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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CACYBP is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
20.3
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
100.5
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
83.1
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
54.6
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
41.1
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
40.1
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
39.3
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
38.6
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
38.1
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
35.9
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
31.9
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
31.2
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
30.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
29.4
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
25.0
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
24.9
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
23.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
22.2
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
21.9
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
21.2
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
20.9
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
20.6
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
19.7
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
19.6
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
18.5
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
18.3
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
18.2
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
17.2
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
16.9
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
16.6
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
16.6
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
16.2
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
15.0
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
14.9
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
14.8
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
14.5
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
14.2
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
14.2
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
14.0
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
13.9
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
12.9
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
12.7
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
12.4
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
12.4
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
12.3
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
12.1
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
11.6
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
11.3
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
11.0
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
10.2
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
10.2
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
9.8
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
9.1
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
8.8
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
8.6
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
8.4
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
8.4
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
8.4
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
7.8
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
7.5
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
6.5
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
6.3
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
6.1
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
5.4
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CACYBP is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
26.3
Number of samples
521
Samples
Sample
Description
TPM
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
91.3
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
84.7
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
79.8
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
73.8
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
69.8
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
66.9
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
62.9
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
62.5
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
60.8
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
60.4
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
58.4
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
58.3
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
55.9
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
55.0
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
54.3
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
53.9
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
51.5
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
51.3
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
49.5
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
49.3
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
48.5
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
48.4
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
48.0
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
47.7
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
47.2
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
47.0
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
46.4
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
45.9
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
45.4
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
44.8
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
44.3
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
44.3
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
44.2
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
43.8
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
43.4
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
43.2
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
43.1
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
42.6
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
42.5
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
42.2
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
42.1
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
41.6
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
41.0
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
40.3
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
40.3
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
40.2
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
39.7
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
39.4
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
39.2
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
39.2
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
39.1
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
39.0
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
38.4
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
38.4
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
38.0
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
38.0
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
37.9
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
37.8
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
37.6
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
37.5
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
37.2
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
37.2
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
37.1
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
36.8
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
36.6
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
36.4
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
36.3
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
36.1
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
36.1
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
36.0
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
35.6
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
35.4
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
35.3
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
34.9
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
34.8
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
34.8
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
34.7
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
34.7
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
34.7
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
34.5
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
34.3
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
34.2
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
34.2
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
34.1
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
34.1
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
34.1
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
34.0
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
34.0
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
34.0
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
34.0
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
33.9
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
33.9
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
33.9
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
33.8
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
33.8
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
33.7
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
33.7
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
33.6
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
33.6
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
33.6
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
33.5
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
33.3
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
33.3
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
33.2
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
33.2
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
33.2
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
33.1
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
33.1
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
33.0
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
32.8
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
32.7
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
32.6
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
32.6
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
32.5
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
32.5
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
32.4
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
32.4
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
32.4
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
32.4
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
32.4
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
32.3
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
32.3
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
32.3
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
32.2
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
32.2
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
32.2
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
32.1
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
32.0
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
32.0
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
32.0
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
31.9
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
31.9
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
31.9
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
31.8
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
31.8
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
31.8
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
31.7
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
31.6
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
31.4
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
31.4
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
31.3
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
31.3
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
31.2
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
31.1
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
31.1
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
31.0
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
31.0
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
30.9
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
30.7
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
30.6
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
30.6
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
30.6
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
30.5
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
30.4
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
30.3
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
30.3
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
30.3
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
30.3
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
30.2
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
30.2
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
30.1
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
30.1
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
30.1
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
30.0
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
29.7
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
29.7
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
29.6
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
29.6
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
29.6
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
29.5
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
29.4
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
29.3
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
29.3
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
29.2
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
29.0
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
29.0
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
29.0
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
28.8
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
28.7
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
28.7
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
28.7
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
28.4
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
28.3
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
28.3
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
28.3
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
28.3
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
28.2
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
28.2
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
28.1
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
28.1
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
28.0
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
28.0
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
28.0
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
28.0
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
27.9
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
27.9
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
27.8
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
27.8
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
27.7
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
27.7
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
27.7
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
27.7
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
27.6
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
27.6
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
27.5
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
27.4
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
27.4
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
27.3
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
27.2
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
27.1
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
27.0
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
26.9
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
26.8
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
26.7
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
26.7
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
26.7
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
26.6
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
26.6
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
26.6
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
26.5
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
26.5
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
26.3
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
26.3
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
26.2
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
26.2
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
26.2
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
26.2
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
26.1
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
26.0
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
25.9
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
25.9
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
25.8
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
25.8
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
25.8
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
25.7
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
25.7
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
25.7
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
25.7
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
25.7
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
25.7
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
25.6
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
25.6
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
25.6
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
25.5
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
25.5
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
25.5
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
25.5
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
25.5
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
25.3
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
25.3
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
25.3
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
25.2
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
25.1
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
25.1
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
25.1
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
25.1
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
25.1
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
25.0
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
25.0
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
25.0
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
25.0
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
25.0
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
24.9
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
24.8
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
24.7
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
24.7
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
24.6
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
24.5
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
24.5
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
24.4
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
24.4
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
24.4
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
24.3
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
24.3
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
24.1
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
24.1
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
24.1
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
24.1
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
24.0
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
24.0
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
24.0
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
23.9
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
23.9
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
23.9
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
23.9
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
23.8
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
23.8
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
23.8
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
23.7
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
23.7
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
23.7
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
23.6
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
23.5
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
23.5
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
23.5
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
23.5
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
23.4
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
23.4
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
23.2
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
23.2
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
23.2
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
23.1
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
23.0
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
22.9
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
22.9
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
22.9
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
22.9
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
22.8
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
22.7
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
22.7
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
22.5
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
22.4
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
22.4
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
22.4
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
22.4
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
22.3
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
22.3
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
22.3
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
22.2
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
22.2
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
22.2
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
22.1
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
22.1
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
22.1
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
22.1
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
22.1
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
22.0
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
22.0
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
22.0
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
21.9
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
21.9
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
21.9
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
21.9
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
21.8
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
21.8
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
21.8
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
21.8
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
21.8
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
21.8
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
21.7
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
21.6
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
21.5
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
21.5
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
21.5
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
21.4
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
21.4
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
21.4
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
21.4
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
21.2
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
21.2
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
21.1
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
21.1
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
21.1
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
21.1
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
21.0
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
21.0
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
20.9
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
20.9
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
20.8
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
20.8
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
20.7
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
20.7
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
20.7
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
20.7
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
20.7
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
20.6
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
20.6
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
20.6
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
20.5
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
20.4
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
20.4
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
20.4
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
20.3
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
20.3
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
20.0
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
20.0
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
19.9
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
19.9
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
19.8
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
19.8
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
19.7
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
19.6
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
19.6
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
19.5
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
19.5
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
19.5
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
19.4
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
19.4
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
19.3
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
19.3
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
19.2
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
19.2
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
19.2
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
19.1
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
19.1
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
19.0
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
19.0
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
18.9
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
18.9
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
18.9
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
18.8
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
18.7
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
18.6
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
18.6
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
18.6
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
18.5
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
18.5
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
18.4
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
18.4
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
18.4
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
18.4
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
18.3
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
18.3
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
18.3
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
18.3
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
18.2
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
18.2
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
18.0
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
18.0
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
17.9
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
17.9
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
17.7
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
17.6
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
17.6
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
17.6
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
17.5
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
17.5
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
17.5
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
17.2
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
17.1
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
17.1
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
17.0
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
17.0
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
17.0
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
16.9
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
16.9
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
16.8
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
16.8
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
16.7
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
16.7
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
16.5
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
16.3
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
16.3
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
16.2
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
16.2
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
16.1
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
16.0
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
16.0
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
15.8
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
15.7
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
15.7
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
15.6
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
15.6
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
15.6
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
15.4
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
15.3
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
15.3
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
15.2
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
15.2
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
15.2
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
15.1
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
15.1
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
15.0
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
14.8
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
14.6
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
14.6
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
14.6
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
14.5
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
14.5
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
14.4
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
14.3
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
14.3
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
14.1
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
13.9
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
13.8
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
13.7
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
13.7
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
13.6
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
13.6
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
13.5
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
13.5
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
13.4
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
13.4
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
13.2
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
13.1
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
13.0
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
12.9
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
12.9
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
12.3
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
12.0
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
11.7
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
11.7
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
11.7
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
11.4
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
11.4
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
11.4
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
11.3
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
10.9
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
10.9
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
10.8
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
10.8
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
10.3
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
10.1
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
10.0
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
9.9
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
9.6
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
9.2
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
9.0
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
8.7
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
8.3
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
8.1
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
8.1
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
7.9
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
7.8
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
7.6
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
7.4
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
7.1
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
6.0
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
5.8
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
5.6
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CACYBP is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
27.0
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
97.5
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
89.9
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
70.0
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
49.1
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
48.8
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
47.4
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
47.2
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
44.4
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
42.4
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
40.7
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
40.3
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
39.4
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
39.2
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
37.2
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
35.9
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
34.7
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
34.7
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
34.3
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
33.6
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
32.3
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
32.3
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
32.0
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
31.5
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
30.7
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
30.5
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
30.2
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
29.3
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
29.0
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
28.1
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
28.1
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
28.0
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
27.9
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
27.5
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
27.4
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
26.8
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
26.8
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
26.2
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
25.5
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
25.4
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
24.7
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
24.2
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
24.1
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
23.9
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
23.8
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
23.7
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
23.7
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
23.6
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
23.5
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
23.3
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
23.2
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
23.1
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
23.0
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
23.0
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
22.9
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
22.9
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
22.7
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
22.7
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
22.6
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
22.0
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
22.0
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
21.7
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
21.5
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
21.4
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
21.4
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
21.3
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
21.0
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
20.9
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
20.8
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
20.4
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
20.4
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
20.1
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
20.1
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
20.1
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
19.9
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
19.9
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
19.9
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
19.3
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
19.0
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
18.9
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
18.8
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
18.3
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
18.3
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
18.2
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
18.2
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
18.1
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
18.0
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
17.9
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
17.9
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
17.2
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
17.0
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
16.9
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
16.7
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
15.9
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
15.4
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
14.8
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
14.5
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
14.3
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
14.1
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
13.1
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CACYBP is potential prognostic, high expression is unfavorable in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
28.9
Number of samples
282
Samples
Sample
Description
TPM
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
173.3
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
138.4
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
113.5
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
108.6
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
106.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
105.4
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
94.4
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
87.2
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
82.1
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
79.8
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
73.7
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
71.7
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
69.7
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
68.6
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
65.6
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
62.6
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
62.3
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
61.4
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
61.1
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
58.9
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
58.5
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
58.4
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
57.2
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
56.4
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
55.2
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
54.2
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
52.2
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
51.2
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
51.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
50.6
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
49.7
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
49.3
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
46.1
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
45.8
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
44.9
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
44.1
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
43.8
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
43.7
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
42.4
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
42.2
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
41.9
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
41.8
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
41.8
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
41.5
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
40.8
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
40.5
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
40.2
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
39.0
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
38.6
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
38.5
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
38.4
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
38.1
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
37.8
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
37.6
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
37.5
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
36.8
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
36.7
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
36.5
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
35.9
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
35.8
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
35.6
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
35.5
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
35.1
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
34.9
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
34.6
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
33.0
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
32.9
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
32.8
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
32.7
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
32.7
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
32.5
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
32.4
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
32.4
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
32.3
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
31.8
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
31.8
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
31.7
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
31.3
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
31.3
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
30.9
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
30.6
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
30.5
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
30.4
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
30.4
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
30.0
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
29.9
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
29.6
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
29.4
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
29.3
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
29.2
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
29.1
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
29.0
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
28.9
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
28.9
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
28.3
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
28.0
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
28.0
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
27.9
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
27.9
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
27.8
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
27.7
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
27.7
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
27.6
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
27.6
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
27.2
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
27.2
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
26.6
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
26.6
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
26.2
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
26.1
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
26.1
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
26.0
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
26.0
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
26.0
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
25.8
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
25.8
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
25.7
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
25.5
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
25.5
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
25.0
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
25.0
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
24.8
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
24.5
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
24.5
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
24.5
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
24.5
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
24.4
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
24.4
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
24.3
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
24.2
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
24.2
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
24.1
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
24.0
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
23.8
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
23.8
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
23.8
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
23.5
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
23.4
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
23.1
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
23.1
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
22.9
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
22.9
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
22.9
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
22.8
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
22.6
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
22.5
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
22.4
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
22.2
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
22.2
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
22.0
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
22.0
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
21.9
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
21.9
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
21.6
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
21.6
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
21.6
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
21.5
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
21.2
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
21.2
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
21.2
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
21.1
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
21.0
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
21.0
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
21.0
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
21.0
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
21.0
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
21.0
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
20.8
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
20.8
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
20.7
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
20.7
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
20.6
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
20.6
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
20.5
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
20.5
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
20.3
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
20.3
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
20.3
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
20.2
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
20.1
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
20.1
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
20.1
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
19.9
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
19.8
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
19.7
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
19.6
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
19.6
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
19.5
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
19.4
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
19.3
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
19.2
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
19.1
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
19.0
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
18.9
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
18.8
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
18.7
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
18.6
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
18.6
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
18.3
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
18.2
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
18.2
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
18.1
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
18.0
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
18.0
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
17.9
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
17.9
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
17.9
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
17.8
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
17.7
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
17.6
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
17.4
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
17.4
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
17.3
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
17.3
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
17.1
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
17.1
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
17.0
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
16.9
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
16.9
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
16.9
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
16.6
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
16.5
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
16.5
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
16.4
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
16.3
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
16.3
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
16.1
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
15.9
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
15.8
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
15.5
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
15.5
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
15.2
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
15.0
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
15.0
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
14.9
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
14.9
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
14.8
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
14.5
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
14.5
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
14.4
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
14.2
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
14.2
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
13.9
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
13.9
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
13.9
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
13.6
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
13.5
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
13.4
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
13.3
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
13.2
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
13.2
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
13.2
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
13.2
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
13.1
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
13.1
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
13.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
12.9
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
12.8
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
12.7
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
12.5
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
12.2
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
12.2
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
12.2
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
11.9
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
11.5
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
11.5
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
11.4
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
11.4
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
11.0
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
10.6
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
9.7
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
9.7
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
9.7
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
9.5
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
9.5
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
9.0
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
8.0
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
7.5
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
7.4
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
6.9
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
6.6
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
6.6
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RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0084560003
Tumor
0.9
CPT0001340003
Tumor
0.7
CPT0002350011
Tumor
0.7
CPT0025880003
Tumor
0.6
CPT0017410003
Tumor
0.6
CPT0001180009
Tumor
0.6
CPT0086820003
Tumor
0.6
CPT0001260009
Tumor
0.5
CPT0023350003
Tumor
0.5
CPT0076330003
Tumor
0.5
CPT0092740003
Normal
0.5
CPT0076350001
Normal
0.5
CPT0012180003
Tumor
0.4
CPT0086950003
Tumor
0.4
CPT0078800003
Tumor
0.4
CPT0012900004
Tumor
0.4
CPT0075130003
Tumor
0.4
CPT0009060003
Tumor
0.4
CPT0079430001
Normal
0.4
CPT0017450001
Normal
0.4
CPT0088900003
Tumor
0.3
CPT0078530001
Normal
0.3
CPT0001350001
Normal
0.3
CPT0025060001
Normal
0.3
CPT0079410003
Tumor
0.3
CPT0065450001
Normal
0.3
CPT0025610001
Normal
0.3
CPT0009080003
Normal
0.2
CPT0066430001
Normal
0.2
CPT0088920001
Normal
0.2
CPT0065430003
Tumor
0.2
CPT0092800003
Normal
0.2
CPT0026420001
Normal
0.2
CPT0006730001
Normal
0.2
CPT0024670003
Tumor
0.2
CPT0086370003
Normal
0.2
CPT0081880003
Tumor
0.2
CPT0002270011
Tumor
0.2
CPT0088550004
Tumor
0.2
CPT0013790003
Normal
0.2
CPT0017850003
Tumor
0.2
CPT0012090003
Normal
0.2
CPT0065820001
Normal
0.2
CPT0020130001
Normal
0.2
CPT0001540009
Tumor
0.2
CPT0007870001
Normal
0.2
CPT0021240003
Tumor
0.2
CPT0012770003
Normal
0.2
CPT0086890003
Normal
0.1
CPT0010110003
Tumor
0.1
CPT0079000001
Normal
0.1
CPT0063330001
Normal
0.1
CPT0075570001
Normal
0.1
CPT0088780001
Normal
0.1
CPT0010170001
Normal
0.1
CPT0000790001
Normal
0.1
CPT0026410003
Tumor
0.1
CPT0006440003
Tumor
0.1
CPT0077140001
Normal
0.1
CPT0018250001
Normal
0.1
CPT0023710001
Normal
0.1
CPT0087050003
Normal
0.1
CPT0012550003
Tumor
0.1
CPT0081620001
Normal
0.1
CPT0079230003
Tumor
0.1
CPT0000640003
Tumor
0.1
CPT0000890001
Normal
0.1
CPT0078670001
Normal
0.1
CPT0023360001
Normal
0.1
CPT0012570003
Normal
0.1
CPT0063630003
Tumor
0.1
CPT0014350001
Normal
0.1
CPT0064400001
Normal
0.1
CPT0082010001
Normal
0.1
CPT0024680001
Normal
0.1
CPT0012280003
Tumor
0.1
CPT0010120001
Normal
0.1
CPT0085670003
Tumor
0.1
CPT0001270001
Normal
0.1
CPT0012290003
Normal
0.1
CPT0078840001
Normal
0.1
CPT0069160003
Tumor
0.0
CPT0077500001
Normal
0.0
CPT0025050003
Tumor
0.0
CPT0014130001
Normal
0.0
CPT0078990003
Tumor
0.0
CPT0020020001
Normal
0.0
CPT0077110003
Tumor
0.0
CPT0089480003
Normal
0.0
CPT0092310003
Normal
0.0
CPT0069010001
Normal
0.0
CPT0001190001
Normal
0.0
CPT0063640001
Normal
0.0
CPT0089040001
Normal
0.0
CPT0020120003
Tumor
0.0
CPT0012370003
Tumor
0.0
CPT0092730003
Tumor
0.0
CPT0075170001
Normal
0.0
CPT0092190003
Normal
0.0
CPT0006530001
Normal
0.0
CPT0015730003
Tumor
0.0
CPT0007470001
Normal
0.0
CPT0078510003
Tumor
0.0
CPT0009000003
Tumor
0.0
CPT0086970003
Normal
0.0
CPT0071150004
Tumor
0.0
CPT0078830003
Tumor
0.0
CPT0078940001
Normal
0.0
CPT0084590001
Normal
0.0
CPT0066520001
Normal
0.0
CPT0079380003
Tumor
0.0
CPT0089460004
Tumor
0.0
CPT0012640003
Normal
0.0
CPT0012920003
Normal
-0.1
CPT0088640003
Normal
-0.1
CPT0015810003
Tumor
-0.1
CPT0011240003
Tumor
-0.1
CPT0077320001
Normal
-0.1
CPT0012080003
Tumor
-0.1
CPT0014470001
Normal
-0.1
CPT0014450004
Tumor
-0.1
CPT0006950001
Normal
-0.1
CPT0006630003
Tumor
-0.1
CPT0007320003
Tumor
-0.1
CPT0019160001
Normal
-0.1
CPT0025920001
Normal
-0.1
CPT0014370004
Tumor
-0.1
CPT0086360003
Tumor
-0.1
CPT0001510001
Normal
-0.1
CPT0075560003
Tumor
-0.1
CPT0014160003
Tumor
-0.1
CPT0065750003
Tumor
-0.1
CPT0079510001
Normal
-0.1
CPT0019990003
Tumor
-0.1
CPT0092160003
Tumor
-0.1
CPT0088570001
Normal
-0.1
CPT0000660001
Normal
-0.1
CPT0086830003
Normal
-0.1
CPT0066480003
Tumor
-0.1
CPT0010160003
Tumor
-0.1
CPT0069190001
Normal
-0.1
CPT0065870003
Tumor
-0.1
CPT0079480003
Tumor
-0.1
CPT0078930003
Tumor
-0.1
CPT0088480003
Tumor
-0.1
CPT0086870003
Tumor
-0.1
CPT0069000003
Tumor
-0.2
CPT0065810003
Tumor
-0.2
CPT0001220008
Tumor
-0.2
CPT0001550001
Normal
-0.2
CPT0088710001
Normal
-0.2
CPT0009020003
Normal
-0.2
CPT0025580004
Tumor
-0.2
CPT0025230003
Tumor
-0.2
CPT0088500001
Normal
-0.2
CPT0077490003
Tumor
-0.2
CPT0001500009
Tumor
-0.2
CPT0066470004
Tumor
-0.2
CPT0079270003
Tumor
-0.2
CPT0077310003
Tumor
-0.2
CPT0000780007
Tumor
-0.2
CPT0089020003
Tumor
-0.2
CPT0025350003
Tumor
-0.2
CPT0025110003
Tumor
-0.2
CPT0012670003
Tumor
-0.2
CPT0002370001
Normal
-0.2
CPT0081990003
Tumor
-0.2
CPT0007860003
Tumor
-0.2
CPT0006900003
Tumor
-0.3
CPT0086030003
Tumor
-0.3
CPT0087040003
Tumor
-0.3
CPT0081600003
Tumor
-0.3
CPT0001230001
Normal
-0.3
CPT0064370003
Tumor
-0.3
CPT0092790003
Tumor
-0.3
CPT0063320003
Tumor
-0.3
CPT0025170003
Tumor
-0.3
CPT0023690003
Tumor
-0.3
CPT0011410003
Tumor
-0.3
CPT0079300001
Normal
-0.3
CPT0088970003
Tumor
-0.3
CPT0088760003
Tumor
-0.3
CPT0075720003
Tumor
-0.3
CPT0000870016
Tumor
-0.3
CPT0015910003
Tumor
-0.3
CPT0088630003
Tumor
-0.3
CPT0079180003
Tumor
-0.3
CPT0025290003
Tumor
-0.4
CPT0019130003
Tumor
-0.4
CPT0065930003
Tumor
-0.4
CPT0078660003
Tumor
-0.4
CPT0092290003
Tumor
-0.4
CPT0088690003
Tumor
-0.5
CPT0065690003
Tumor
-0.7
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.