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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
159.0
nTPM
HPA Brain:
55.5
nTPM
GTEx:
159.0
nTPM
FANTOM5:
52.4
Scaled Tags Per Million
Pig:
78.2
nTPM
AMYGDALA - Annotated protein expression
Pending normal tissue analysis
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
55.5
Sample id
Sample description
nTPM
Amygdala nTPM: 55.5
2814
Male, age 76, right hemisphere
69.1
1987
Female, age 91, left hemisphere
59.0
2695
Female, age 67, right hemisphere
55.0
2514
Male, age 75, right hemisphere
53.3
2517
Female, age 94, left hemisphere
41.1
Basal amygdala nTPM: 46.8
2609
Male, age 75, right hemisphere
62.2
1955
Male, age 76, both hemispheres
59.0
2110
Male, age 80, left hemisphere
50.9
2685
Female, age 94, left hemisphere
43.6
2243
Female, age 91, right hemisphere
40.4
2827
Female, age 67, right hemisphere
24.8
Central amygdala nTPM: 50.2
1905
Male, age 76, both hemispheres
72.6
2826
Female, age 94, left hemisphere
67.4
2515
Male, age 75, right hemisphere
41.9
2239
Male, age 80, left hemisphere
37.5
2701
Female, age 91, right hemisphere
31.5
Corticomedial amygdala nTPM: 45.6
2428
Male, age 75, right hemisphere
53.1
2240
Male, age 76, both hemispheres
48.9
2429
Female, age 94, left hemisphere
46.7
2829
Male, age 80, left hemisphere
46.6
2242
Female, age 91, right hemisphere
45.3
2535
Female, age 67, right hemisphere
33.1
Lateral amygdala nTPM: 43.9
1883
Male, age 76, both hemispheres
64.4
2516
Male, age 75, right hemisphere
64.4
2534
Female, age 94, left hemisphere
43.1
2256
Male, age 80, left hemisphere
35.6
2830
Female, age 67, right hemisphere
32.9
2255
Female, age 91, right hemisphere
23.1
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
159.0
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 159.0
Samples: 152
Max nTPM: 433.8
Min nTPM: 62.5
Std nTPM: 66.8
Median nTPM: 144.7
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
433.8
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
421.0
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
411.3
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
407.4
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
389.9
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
367.6
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
290.9
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
274.1
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
253.7
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
252.4
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
251.3
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
246.3
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
242.9
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
241.5
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
228.1
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
226.7
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
221.7
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
220.0
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
218.7
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
215.1
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
213.9
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
208.0
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
201.7
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
200.2
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
198.7
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
196.1
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
195.7
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
194.5
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
193.9
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
191.9
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
191.4
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
190.0
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
189.7
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
189.7
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
187.9
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
187.5
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
186.9
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
186.0
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
183.9
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
181.4
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
180.4
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
179.3
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
177.9
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
177.2
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
172.4
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
170.9
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
169.9
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
169.2
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
168.8
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
167.3
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
165.1
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
165.0
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
164.8
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
164.5
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
163.4
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
162.8
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
161.5
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
159.3
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
158.6
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
157.0
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
155.0
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
153.3
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
153.1
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
152.6
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
151.8
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
151.5
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
149.6
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
149.4
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
149.3
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
148.8
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
148.6
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
147.6
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
147.6
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
145.7
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
145.0
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
144.9
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
144.5
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
144.4
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
144.4
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
143.5
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
143.4
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
143.4
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
143.1
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
142.3
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
142.1
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
140.2
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
139.9
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
138.5
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
138.1
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
136.2
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
135.0
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
133.8
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
133.4
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
132.9
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
132.7
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
132.7
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
132.7
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
132.3
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
132.2
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
131.8
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
128.7
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
128.7
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
128.3
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
126.7
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
125.4
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
125.4
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
125.4
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
124.2
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
123.7
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
121.5
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
119.8
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
117.8
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
116.3
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
115.1
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
113.8
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
113.7
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
113.3
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
113.0
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
112.9
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
112.8
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
111.5
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
109.9
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
108.9
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
106.4
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
105.4
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
105.1
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
105.0
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
104.2
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
103.9
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
103.4
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
101.8
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
100.8
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
100.6
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
99.3
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
99.3
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
98.4
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
98.1
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
96.3
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
94.5
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
94.5
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
94.4
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
93.0
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
92.4
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
90.2
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
87.3
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
83.7
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
83.1
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
78.9
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
73.9
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
67.8
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
63.7
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
62.5
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.