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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
164.3
nTPM
HPA Brain:
63.1
nTPM
GTEx:
164.3
nTPM
FANTOM5:
57.2
Scaled Tags Per Million
Pig:
91.0
nTPM
MIDBRAIN - Annotated protein expression
Pending normal tissue analysis
MIDBRAIN - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
63.1
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 52.6
1870
Female, age 42, unknown
62.1
2666
Male, age 74, left hemisphere
61.9
1827
Male, age 72, unknown
61.1
2019
Male, age 18, unknown
59.9
2828
Female, age 72, unknown
59.5
2411
Female, age 72, unknown
49.9
2586
Male, age 75, left hemisphere
49.3
1833
Male, age 53, unknown
42.8
2219
Male, age 76, both hemispheres
41.6
1830
Male, age 51, unknown
38.0
Dorsal raphe nucleus nTPM: 63.1
2298
Female, age 72, unknown
86.0
2047
Male, age 72, unknown
64.8
1828
Male, age 53, unknown
59.7
2016
Female, age 72, unknown
56.6
2750
Male, age 76, both hemispheres
48.1
Inferior colliculus nTPM: 51.7
2097
Female, age 72, unknown
68.9
1890
Male, age 53, unknown
52.1
1848
Female, age 42, unknown
45.9
2849
Male, age 72, unknown
39.8
Median raphe nucleus nTPM: 51.8
2220
Male, age 76, midline
51.8
Periaquaductal grey, anterior nTPM: 53.5
1795
Male, age 51, unknown
59.1
1947
Male, age 18, unknown
52.7
2502
Female, age 75, unknown
48.8
Periaquaductal grey, dorsal nTPM: 48.6
2850
Male, age 76, both hemispheres
54.2
1840
Male, age 53, unknown
52.1
1831
Male, age 72, unknown
51.7
2464
Female, age 72, unknown
36.4
Periaquaductal grey, lateral nTPM: 47.6
2053
Male, age 18, unknown
51.0
2140
Male, age 76, both hemispheres
47.6
2272
Male, age 74, both hemispheres
44.3
Pretectal area nTPM: 59.1
1816
Male, age 51, unknown
70.9
1817
Female, age 42, unknown
69.5
1944
Female, age 72, unknown
68.5
2273
Male, age 74, both hemispheres
64.1
1815
Male, age 53, unknown
62.6
2007
Male, age 72, unknown
62.0
2316
Male, age 76, right hemisphere
58.0
2224
Female, age 72, unknown
57.3
2667
Female, age 75, unknown
55.6
2825
Male, age 18, unknown
44.9
2407
Male, age 75, both hemispheres
37.0
Red nucleus nTPM: 50.7
2503
Female, age 72, unknown
71.1
1821
Female, age 72, unknown
65.3
1904
Male, age 53, unknown
57.3
2823
Male, age 76, right hemisphere
55.9
2785
Male, age 18, unknown
54.7
1865
Male, age 51, unknown
52.7
1954
Female, age 42, unknown
47.9
2769
Male, age 72, unknown
45.7
2227
Male, age 72, unknown
44.7
2725
Female, age 75, unknown
43.6
2588
Male, age 74, left hemisphere
36.9
2584
Male, age 75, left hemisphere
32.2
Substantia nigra nTPM: 55.1
1916
Female, age 42, unknown
72.6
1851
Male, age 51, unknown
67.1
1889
Female, age 72, unknown
59.2
2583
Male, age 75, right hemisphere
54.3
2590
Female, age 75, unknown
54.3
2665
Male, age 74, both hemispheres
53.8
2699
Male, age 18, unknown
53.7
1941
Male, age 53, unknown
51.6
2241
Male, age 72, unknown
47.9
2409
Female, age 72, unknown
36.5
Superior colliculus nTPM: 59.7
2668
Female, age 75, unknown
76.4
1995
Male, age 72, unknown
71.9
2587
Male, age 74, left hemisphere
69.1
1913
Female, age 42, unknown
60.7
1796
Male, age 53, unknown
60.5
2261
Male, age 18, unknown
57.1
2087
Female, age 72, unknown
55.8
1895
Male, age 76, right hemisphere
53.4
2664
Male, age 75, both hemispheres
46.9
1839
Male, age 51, unknown
44.9
Ventral tegmental area nTPM: 55.7
1915
Female, age 42, unknown
66.8
2218
Male, age 76, both hemispheres
56.9
1942
Male, age 51, unknown
55.7
2410
Female, age 72, unknown
51.9
2223
Female, age 72, unknown
51.6
2021
Male, age 53, unknown
51.2
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
164.3
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 164.3
Samples: 139
Max nTPM: 419.6
Min nTPM: 57.2
Std nTPM: 53.5
Median nTPM: 151.1
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
419.6
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
365.2
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
327.5
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
309.4
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
305.3
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
272.6
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
254.2
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
249.5
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
247.8
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
245.8
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
245.2
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
243.9
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
242.5
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
242.3
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
227.0
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
226.3
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
224.9
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
221.4
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
211.7
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
210.7
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
210.0
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
209.5
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
208.2
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
208.1
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
207.5
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
200.3
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
199.0
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
198.6
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
196.3
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
191.6
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
191.5
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
191.4
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
188.6
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
185.5
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
184.8
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
184.6
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
184.3
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
183.4
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
181.6
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
180.8
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
180.7
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
179.9
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
177.2
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
176.4
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
175.5
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
175.5
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
174.0
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
173.3
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
171.2
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
167.5
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
163.9
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
163.9
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
163.5
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
163.3
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
161.5
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
161.3
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
159.8
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
158.2
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
158.1
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
157.7
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
157.7
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
156.8
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
154.7
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
154.1
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
152.1
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
151.9
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
151.5
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
151.3
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
151.3
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
151.1
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
150.9
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
149.9
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
149.6
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
148.3
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
148.1
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
148.0
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
147.9
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
145.9
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
145.5
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
145.3
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
145.3
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
145.0
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
143.3
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
143.1
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
142.6
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
142.1
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
141.8
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
141.8
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
141.3
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
138.2
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
138.1
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
138.0
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
137.9
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
137.8
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
137.3
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
136.1
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
135.8
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
135.6
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
135.4
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
135.1
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
134.8
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
132.2
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
132.0
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
131.5
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
131.3
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
131.1
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
130.6
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
129.7
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
129.3
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
127.7
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
127.4
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
124.7
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
124.3
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
124.1
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
123.8
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
122.2
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
121.3
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
121.0
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
118.9
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
118.0
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
117.4
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
117.0
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
116.3
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
114.7
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
113.7
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
108.7
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
107.8
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
106.4
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
105.3
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
102.1
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
101.8
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
101.2
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
101.2
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
100.8
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
100.5
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
98.4
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
93.8
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
92.0
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
57.2
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.