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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NID1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
14.1
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
68.9
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
43.7
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
43.3
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
42.0
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
34.3
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
28.6
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
26.1
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
25.9
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
25.6
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
24.5
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
23.9
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
20.4
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
20.3
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
19.4
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
19.3
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
18.9
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
17.4
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
16.9
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
16.5
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
16.1
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
15.9
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
15.6
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
15.5
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
15.5
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
14.3
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
14.2
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
12.9
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
12.8
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
12.8
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
12.0
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
11.9
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
11.5
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
10.8
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
10.4
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
10.4
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
9.3
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
9.3
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
8.3
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
8.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
7.9
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
7.5
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
7.5
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
7.2
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
6.9
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
6.8
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
6.8
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
6.7
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
6.3
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
5.6
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
5.3
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
5.2
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
4.7
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
4.7
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
4.6
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
4.2
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
4.0
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
3.7
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
3.4
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
2.9
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
2.7
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
2.0
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
1.6
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
1.2
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NID1 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
53.7
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
417.9
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
258.8
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
228.3
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
181.8
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
174.1
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
173.3
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
165.1
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
163.5
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
162.0
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
160.7
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
159.2
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
149.6
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
145.0
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
139.7
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
139.0
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
138.6
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
138.3
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
138.1
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
134.8
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
126.7
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
126.7
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
126.3
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
124.6
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
124.3
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
121.5
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
120.1
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
119.2
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
117.9
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
117.0
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
116.4
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
115.9
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
114.6
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
114.4
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
114.3
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
113.2
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
110.2
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
108.9
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
108.2
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
108.0
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
107.2
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
107.1
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
104.8
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
103.8
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
103.5
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
103.4
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
100.1
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
98.5
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
98.2
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
98.2
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
97.3
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
97.3
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
97.1
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
97.0
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
96.6
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
95.5
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
94.7
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
94.7
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
94.6
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
94.0
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
93.8
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
93.0
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
92.1
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
91.6
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
91.1
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
91.0
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
90.8
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
90.5
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
90.3
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
90.1
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
90.1
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
89.6
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
89.3
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
89.2
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
89.1
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
89.0
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
88.7
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
87.8
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
86.0
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
85.8
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
85.7
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
85.4
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
85.3
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
85.3
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
84.8
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
83.9
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
83.6
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
83.4
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
83.2
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
83.1
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
82.9
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
82.0
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
80.7
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
80.4
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
80.3
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
79.7
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
79.3
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
78.6
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
78.5
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
78.2
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
78.1
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
77.9
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
77.9
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
77.7
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
77.6
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
77.5
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
76.6
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
76.3
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
76.0
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
75.9
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
75.5
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
74.8
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
74.6
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
73.6
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
73.6
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
73.5
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
73.3
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
73.2
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
73.0
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
73.0
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
72.7
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
72.6
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
72.4
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
72.0
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
71.5
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
71.4
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
71.1
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
71.0
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
70.7
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
70.7
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
70.6
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
70.4
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
70.2
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
69.5
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
69.1
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
69.0
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
68.9
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
68.6
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
68.2
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
67.9
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
67.9
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
67.4
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
67.1
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
66.8
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
66.3
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
66.2
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
66.0
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
65.8
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
65.2
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
65.2
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
64.8
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
64.8
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
64.6
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
64.6
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
64.5
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
64.3
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
64.2
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
63.9
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
63.8
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
63.8
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
63.8
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
63.3
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
63.2
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
63.0
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
63.0
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
62.9
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
62.9
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
62.3
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
62.1
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
61.7
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
61.6
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
61.6
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
61.2
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
61.1
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
61.0
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
60.6
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
60.6
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
60.5
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
60.5
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
60.5
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
60.4
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
60.2
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
59.9
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
59.9
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
59.5
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
59.5
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
59.2
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
59.2
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
59.0
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
59.0
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
58.9
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
58.9
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
58.6
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
58.3
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
58.1
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
57.9
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
57.7
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
57.7
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
57.5
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
57.1
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
57.1
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
57.0
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
56.7
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
56.6
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
56.5
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
56.2
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
56.0
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
55.6
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
55.4
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
55.0
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
54.9
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
54.9
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
54.9
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
54.5
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
54.5
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
54.2
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
54.1
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
54.0
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
54.0
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
54.0
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
53.9
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
53.8
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
53.8
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
53.6
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
53.6
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
53.5
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
53.4
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
53.1
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
53.0
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
52.9
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
52.7
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
52.2
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
52.0
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
52.0
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
51.9
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
51.9
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
51.2
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
51.1
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
50.5
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
50.5
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
50.3
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
50.1
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
49.8
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
49.8
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
49.8
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
49.6
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
49.5
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
49.5
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
49.5
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
49.4
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
49.0
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
49.0
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
49.0
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
48.9
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
48.7
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
48.0
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
47.9
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
47.9
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
47.7
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
47.6
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
47.6
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
47.5
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
47.4
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
47.2
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
47.1
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
47.0
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
46.8
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
46.6
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
46.5
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
46.5
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
46.3
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
46.3
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
46.0
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
46.0
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
45.9
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
45.8
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
45.7
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
45.6
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
45.5
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
45.3
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
45.1
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
45.0
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
44.9
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
44.7
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
44.3
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
44.0
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
43.9
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
43.7
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
43.4
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
43.3
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
43.2
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
43.2
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
43.1
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
43.0
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
42.9
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
42.8
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
42.7
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
42.4
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
42.1
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
41.7
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
41.6
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
41.6
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
41.4
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
41.3
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
41.2
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
41.1
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
41.1
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
40.6
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
40.5
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
40.5
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
40.2
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
40.0
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
40.0
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
39.9
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
39.8
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
39.4
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
39.2
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
39.0
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
38.4
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
38.3
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
38.3
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
38.3
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
38.2
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
38.2
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
37.8
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
37.7
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
37.7
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
37.5
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
37.0
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
37.0
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
36.7
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
36.7
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
36.6
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
36.6
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
36.4
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
36.2
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
36.0
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
35.9
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
35.9
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
35.9
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
35.8
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
35.6
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
35.5
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
35.5
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
35.2
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
35.1
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
34.5
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
34.2
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
34.2
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
34.1
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
34.0
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
33.8
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
33.8
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
33.7
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
33.4
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
32.9
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
32.3
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
32.3
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
32.1
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
31.9
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
31.9
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
31.7
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
31.3
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
31.2
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
31.1
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
31.0
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
31.0
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
30.8
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
30.7
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
30.6
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
30.4
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
30.3
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
30.0
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
29.7
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
29.7
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
29.6
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
29.4
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
29.4
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
29.3
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
29.2
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
29.1
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
28.9
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
28.8
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
28.7
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
28.5
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
28.5
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
28.4
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
28.2
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
28.1
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
28.0
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
27.8
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
27.6
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
27.3
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
27.2
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
27.0
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
27.0
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
26.9
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
26.6
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
26.5
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
26.5
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
26.5
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
26.5
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
26.2
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
26.2
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
26.0
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
25.8
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
25.7
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
25.6
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
25.4
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
25.1
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
25.1
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
24.8
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
23.8
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
23.5
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
23.4
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
23.2
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
23.2
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
22.9
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
22.8
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
22.7
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
22.6
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
22.6
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
22.3
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
22.3
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
22.2
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
21.9
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
21.4
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
21.4
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
21.2
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
21.1
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
21.1
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
21.0
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
21.0
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
20.7
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
20.7
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
20.6
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
20.6
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
20.4
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
20.0
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
20.0
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
20.0
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
19.7
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
19.3
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
19.2
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
19.2
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
18.7
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
18.4
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
18.3
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
18.1
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
18.1
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
18.1
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
17.8
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
17.7
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
17.5
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
16.7
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
16.7
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
16.4
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
16.3
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
16.3
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
16.3
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
16.3
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
16.2
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
16.0
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
16.0
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
15.9
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
15.9
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
15.7
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
15.6
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
15.3
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
14.7
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
14.7
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
14.7
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
14.3
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
14.3
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
14.1
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
14.1
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
13.9
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
13.5
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
13.5
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
13.4
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
13.2
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
13.1
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
12.9
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
12.0
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
12.0
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
11.8
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
11.4
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
10.6
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
10.3
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
10.3
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
10.2
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
10.1
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
9.9
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
9.9
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
9.8
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
9.7
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
9.3
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
9.1
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
9.0
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
8.9
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
8.7
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
8.6
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
8.3
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
8.2
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
8.1
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
7.8
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
6.6
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
6.5
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
6.0
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
5.7
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
5.6
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
5.6
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
4.9
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
4.6
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
4.1
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
4.0
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
3.9
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
3.0
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
2.9
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
1.7
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
1.3
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NID1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
50.3
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
227.1
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
135.9
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
120.3
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
116.4
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
91.3
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
90.5
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
88.8
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
88.0
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
88.0
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
86.6
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
81.8
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
81.3
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
79.8
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
79.5
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
79.2
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
78.5
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
75.6
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
73.6
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
73.4
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
72.9
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
69.8
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
68.8
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
68.7
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
65.7
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
65.2
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
65.0
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
64.2
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
63.0
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
59.6
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
57.2
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
57.1
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
56.6
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
56.5
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
56.4
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
56.2
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
56.1
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
54.8
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
54.2
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
52.9
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
52.6
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
52.3
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
52.0
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
51.5
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
50.3
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
50.0
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
49.3
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
49.2
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
48.1
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
47.9
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
47.4
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
46.0
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
44.9
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
44.1
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
43.9
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
42.8
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
41.8
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
41.8
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
41.0
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
40.3
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
40.2
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
40.0
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
38.9
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
38.4
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
37.9
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
36.8
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
35.9
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
35.8
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
35.8
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
35.7
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
35.1
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
34.8
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
31.7
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
31.6
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
31.3
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
29.7
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
29.4
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
28.5
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
28.3
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
28.3
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
27.0
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
26.2
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
26.0
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
25.4
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
25.3
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
22.0
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
21.1
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
20.7
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
20.0
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
17.0
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
16.7
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
16.0
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
15.8
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
14.8
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
14.6
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
13.4
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
8.9
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
8.1
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
7.2
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
4.7
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NID1 is potential prognostic, high expression is unfavorable in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
9.8
Number of samples
282
Samples
Sample
Description
TPM
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
61.4
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
45.0
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
44.6
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
42.6
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
41.1
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
38.3
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
38.0
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
35.9
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
33.5
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
33.4
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
32.5
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
31.8
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
29.9
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
28.7
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
27.7
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
27.3
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
26.9
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
26.6
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
25.6
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
25.3
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
25.2
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
25.0
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
24.8
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
24.5
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
24.4
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
24.3
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
22.8
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
22.0
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
21.6
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
21.6
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
21.5
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
21.4
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
21.4
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
21.0
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
20.1
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
19.4
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
19.4
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
19.4
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
19.2
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
18.9
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
18.6
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
18.2
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
18.1
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
17.9
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
17.8
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
17.5
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
17.1
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
17.0
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
16.7
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
16.7
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
16.5
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
16.5
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
16.5
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
16.5
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
16.1
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
16.1
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
16.0
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
15.7
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
15.6
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
15.4
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
15.2
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
14.9
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
14.7
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
14.1
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
13.9
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
13.8
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
13.7
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
13.6
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
13.5
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
13.5
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
13.5
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
13.1
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
12.5
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
12.5
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
12.2
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
12.0
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
12.0
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
11.9
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
11.9
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
11.7
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
11.5
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
11.3
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
11.2
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
11.2
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
11.1
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
10.8
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
10.7
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
10.6
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
10.6
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
10.4
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
10.4
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
10.4
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
10.2
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
9.8
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
9.8
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
9.6
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
9.6
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
9.6
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
9.5
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
9.4
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
9.4
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
9.3
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
9.2
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
8.9
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
8.9
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
8.8
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
8.8
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
8.7
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
8.7
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
8.6
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
8.6
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
8.5
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
8.3
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
8.3
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
7.9
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
7.9
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
7.9
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
7.8
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
7.8
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
7.7
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
7.7
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
7.7
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
7.7
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
7.6
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
7.6
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
7.6
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
7.4
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
7.4
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
7.4
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
7.4
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
7.4
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
7.3
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
7.2
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
7.1
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
6.9
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
6.9
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
6.8
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
6.8
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
6.6
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
6.6
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
6.5
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
6.5
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
6.5
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
6.5
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
6.4
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
6.4
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
6.4
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
6.4
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
6.3
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
6.2
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
6.2
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
6.0
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
6.0
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
5.9
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
5.9
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
5.8
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
5.8
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
5.8
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
5.7
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
5.7
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
5.6
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
5.5
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
5.5
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
5.5
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
5.4
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
5.4
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
5.4
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
5.4
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
5.4
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
5.3
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
5.3
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
5.3
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
5.3
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
5.3
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
5.2
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
5.1
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
5.1
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
5.0
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
5.0
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
5.0
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
5.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
5.0
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
4.9
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
4.9
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
4.9
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
4.9
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
4.9
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
4.8
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
4.7
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
4.7
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
4.6
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
4.6
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
4.6
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
4.6
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
4.5
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
4.5
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
4.4
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
4.4
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
4.3
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
4.3
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
4.2
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
4.2
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
4.2
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
4.2
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
4.1
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
4.1
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
4.1
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
4.1
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
4.1
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
3.9
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
3.8
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
3.7
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
3.7
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
3.6
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
3.5
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
3.5
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
3.5
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
3.5
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
3.5
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
3.5
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
3.4
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
3.4
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
3.4
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
3.4
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
3.4
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
3.4
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
3.3
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
3.3
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
3.2
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
3.2
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
3.1
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
3.1
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
3.1
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
3.0
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
3.0
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
2.9
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
2.8
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
2.8
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
2.8
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
2.8
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
2.7
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
2.6
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
2.4
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
2.4
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
2.3
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
2.3
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
2.3
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
2.3
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
2.2
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
2.2
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
2.2
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
2.1
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
2.1
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
2.0
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
2.0
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
2.0
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
1.9
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
1.9
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
1.8
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
1.6
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
1.6
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
1.5
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
1.5
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
1.4
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
1.3
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
1.3
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
1.2
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
1.2
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
1.2
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
1.2
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
1.2
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
1.1
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
1.1
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
1.1
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
1.0
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
0.8
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
0.7
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
0.6
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
0.5
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
0.5
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
0.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0077490003
Tumor
0.9
CPT0011240003
Tumor
0.9
CPT0092190003
Normal
0.8
CPT0012370003
Tumor
0.8
CPT0000640003
Tumor
0.8
CPT0009000003
Tumor
0.7
CPT0010120001
Normal
0.7
CPT0000780007
Tumor
0.7
CPT0088900003
Tumor
0.7
CPT0077320001
Normal
0.7
CPT0079300001
Normal
0.6
CPT0010160003
Tumor
0.6
CPT0012900004
Tumor
0.6
CPT0014370004
Tumor
0.6
CPT0088760003
Tumor
0.6
CPT0085670003
Tumor
0.6
CPT0015910003
Tumor
0.6
CPT0075720003
Tumor
0.5
CPT0088630003
Tumor
0.5
CPT0063320003
Tumor
0.5
CPT0006440003
Tumor
0.5
CPT0069000003
Tumor
0.5
CPT0001220008
Tumor
0.4
CPT0071150004
Tumor
0.4
CPT0012080003
Tumor
0.4
CPT0065870003
Tumor
0.4
CPT0025060001
Normal
0.4
CPT0086870003
Tumor
0.4
CPT0069190001
Normal
0.4
CPT0006630003
Tumor
0.4
CPT0025350003
Tumor
0.4
CPT0000870016
Tumor
0.4
CPT0066470004
Tumor
0.3
CPT0089020003
Tumor
0.3
CPT0079510001
Normal
0.3
CPT0077110003
Tumor
0.3
CPT0024680001
Normal
0.3
CPT0025170003
Tumor
0.3
CPT0079270003
Tumor
0.3
CPT0078930003
Tumor
0.3
CPT0076350001
Normal
0.3
CPT0077310003
Tumor
0.3
CPT0092290003
Tumor
0.3
CPT0001270001
Normal
0.3
CPT0025880003
Tumor
0.3
CPT0087040003
Tumor
0.3
CPT0078830003
Tumor
0.3
CPT0012640003
Normal
0.3
CPT0012920003
Normal
0.3
CPT0066480003
Tumor
0.3
CPT0017410003
Tumor
0.2
CPT0089460004
Tumor
0.2
CPT0006900003
Tumor
0.2
CPT0002370001
Normal
0.2
CPT0079480003
Tumor
0.2
CPT0084590001
Normal
0.2
CPT0001510001
Normal
0.2
CPT0084560003
Tumor
0.2
CPT0086970003
Normal
0.2
CPT0026410003
Tumor
0.2
CPT0020130001
Normal
0.2
CPT0019130003
Tumor
0.2
CPT0065930003
Tumor
0.2
CPT0078530001
Normal
0.2
CPT0012570003
Normal
0.2
CPT0086030003
Tumor
0.2
CPT0092730003
Tumor
0.2
CPT0079230003
Tumor
0.2
CPT0001190001
Normal
0.2
CPT0015810003
Tumor
0.2
CPT0013790003
Normal
0.2
CPT0069010001
Normal
0.2
CPT0000890001
Normal
0.2
CPT0025920001
Normal
0.1
CPT0012290003
Normal
0.1
CPT0088570001
Normal
0.1
CPT0014470001
Normal
0.1
CPT0079380003
Tumor
0.1
CPT0019160001
Normal
0.1
CPT0021240003
Tumor
0.1
CPT0010170001
Normal
0.1
CPT0019990003
Tumor
0.1
CPT0075170001
Normal
0.1
CPT0025580004
Tumor
0.1
CPT0065690003
Tumor
0.1
CPT0092790003
Tumor
0.1
CPT0025110003
Tumor
0.1
CPT0001550001
Normal
0.1
CPT0078990003
Tumor
0.1
CPT0075560003
Tumor
0.1
CPT0020020001
Normal
0.1
CPT0081600003
Tumor
0.1
CPT0001540009
Tumor
0.1
CPT0009020003
Normal
0.1
CPT0065750003
Tumor
0.1
CPT0092160003
Tumor
0.1
CPT0012670003
Tumor
0.1
CPT0077140001
Normal
0.1
CPT0082010001
Normal
0.1
CPT0001230001
Normal
0.0
CPT0012090003
Normal
0.0
CPT0086830003
Normal
0.0
CPT0023690003
Tumor
0.0
CPT0088500001
Normal
0.0
CPT0065820001
Normal
0.0
CPT0064400001
Normal
0.0
CPT0065810003
Tumor
0.0
CPT0088690003
Tumor
0.0
CPT0017850003
Tumor
0.0
CPT0066520001
Normal
0.0
CPT0079000001
Normal
0.0
CPT0092740003
Normal
0.0
CPT0006950001
Normal
0.0
CPT0014350001
Normal
0.0
CPT0006530001
Normal
0.0
CPT0081620001
Normal
0.0
CPT0025290003
Tumor
0.0
CPT0007470001
Normal
0.0
CPT0088710001
Normal
0.0
CPT0075130003
Tumor
0.0
CPT0063330001
Normal
0.0
CPT0014130001
Normal
0.0
CPT0000660001
Normal
0.0
CPT0089040001
Normal
0.0
CPT0025610001
Normal
-0.1
CPT0009060003
Tumor
-0.1
CPT0088640003
Normal
-0.1
CPT0025230003
Tumor
-0.1
CPT0000790001
Normal
-0.1
CPT0088480003
Tumor
-0.1
CPT0081990003
Tumor
-0.1
CPT0064370003
Tumor
-0.1
CPT0012770003
Normal
-0.1
CPT0077500001
Normal
-0.1
CPT0075570001
Normal
-0.1
CPT0018250001
Normal
-0.1
CPT0086890003
Normal
-0.1
CPT0066430001
Normal
-0.1
CPT0009080003
Normal
-0.1
CPT0017450001
Normal
-0.1
CPT0086950003
Tumor
-0.1
CPT0063640001
Normal
-0.1
CPT0088780001
Normal
-0.1
CPT0078670001
Normal
-0.1
CPT0010110003
Tumor
-0.1
CPT0001350001
Normal
-0.1
CPT0092310003
Normal
-0.2
CPT0006730001
Normal
-0.2
CPT0086370003
Normal
-0.2
CPT0078940001
Normal
-0.2
CPT0007320003
Tumor
-0.2
CPT0023360001
Normal
-0.2
CPT0026420001
Normal
-0.2
CPT0007870001
Normal
-0.2
CPT0007860003
Tumor
-0.2
CPT0002350011
Tumor
-0.2
CPT0024670003
Tumor
-0.2
CPT0079410003
Tumor
-0.2
CPT0065450001
Normal
-0.2
CPT0001260009
Tumor
-0.2
CPT0079430001
Normal
-0.2
CPT0065430003
Tumor
-0.2
CPT0087050003
Normal
-0.3
CPT0086820003
Tumor
-0.3
CPT0023710001
Normal
-0.3
CPT0078840001
Normal
-0.3
CPT0002270011
Tumor
-0.3
CPT0001180009
Tumor
-0.3
CPT0078510003
Tumor
-0.3
CPT0089480003
Normal
-0.3
CPT0014160003
Tumor
-0.3
CPT0012550003
Tumor
-0.3
CPT0088920001
Normal
-0.3
CPT0092800003
Normal
-0.3
CPT0001500009
Tumor
-0.3
CPT0014450004
Tumor
-0.4
CPT0069160003
Tumor
-0.4
CPT0079180003
Tumor
-0.4
CPT0012280003
Tumor
-0.4
CPT0020120003
Tumor
-0.4
CPT0025050003
Tumor
-0.5
CPT0063630003
Tumor
-0.5
CPT0086360003
Tumor
-0.6
CPT0001340003
Tumor
-0.7
CPT0023350003
Tumor
-0.7
CPT0015730003
Tumor
-0.7
CPT0081880003
Tumor
-0.8
CPT0078660003
Tumor
-0.8
CPT0011410003
Tumor
-1.0
CPT0076330003
Tumor
-1.2
CPT0088970003
Tumor
-1.2
CPT0078800003
Tumor
-1.3
CPT0088550004
Tumor
-1.4
CPT0012180003
Tumor
-1.6
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.