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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HSDL2 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
33.5
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
95.3
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
71.1
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
65.9
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
65.6
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
64.8
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
55.8
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
54.8
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
50.6
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
49.3
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
48.3
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
47.2
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
46.5
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
46.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
45.7
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
45.0
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
42.8
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
42.3
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
41.7
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
41.5
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
41.0
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
40.6
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
39.9
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
38.0
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
37.2
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
37.0
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
36.0
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
35.8
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
34.8
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
34.0
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
33.9
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
31.4
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
30.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
29.5
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
28.8
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
28.8
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
27.6
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
27.5
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
27.4
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
26.9
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
25.8
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
25.4
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
25.3
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
25.1
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
25.1
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
24.7
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
23.5
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
22.9
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
22.9
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
21.8
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
21.5
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
21.5
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
19.6
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
19.0
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
18.9
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
17.7
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
16.9
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
16.4
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
10.6
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
10.5
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
10.3
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
9.4
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
9.1
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
8.9
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HSDL2 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
32.4
Number of samples
521
Samples
Sample
Description
TPM
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
144.9
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
112.1
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
104.4
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
100.5
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
99.4
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
95.2
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
93.6
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
90.1
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
88.4
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
85.9
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
85.2
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
83.4
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
74.3
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
72.2
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
70.4
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
70.2
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
68.8
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
67.7
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
67.1
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
67.0
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
65.4
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
65.3
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
64.9
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
64.3
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
63.8
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
63.3
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
62.9
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
62.9
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
62.8
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
62.7
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
62.3
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
62.1
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
61.1
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
61.0
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
60.8
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
60.4
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
60.4
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
60.2
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
58.6
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
58.5
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
58.3
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
58.0
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
57.0
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
56.6
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
56.2
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
55.7
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
55.3
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
55.3
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
55.1
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
55.0
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
54.6
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
54.6
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
53.5
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
53.4
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
53.1
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
52.8
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
52.4
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
51.9
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
51.7
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
51.6
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
51.3
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
51.2
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
50.9
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
50.7
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
50.6
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
50.5
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
50.0
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
50.0
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
49.7
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
49.4
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
49.2
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
49.2
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
49.0
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
48.9
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
48.3
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
48.3
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
48.1
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
48.1
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
48.1
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
47.9
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
47.9
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
47.8
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
47.8
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
47.6
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
47.5
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
47.5
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
47.4
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
47.1
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
47.0
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
46.9
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
46.9
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
46.9
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
46.7
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
46.4
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
46.2
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
46.0
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
46.0
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
45.9
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
45.9
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
45.8
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
45.5
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
45.4
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
45.2
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
45.0
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
44.5
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
44.3
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
44.2
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
44.0
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
44.0
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
44.0
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
43.9
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
43.8
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
43.7
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
43.6
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
43.2
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
43.1
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
42.9
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
42.9
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
42.8
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
42.7
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
42.7
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
42.7
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
42.7
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
42.7
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
42.6
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
42.4
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
42.3
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
42.2
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
42.2
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
42.0
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
42.0
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
41.6
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
41.6
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
41.2
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
41.1
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
40.8
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
40.4
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
40.3
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
40.2
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
40.2
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
40.0
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
39.9
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
39.8
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
39.8
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
39.8
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
39.7
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
39.7
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
39.4
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
39.4
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
39.4
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
39.2
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
39.1
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
39.1
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
39.1
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
39.0
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
39.0
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
38.9
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
38.8
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
38.5
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
38.3
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
38.3
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
38.1
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
38.0
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
37.9
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
37.9
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
37.9
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
37.5
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
37.4
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
37.3
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
37.3
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
37.2
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
36.9
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
36.9
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
36.8
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
36.7
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
36.5
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
36.5
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
36.4
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
36.4
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
36.4
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
36.3
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
35.8
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
35.6
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
35.6
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
35.5
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
35.5
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
35.4
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
35.3
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
35.0
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
35.0
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
34.9
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
34.8
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
34.8
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
34.6
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
34.6
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
34.5
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
34.4
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
34.4
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
34.3
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
34.3
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
34.2
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
34.2
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
34.1
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
33.9
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
33.7
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
33.7
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
33.6
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
33.5
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
33.5
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
33.4
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
33.4
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
33.4
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
33.3
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
33.2
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
32.9
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
32.5
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
32.5
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
32.4
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
32.1
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
32.1
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
31.8
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
31.7
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
31.7
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
31.4
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
31.2
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
31.2
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
31.2
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
31.1
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
31.1
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
31.0
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
31.0
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
30.9
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
30.9
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
30.8
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
30.7
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
30.4
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
30.4
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
30.3
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
30.3
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
30.2
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
30.2
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
30.1
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
30.1
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
30.1
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
30.1
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
29.9
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
29.8
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
29.7
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
29.5
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
29.5
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
29.3
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
29.0
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
28.8
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
28.7
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
28.6
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
28.5
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
28.5
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
28.5
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
28.4
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
28.3
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
28.3
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
28.3
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
28.0
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
28.0
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
28.0
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
28.0
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
28.0
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
28.0
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
27.9
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
27.9
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
27.9
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
27.8
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
27.7
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
27.6
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
27.3
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
27.1
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
27.1
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
27.0
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
27.0
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
26.9
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
26.8
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
26.8
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
26.8
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
26.7
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
26.7
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
26.7
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
26.7
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
26.6
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
26.5
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
26.4
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
26.4
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
26.4
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
26.4
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
26.2
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
26.2
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
26.1
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
26.1
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
26.1
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
25.9
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
25.8
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
25.8
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
25.7
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
25.5
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
25.5
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
25.4
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
25.4
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
25.3
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
25.2
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
25.1
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
25.1
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
25.0
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
24.8
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
24.7
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
24.7
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
24.6
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
24.6
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
24.5
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
24.4
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
24.3
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
24.3
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
24.2
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
24.2
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
24.2
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
24.1
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
24.1
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
24.1
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
24.0
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
23.9
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
23.9
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
23.9
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
23.7
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
23.7
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
23.7
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
23.6
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
23.6
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
23.5
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
23.5
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
23.5
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
23.2
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
23.2
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
23.1
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
23.1
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
23.1
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
22.9
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
22.9
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
22.9
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
22.8
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
22.8
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
22.7
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
22.7
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
22.7
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
22.6
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
22.5
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
22.4
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
22.4
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
22.4
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
22.3
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
22.3
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
22.2
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
22.2
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
22.1
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
22.0
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
22.0
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
21.9
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
21.8
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
21.8
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
21.8
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
21.7
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
21.7
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
21.7
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
21.6
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
21.6
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
21.5
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
21.4
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
21.3
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
21.2
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
21.1
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
21.1
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
21.1
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
21.0
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
21.0
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
20.9
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
20.9
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
20.8
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
20.7
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
20.6
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
20.5
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
20.5
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
20.5
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
20.4
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
20.4
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
20.4
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
20.4
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
20.3
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
20.3
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
20.2
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
20.1
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
20.1
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
20.0
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
20.0
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
20.0
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
19.9
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
19.7
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
19.6
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
19.6
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
19.6
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
19.4
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
19.2
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
19.0
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
19.0
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
19.0
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
19.0
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
18.9
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
18.8
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
18.8
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
18.7
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
18.7
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
18.3
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
18.3
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
18.2
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
18.2
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
18.2
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
18.0
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
18.0
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
17.9
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
17.7
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
17.6
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
17.6
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
17.5
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
17.5
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
17.4
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
17.3
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
17.1
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
17.0
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
17.0
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
17.0
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
16.9
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
16.8
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
16.8
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
16.8
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
16.3
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
16.2
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
16.2
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
15.9
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
15.8
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
15.8
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
15.8
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
15.6
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
15.6
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
15.4
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
15.3
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
15.3
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
15.2
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
15.1
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
15.1
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
15.0
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
15.0
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
15.0
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
14.8
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
14.7
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
14.7
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
14.5
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
14.5
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
14.4
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
14.4
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
14.4
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
14.2
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
14.1
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
14.1
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
13.9
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
13.9
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
13.8
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
13.8
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
13.7
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
13.6
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
13.4
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
13.4
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
13.3
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
13.3
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
13.2
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
12.8
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
12.7
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
12.6
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
12.6
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
11.9
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
11.9
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
11.9
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
11.8
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
11.7
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
11.5
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
11.3
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
11.3
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
11.1
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
10.7
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
10.7
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
10.7
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
10.6
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
10.2
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
10.1
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
10.1
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
10.1
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
9.6
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
9.6
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
9.4
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
9.1
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
8.9
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
8.7
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
8.7
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
8.7
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
8.5
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
8.2
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
8.2
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
8.1
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
8.1
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
8.0
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
7.9
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
6.9
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
6.8
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
5.9
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
4.9
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HSDL2 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
38.2
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
101.4
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
87.5
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
76.6
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
75.3
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
71.2
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
70.7
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
70.7
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
70.0
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
65.7
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
65.4
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
62.1
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
62.0
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
60.5
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
60.0
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
60.0
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
55.0
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
54.1
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
52.4
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
51.5
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
51.5
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
51.2
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
50.6
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
50.3
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
49.8
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
48.8
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
48.7
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
48.2
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
47.9
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
47.5
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
47.2
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
47.1
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
46.2
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
45.9
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
45.6
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
44.8
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
44.5
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
44.3
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
43.9
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
43.7
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
43.4
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
43.0
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
42.6
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
41.1
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
40.7
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
39.3
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
38.7
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
38.5
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
38.4
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
37.7
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
37.3
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
37.1
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
36.0
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
35.3
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
35.2
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
34.5
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
34.3
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
34.3
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
33.9
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
32.8
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
32.3
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
32.2
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
31.6
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
30.9
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
30.6
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
30.3
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
29.2
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
28.4
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
27.9
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
26.8
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
26.0
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
25.2
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
25.0
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
24.5
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
24.5
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
23.3
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
22.2
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
21.5
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
21.3
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
20.8
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
20.1
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
19.5
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
19.4
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
18.7
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
18.6
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
18.2
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
17.5
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
15.6
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
15.4
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
15.3
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
14.9
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
14.2
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
14.2
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
13.6
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
13.5
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
12.5
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
12.4
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
11.2
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
10.8
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
10.0
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HSDL2 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
25.4
Number of samples
282
Samples
Sample
Description
TPM
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
107.2
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
94.9
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
92.1
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
87.4
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
83.4
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
83.0
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
81.6
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
77.7
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
76.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
70.4
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
64.6
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
60.4
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
56.7
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
55.4
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
54.6
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
54.1
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
52.1
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
51.9
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
48.6
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
46.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
45.8
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
45.7
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
45.5
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
45.2
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
45.0
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
44.8
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
44.0
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
43.8
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
42.1
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
41.4
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
41.4
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
41.1
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
40.9
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
40.6
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
40.5
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
39.9
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
39.4
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
39.0
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
38.8
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
37.9
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
37.6
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
37.4
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
37.2
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
36.8
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
36.2
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
36.0
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
36.0
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
35.9
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
35.8
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
35.2
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
34.9
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
34.7
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
34.0
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
34.0
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
33.3
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
33.3
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
33.2
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
33.2
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
33.0
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
32.4
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
32.4
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
32.3
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
32.2
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
32.0
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
31.9
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
31.8
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
31.8
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
31.7
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
31.5
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
31.4
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
31.2
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
31.2
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
31.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
31.0
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
30.5
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
30.4
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
30.4
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
30.4
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
30.1
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
29.7
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
29.7
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
29.3
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
28.9
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
28.7
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
28.4
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
28.0
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
27.6
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
27.4
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
27.3
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
27.3
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
27.2
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
27.1
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
26.8
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
26.4
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
26.4
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
26.3
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
26.2
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
26.2
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
26.0
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
25.9
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
25.8
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
25.4
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
25.4
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
25.4
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
25.2
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
25.0
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
24.9
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
24.8
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
24.8
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
24.8
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
24.8
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
24.7
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
24.6
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
24.4
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
24.4
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
24.3
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
24.2
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
23.9
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
23.6
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
23.5
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
23.5
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
23.5
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
23.4
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
23.2
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
22.9
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
22.9
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
22.9
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
22.7
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
22.5
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
22.4
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
22.3
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
22.3
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
22.2
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
22.0
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
21.9
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
21.9
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
21.9
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
21.7
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
21.7
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
21.5
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
21.5
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
21.1
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
21.0
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
21.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
20.9
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
20.8
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
20.7
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
20.7
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
20.7
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
20.6
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
20.3
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
20.3
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
20.3
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
20.2
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
20.1
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
20.0
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
20.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
19.8
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
19.7
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
19.6
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
19.4
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
19.4
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
19.3
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
19.3
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
19.2
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
19.1
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
18.9
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
18.9
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
18.8
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
18.8
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
18.7
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
18.5
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
18.5
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
18.4
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
18.4
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
18.4
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
18.3
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
18.3
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
18.2
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
18.2
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
18.2
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
18.1
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
17.9
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
17.8
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
17.8
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
17.8
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
17.7
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
17.6
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
17.5
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
17.5
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
17.3
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
17.3
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
17.1
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
16.8
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
16.8
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
16.7
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
16.6
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
16.5
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
16.5
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
16.3
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
16.3
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
16.3
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
16.1
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
16.0
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
16.0
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
15.9
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
15.8
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
15.6
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
15.6
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
15.5
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
15.5
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
15.4
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
15.2
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
15.0
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
14.9
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
14.9
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
14.8
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
14.7
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
14.7
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
14.6
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
14.4
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
14.4
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
14.4
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
14.4
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
14.3
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
14.2
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
14.2
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
13.9
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
13.9
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
13.9
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
13.8
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
13.7
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
13.6
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
13.4
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
13.3
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
13.1
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
12.9
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
12.7
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
12.6
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
12.6
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
12.4
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
12.3
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
12.2
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
12.1
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
11.9
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
11.8
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
11.8
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
11.8
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
11.8
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
11.7
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
11.7
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
11.7
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
11.7
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
11.6
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
11.6
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
11.5
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
11.5
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
11.5
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
11.3
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
11.2
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
10.9
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
10.7
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
10.7
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
10.6
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
10.3
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
9.9
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
9.3
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
8.7
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
8.6
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
8.0
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
7.7
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
7.4
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
6.6
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
6.5
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
6.1
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
6.0
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
6.0
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
5.5
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
5.5
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
4.5
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
3.7
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
1.8
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0088780001
Normal
1.4
CPT0002270011
Tumor
1.1
CPT0088500001
Normal
1.1
CPT0079000001
Normal
1.0
CPT0009080003
Normal
1.0
CPT0012570003
Normal
0.9
CPT0092310003
Normal
0.8
CPT0012770003
Normal
0.8
CPT0026420001
Normal
0.8
CPT0020020001
Normal
0.8
CPT0025610001
Normal
0.8
CPT0065450001
Normal
0.8
CPT0086890003
Normal
0.8
CPT0092740003
Normal
0.8
CPT0092800003
Normal
0.7
CPT0069010001
Normal
0.7
CPT0081620001
Normal
0.7
CPT0007470001
Normal
0.7
CPT0007870001
Normal
0.7
CPT0064400001
Normal
0.6
CPT0089480003
Normal
0.6
CPT0006950001
Normal
0.6
CPT0078840001
Normal
0.6
CPT0012090003
Normal
0.6
CPT0078800003
Tumor
0.6
CPT0010170001
Normal
0.6
CPT0001500009
Tumor
0.6
CPT0078670001
Normal
0.6
CPT0079430001
Normal
0.6
CPT0000790001
Normal
0.6
CPT0082010001
Normal
0.6
CPT0023360001
Normal
0.6
CPT0013790003
Normal
0.6
CPT0063640001
Normal
0.6
CPT0087050003
Normal
0.6
CPT0014350001
Normal
0.6
CPT0088920001
Normal
0.6
CPT0025060001
Normal
0.5
CPT0077140001
Normal
0.5
CPT0020130001
Normal
0.5
CPT0017450001
Normal
0.5
CPT0006730001
Normal
0.5
CPT0023710001
Normal
0.5
CPT0066430001
Normal
0.5
CPT0078940001
Normal
0.5
CPT0009060003
Tumor
0.5
CPT0088640003
Normal
0.5
CPT0077500001
Normal
0.4
CPT0086370003
Normal
0.4
CPT0012290003
Normal
0.4
CPT0076350001
Normal
0.4
CPT0086970003
Normal
0.4
CPT0001350001
Normal
0.4
CPT0078530001
Normal
0.4
CPT0079180003
Tumor
0.4
CPT0014130001
Normal
0.4
CPT0089040001
Normal
0.4
CPT0012900004
Tumor
0.3
CPT0078660003
Tumor
0.3
CPT0012920003
Normal
0.3
CPT0088710001
Normal
0.3
CPT0000890001
Normal
0.3
CPT0019160001
Normal
0.3
CPT0009020003
Normal
0.3
CPT0063330001
Normal
0.3
CPT0015730003
Tumor
0.3
CPT0086830003
Normal
0.3
CPT0001230001
Normal
0.3
CPT0065820001
Normal
0.2
CPT0002370001
Normal
0.2
CPT0075570001
Normal
0.2
CPT0024680001
Normal
0.2
CPT0020120003
Tumor
0.2
CPT0018250001
Normal
0.2
CPT0001510001
Normal
0.2
CPT0006530001
Normal
0.2
CPT0025920001
Normal
0.2
CPT0014470001
Normal
0.2
CPT0088570001
Normal
0.2
CPT0065430003
Tumor
0.1
CPT0000660001
Normal
0.1
CPT0001550001
Normal
0.1
CPT0079300001
Normal
0.1
CPT0007320003
Tumor
0.1
CPT0069190001
Normal
0.0
CPT0012640003
Normal
0.0
CPT0066520001
Normal
0.0
CPT0001190001
Normal
0.0
CPT0075170001
Normal
0.0
CPT0010120001
Normal
-0.1
CPT0000780007
Tumor
-0.2
CPT0025170003
Tumor
-0.2
CPT0079510001
Normal
-0.3
CPT0064370003
Tumor
-0.4
CPT0086870003
Tumor
-0.4
CPT0001270001
Normal
-0.4
CPT0012670003
Tumor
-0.5
CPT0075560003
Tumor
-0.5
CPT0065810003
Tumor
-0.5
CPT0000870016
Tumor
-0.5
CPT0063320003
Tumor
-0.5
CPT0078510003
Tumor
-0.6
CPT0012550003
Tumor
-0.6
CPT0089460004
Tumor
-0.6
CPT0087040003
Tumor
-0.6
CPT0088480003
Tumor
-0.6
CPT0065750003
Tumor
-0.6
CPT0086360003
Tumor
-0.6
CPT0069000003
Tumor
-0.6
CPT0079480003
Tumor
-0.6
CPT0006440003
Tumor
-0.6
CPT0024670003
Tumor
-0.6
CPT0014370004
Tumor
-0.6
CPT0079410003
Tumor
-0.6
CPT0088690003
Tumor
-0.6
CPT0079270003
Tumor
-0.6
CPT0085670003
Tumor
-0.7
CPT0092160003
Tumor
-0.7
CPT0007860003
Tumor
-0.7
CPT0078830003
Tumor
-0.7
CPT0077320001
Normal
-0.7
CPT0092190003
Normal
-0.7
CPT0025110003
Tumor
-0.7
CPT0077310003
Tumor
-0.7
CPT0009000003
Tumor
-0.7
CPT0010110003
Tumor
-0.7
CPT0023350003
Tumor
-0.7
CPT0001260009
Tumor
-0.7
CPT0001540009
Tumor
-0.7
CPT0078930003
Tumor
-0.8
CPT0012280003
Tumor
-0.8
CPT0075720003
Tumor
-0.8
CPT0011240003
Tumor
-0.8
CPT0086030003
Tumor
-0.8
CPT0084590001
Normal
-0.8
CPT0012370003
Tumor
-0.8
CPT0092290003
Tumor
-0.8
CPT0026410003
Tumor
-0.8
CPT0088970003
Tumor
-0.8
CPT0092790003
Tumor
-0.9
CPT0076330003
Tumor
-0.9
CPT0069160003
Tumor
-0.9
CPT0066480003
Tumor
-0.9
CPT0019130003
Tumor
-0.9
CPT0081990003
Tumor
-0.9
CPT0088630003
Tumor
-0.9
CPT0017410003
Tumor
-0.9
CPT0077110003
Tumor
-0.9
CPT0075130003
Tumor
-0.9
CPT0006630003
Tumor
-0.9
CPT0086950003
Tumor
-1.0
CPT0019990003
Tumor
-1.0
CPT0006900003
Tumor
-1.0
CPT0071150004
Tumor
-1.0
CPT0088900003
Tumor
-1.0
CPT0089020003
Tumor
-1.0
CPT0015810003
Tumor
-1.0
CPT0065930003
Tumor
-1.0
CPT0014160003
Tumor
-1.0
CPT0092730003
Tumor
-1.0
CPT0010160003
Tumor
-1.0
CPT0088760003
Tumor
-1.0
CPT0023690003
Tumor
-1.1
CPT0015910003
Tumor
-1.1
CPT0002350011
Tumor
-1.1
CPT0065870003
Tumor
-1.1
CPT0086820003
Tumor
-1.1
CPT0025880003
Tumor
-1.1
CPT0014450004
Tumor
-1.1
CPT0025580004
Tumor
-1.1
CPT0066470004
Tumor
-1.1
CPT0079230003
Tumor
-1.1
CPT0001220008
Tumor
-1.1
CPT0001180009
Tumor
-1.1
CPT0081600003
Tumor
-1.1
CPT0078990003
Tumor
-1.1
CPT0088550004
Tumor
-1.2
CPT0077490003
Tumor
-1.2
CPT0011410003
Tumor
-1.2
CPT0063630003
Tumor
-1.3
CPT0021240003
Tumor
-1.3
CPT0025350003
Tumor
-1.4
CPT0012180003
Tumor
-1.4
CPT0025050003
Tumor
-1.5
CPT0000640003
Tumor
-1.5
CPT0025290003
Tumor
-1.5
CPT0065690003
Tumor
-1.5
CPT0079380003
Tumor
-1.5
CPT0012080003
Tumor
-1.5
CPT0081880003
Tumor
-1.5
CPT0017850003
Tumor
-1.6
CPT0084560003
Tumor
-1.6
CPT0025230003
Tumor
-1.6
CPT0001340003
Tumor
-1.8
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
