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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
DPH5 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
8.6
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
49.7
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
19.7
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
19.1
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
19.1
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
18.8
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
18.5
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
14.6
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
14.6
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
13.7
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
13.5
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
12.9
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
12.7
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
12.6
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
11.9
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
11.1
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
11.0
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
10.4
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
10.0
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
9.8
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
9.4
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
9.3
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
9.3
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
9.2
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
9.1
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
9.0
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
8.8
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
8.8
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
8.7
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
8.2
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
8.1
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
7.9
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
7.8
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
7.4
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
7.2
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
7.1
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
6.9
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
6.9
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
6.8
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
6.8
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
6.7
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
6.7
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
6.7
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
6.6
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
6.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
5.8
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
5.5
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
5.2
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
5.2
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
5.0
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
5.0
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
4.9
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
4.7
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
4.7
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
3.6
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
2.8
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
2.4
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
0.5
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
0.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
0.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
0.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
0.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
0.0
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
0.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
DPH5 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
17.7
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
51.1
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
45.5
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
37.5
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
37.2
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
36.2
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
36.1
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
36.0
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
35.0
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
34.4
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
34.2
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
33.5
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
33.4
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
32.8
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
32.7
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
32.5
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
30.8
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
30.7
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
30.6
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
30.4
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
30.3
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
30.1
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
29.5
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
29.1
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
29.1
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
28.7
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
28.7
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
28.5
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
28.2
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
28.1
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
28.1
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
28.0
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
27.9
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
27.7
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
27.6
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
27.3
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
27.1
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
26.9
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
26.8
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
26.7
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
26.6
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
26.3
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
26.2
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
26.1
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
26.1
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
25.7
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
25.5
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
25.4
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
25.4
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
25.4
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
25.3
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
25.2
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
25.2
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
25.1
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
25.1
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
25.0
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
24.9
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
24.7
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
24.6
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
24.6
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
24.6
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
24.5
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
24.3
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
24.3
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
24.2
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
24.2
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
24.1
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
24.1
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
23.9
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
23.9
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
23.8
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
23.7
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
23.7
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
23.6
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
23.6
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
23.6
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
23.6
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
23.5
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
23.4
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
23.2
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
23.2
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
23.2
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
23.2
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
23.2
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
23.2
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
23.2
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
23.0
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
23.0
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
23.0
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
22.9
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
22.9
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
22.8
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
22.8
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
22.7
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
22.7
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
22.6
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
22.6
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
22.5
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
22.5
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
22.5
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
22.4
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
22.4
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
22.3
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
22.3
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
22.3
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
22.1
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
22.1
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
22.0
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
22.0
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
21.9
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
21.9
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
21.9
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
21.8
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
21.8
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
21.8
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
21.8
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
21.7
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
21.6
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
21.6
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
21.6
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
21.5
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
21.5
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
21.4
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
21.4
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
21.4
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
21.3
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
21.3
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
21.0
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
21.0
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
21.0
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
21.0
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
21.0
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
21.0
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
20.9
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
20.7
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
20.7
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
20.7
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
20.6
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
20.6
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
20.6
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
20.6
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
20.6
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
20.6
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
20.6
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
20.5
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
20.4
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
20.4
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
20.4
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
20.3
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
20.3
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
20.3
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
20.2
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
20.1
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
20.1
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
20.0
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
20.0
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
19.9
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
19.9
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
19.9
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
19.9
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
19.9
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
19.8
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
19.8
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
19.8
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
19.7
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
19.7
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
19.7
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
19.7
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
19.6
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
19.6
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
19.6
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
19.6
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
19.6
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
19.6
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
19.6
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
19.6
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
19.5
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
19.5
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
19.5
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
19.5
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
19.4
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
19.4
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
19.4
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
19.4
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
19.3
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
19.3
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
19.2
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
19.1
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
19.1
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
19.1
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
19.1
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
19.0
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
19.0
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
19.0
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
18.9
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
18.9
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
18.9
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
18.9
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
18.9
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
18.9
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
18.8
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
18.8
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
18.7
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
18.7
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
18.7
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
18.7
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
18.7
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
18.7
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
18.6
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
18.6
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
18.6
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
18.6
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
18.5
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
18.5
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
18.5
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
18.5
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
18.4
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
18.3
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
18.3
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
18.3
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
18.3
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
18.2
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
18.2
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
18.2
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
18.1
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
18.0
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
18.0
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
18.0
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
18.0
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
18.0
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
17.9
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
17.9
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
17.9
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
17.7
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
17.7
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
17.7
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
17.7
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
17.6
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
17.6
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
17.6
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
17.5
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
17.5
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
17.5
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
17.5
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
17.5
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
17.5
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
17.5
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
17.4
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
17.4
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
17.4
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
17.4
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
17.3
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
17.3
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
17.3
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
17.3
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
17.3
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
17.3
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
17.3
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
17.3
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
17.2
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
17.2
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
17.2
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
17.2
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
17.1
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
17.1
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
17.0
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
17.0
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
17.0
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
17.0
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
16.9
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
16.9
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
16.9
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
16.9
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
16.9
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
16.8
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
16.7
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
16.7
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
16.7
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
16.7
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
16.7
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
16.7
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
16.6
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
16.6
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
16.6
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
16.5
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
16.5
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
16.5
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
16.5
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
16.5
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
16.4
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
16.4
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
16.4
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
16.4
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
16.4
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
16.3
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
16.3
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
16.3
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
16.2
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
16.2
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
16.2
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
16.2
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
16.2
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
16.2
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
16.1
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
16.1
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
16.1
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
16.1
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
16.1
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
16.1
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
16.0
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
16.0
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
16.0
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
16.0
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
16.0
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
15.9
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
15.9
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
15.9
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
15.8
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
15.8
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
15.8
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
15.7
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
15.7
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
15.7
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
15.7
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
15.6
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
15.5
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
15.5
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
15.5
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
15.5
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
15.5
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
15.5
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
15.4
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
15.4
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
15.4
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
15.3
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
15.3
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
15.3
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
15.3
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
15.3
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
15.3
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
15.2
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
15.2
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
15.2
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
15.2
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
15.2
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
15.1
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
15.1
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
15.1
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
15.0
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
15.0
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
15.0
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
14.9
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
14.8
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
14.8
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
14.8
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
14.8
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
14.7
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
14.7
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
14.7
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
14.6
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
14.6
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
14.6
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
14.5
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
14.5
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
14.5
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
14.5
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
14.4
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
14.4
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
14.4
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
14.3
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
14.2
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
14.2
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
14.2
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
14.2
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
14.2
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
14.2
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
14.1
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
14.1
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
14.1
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
14.1
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
14.1
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
14.1
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
14.1
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
14.0
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
14.0
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
13.9
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
13.9
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
13.9
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
13.8
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
13.8
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
13.8
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
13.8
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
13.8
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
13.7
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
13.7
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
13.7
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
13.7
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
13.7
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
13.6
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
13.5
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
13.5
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
13.5
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
13.4
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
13.3
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
13.3
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
13.3
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
13.3
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
13.3
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
13.2
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
13.2
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
13.2
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
13.1
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
13.1
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
13.0
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
13.0
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
12.9
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
12.8
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
12.6
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
12.6
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
12.6
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
12.6
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
12.5
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
12.5
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
12.5
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
12.5
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
12.5
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
12.4
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
12.4
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
12.4
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
12.4
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
12.2
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
12.2
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
12.2
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
12.1
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
12.0
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
12.0
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
12.0
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
11.9
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
11.9
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
11.8
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
11.6
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
11.6
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
11.6
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
11.5
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
11.5
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
11.5
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
11.4
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
11.4
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
11.4
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
11.4
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
11.2
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
11.1
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
11.1
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
11.1
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
11.1
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
11.1
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
11.0
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
10.9
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
10.9
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
10.9
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
10.7
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
10.6
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
10.6
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
10.5
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
10.5
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
10.5
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
10.5
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
10.4
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
10.4
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
10.4
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
10.4
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
10.3
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
10.3
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
10.2
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
10.1
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
10.1
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
10.0
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
9.8
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
9.8
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
9.8
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
9.8
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
9.8
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
9.7
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
9.6
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
9.6
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
9.4
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
9.4
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
9.3
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
9.3
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
9.2
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
9.2
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
9.1
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
9.0
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
9.0
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
9.0
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
9.0
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
8.9
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
8.9
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
8.8
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
8.8
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
8.7
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
8.6
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
8.5
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
8.4
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
8.4
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
8.3
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
8.2
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
8.2
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
8.2
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
7.7
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
7.6
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
7.4
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
6.9
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
6.8
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
6.6
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
6.4
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
6.2
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
5.8
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
5.7
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
5.6
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
5.6
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
DPH5 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
15.9
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
32.9
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
27.4
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
26.3
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
25.8
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
25.4
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
25.2
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
23.9
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
23.5
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
23.4
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
23.3
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
23.1
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
23.0
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
22.8
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
21.9
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
21.9
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
21.2
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
20.4
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
20.4
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
20.1
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
19.9
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
19.2
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
19.0
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
18.6
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
18.6
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
18.4
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
17.5
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
17.5
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
17.5
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
17.5
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
17.2
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
17.1
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
17.0
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
17.0
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
17.0
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
16.8
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
16.6
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
16.5
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
16.5
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
16.5
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
16.4
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
16.1
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
16.1
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
16.0
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
16.0
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
15.9
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
15.9
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
15.8
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
15.3
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
15.0
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
15.0
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
14.9
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
14.8
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
14.8
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
14.8
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
14.7
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
14.6
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
14.5
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
14.3
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
14.1
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
14.0
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
13.9
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
13.8
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
13.7
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
13.7
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
13.7
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
13.6
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
13.6
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
13.6
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
13.4
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
13.3
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
13.2
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
13.2
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
13.2
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
12.9
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
12.8
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
12.8
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
12.8
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
12.8
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
12.6
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
12.2
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
12.1
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
12.0
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
11.8
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
11.7
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
11.5
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
11.1
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
11.0
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
10.9
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
10.7
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
10.7
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
10.6
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
10.6
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
10.3
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
10.2
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
9.6
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
9.1
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
8.7
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
8.0
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
7.6
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
DPH5 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
16.6
Number of samples
282
Samples
Sample
Description
TPM
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
57.6
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
47.0
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
47.0
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
45.5
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
36.3
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
34.7
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
34.4
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
33.9
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
33.6
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
33.4
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
32.5
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
31.4
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
31.1
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
31.0
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
30.9
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
30.4
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
30.1
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
29.3
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
28.5
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
28.3
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
28.0
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
27.8
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
27.6
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
27.5
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
27.3
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
27.3
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
27.0
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
26.8
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
26.7
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
26.4
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
26.3
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
26.0
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
25.7
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
25.4
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
25.2
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
25.0
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
24.9
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
24.9
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
24.9
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
24.7
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
24.6
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
24.5
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
24.5
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
24.1
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
23.9
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
23.6
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
23.5
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
23.5
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
23.4
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
23.4
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
23.3
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
23.2
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
23.2
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
23.1
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
22.8
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
22.7
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
22.6
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
22.5
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
22.4
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
22.4
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
22.3
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
22.3
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
22.3
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
22.1
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
22.0
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
22.0
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
21.9
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
21.9
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
21.8
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
21.8
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
21.6
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
21.4
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
21.3
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
21.2
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
20.8
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
20.7
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
20.6
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
20.6
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
20.5
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
20.5
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
20.5
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
20.4
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
20.4
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
20.1
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
20.1
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
20.1
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
19.9
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
19.9
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
19.7
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
19.7
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
19.6
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
19.5
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
19.4
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
19.3
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
19.3
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
19.3
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
19.3
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
19.1
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
19.1
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
19.1
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
19.0
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
19.0
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
18.8
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
18.7
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
18.7
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
18.7
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
18.7
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
18.6
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
18.5
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
18.5
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
18.4
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
18.4
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
18.3
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
18.3
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
18.2
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
18.2
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
18.1
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
18.1
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
18.1
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
18.1
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
18.0
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
18.0
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
17.9
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
17.8
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
17.8
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
17.7
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
17.7
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
17.7
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
17.7
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
17.6
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
17.5
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
17.4
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
17.4
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
17.4
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
17.4
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
17.4
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
17.4
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
17.0
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
16.9
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
16.9
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
16.8
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
16.7
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
16.7
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
16.6
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
16.6
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
16.6
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
16.6
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
16.5
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
16.5
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
16.4
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
16.4
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
16.3
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
16.2
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
16.2
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
16.0
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
16.0
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
15.9
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
15.9
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
15.9
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
15.8
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
15.8
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
15.7
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
15.7
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
15.6
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
15.6
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
15.6
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
15.6
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
15.6
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
15.6
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
15.5
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
15.5
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
15.5
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
15.5
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
15.5
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
15.4
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
15.3
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
15.3
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
15.2
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
15.2
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
15.2
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
15.2
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
15.2
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
15.1
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
15.1
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
15.1
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
14.9
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
14.9
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
14.8
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
14.7
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
14.6
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
14.6
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
14.5
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
14.4
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
14.3
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
14.2
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
14.1
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
14.1
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
13.8
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
13.7
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
13.6
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
13.5
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
13.4
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
13.4
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
13.3
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
13.2
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
13.2
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
13.2
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
13.0
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
13.0
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
12.9
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
12.6
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
12.6
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
12.5
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
12.2
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
12.2
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
11.9
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
11.8
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
11.8
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
11.8
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
11.8
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
11.7
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
11.7
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
11.2
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
11.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
10.8
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
10.7
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
10.6
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
10.5
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
10.3
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
10.3
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
10.0
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
10.0
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
9.7
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
9.7
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
9.4
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
9.1
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
8.9
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
8.6
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
8.5
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
8.4
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
8.4
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
7.6
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
7.1
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
7.1
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
6.9
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
6.8
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
6.5
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
5.7
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
4.8
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
4.8
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
4.7
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
4.2
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
4.2
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
3.1
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
2.4
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
0.7
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
0.5
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
0.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
0.0
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
0.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
0.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
0.0
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
0.0
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
0.0
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
0.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
0.0
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
0.0
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
0.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
0.0
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
0.0
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
0.0
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
0.0
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
0.0
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
0.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
0.0
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
0.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
0.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
0.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
0.0
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
0.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
0.0
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0001340003
Tumor
1.1
CPT0078510003
Tumor
0.9
CPT0009060003
Tumor
0.7
CPT0012550003
Tumor
0.5
CPT0021240003
Tumor
0.5
CPT0092790003
Tumor
0.5
CPT0088970003
Tumor
0.5
CPT0075130003
Tumor
0.4
CPT0066470004
Tumor
0.4
CPT0011410003
Tumor
0.4
CPT0064370003
Tumor
0.4
CPT0012670003
Tumor
0.4
CPT0065750003
Tumor
0.4
CPT0078930003
Tumor
0.4
CPT0001500009
Tumor
0.4
CPT0025880003
Tumor
0.4
CPT0002270011
Tumor
0.4
CPT0086030003
Tumor
0.3
CPT0012280003
Tumor
0.3
CPT0078830003
Tumor
0.3
CPT0025050003
Tumor
0.3
CPT0006630003
Tumor
0.3
CPT0078800003
Tumor
0.3
CPT0085670003
Tumor
0.3
CPT0007860003
Tumor
0.3
CPT0066480003
Tumor
0.3
CPT0012180003
Tumor
0.2
CPT0079410003
Tumor
0.2
CPT0015730003
Tumor
0.2
CPT0092310003
Normal
0.2
CPT0086820003
Tumor
0.2
CPT0012900004
Tumor
0.2
CPT0001230001
Normal
0.2
CPT0009020003
Normal
0.2
CPT0089460004
Tumor
0.2
CPT0002370001
Normal
0.2
CPT0081990003
Tumor
0.2
CPT0079380003
Tumor
0.2
CPT0006900003
Tumor
0.2
CPT0088900003
Tumor
0.2
CPT0002350011
Tumor
0.2
CPT0078940001
Normal
0.2
CPT0015910003
Tumor
0.2
CPT0020120003
Tumor
0.2
CPT0077310003
Tumor
0.2
CPT0014160003
Tumor
0.2
CPT0089020003
Tumor
0.1
CPT0009000003
Tumor
0.1
CPT0015810003
Tumor
0.1
CPT0009080003
Normal
0.1
CPT0087050003
Normal
0.1
CPT0019990003
Tumor
0.1
CPT0069000003
Tumor
0.1
CPT0023360001
Normal
0.1
CPT0071150004
Tumor
0.1
CPT0024670003
Tumor
0.1
CPT0019130003
Tumor
0.1
CPT0019160001
Normal
0.1
CPT0069010001
Normal
0.1
CPT0081880003
Tumor
0.1
CPT0007320003
Tumor
0.1
CPT0025060001
Normal
0.1
CPT0079000001
Normal
0.1
CPT0088640003
Normal
0.1
CPT0023710001
Normal
0.1
CPT0023690003
Tumor
0.1
CPT0001180009
Tumor
0.1
CPT0079230003
Tumor
0.1
CPT0014130001
Normal
0.1
CPT0086360003
Tumor
0.1
CPT0063640001
Normal
0.1
CPT0078530001
Normal
0.1
CPT0014370004
Tumor
0.1
CPT0025580004
Tumor
0.1
CPT0000780007
Tumor
0.1
CPT0025610001
Normal
0.1
CPT0064400001
Normal
0.0
CPT0017410003
Tumor
0.0
CPT0063320003
Tumor
0.0
CPT0012370003
Tumor
0.0
CPT0006730001
Normal
0.0
CPT0088480003
Tumor
0.0
CPT0079430001
Normal
0.0
CPT0088500001
Normal
0.0
CPT0010120001
Normal
0.0
CPT0075560003
Tumor
0.0
CPT0092290003
Tumor
0.0
CPT0088710001
Normal
0.0
CPT0020130001
Normal
0.0
CPT0079510001
Normal
0.0
CPT0075570001
Normal
0.0
CPT0089480003
Normal
0.0
CPT0069160003
Tumor
0.0
CPT0077110003
Tumor
0.0
CPT0001260009
Tumor
0.0
CPT0078670001
Normal
0.0
CPT0024680001
Normal
0.0
CPT0077140001
Normal
0.0
CPT0023350003
Tumor
0.0
CPT0007870001
Normal
0.0
CPT0081620001
Normal
0.0
CPT0006950001
Normal
0.0
CPT0065930003
Tumor
0.0
CPT0010170001
Normal
0.0
CPT0025920001
Normal
0.0
CPT0078840001
Normal
0.0
CPT0077490003
Tumor
0.0
CPT0017450001
Normal
0.0
CPT0010160003
Tumor
0.0
CPT0087040003
Tumor
0.0
CPT0014350001
Normal
0.0
CPT0079300001
Normal
0.0
CPT0086830003
Normal
0.0
CPT0086370003
Normal
0.0
CPT0088690003
Tumor
0.0
CPT0076350001
Normal
0.0
CPT0001510001
Normal
0.0
CPT0001550001
Normal
0.0
CPT0081600003
Tumor
-0.1
CPT0088780001
Normal
-0.1
CPT0065810003
Tumor
-0.1
CPT0092740003
Normal
-0.1
CPT0012770003
Normal
-0.1
CPT0007470001
Normal
-0.1
CPT0020020001
Normal
-0.1
CPT0001270001
Normal
-0.1
CPT0000660001
Normal
-0.1
CPT0012080003
Tumor
-0.1
CPT0000890001
Normal
-0.1
CPT0026420001
Normal
-0.1
CPT0001350001
Normal
-0.1
CPT0077320001
Normal
-0.1
CPT0077500001
Normal
-0.1
CPT0089040001
Normal
-0.1
CPT0065430003
Tumor
-0.1
CPT0001220008
Tumor
-0.1
CPT0011240003
Tumor
-0.1
CPT0086970003
Normal
-0.1
CPT0065870003
Tumor
-0.1
CPT0092160003
Tumor
-0.1
CPT0078660003
Tumor
-0.1
CPT0066430001
Normal
-0.1
CPT0065450001
Normal
-0.1
CPT0084590001
Normal
-0.1
CPT0006440003
Tumor
-0.1
CPT0092800003
Normal
-0.1
CPT0013790003
Normal
-0.1
CPT0088760003
Tumor
-0.1
CPT0010110003
Tumor
-0.1
CPT0000790001
Normal
-0.1
CPT0025230003
Tumor
-0.1
CPT0063330001
Normal
-0.1
CPT0063630003
Tumor
-0.1
CPT0000870016
Tumor
-0.1
CPT0026410003
Tumor
-0.2
CPT0001540009
Tumor
-0.2
CPT0075720003
Tumor
-0.2
CPT0012570003
Normal
-0.2
CPT0079480003
Tumor
-0.2
CPT0086950003
Tumor
-0.2
CPT0066520001
Normal
-0.2
CPT0086870003
Tumor
-0.2
CPT0014470001
Normal
-0.2
CPT0075170001
Normal
-0.2
CPT0086890003
Normal
-0.2
CPT0025170003
Tumor
-0.2
CPT0079270003
Tumor
-0.2
CPT0025110003
Tumor
-0.2
CPT0092730003
Tumor
-0.2
CPT0025290003
Tumor
-0.2
CPT0012920003
Normal
-0.2
CPT0065820001
Normal
-0.2
CPT0088550004
Tumor
-0.2
CPT0012090003
Normal
-0.3
CPT0092190003
Normal
-0.3
CPT0025350003
Tumor
-0.3
CPT0088920001
Normal
-0.3
CPT0088630003
Tumor
-0.3
CPT0084560003
Tumor
-0.3
CPT0018250001
Normal
-0.3
CPT0082010001
Normal
-0.3
CPT0000640003
Tumor
-0.3
CPT0078990003
Tumor
-0.3
CPT0006530001
Normal
-0.3
CPT0012640003
Normal
-0.3
CPT0014450004
Tumor
-0.3
CPT0001190001
Normal
-0.3
CPT0079180003
Tumor
-0.4
CPT0069190001
Normal
-0.4
CPT0065690003
Tumor
-0.4
CPT0076330003
Tumor
-0.5
CPT0017850003
Tumor
-0.5
CPT0088570001
Normal
-0.5
CPT0012290003
Normal
-0.7
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
