We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SYF2 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
31.4
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
72.2
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
66.0
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
64.1
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
61.4
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
60.3
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
53.8
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
47.6
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
46.6
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
44.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
43.7
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
43.4
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
40.2
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
39.4
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
37.1
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
36.8
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
36.3
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
36.2
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
35.4
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
34.6
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
34.6
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
34.4
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
33.9
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
33.2
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
32.5
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
32.3
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
31.4
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
30.6
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
30.5
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
29.9
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
29.6
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
28.7
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
28.5
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
27.5
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
26.8
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
26.4
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
25.7
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
25.6
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
25.3
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
25.3
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
24.3
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
24.3
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
24.1
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
23.2
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
22.7
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
22.7
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
22.5
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
22.4
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
22.3
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
22.2
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
21.9
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
21.8
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
21.8
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
21.4
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
21.3
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
21.1
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
21.0
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
19.2
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
18.6
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
18.3
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
18.1
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
17.8
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
17.6
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
16.2
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SYF2 is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
51.0
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
149.4
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
123.9
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
117.6
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
114.1
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
102.1
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
97.9
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
96.4
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
95.1
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
94.7
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
93.5
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
92.6
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
89.2
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
89.1
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
88.2
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
86.3
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
84.4
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
84.3
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
83.6
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
83.4
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
82.6
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
82.2
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
81.6
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
81.4
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
81.0
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
79.5
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
79.5
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
79.4
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
79.3
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
78.6
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
77.9
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
77.9
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
77.8
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
77.4
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
77.4
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
77.4
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
76.6
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
76.4
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
76.2
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
75.9
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
75.0
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
74.5
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
73.8
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
73.7
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
73.4
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
73.3
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
73.3
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
73.2
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
73.1
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
72.9
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
72.7
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
72.4
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
72.3
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
72.2
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
72.2
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
72.1
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
71.9
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
71.5
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
70.9
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
70.6
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
70.5
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
70.2
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
70.1
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
70.1
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
70.0
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
69.6
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
69.4
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
69.0
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
68.9
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
68.6
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
68.6
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
67.9
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
67.9
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
67.4
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
67.3
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
67.2
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
66.8
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
66.3
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
66.3
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
65.8
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
65.7
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
65.6
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
65.6
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
65.5
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
65.5
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
65.2
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
65.1
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
65.0
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
64.8
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
64.8
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
64.8
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
64.4
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
64.1
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
64.0
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
63.9
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
63.9
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
63.8
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
63.5
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
63.5
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
63.4
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
63.2
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
63.1
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
63.1
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
62.9
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
62.7
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
62.6
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
62.6
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
62.5
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
62.3
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
62.2
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
62.2
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
62.1
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
62.1
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
62.1
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
62.0
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
61.9
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
61.9
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
61.8
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
61.8
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
61.8
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
61.6
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
61.5
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
61.4
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
61.4
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
61.4
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
61.3
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
61.3
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
61.2
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
61.1
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
61.0
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
61.0
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
60.8
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
60.8
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
60.7
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
60.5
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
60.4
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
60.4
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
60.1
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
60.1
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
59.8
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
59.7
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
59.7
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
59.6
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
59.6
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
59.5
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
59.4
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
59.3
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
59.3
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
59.2
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
59.0
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
58.9
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
58.9
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
58.9
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
58.8
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
58.8
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
58.8
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
58.8
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
58.6
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
58.6
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
58.2
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
58.2
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
58.1
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
58.1
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
57.9
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
57.8
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
57.7
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
57.7
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
57.6
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
57.6
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
57.4
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
57.4
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
57.4
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
57.4
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
57.2
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
57.2
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
57.0
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
57.0
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
57.0
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
56.9
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
56.9
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
56.5
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
56.2
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
56.2
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
56.1
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
56.0
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
56.0
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
56.0
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
55.9
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
55.7
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
55.7
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
55.6
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
55.6
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
55.6
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
55.6
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
55.5
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
55.3
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
55.2
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
55.1
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
55.0
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
54.9
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
54.9
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
54.9
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
54.7
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
54.7
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
54.6
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
54.5
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
54.5
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
54.3
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
54.3
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
54.3
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
54.3
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
54.2
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
54.2
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
54.2
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
54.2
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
54.0
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
53.8
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
53.8
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
53.7
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
53.7
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
53.6
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
53.5
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
53.5
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
53.3
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
53.2
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
53.1
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
53.0
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
53.0
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
52.9
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
52.9
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
52.8
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
52.7
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
52.7
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
52.4
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
52.4
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
52.0
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
52.0
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
51.9
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
51.8
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
51.8
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
51.7
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
51.3
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
51.2
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
51.2
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
51.0
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
50.9
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
50.9
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
50.8
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
50.7
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
50.7
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
50.5
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
50.5
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
50.5
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
50.5
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
50.3
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
50.3
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
50.2
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
50.1
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
50.1
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
50.1
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
50.1
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
50.0
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
50.0
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
49.8
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
49.8
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
49.8
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
49.8
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
49.6
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
49.6
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
49.3
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
49.3
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
49.2
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
49.2
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
49.1
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
49.1
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
49.1
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
48.8
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
48.7
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
48.7
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
48.7
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
48.6
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
48.6
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
48.6
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
48.5
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
48.3
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
48.3
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
48.1
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
48.1
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
48.1
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
48.0
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
47.7
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
47.6
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
47.6
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
47.5
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
47.5
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
47.4
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
47.3
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
47.2
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
47.2
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
47.1
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
47.1
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
47.1
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
47.0
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
46.9
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
46.9
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
46.6
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
46.6
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
46.6
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
46.3
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
46.3
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
46.1
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
46.0
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
46.0
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
46.0
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
45.9
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
45.9
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
45.8
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
45.8
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
45.8
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
45.7
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
45.7
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
45.7
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
45.6
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
45.5
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
45.5
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
45.5
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
45.4
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
45.1
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
45.1
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
44.9
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
44.8
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
44.6
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
44.5
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
44.5
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
44.4
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
44.3
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
44.2
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
44.1
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
44.1
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
44.1
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
44.0
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
44.0
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
44.0
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
44.0
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
43.7
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
43.5
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
43.4
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
43.4
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
43.4
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
43.1
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
43.0
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
42.9
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
42.9
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
42.9
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
42.8
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
42.7
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
42.7
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
42.7
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
42.6
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
42.6
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
42.5
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
42.5
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
42.3
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
42.2
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
42.2
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
42.2
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
42.1
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
42.0
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
42.0
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
41.9
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
41.8
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
41.7
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
41.5
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
41.5
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
41.5
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
41.4
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
41.3
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
41.2
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
41.0
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
41.0
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
40.9
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
40.7
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
40.6
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
40.5
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
40.5
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
40.4
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
40.4
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
40.3
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
40.3
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
40.3
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
40.2
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
40.1
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
40.0
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
39.8
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
39.8
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
39.6
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
39.6
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
39.6
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
39.3
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
39.0
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
38.9
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
38.9
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
38.8
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
38.8
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
38.7
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
38.7
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
38.6
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
38.5
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
38.5
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
38.5
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
38.3
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
38.3
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
38.2
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
38.1
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
38.0
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
38.0
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
37.8
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
37.8
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
37.7
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
37.6
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
37.5
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
37.4
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
37.4
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
37.2
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
37.1
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
37.1
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
36.5
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
36.2
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
35.8
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
35.7
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
35.5
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
35.4
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
35.3
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
35.1
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
35.1
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
35.1
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
34.9
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
34.9
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
34.7
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
34.7
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
34.6
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
34.4
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
34.3
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
34.2
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
33.9
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
33.9
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
33.7
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
33.5
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
33.4
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
33.2
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
33.1
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
33.0
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
32.7
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
32.6
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
32.0
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
31.8
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
31.6
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
31.5
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
31.5
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
31.4
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
31.3
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
31.2
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
30.9
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
30.9
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
30.8
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
30.8
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
30.6
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
30.6
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
30.4
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
29.7
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
29.5
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
29.5
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
29.4
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
29.4
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
29.3
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
29.2
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
29.0
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
28.8
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
28.6
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
28.3
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
28.2
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
28.1
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
27.6
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
27.5
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
27.5
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
27.5
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
27.1
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
27.0
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
26.1
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
25.7
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
25.7
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
25.7
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
25.5
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
25.5
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
25.3
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
25.1
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
24.5
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
24.2
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
24.1
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
23.9
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
23.7
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
23.5
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
23.5
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
23.0
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
22.8
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
22.5
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
22.2
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
22.0
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
21.8
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
21.0
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
20.1
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
19.5
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
18.9
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
18.0
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
16.9
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
16.5
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
16.4
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
15.3
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
14.6
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
14.1
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
14.1
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SYF2 is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
64.4
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
109.3
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
103.8
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
100.0
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
98.9
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
96.5
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
95.6
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
95.5
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
95.4
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
94.1
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
93.6
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
90.4
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
88.3
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
88.0
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
84.8
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
84.6
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
84.1
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
83.1
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
82.7
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
82.4
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
81.3
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
80.7
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
79.3
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
79.0
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
78.7
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
78.0
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
77.2
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
77.0
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
76.4
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
75.3
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
75.1
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
75.0
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
74.6
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
74.1
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
73.2
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
71.7
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
69.3
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
69.3
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
68.7
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
68.4
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
68.3
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
68.0
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
67.7
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
67.3
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
66.7
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
66.2
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
65.6
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
65.3
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
64.6
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
63.9
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
62.9
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
62.7
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
62.3
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
62.2
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
61.8
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
60.7
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
60.1
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
60.0
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
59.1
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
58.4
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
58.1
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
57.7
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
57.5
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
57.4
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
56.5
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
56.1
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
55.3
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
54.7
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
54.6
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
54.2
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
53.9
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
53.7
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
52.0
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
51.5
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
51.3
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
50.9
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
49.5
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
47.7
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
47.5
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
47.3
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
47.2
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
46.8
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
46.7
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
46.2
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
46.0
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
45.8
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
45.1
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
43.9
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
42.6
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
42.5
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
41.7
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
41.6
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
41.2
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
39.9
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
38.7
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
36.4
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
36.2
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
35.5
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
34.8
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
30.2
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SYF2 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
45.9
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
136.4
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
132.9
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
121.2
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
97.6
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
89.3
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
86.0
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
82.4
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
79.6
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
78.5
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
78.2
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
77.9
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
74.8
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
73.6
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
73.0
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
71.2
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
70.9
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
70.7
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
70.4
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
70.0
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
69.8
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
69.6
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
68.7
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
68.0
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
67.5
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
66.8
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
66.7
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
66.5
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
66.4
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
66.3
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
66.1
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
66.1
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
65.0
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
64.9
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
64.1
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
63.4
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
62.5
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
62.4
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
62.3
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
61.9
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
61.6
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
61.5
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
61.2
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
61.0
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
60.9
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
60.0
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
59.5
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
59.4
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
59.3
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
59.3
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
59.2
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
58.7
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
58.6
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
58.4
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
58.2
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
58.0
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
58.0
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
57.5
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
57.3
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
56.7
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
56.5
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
56.2
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
56.2
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
56.1
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
56.0
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
55.6
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
55.5
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
55.5
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
55.4
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
54.9
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
54.9
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
54.8
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
54.7
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
54.5
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
54.4
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
54.4
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
54.4
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
54.3
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
53.7
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
53.1
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
53.0
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
53.0
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
52.6
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
52.5
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
52.3
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
51.8
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
51.8
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
51.7
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
51.7
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
51.6
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
51.5
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
51.3
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
51.3
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
51.1
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
50.7
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
50.7
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
50.5
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
50.4
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
49.9
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
49.8
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
49.7
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
49.7
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
49.3
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
49.3
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
49.2
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
49.1
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
49.1
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
49.1
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
49.1
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
48.7
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
48.5
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
48.4
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
48.2
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
48.0
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
47.6
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
47.4
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
46.8
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
46.8
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
46.3
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
46.2
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
46.2
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
46.2
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
46.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
45.9
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
45.9
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
45.9
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
45.7
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
45.6
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
45.6
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
45.2
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
45.2
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
45.0
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
44.9
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
44.8
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
44.6
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
44.6
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
44.5
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
44.4
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
44.4
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
44.4
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
44.3
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
44.2
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
43.9
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
43.3
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
43.2
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
43.1
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
43.1
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
43.1
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
43.0
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
42.6
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
42.5
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
42.3
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
42.3
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
42.1
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
42.0
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
42.0
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
41.9
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
41.9
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
41.8
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
41.8
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
41.7
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
41.5
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
41.5
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
41.4
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
41.4
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
41.4
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
41.3
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
41.1
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
41.1
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
41.0
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
41.0
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
40.8
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
40.6
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
40.4
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
40.2
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
40.1
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
39.8
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
39.8
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
39.8
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
39.6
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
39.5
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
39.3
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
39.2
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
39.2
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
38.9
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
38.9
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
38.7
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
38.7
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
38.6
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
38.3
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
38.2
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
38.2
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
38.2
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
38.1
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
38.0
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
37.9
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
37.6
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
37.6
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
37.3
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
37.1
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
37.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
37.0
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
36.7
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
36.3
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
36.1
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
36.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
35.9
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
35.8
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
35.6
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
35.6
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
35.5
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
35.5
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
35.0
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
34.9
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
34.4
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
34.3
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
34.3
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
34.2
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
34.0
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
33.8
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
33.5
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
33.3
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
33.2
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
33.1
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
33.0
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
33.0
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
32.9
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
32.9
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
32.8
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
31.8
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
31.6
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
31.5
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
31.3
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
31.3
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
31.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
30.6
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
30.4
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
30.4
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
30.2
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
30.1
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
30.1
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
29.6
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
29.4
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
29.0
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
29.0
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
28.3
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
28.2
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
28.2
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
28.1
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
27.7
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
27.6
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
27.6
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
27.5
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
27.5
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
27.2
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
27.0
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
26.9
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
26.6
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
26.4
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
26.3
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
26.2
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
25.9
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
24.6
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
24.1
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
23.7
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
23.5
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
22.9
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
22.8
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
22.7
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
22.5
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
22.5
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
22.4
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
21.8
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
21.5
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
21.3
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
21.3
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
20.9
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
20.8
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
20.4
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
18.7
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
18.5
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
14.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
10.2
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0065930003
Tumor
0.8
CPT0077110003
Tumor
0.7
CPT0001340003
Tumor
0.7
CPT0006440003
Tumor
0.7
CPT0012180003
Tumor
0.7
CPT0015910003
Tumor
0.7
CPT0081880003
Tumor
0.5
CPT0092790003
Tumor
0.5
CPT0000640003
Tumor
0.5
CPT0065810003
Tumor
0.5
CPT0001500009
Tumor
0.5
CPT0014370004
Tumor
0.4
CPT0088550004
Tumor
0.4
CPT0017410003
Tumor
0.4
CPT0081600003
Tumor
0.4
CPT0069160003
Tumor
0.4
CPT0079510001
Normal
0.4
CPT0001270001
Normal
0.4
CPT0026410003
Tumor
0.3
CPT0092190003
Normal
0.3
CPT0079300001
Normal
0.3
CPT0012900004
Tumor
0.3
CPT0078990003
Tumor
0.3
CPT0017850003
Tumor
0.3
CPT0063320003
Tumor
0.3
CPT0065690003
Tumor
0.3
CPT0088630003
Tumor
0.3
CPT0012080003
Tumor
0.3
CPT0012640003
Normal
0.3
CPT0012550003
Tumor
0.2
CPT0000780007
Tumor
0.2
CPT0079180003
Tumor
0.2
CPT0001260009
Tumor
0.2
CPT0001540009
Tumor
0.2
CPT0006900003
Tumor
0.2
CPT0078530001
Normal
0.2
CPT0077310003
Tumor
0.2
CPT0025170003
Tumor
0.2
CPT0000870016
Tumor
0.2
CPT0075130003
Tumor
0.2
CPT0025290003
Tumor
0.2
CPT0065430003
Tumor
0.2
CPT0014130001
Normal
0.2
CPT0084590001
Normal
0.2
CPT0086870003
Tumor
0.2
CPT0010120001
Normal
0.2
CPT0010160003
Tumor
0.2
CPT0009000003
Tumor
0.1
CPT0088900003
Tumor
0.1
CPT0025060001
Normal
0.1
CPT0081990003
Tumor
0.1
CPT0077320001
Normal
0.1
CPT0086950003
Tumor
0.1
CPT0009020003
Normal
0.1
CPT0069010001
Normal
0.1
CPT0078830003
Tumor
0.1
CPT0063630003
Tumor
0.1
CPT0075170001
Normal
0.1
CPT0075720003
Tumor
0.1
CPT0066520001
Normal
0.1
CPT0001510001
Normal
0.1
CPT0092160003
Tumor
0.1
CPT0025350003
Tumor
0.1
CPT0069000003
Tumor
0.1
CPT0087040003
Tumor
0.1
CPT0009060003
Tumor
0.1
CPT0006630003
Tumor
0.1
CPT0085670003
Tumor
0.1
CPT0019160001
Normal
0.1
CPT0001550001
Normal
0.1
CPT0012920003
Normal
0.1
CPT0020130001
Normal
0.1
CPT0086360003
Tumor
0.1
CPT0086830003
Normal
0.1
CPT0071150004
Tumor
0.1
CPT0088970003
Tumor
0.1
CPT0014350001
Normal
0.1
CPT0079380003
Tumor
0.1
CPT0001230001
Normal
0.1
CPT0025580004
Tumor
0.1
CPT0007470001
Normal
0.1
CPT0017450001
Normal
0.1
CPT0079000001
Normal
0.1
CPT0014450004
Tumor
0.1
CPT0009080003
Normal
0.1
CPT0079270003
Tumor
0.1
CPT0076330003
Tumor
0.1
CPT0088480003
Tumor
0.0
CPT0086820003
Tumor
0.0
CPT0088640003
Normal
0.0
CPT0021240003
Tumor
0.0
CPT0007870001
Normal
0.0
CPT0092310003
Normal
0.0
CPT0092800003
Normal
0.0
CPT0006530001
Normal
0.0
CPT0012280003
Tumor
0.0
CPT0077490003
Tumor
0.0
CPT0079410003
Tumor
0.0
CPT0014470001
Normal
0.0
CPT0012670003
Tumor
0.0
CPT0088570001
Normal
0.0
CPT0088690003
Tumor
0.0
CPT0020020001
Normal
0.0
CPT0000660001
Normal
0.0
CPT0012290003
Normal
0.0
CPT0001180009
Tumor
0.0
CPT0018250001
Normal
0.0
CPT0086370003
Normal
0.0
CPT0012090003
Normal
0.0
CPT0065870003
Tumor
0.0
CPT0000890001
Normal
0.0
CPT0010110003
Tumor
0.0
CPT0078930003
Tumor
0.0
CPT0076350001
Normal
0.0
CPT0069190001
Normal
-0.1
CPT0089460004
Tumor
-0.1
CPT0025110003
Tumor
-0.1
CPT0023350003
Tumor
-0.1
CPT0019130003
Tumor
-0.1
CPT0024670003
Tumor
-0.1
CPT0001190001
Normal
-0.1
CPT0002350011
Tumor
-0.1
CPT0065820001
Normal
-0.1
CPT0066480003
Tumor
-0.1
CPT0078940001
Normal
-0.1
CPT0084560003
Tumor
-0.1
CPT0026420001
Normal
-0.1
CPT0088500001
Normal
-0.1
CPT0001220008
Tumor
-0.1
CPT0007860003
Tumor
-0.1
CPT0089040001
Normal
-0.1
CPT0089480003
Normal
-0.1
CPT0002370001
Normal
-0.1
CPT0077140001
Normal
-0.1
CPT0079230003
Tumor
-0.1
CPT0086970003
Normal
-0.1
CPT0088920001
Normal
-0.1
CPT0088760003
Tumor
-0.1
CPT0006730001
Normal
-0.1
CPT0025610001
Normal
-0.1
CPT0011410003
Tumor
-0.1
CPT0078800003
Tumor
-0.1
CPT0078660003
Tumor
-0.1
CPT0001350001
Normal
-0.1
CPT0025920001
Normal
-0.1
CPT0092730003
Tumor
-0.1
CPT0063330001
Normal
-0.2
CPT0064400001
Normal
-0.2
CPT0063640001
Normal
-0.2
CPT0010170001
Normal
-0.2
CPT0020120003
Tumor
-0.2
CPT0023690003
Tumor
-0.2
CPT0014160003
Tumor
-0.2
CPT0064370003
Tumor
-0.2
CPT0088710001
Normal
-0.2
CPT0092740003
Normal
-0.2
CPT0081620001
Normal
-0.2
CPT0089020003
Tumor
-0.2
CPT0025880003
Tumor
-0.2
CPT0078670001
Normal
-0.2
CPT0025230003
Tumor
-0.2
CPT0066430001
Normal
-0.2
CPT0086890003
Normal
-0.2
CPT0078510003
Tumor
-0.2
CPT0025050003
Tumor
-0.2
CPT0079430001
Normal
-0.2
CPT0000790001
Normal
-0.2
CPT0019990003
Tumor
-0.2
CPT0015810003
Tumor
-0.2
CPT0079480003
Tumor
-0.2
CPT0092290003
Tumor
-0.3
CPT0066470004
Tumor
-0.3
CPT0023360001
Normal
-0.3
CPT0065450001
Normal
-0.3
CPT0088780001
Normal
-0.3
CPT0075570001
Normal
-0.3
CPT0087050003
Normal
-0.3
CPT0078840001
Normal
-0.3
CPT0082010001
Normal
-0.3
CPT0075560003
Tumor
-0.4
CPT0086030003
Tumor
-0.4
CPT0023710001
Normal
-0.4
CPT0077500001
Normal
-0.4
CPT0011240003
Tumor
-0.4
CPT0006950001
Normal
-0.4
CPT0065750003
Tumor
-0.4
CPT0002270011
Tumor
-0.5
CPT0015730003
Tumor
-0.5
CPT0024680001
Normal
-0.5
CPT0012370003
Tumor
-0.5
CPT0013790003
Normal
-0.7
CPT0012570003
Normal
-0.8
CPT0012770003
Normal
-0.8
CPT0007320003
Tumor
-0.8
Show allShow less
RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
