM
Allen mouse:
11.2
Expression energy
AMYGDALA - Annotated protein expression
Pending normal tissue analysis
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
64.9
Sample id
Sample description
nTPM
Amygdala nTPM: 58.7
1987
Female, age 91, left hemisphere
63.1
2695
Female, age 67, right hemisphere
63.1
2517
Female, age 94, left hemisphere
58.6
2514
Male, age 75, right hemisphere
57.1
2814
Male, age 76, right hemisphere
51.5
Basal amygdala nTPM: 60.9
2243
Female, age 91, right hemisphere
71.4
2685
Female, age 94, left hemisphere
70.1
2609
Male, age 75, right hemisphere
63.1
1955
Male, age 76, both hemispheres
55.9
2110
Male, age 80, left hemisphere
52.7
2827
Female, age 67, right hemisphere
51.9
Central amygdala nTPM: 64.9
2826
Female, age 94, left hemisphere
76.9
2239
Male, age 80, left hemisphere
70.0
2515
Male, age 75, right hemisphere
69.9
2701
Female, age 91, right hemisphere
58.5
1905
Male, age 76, both hemispheres
49.1
Corticomedial amygdala nTPM: 64.5
2829
Male, age 80, left hemisphere
75.5
2242
Female, age 91, right hemisphere
67.9
2428
Male, age 75, right hemisphere
64.7
2429
Female, age 94, left hemisphere
64.5
2535
Female, age 67, right hemisphere
57.7
2240
Male, age 76, both hemispheres
56.5
Lateral amygdala nTPM: 61.2
2534
Female, age 94, left hemisphere
75.3
1883
Male, age 76, both hemispheres
65.5
2255
Female, age 91, right hemisphere
61.0
2256
Male, age 80, left hemisphere
58.2
2516
Male, age 75, right hemisphere
57.7
2830
Female, age 67, right hemisphere
49.6
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
54.7
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 54.7
Samples: 152
Max nTPM: 146.5
Min nTPM: 17.9
Std nTPM: 19.6
Median nTPM: 51.2
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
146.5
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
112.5
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
111.4
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
104.6
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
96.6
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
96.4
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
96.2
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
95.3
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
87.3
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
86.5
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
85.2
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
83.8
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
82.8
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
82.1
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
79.2
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
79.1
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
77.9
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
77.9
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
75.9
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
75.9
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
75.8
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
75.1
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
74.3
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
74.3
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
73.1
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
72.9
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
72.3
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
71.9
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
70.9
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
70.2
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
69.1
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
68.2
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
67.0
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
66.5
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
65.3
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
65.2
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
64.8
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
63.9
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
63.0
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
62.8
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
62.5
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
62.4
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
62.2
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
61.2
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
61.0
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
60.8
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
60.8
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
59.9
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
59.4
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
59.3
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
59.3
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
59.0
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
58.8
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
58.7
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
58.4
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
58.3
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
58.2
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
57.4
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
56.8
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
56.4
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
56.4
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
55.0
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
54.6
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
54.3
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
54.2
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
54.1
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
54.0
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
53.9
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
53.8
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
53.7
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
53.6
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
53.4
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
53.3
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
52.4
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
52.4
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
51.8
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
50.6
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
50.4
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
49.6
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
49.5
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
49.2
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
48.9
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
48.4
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
48.1
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
48.0
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
48.0
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
47.8
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
47.8
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
47.7
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
47.6
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
47.4
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
47.1
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
46.9
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
46.9
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
46.9
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
46.8
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
46.7
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
46.3
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
45.8
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
45.7
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
45.5
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
45.2
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
44.9
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
44.3
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
43.7
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
43.6
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
43.5
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
43.3
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
42.6
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
42.5
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
42.4
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
42.2
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
42.1
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
42.0
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
42.0
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
41.9
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
41.3
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
41.2
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
41.1
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
40.7
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
40.2
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
40.2
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
40.1
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
40.1
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
40.0
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
38.8
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
38.4
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
37.8
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
37.7
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
37.0
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
35.8
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
35.1
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
35.1
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
33.8
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
33.6
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
33.0
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
32.9
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
32.2
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
31.3
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
30.5
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
30.4
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
30.1
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
29.5
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
28.9
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
28.9
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
28.1
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
27.9
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
27.9
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
27.9
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
23.1
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
18.3
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
17.9
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
108.8
Mouse sample
Sample description
nTPM
Amygdala nTPM: 108.8
Samples: 4
Max nTPM: 118.4
Min nTPM: 90.3
Sample A
Male
118.4
Sample B
Male
117.6
Sample C
Female
90.3
Sample D
Female
109.0
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
