HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:31.9 nTPM
HPA Brain:57.5 nTPM
GTEx:31.9 nTPM
FANTOM5:54.8 Scaled Tags Per Million
Pig:26.6 nTPM
Mouse:31.9 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 57.5
Sample id Sample description nTPM
Hippocampus
nTPM: 49.9
1898 Male, age 80, left hemisphere 62.9
2529 Female, age 94, left hemisphere 53.6
2621 Female, age 67, right hemisphere 51.9
1855 Male, age 76, left hemisphere 51.5
1911 Female, age 85, right hemisphere 40.7
2148 Female, age 91, left hemisphere 38.5
Dentate gyrus
nTPM: 49.6
2530 Female, age 94, left hemisphere 56.6
2010 Male, age 76, both hemispheres 52.3
2528 Male, age 74, both hemispheres 49.6
2246 Female, age 85, both hemispheres 49.0
1927 Female, age 91, both hemispheres 46.2
2531 Female, age 67, both hemispheres 44.2
Entorhinal gyrus
nTPM: 53.0
2764 Male, age 80, right hemisphere 60.1
1938 Female, age 85, left hemisphere 53.4
2613 Female, age 94, left hemisphere 53.4
1787 Male, age 76, left hemisphere 52.5
2686 Male, age 75, right hemisphere 51.9
2117 Female, age 91, right hemisphere 46.7
Hippocampus, CA1
nTPM: 48.5
2749 Male, age 80, left hemisphere 60.1
1873 Female, age 85, both hemispheres 50.7
2527 Male, age 74, both hemispheres 48.0
2082 Female, age 91, right hemisphere 44.1
2045 Male, age 76, both hemispheres 39.7
Hippocampus, CA2
nTPM: 52.0
1892 Male, age 76, both hemispheres 71.0
2437 Female, age 94, left hemisphere 58.8
2249 Male, age 74, both hemispheres 51.4
1963 Male, age 80, left hemisphere 47.1
2113 Female, age 91, right hemisphere 41.8
1940 Female, age 85, left hemisphere 41.6
Hippocampus, CA3
nTPM: 53.7
1867 Male, age 76, both hemispheres 67.8
2620 Female, age 94, left hemisphere 54.0
2137 Male, age 80, left hemisphere 51.9
2861 Female, age 67, both hemispheres 51.3
2436 Male, age 74, both hemispheres 51.0
1891 Female, age 85, both hemispheres 45.9
Parahippocampal cortex
nTPM: 56.4
1850 Male, age 80, both hemispheres 71.9
2532 Female, age 72, left hemisphere 62.3
1933 Female, age 85, both hemispheres 59.9
2622 Female, age 67, right hemisphere 58.1
1990 Female, age 91, right hemisphere 54.7
2250 Female, age 67, right hemisphere 53.4
2692 Male, age 74, both hemispheres 53.0
2245 Female, age 91, both hemispheres 52.7
2018 Male, age 76, both hemispheres 52.3
2693 Female, age 94, both hemispheres 46.1
Perirhinal gyrus
nTPM: 57.5
1847 Female, age 91, left hemisphere 66.2
1841 Female, age 85, right hemisphere 61.4
1794 Male, age 80, right hemisphere 58.9
2521 Female, age 94, right hemisphere 51.6
2848 Male, age 76, right hemisphere 49.6
Subiculum
nTPM: 49.7
2438 Female, age 94, left hemisphere 65.1
1977 Female, age 85, both hemispheres 52.1
2619 Male, age 74, both hemispheres 48.9
1901 Male, age 80, both hemispheres 46.6
2042 Male, age 76, both hemispheres 43.7
2729 Female, age 91, right hemisphere 41.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 31.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 31.9
Samples: 197

Max nTPM: 63.8
Min nTPM: 15.4
Std nTPM: 9.4
Median nTPM: 30.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 63.8
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 61.5
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 59.7
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 58.2
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 57.2
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 54.8
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 54.1
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 53.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 52.5
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 51.7
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 50.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 54.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 54.8
FF:10153-102I9 76 years, female 58.7
FF:10169-103B7 60 years, female 50.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 26.6
Pig sample Sample description nTPM
Subiculum
nTPM: 21.7
Samples: 4

Max nTPM: 23.0
Min nTPM: 20.6
Sample A Female 23.0
Sample B Female 22.1
Sample C Male 20.6
Sample D Male 21.2
Dorsal hippocampus
nTPM: 23.6
Samples: 4

Max nTPM: 25.2
Min nTPM: 20.2
Sample A Female 25.1
Sample B Female 23.7
Sample C Male 25.2
Sample D Male 20.2
Entorhinal cortex
nTPM: 26.7
Samples: 4

Max nTPM: 31.4
Min nTPM: 23.3
Sample A Female 25.3
Sample B Female 31.4
Sample C Male 23.3
Sample D Male 26.6
Ventral hippocampus
nTPM: 21.9
Samples: 4

Max nTPM: 22.4
Min nTPM: 21.0
Sample A Female 22.4
Sample B Female 22.0
Sample C Male 21.0
Sample D Male 22.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 31.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 27.3
Samples: 4

Max nTPM: 30.0
Min nTPM: 24.7
Sample A Male 30.0
Sample B Male 24.8
Sample C Female 29.5
Sample D Female 24.7
Hippocampal formation
nTPM: 31.9
Samples: 4

Max nTPM: 37.3
Min nTPM: 28.4
Sample A Male 37.3
Sample B Male 29.1
Sample C Female 28.4
Sample D Female 32.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
68523324 Antisense, RP_050118_02_E08, Mouse strain C57BL/6J (56 days, male) 0.2
71015806 Antisense, RP_050725_02_H04, Mouse strain C57BL/6J (56 days, male) 0.1

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