HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:127.6 nTPM
HPA Brain:199.9 nTPM
GTEx:127.6 nTPM
FANTOM5:85.8 Scaled Tags Per Million
Pig:81.5 nTPM
Mouse:133.9 nTPM
Allen mouse:10.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA005695Antibody CAB022068Antibody CAB035999Antibody CAB080052Antibody CAB080054Antibody CAB080098
Glial cells Not detectedNot detectedMediumLowNot detectedNot detected
Neuronal cells MediumNot detectedMediumLowLowMedium









HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 199.9
Sample id Sample description nTPM
Hippocampus
nTPM: 181.8
1898 Male, age 80, left hemisphere 197.2
2621 Female, age 67, right hemisphere 192.7
2148 Female, age 91, left hemisphere 187.7
2529 Female, age 94, left hemisphere 178.1
1911 Female, age 85, right hemisphere 170.6
1855 Male, age 76, left hemisphere 164.4
Dentate gyrus
nTPM: 173.0
1927 Female, age 91, both hemispheres 204.2
2530 Female, age 94, left hemisphere 188.6
2531 Female, age 67, both hemispheres 173.4
2528 Male, age 74, both hemispheres 166.8
2246 Female, age 85, both hemispheres 153.2
2010 Male, age 76, both hemispheres 151.7
Entorhinal gyrus
nTPM: 199.9
2613 Female, age 94, left hemisphere 223.6
2686 Male, age 75, right hemisphere 223.4
2764 Male, age 80, right hemisphere 210.8
1938 Female, age 85, left hemisphere 204.5
1787 Male, age 76, left hemisphere 180.2
2117 Female, age 91, right hemisphere 157.2
Hippocampus, CA1
nTPM: 176.3
2749 Male, age 80, left hemisphere 226.5
1873 Female, age 85, both hemispheres 182.3
2082 Female, age 91, right hemisphere 167.7
2527 Male, age 74, both hemispheres 161.6
2045 Male, age 76, both hemispheres 143.4
Hippocampus, CA2
nTPM: 177.7
1963 Male, age 80, left hemisphere 207.8
2437 Female, age 94, left hemisphere 189.3
1892 Male, age 76, both hemispheres 173.3
2113 Female, age 91, right hemisphere 172.6
1940 Female, age 85, left hemisphere 168.4
2249 Male, age 74, both hemispheres 154.7
Hippocampus, CA3
nTPM: 189.0
2861 Female, age 67, both hemispheres 226.0
2620 Female, age 94, left hemisphere 212.0
2137 Male, age 80, left hemisphere 209.9
2436 Male, age 74, both hemispheres 169.7
1891 Female, age 85, both hemispheres 160.7
1867 Male, age 76, both hemispheres 155.5
Parahippocampal cortex
nTPM: 186.6
2622 Female, age 67, right hemisphere 215.6
1850 Male, age 80, both hemispheres 206.9
2693 Female, age 94, both hemispheres 196.2
1933 Female, age 85, both hemispheres 193.4
2692 Male, age 74, both hemispheres 191.7
2532 Female, age 72, left hemisphere 180.9
1990 Female, age 91, right hemisphere 176.7
2245 Female, age 91, both hemispheres 176.5
2250 Female, age 67, right hemisphere 165.6
2018 Male, age 76, both hemispheres 162.2
Perirhinal gyrus
nTPM: 197.9
1847 Female, age 91, left hemisphere 230.2
1794 Male, age 80, right hemisphere 212.0
1841 Female, age 85, right hemisphere 202.2
2848 Male, age 76, right hemisphere 183.2
2521 Female, age 94, right hemisphere 161.6
Subiculum
nTPM: 168.2
1901 Male, age 80, both hemispheres 181.6
2619 Male, age 74, both hemispheres 177.7
1977 Female, age 85, both hemispheres 174.0
2729 Female, age 91, right hemisphere 165.0
2042 Male, age 76, both hemispheres 156.3
2438 Female, age 94, left hemisphere 154.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 127.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 127.6
Samples: 197

Max nTPM: 281.4
Min nTPM: 43.2
Std nTPM: 38.6
Median nTPM: 125.8
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 281.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 259.4
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 245.9
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 202.5
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 201.1
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 199.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 196.2
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 196.0
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 194.5
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 192.2
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 191.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 85.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 85.8
FF:10169-103B7 60 years, female 102.8
FF:10153-102I9 76 years, female 68.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 81.5
Pig sample Sample description nTPM
Subiculum
nTPM: 67.4
Samples: 4

Max nTPM: 89.4
Min nTPM: 56.7
Sample A Female 89.4
Sample B Female 60.2
Sample C Male 63.1
Sample D Male 56.7
Dorsal hippocampus
nTPM: 68.7
Samples: 4

Max nTPM: 85.3
Min nTPM: 52.9
Sample A Female 85.3
Sample B Female 70.5
Sample C Male 66.0
Sample D Male 52.9
Entorhinal cortex
nTPM: 81.5
Samples: 4

Max nTPM: 90.2
Min nTPM: 68.3
Sample A Female 81.7
Sample B Female 90.2
Sample C Male 85.7
Sample D Male 68.3
Ventral hippocampus
nTPM: 68.6
Samples: 4

Max nTPM: 85.3
Min nTPM: 51.2
Sample A Female 64.1
Sample B Female 51.2
Sample C Male 85.3
Sample D Male 73.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 133.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 133.9
Samples: 4

Max nTPM: 137.5
Min nTPM: 127.7
Sample A Male 135.6
Sample B Male 127.7
Sample C Female 137.5
Sample D Female 134.8
Hippocampal formation
nTPM: 128.8
Samples: 4

Max nTPM: 137.3
Min nTPM: 118.9
Sample A Male 137.3
Sample B Male 118.9
Sample C Female 129.1
Sample D Female 130.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 10.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.0
68668048 Antisense, RP_050203_01_C11, Mouse strain C57BL/6J (56 days, male) 10.0

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