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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NSL1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
6.6
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
35.0
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
18.5
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
14.8
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
14.7
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
14.0
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
12.6
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
11.8
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
11.5
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
10.8
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
10.1
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
9.3
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
9.2
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
9.2
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
9.2
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
9.1
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
8.9
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
8.6
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
8.5
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
8.3
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
8.2
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
8.1
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
7.9
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
7.5
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
7.4
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
7.4
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
7.3
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
7.2
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
7.2
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
7.1
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
6.9
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
6.4
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
6.2
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
6.0
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
6.0
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
5.1
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
4.9
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
4.7
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
4.6
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
4.5
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
4.5
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
4.5
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
4.1
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
4.0
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
4.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
4.0
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
3.9
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
3.4
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
3.4
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
3.1
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
2.9
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
2.7
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
2.4
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
2.1
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
2.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
1.7
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
1.2
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
1.2
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
1.2
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
1.1
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
0.7
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
0.5
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
0.5
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
0.4
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NSL1 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
19.1
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
65.1
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
51.7
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
49.8
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
42.4
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
40.7
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
39.7
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
37.1
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
36.9
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
36.7
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
35.2
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
35.2
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
35.1
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
34.3
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
34.2
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
33.9
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
33.9
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
33.6
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
33.4
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
33.2
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
33.2
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
33.1
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
32.8
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
32.8
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
32.6
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
32.6
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
32.6
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
32.5
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
32.0
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
31.7
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
31.7
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
31.6
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
31.6
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
31.5
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
31.4
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
31.2
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
31.1
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
31.0
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
30.7
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
30.6
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
30.6
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
30.5
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
30.2
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
30.1
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
30.1
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
30.0
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
29.9
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
29.5
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
29.5
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
29.3
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
29.2
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
29.1
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
29.1
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
29.1
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
29.0
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
29.0
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
28.9
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
28.9
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
28.8
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
28.8
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
28.7
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
28.5
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
28.5
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
28.4
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
28.3
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
28.2
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
28.1
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
28.1
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
28.0
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
28.0
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
27.8
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
27.8
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
27.4
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
27.4
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
27.4
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
27.3
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
27.3
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
27.3
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
27.2
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
27.1
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
27.0
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
27.0
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
26.9
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
26.9
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
26.9
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
26.8
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
26.8
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
26.8
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
26.8
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
26.6
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
26.6
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
26.6
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
26.5
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
26.4
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
26.4
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
26.4
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
26.4
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
26.3
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
26.2
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
26.2
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
26.2
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
26.2
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
26.2
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
26.1
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
26.1
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
26.0
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
26.0
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
25.9
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
25.8
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
25.8
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
25.8
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
25.8
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
25.8
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
25.7
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
25.7
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
25.7
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
25.7
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
25.5
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
25.5
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
25.4
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
25.3
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
25.3
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
25.2
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
25.1
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
25.1
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
25.1
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
25.0
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
25.0
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
25.0
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
24.9
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
24.9
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
24.8
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
24.8
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
24.8
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
24.7
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
24.7
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
24.7
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
24.7
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
24.6
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
24.3
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
24.3
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
24.3
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
24.2
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
24.2
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
24.2
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
24.2
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
24.2
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
24.1
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
24.1
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
24.1
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
24.1
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
24.1
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
23.8
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
23.7
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
23.7
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
23.6
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
23.5
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
23.5
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
23.4
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
23.3
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
23.2
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
23.2
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
23.2
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
23.2
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
23.1
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
23.1
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
23.1
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
23.0
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
22.9
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
22.7
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
22.7
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
22.7
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
22.6
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
22.6
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
22.6
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
22.6
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
22.6
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
22.6
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
22.5
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
22.5
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
22.5
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
22.4
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
22.4
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
22.4
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
22.4
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
22.3
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
22.3
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
22.3
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
22.3
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
22.3
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
22.1
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
22.0
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
22.0
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
22.0
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
21.9
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
21.9
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
21.9
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
21.9
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
21.8
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
21.7
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
21.7
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
21.6
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
21.6
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
21.6
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
21.6
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
21.6
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
21.4
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
21.4
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
21.4
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
21.4
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
21.4
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
21.3
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
21.3
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
21.3
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
21.3
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
21.2
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
21.1
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
21.1
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
21.0
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
20.9
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
20.9
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
20.9
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
20.9
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
20.9
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
20.8
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
20.8
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
20.8
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
20.8
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
20.8
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
20.7
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
20.7
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
20.5
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
20.5
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
20.5
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
20.3
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
20.2
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
20.1
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
20.1
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
20.1
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
20.1
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
20.0
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
20.0
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
20.0
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
20.0
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
19.9
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
19.9
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
19.7
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
19.7
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
19.7
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
19.7
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
19.6
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
19.5
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
19.5
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
19.5
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
19.5
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
19.5
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
19.3
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
19.3
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
19.3
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
19.3
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
19.3
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
19.3
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
19.2
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
19.2
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
19.1
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
19.1
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
19.1
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
19.1
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
19.0
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
19.0
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
19.0
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
18.9
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
18.9
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
18.9
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
18.8
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
18.8
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
18.8
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
18.8
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
18.8
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
18.7
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
18.7
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
18.6
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
18.6
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
18.6
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
18.5
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
18.5
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
18.5
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
18.5
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
18.4
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
18.4
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
18.4
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
18.4
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
18.3
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
18.2
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
18.2
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
18.2
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
18.1
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
18.1
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
18.1
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
18.1
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
18.0
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
18.0
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
17.9
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
17.8
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
17.7
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
17.7
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
17.6
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
17.4
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
17.3
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
17.3
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
17.3
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
17.3
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
17.2
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
17.1
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
17.1
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
17.1
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
17.1
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
17.0
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
17.0
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
17.0
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
17.0
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
16.9
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
16.9
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
16.9
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
16.7
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
16.7
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
16.7
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
16.6
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
16.6
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
16.5
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
16.5
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
16.4
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
16.4
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
16.4
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
16.4
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
16.3
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
16.2
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
16.2
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
16.1
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
16.1
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
16.1
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
16.1
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
16.1
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
16.1
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
16.1
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
16.0
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
16.0
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
16.0
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
15.9
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
15.9
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
15.9
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
15.8
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
15.7
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
15.6
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
15.5
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
15.5
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
15.4
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
15.4
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
15.4
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
15.3
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
15.1
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
15.1
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
15.1
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
15.0
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
15.0
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
15.0
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
14.9
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
14.7
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
14.7
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
14.7
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
14.6
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
14.6
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
14.6
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
14.5
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
14.5
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
14.5
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
14.5
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
14.4
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
14.3
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
14.3
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
14.2
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
14.2
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
14.0
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
13.9
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
13.9
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
13.8
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
13.8
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
13.8
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
13.7
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
13.5
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
13.5
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
13.4
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
13.4
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
13.3
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
13.2
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
13.1
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
13.1
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
13.0
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
12.9
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
12.8
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
12.8
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
12.8
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
12.7
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
12.6
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
12.5
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
12.4
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
12.4
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
12.3
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
12.3
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
12.2
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
12.2
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
12.1
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
11.9
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
11.9
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
11.9
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
11.8
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
11.8
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
11.7
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
11.7
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
11.7
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
11.7
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
11.6
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
11.5
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
11.4
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
11.4
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
11.2
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
11.2
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
11.1
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
11.0
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
10.8
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
10.7
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
10.7
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
10.7
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
10.6
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
10.4
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
10.4
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
10.2
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
10.2
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
9.7
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
9.6
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
9.6
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
9.6
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
9.4
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
9.2
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
9.1
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
9.0
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
9.0
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
9.0
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
9.0
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
8.7
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
8.6
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
8.4
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
8.3
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
8.3
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
8.2
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
8.2
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
8.2
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
8.2
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
8.1
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
8.1
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
8.1
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
8.0
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
8.0
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
8.0
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
7.9
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
7.9
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
7.9
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
7.8
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
7.8
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
7.8
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
7.7
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
7.7
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
7.6
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
7.5
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
7.3
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
7.3
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
7.3
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
7.2
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
7.1
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
7.1
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
6.9
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
6.9
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
6.8
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
6.8
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
6.8
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
6.7
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
6.5
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
6.4
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
6.3
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
6.1
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
6.0
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
5.9
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
5.9
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
5.8
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
5.7
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
5.7
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
5.6
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
5.5
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
5.4
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
5.2
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
5.2
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
5.2
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
4.9
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
4.5
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
4.4
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
4.3
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
4.3
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
3.9
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
3.6
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
3.5
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
3.3
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
3.3
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
3.3
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
3.2
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
2.7
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
2.5
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
2.3
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
2.3
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
2.1
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
2.0
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
0.9
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NSL1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
21.4
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
46.7
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
38.4
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
34.8
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
34.0
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
33.6
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
32.0
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
32.0
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
30.9
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
30.7
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
30.0
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
29.7
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
29.0
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
29.0
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
28.8
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
28.1
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
28.0
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
27.7
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
27.6
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
27.5
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
27.3
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
27.3
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
27.1
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
26.5
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
26.5
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
26.4
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
26.3
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
26.2
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
26.0
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
25.7
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
25.6
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
25.2
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
25.1
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
24.9
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
23.9
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
23.8
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
23.7
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
23.6
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
23.5
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
23.4
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
23.0
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
23.0
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
22.9
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
22.7
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
22.7
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
22.7
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
22.2
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
22.2
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
22.1
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
21.8
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
21.7
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
21.6
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
21.4
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
21.0
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
20.9
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
20.8
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
20.8
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
20.7
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
20.6
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
20.3
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
19.4
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
19.4
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
19.3
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
19.3
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
19.2
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
19.2
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
19.0
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
18.5
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
18.4
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
18.4
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
18.4
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
18.2
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
18.0
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
17.6
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
17.5
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
16.8
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
16.4
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
16.0
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
15.9
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
15.8
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
15.6
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
15.6
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
15.3
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
14.4
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
13.8
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
13.3
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
13.3
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
13.2
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
13.1
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
12.7
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
12.3
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
12.0
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
11.6
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
10.9
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
9.3
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
9.1
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
8.2
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
8.1
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
7.9
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
7.6
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NSL1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
13.5
Number of samples
282
Samples
Sample
Description
TPM
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
56.2
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
48.2
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
46.0
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
39.9
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
33.8
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
32.5
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
30.6
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
30.3
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
27.7
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
27.3
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
26.8
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
26.5
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
26.3
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
26.0
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
25.9
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
25.7
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
25.6
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
25.5
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
25.3
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
25.3
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
24.9
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
24.5
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
24.5
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
24.4
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
24.3
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
24.3
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
23.8
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
23.5
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
23.1
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
23.1
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
23.0
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
22.7
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
22.4
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
22.4
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
22.4
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
22.3
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
22.2
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
21.9
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
21.8
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
21.5
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
21.5
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
21.3
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
21.3
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
21.1
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
21.1
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
21.0
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
20.9
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
20.9
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
20.9
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
20.8
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
20.7
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
20.6
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
20.5
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
20.5
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
20.0
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
19.9
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
19.9
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
19.8
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
19.7
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
19.6
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
19.5
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
19.0
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
19.0
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
18.8
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
18.8
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
18.7
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
18.7
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
18.6
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
18.6
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
18.6
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
18.6
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
18.5
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
18.5
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
18.4
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
18.4
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
18.1
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
18.0
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
17.9
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
17.9
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
17.8
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
17.8
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
17.5
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
17.1
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
17.1
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
17.0
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
17.0
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
16.9
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
16.9
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
16.8
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
16.8
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
16.8
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
16.7
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
16.7
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
16.6
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
16.5
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
16.2
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
16.2
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
16.2
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
16.0
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
15.9
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
15.8
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
15.7
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
15.7
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
15.4
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
15.3
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
15.3
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
15.2
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
15.1
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
15.1
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
15.1
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
15.0
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
14.9
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
14.9
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
14.9
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
14.8
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
14.7
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
14.6
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
14.5
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
14.4
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
14.4
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
14.4
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
14.4
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
14.0
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
13.9
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
13.9
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
13.8
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
13.8
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
13.7
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
13.6
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
13.6
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
13.5
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
13.3
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
13.3
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
13.2
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
13.1
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
13.1
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
13.0
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
12.9
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
12.9
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
12.7
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
12.7
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
12.5
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
12.5
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
12.5
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
12.5
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
12.5
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
12.4
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
12.3
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
12.2
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
12.2
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
12.0
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
11.9
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
11.9
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
11.8
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
11.8
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
11.8
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
11.7
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
11.7
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
11.7
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
11.7
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
11.6
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
11.5
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
11.4
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
11.4
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
11.3
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
11.3
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
11.3
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
11.3
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
11.3
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
11.2
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
11.1
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
11.0
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
11.0
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
11.0
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
10.9
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
10.8
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
10.7
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
10.7
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
10.6
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
10.6
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
10.4
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
10.4
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
10.1
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
10.0
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
10.0
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
9.9
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
9.9
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
9.6
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
9.5
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
9.2
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
9.1
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
9.0
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
8.9
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
8.8
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
8.7
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
8.7
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
8.6
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
8.6
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
8.6
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
8.4
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
8.4
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
8.1
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
8.1
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
8.0
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
7.9
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
7.9
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
7.8
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
7.8
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
7.7
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
7.7
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
7.7
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
7.7
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
7.4
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
7.3
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
7.2
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
7.1
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
7.1
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
7.1
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
7.0
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
6.9
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
6.9
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
6.8
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
6.6
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
6.6
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
6.4
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
6.4
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
6.3
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
6.3
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
6.0
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
5.9
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
5.7
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
5.6
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
5.2
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
5.1
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
5.1
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
5.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
5.0
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
4.9
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
4.9
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
4.9
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
4.8
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
4.8
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
4.8
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
4.8
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
4.7
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
4.5
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
4.4
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
4.2
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
4.1
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
4.0
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
4.0
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
4.0
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
4.0
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
3.7
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
3.7
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
3.5
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
3.2
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
3.2
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
3.1
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
3.1
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
2.9
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
2.9
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
2.7
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
2.6
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
2.6
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
2.5
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
2.4
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
1.9
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
1.9
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
1.6
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
1.6
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
1.5
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
1.4
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
1.4
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
1.4
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
1.1
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
1.1
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
0.9
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
0.7
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
0.7
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
0.5
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
0.3
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0086950003
Tumor
1.1
CPT0069160003
Tumor
0.8
CPT0006440003
Tumor
0.7
CPT0079180003
Tumor
0.7
CPT0071150004
Tumor
0.7
CPT0015910003
Tumor
0.7
CPT0000780007
Tumor
0.7
CPT0012180003
Tumor
0.7
CPT0001340003
Tumor
0.6
CPT0026410003
Tumor
0.6
CPT0014370004
Tumor
0.6
CPT0087040003
Tumor
0.6
CPT0001220008
Tumor
0.6
CPT0014450004
Tumor
0.6
CPT0065930003
Tumor
0.5
CPT0088550004
Tumor
0.5
CPT0079380003
Tumor
0.5
CPT0066480003
Tumor
0.5
CPT0007860003
Tumor
0.5
CPT0088760003
Tumor
0.5
CPT0014160003
Tumor
0.5
CPT0000640003
Tumor
0.4
CPT0089020003
Tumor
0.4
CPT0025290003
Tumor
0.4
CPT0075130003
Tumor
0.4
CPT0009060003
Tumor
0.4
CPT0064370003
Tumor
0.4
CPT0012900004
Tumor
0.4
CPT0092790003
Tumor
0.4
CPT0076330003
Tumor
0.4
CPT0025050003
Tumor
0.4
CPT0088690003
Tumor
0.4
CPT0023690003
Tumor
0.4
CPT0063320003
Tumor
0.4
CPT0092160003
Tumor
0.4
CPT0017850003
Tumor
0.3
CPT0006630003
Tumor
0.3
CPT0075560003
Tumor
0.3
CPT0088900003
Tumor
0.3
CPT0025350003
Tumor
0.3
CPT0025110003
Tumor
0.3
CPT0078930003
Tumor
0.3
CPT0001230001
Normal
0.3
CPT0079480003
Tumor
0.3
CPT0088630003
Tumor
0.3
CPT0012550003
Tumor
0.3
CPT0002350011
Tumor
0.3
CPT0010160003
Tumor
0.3
CPT0065690003
Tumor
0.3
CPT0000870016
Tumor
0.3
CPT0017410003
Tumor
0.3
CPT0081990003
Tumor
0.2
CPT0009000003
Tumor
0.2
CPT0077110003
Tumor
0.2
CPT0081600003
Tumor
0.2
CPT0012370003
Tumor
0.2
CPT0078510003
Tumor
0.2
CPT0079410003
Tumor
0.2
CPT0012080003
Tumor
0.2
CPT0066470004
Tumor
0.2
CPT0063630003
Tumor
0.2
CPT0024670003
Tumor
0.2
CPT0065810003
Tumor
0.2
CPT0089460004
Tumor
0.2
CPT0077490003
Tumor
0.2
CPT0001260009
Tumor
0.2
CPT0025580004
Tumor
0.2
CPT0001500009
Tumor
0.2
CPT0025170003
Tumor
0.2
CPT0025230003
Tumor
0.2
CPT0010110003
Tumor
0.2
CPT0019990003
Tumor
0.2
CPT0015810003
Tumor
0.2
CPT0078990003
Tumor
0.1
CPT0065430003
Tumor
0.1
CPT0065870003
Tumor
0.1
CPT0014130001
Normal
0.1
CPT0065750003
Tumor
0.1
CPT0086360003
Tumor
0.1
CPT0012670003
Tumor
0.1
CPT0086820003
Tumor
0.1
CPT0019130003
Tumor
0.1
CPT0079510001
Normal
0.1
CPT0092730003
Tumor
0.1
CPT0009020003
Normal
0.1
CPT0007320003
Tumor
0.1
CPT0014470001
Normal
0.1
CPT0011240003
Tumor
0.1
CPT0006900003
Tumor
0.1
CPT0075720003
Tumor
0.1
CPT0079270003
Tumor
0.1
CPT0092190003
Normal
0.1
CPT0077310003
Tumor
0.1
CPT0078830003
Tumor
0.1
CPT0081880003
Tumor
0.1
CPT0086030003
Tumor
0.0
CPT0069000003
Tumor
0.0
CPT0021240003
Tumor
0.0
CPT0088480003
Tumor
0.0
CPT0092310003
Normal
0.0
CPT0024680001
Normal
0.0
CPT0011410003
Tumor
0.0
CPT0010120001
Normal
0.0
CPT0019160001
Normal
0.0
CPT0079230003
Tumor
0.0
CPT0075170001
Normal
0.0
CPT0001540009
Tumor
0.0
CPT0025060001
Normal
0.0
CPT0079300001
Normal
0.0
CPT0012280003
Tumor
0.0
CPT0086870003
Tumor
-0.1
CPT0078660003
Tumor
-0.1
CPT0092800003
Normal
-0.1
CPT0077500001
Normal
-0.1
CPT0000890001
Normal
-0.1
CPT0020120003
Tumor
-0.1
CPT0084560003
Tumor
-0.1
CPT0025880003
Tumor
-0.1
CPT0079430001
Normal
-0.1
CPT0001180009
Tumor
-0.1
CPT0002370001
Normal
-0.1
CPT0025610001
Normal
-0.1
CPT0006950001
Normal
-0.1
CPT0078800003
Tumor
-0.1
CPT0078940001
Normal
-0.1
CPT0001510001
Normal
-0.1
CPT0014350001
Normal
-0.1
CPT0063330001
Normal
-0.1
CPT0069190001
Normal
-0.1
CPT0085670003
Tumor
-0.1
CPT0078530001
Normal
-0.1
CPT0015730003
Tumor
-0.1
CPT0089480003
Normal
-0.1
CPT0020020001
Normal
-0.1
CPT0092290003
Tumor
-0.1
CPT0075570001
Normal
-0.1
CPT0006530001
Normal
-0.1
CPT0009080003
Normal
-0.1
CPT0012920003
Normal
-0.2
CPT0012770003
Normal
-0.2
CPT0076350001
Normal
-0.2
CPT0000660001
Normal
-0.2
CPT0001270001
Normal
-0.2
CPT0088920001
Normal
-0.2
CPT0012290003
Normal
-0.2
CPT0065820001
Normal
-0.2
CPT0012640003
Normal
-0.2
CPT0077320001
Normal
-0.2
CPT0081620001
Normal
-0.2
CPT0077140001
Normal
-0.2
CPT0088500001
Normal
-0.2
CPT0023710001
Normal
-0.2
CPT0087050003
Normal
-0.2
CPT0012570003
Normal
-0.2
CPT0025920001
Normal
-0.2
CPT0001350001
Normal
-0.2
CPT0001550001
Normal
-0.2
CPT0089040001
Normal
-0.2
CPT0063640001
Normal
-0.2
CPT0018250001
Normal
-0.2
CPT0010170001
Normal
-0.2
CPT0078840001
Normal
-0.2
CPT0088710001
Normal
-0.2
CPT0013790003
Normal
-0.2
CPT0066520001
Normal
-0.2
CPT0006730001
Normal
-0.2
CPT0084590001
Normal
-0.3
CPT0026420001
Normal
-0.3
CPT0086890003
Normal
-0.3
CPT0079000001
Normal
-0.3
CPT0007470001
Normal
-0.3
CPT0002270011
Tumor
-0.3
CPT0086370003
Normal
-0.3
CPT0069010001
Normal
-0.3
CPT0012090003
Normal
-0.3
CPT0088640003
Normal
-0.3
CPT0088570001
Normal
-0.3
CPT0023360001
Normal
-0.3
CPT0078670001
Normal
-0.3
CPT0017450001
Normal
-0.3
CPT0082010001
Normal
-0.3
CPT0001190001
Normal
-0.3
CPT0064400001
Normal
-0.3
CPT0007870001
Normal
-0.3
CPT0088780001
Normal
-0.3
CPT0086830003
Normal
-0.3
CPT0023350003
Tumor
-0.4
CPT0066430001
Normal
-0.4
CPT0088970003
Tumor
-0.4
CPT0020130001
Normal
-0.5
CPT0065450001
Normal
-0.5
CPT0092740003
Normal
-0.5
CPT0086970003
Normal
-0.5
CPT0000790001
Normal
-0.5
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
