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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RAB3GAP1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
13.1
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
42.5
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
30.3
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
28.0
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
26.8
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
24.4
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
23.5
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
20.9
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
20.5
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
20.2
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
20.0
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
18.6
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
17.3
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
16.7
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
16.7
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
16.6
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
16.4
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
16.3
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
16.2
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
15.7
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
15.5
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
15.4
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
14.7
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
13.9
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
13.8
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
13.5
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
13.4
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
13.3
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
13.2
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
13.2
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
12.9
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
12.8
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
12.4
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
12.2
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
12.1
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
11.6
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
10.8
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
10.8
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
10.8
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
10.7
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
10.1
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
10.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
10.0
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
9.7
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
9.0
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
8.5
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
8.1
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
8.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
7.8
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
7.3
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
7.2
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
6.9
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
6.9
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
6.8
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
6.7
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
6.6
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
6.2
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
6.2
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
5.9
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
5.8
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
5.4
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
5.4
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
5.1
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
3.3
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RAB3GAP1 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
20.4
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
45.1
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
42.8
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
42.7
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
41.7
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
40.5
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
40.0
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
39.9
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
39.4
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
39.2
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
38.4
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
38.1
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
38.0
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
37.9
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
36.3
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
35.7
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
35.5
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
35.4
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
35.0
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
34.8
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
34.8
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
34.5
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
34.1
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
34.0
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
33.6
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
33.6
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
33.2
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
33.2
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
33.0
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
32.9
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
32.8
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
32.8
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
32.5
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
32.4
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
32.2
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
32.1
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
32.1
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
32.1
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
32.1
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
31.8
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
31.8
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
31.6
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
31.6
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
31.4
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
31.4
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
31.4
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
31.3
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
31.3
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
31.1
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
31.0
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
31.0
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
30.9
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
30.9
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
30.9
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
30.9
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
30.9
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
30.8
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
30.7
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
30.6
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
30.6
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
30.4
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
30.3
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
30.2
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
30.2
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
30.0
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
29.8
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
29.7
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
29.6
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
29.5
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
29.3
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
29.3
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
29.1
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
29.1
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
29.1
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
29.0
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
28.9
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
28.9
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
28.9
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
28.9
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
28.8
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
28.8
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
28.7
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
28.6
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
28.6
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
28.5
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
28.5
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
28.4
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
28.4
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
28.4
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
28.2
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
28.2
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
28.2
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
28.1
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
28.1
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
28.0
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
28.0
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
27.9
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
27.9
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
27.9
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
27.8
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
27.8
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
27.8
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
27.7
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
27.7
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
27.7
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
27.6
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
27.5
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
27.4
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
27.3
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
27.2
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
27.2
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
27.1
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
27.1
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
27.1
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
27.0
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
27.0
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
26.9
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
26.7
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
26.6
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
26.6
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
26.5
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
26.5
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
26.4
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
26.4
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
26.4
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
26.3
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
26.3
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
26.3
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
26.2
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
26.2
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
26.1
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
26.0
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
25.9
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
25.8
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
25.4
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
25.4
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
25.4
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
25.3
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
25.3
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
25.2
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
25.1
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
25.0
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
25.0
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
25.0
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
25.0
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
24.9
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
24.9
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
24.8
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
24.8
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
24.7
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
24.7
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
24.5
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
24.5
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
24.5
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
24.5
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
24.4
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
24.3
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
24.3
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
24.2
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
24.2
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
24.1
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
24.1
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
24.1
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
24.0
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
24.0
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
24.0
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
23.9
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
23.9
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
23.8
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
23.7
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
23.7
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
23.7
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
23.6
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
23.6
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
23.6
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
23.6
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
23.5
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
23.5
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
23.5
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
23.4
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
23.4
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
23.4
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
23.3
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
23.3
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
23.3
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
23.3
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
23.2
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
23.2
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
23.1
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
23.0
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
23.0
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
23.0
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
22.9
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
22.8
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
22.7
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
22.6
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
22.5
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
22.5
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
22.5
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
22.5
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
22.4
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
22.4
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
22.4
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
22.3
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
22.3
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
22.3
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
22.2
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
22.2
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
22.1
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
22.1
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
22.0
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
22.0
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
22.0
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
22.0
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
21.9
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
21.9
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
21.9
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
21.8
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
21.8
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
21.8
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
21.7
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
21.7
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
21.7
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
21.7
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
21.6
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
21.6
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
21.6
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
21.5
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
21.5
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
21.4
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
21.4
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
21.4
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
21.3
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
21.3
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
21.3
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
21.3
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
21.2
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
21.2
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
21.2
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
21.1
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
21.1
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
21.1
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
21.0
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
21.0
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
21.0
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
21.0
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
21.0
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
20.9
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
20.9
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
20.9
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
20.9
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
20.9
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
20.8
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
20.8
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
20.8
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
20.8
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
20.7
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
20.6
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
20.5
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
20.5
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
20.5
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
20.4
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
20.4
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
20.4
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
20.3
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
20.3
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
20.3
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
20.3
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
20.2
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
20.2
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
20.1
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
20.1
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
20.1
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
20.1
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
20.1
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
20.0
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
20.0
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
19.9
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
19.9
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
19.9
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
19.9
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
19.9
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
19.8
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
19.7
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
19.7
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
19.7
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
19.6
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
19.6
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
19.5
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
19.5
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
19.4
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
19.2
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
19.2
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
19.1
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
19.1
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
19.0
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
19.0
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
19.0
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
18.9
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
18.9
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
18.8
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
18.7
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
18.7
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
18.7
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
18.6
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
18.6
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
18.6
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
18.6
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
18.5
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
18.4
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
18.3
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
18.2
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
18.2
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
18.2
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
18.2
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
18.1
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
18.0
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
17.9
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
17.9
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
17.8
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
17.8
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
17.7
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
17.7
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
17.6
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
17.6
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
17.6
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
17.5
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
17.4
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
17.3
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
17.3
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
17.3
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
17.3
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
17.2
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
17.2
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
17.2
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
17.2
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
17.1
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
17.1
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
17.0
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
17.0
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
17.0
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
16.9
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
16.9
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
16.9
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
16.9
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
16.9
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
16.9
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
16.8
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
16.8
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
16.7
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
16.7
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
16.7
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
16.6
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
16.5
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
16.5
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
16.4
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
16.4
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
16.3
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
16.3
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
16.3
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
16.2
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
16.2
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
16.2
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
16.0
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
16.0
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
15.9
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
15.9
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
15.9
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
15.8
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
15.7
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
15.7
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
15.7
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
15.7
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
15.7
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
15.7
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
15.6
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
15.6
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
15.5
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
15.5
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
15.4
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
15.3
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
15.2
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
15.1
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
15.1
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
15.1
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
15.1
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
15.0
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
15.0
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
14.9
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
14.9
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
14.9
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
14.8
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
14.7
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
14.6
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
14.5
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
14.4
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
14.4
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
14.3
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
14.2
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
14.2
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
14.1
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
14.1
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
14.1
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
14.1
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
14.1
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
14.0
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
14.0
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
13.9
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
13.9
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
13.7
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
13.7
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
13.7
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
13.7
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
13.7
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
13.3
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
13.3
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
13.3
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
13.3
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
13.1
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
13.1
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
13.1
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
13.1
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
13.1
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
13.0
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
13.0
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
12.9
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
12.9
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
12.8
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
12.8
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
12.8
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
12.6
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
12.6
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
12.5
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
12.4
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
12.4
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
12.3
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
12.2
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
12.2
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
12.2
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
12.1
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
12.0
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
11.9
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
11.9
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
11.8
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
11.8
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
11.8
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
11.7
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
11.7
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
11.6
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
11.5
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
11.4
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
11.3
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
11.2
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
11.1
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
11.0
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
11.0
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
11.0
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
10.9
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
10.9
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
10.9
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
10.9
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
10.8
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
10.7
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
10.7
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
10.6
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
10.5
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
10.3
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
10.2
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
10.2
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
10.0
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
9.9
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
9.9
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
9.9
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
9.8
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
9.5
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
9.5
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
9.5
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
9.4
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
9.2
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
9.2
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
9.1
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
9.0
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
9.0
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
8.8
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
8.8
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
8.8
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
8.6
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
8.6
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
8.6
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
8.6
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
8.5
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
8.5
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
8.4
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
8.3
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
8.2
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
8.2
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
8.0
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
7.7
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
7.3
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
7.0
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
7.0
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
6.8
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
6.6
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
6.6
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
6.5
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
6.2
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
6.0
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
5.9
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
5.7
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
5.5
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
5.4
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
5.0
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
4.8
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
4.8
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
4.7
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
4.5
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
4.3
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
4.2
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
4.0
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
4.0
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
3.9
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RAB3GAP1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
27.3
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
44.7
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
44.6
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
43.4
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
43.3
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
42.4
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
41.3
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
41.1
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
40.2
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
38.9
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
38.1
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
38.1
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
37.7
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
37.5
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
37.4
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
36.7
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
36.5
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
35.4
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
35.3
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
34.2
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
33.8
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
33.1
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
32.6
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
32.4
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
32.3
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
32.3
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
32.0
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
32.0
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
31.9
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
31.9
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
31.2
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
30.9
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
29.6
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
29.6
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
29.3
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
29.2
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
29.2
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
29.2
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
28.9
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
28.7
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
28.7
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
28.2
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
28.0
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
27.8
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
27.7
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
27.7
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
27.4
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
27.2
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
27.2
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
26.5
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
26.4
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
26.3
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
26.2
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
26.1
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
26.0
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
26.0
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
25.8
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
25.8
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
25.6
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
25.6
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
25.5
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
25.4
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
25.4
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
25.2
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
25.1
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
24.9
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
24.6
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
24.4
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
23.8
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
23.7
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
23.7
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
23.5
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
23.5
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
23.4
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
22.8
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
22.5
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
22.3
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
22.1
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
21.9
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
21.8
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
21.6
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
20.2
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
20.2
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
19.8
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
19.8
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
19.1
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
18.9
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
18.8
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
18.4
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
18.0
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
17.2
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
16.6
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
16.2
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
15.7
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
15.4
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
14.7
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
13.5
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
13.2
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
13.1
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
13.0
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RAB3GAP1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
19.2
Number of samples
282
Samples
Sample
Description
TPM
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
48.7
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
47.3
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
47.2
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
45.3
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
44.1
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
42.9
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
42.7
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
41.9
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
41.5
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
41.4
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
41.1
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
39.5
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
39.4
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
38.8
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
38.3
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
37.7
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
37.0
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
36.8
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
35.4
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
35.2
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
34.4
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
34.1
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
34.1
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
34.1
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
33.9
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
33.7
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
33.4
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
33.2
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
33.1
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
33.0
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
32.7
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
32.4
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
31.5
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
31.2
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
31.2
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
30.9
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
30.8
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
30.7
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
30.6
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
30.6
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
30.5
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
30.2
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
30.2
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
29.7
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
29.5
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
29.2
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
29.1
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
29.0
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
28.8
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
28.6
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
28.1
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
27.9
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
27.8
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
27.6
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
27.0
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
27.0
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
26.8
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
26.7
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
26.6
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
26.6
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
26.6
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
26.5
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
26.5
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
26.5
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
26.3
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
26.1
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
26.0
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
26.0
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
25.7
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
25.6
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
25.6
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
25.5
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
25.3
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
25.3
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
25.2
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
25.1
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
25.0
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
24.7
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
24.7
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
23.9
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
23.7
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
23.7
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
23.7
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
23.4
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
23.4
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
23.4
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
23.4
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
23.3
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
23.1
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
23.1
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
23.1
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
22.9
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
22.8
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
22.8
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
22.7
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
22.7
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
22.1
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
21.9
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
21.8
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
21.8
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
21.7
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
21.6
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
21.4
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
20.8
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
20.5
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
20.4
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
20.3
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
20.3
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
20.1
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
20.1
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
19.7
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
19.7
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
19.7
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
19.6
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
19.6
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
19.5
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
19.5
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
19.0
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
19.0
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
19.0
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
18.8
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
18.5
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
18.5
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
18.4
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
18.2
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
18.2
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
18.0
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
18.0
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
17.9
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
17.9
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
17.7
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
17.7
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
17.5
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
17.5
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
17.4
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
17.4
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
17.4
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
17.3
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
17.3
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
17.3
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
17.3
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
17.2
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
17.2
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
17.2
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
17.2
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
17.1
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
17.1
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
17.1
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
17.0
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
16.9
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
16.9
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
16.9
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
16.8
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
16.8
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
16.8
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
16.5
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
16.2
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
16.1
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
16.1
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
16.1
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
16.0
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
15.5
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
15.5
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
15.4
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
15.3
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
15.2
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
15.2
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
15.1
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
15.0
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
15.0
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
14.9
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
14.8
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
14.6
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
14.6
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
14.5
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
14.5
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
14.4
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
14.4
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
14.3
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
14.2
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
14.2
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
14.1
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
14.1
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
14.0
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
13.9
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
13.9
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
13.8
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
13.8
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
13.6
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
13.6
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
13.5
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
13.5
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
13.4
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
13.4
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
13.2
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
13.2
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
13.2
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
13.1
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
13.0
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
13.0
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
12.9
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
12.8
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
12.7
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
12.6
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
12.6
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
12.6
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
12.6
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
12.3
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
12.3
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
12.2
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
12.2
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
12.1
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
11.9
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
11.9
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
11.8
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
11.6
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
11.6
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
11.5
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
11.3
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
11.1
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
11.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
11.0
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
11.0
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
10.7
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
10.7
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
10.6
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
10.5
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
10.5
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
10.4
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
10.4
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
10.3
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
10.3
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
10.2
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
10.0
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
10.0
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
9.9
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
9.8
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
9.7
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
9.6
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
9.6
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
9.6
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
9.3
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
9.2
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
9.2
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
8.9
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
8.8
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
8.7
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
8.7
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
8.5
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
8.5
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
8.4
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
8.4
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
8.3
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
8.3
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
8.2
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
7.9
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
7.8
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
7.7
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
7.7
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
7.7
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
7.3
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
7.1
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
6.9
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
6.9
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
6.8
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
6.5
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
6.5
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
6.5
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
6.4
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
6.4
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
6.3
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
6.2
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
5.9
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
5.6
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
5.4
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
5.3
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
5.0
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
4.4
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
4.3
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
4.1
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
3.5
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
3.4
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RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0001340003
Tumor
0.7
CPT0086950003
Tumor
0.5
CPT0002350011
Tumor
0.5
CPT0002270011
Tumor
0.5
CPT0086820003
Tumor
0.5
CPT0025880003
Tumor
0.5
CPT0007320003
Tumor
0.5
CPT0081880003
Tumor
0.4
CPT0079270003
Tumor
0.4
CPT0010110003
Tumor
0.4
CPT0078830003
Tumor
0.4
CPT0088550004
Tumor
0.4
CPT0085670003
Tumor
0.4
CPT0000640003
Tumor
0.3
CPT0084560003
Tumor
0.3
CPT0065430003
Tumor
0.3
CPT0078800003
Tumor
0.3
CPT0015730003
Tumor
0.3
CPT0012280003
Tumor
0.3
CPT0001540009
Tumor
0.3
CPT0079410003
Tumor
0.2
CPT0019130003
Tumor
0.2
CPT0025110003
Tumor
0.2
CPT0075130003
Tumor
0.2
CPT0012180003
Tumor
0.2
CPT0001180009
Tumor
0.2
CPT0012370003
Tumor
0.2
CPT0089460004
Tumor
0.2
CPT0026410003
Tumor
0.2
CPT0076330003
Tumor
0.2
CPT0023350003
Tumor
0.2
CPT0001260009
Tumor
0.2
CPT0001190001
Normal
0.2
CPT0009060003
Tumor
0.2
CPT0012550003
Tumor
0.2
CPT0011410003
Tumor
0.2
CPT0078660003
Tumor
0.2
CPT0064370003
Tumor
0.2
CPT0079480003
Tumor
0.2
CPT0012900004
Tumor
0.1
CPT0012570003
Normal
0.1
CPT0012640003
Normal
0.1
CPT0065870003
Tumor
0.1
CPT0018250001
Normal
0.1
CPT0009000003
Tumor
0.1
CPT0086870003
Tumor
0.1
CPT0001500009
Tumor
0.1
CPT0078510003
Tumor
0.1
CPT0086360003
Tumor
0.1
CPT0076350001
Normal
0.1
CPT0088900003
Tumor
0.1
CPT0077110003
Tumor
0.1
CPT0079180003
Tumor
0.1
CPT0075570001
Normal
0.1
CPT0012090003
Normal
0.1
CPT0009080003
Normal
0.1
CPT0088970003
Tumor
0.1
CPT0015810003
Tumor
0.1
CPT0092160003
Tumor
0.1
CPT0017450001
Normal
0.1
CPT0012080003
Tumor
0.1
CPT0065810003
Tumor
0.1
CPT0069000003
Tumor
0.1
CPT0001220008
Tumor
0.1
CPT0001270001
Normal
0.1
CPT0025610001
Normal
0.1
CPT0065820001
Normal
0.1
CPT0001350001
Normal
0.1
CPT0012290003
Normal
0.1
CPT0088920001
Normal
0.1
CPT0017850003
Tumor
0.0
CPT0002370001
Normal
0.0
CPT0006440003
Tumor
0.0
CPT0010170001
Normal
0.0
CPT0012920003
Normal
0.0
CPT0078990003
Tumor
0.0
CPT0020120003
Tumor
0.0
CPT0013790003
Normal
0.0
CPT0069190001
Normal
0.0
CPT0088480003
Tumor
0.0
CPT0025170003
Tumor
0.0
CPT0092740003
Normal
0.0
CPT0025230003
Tumor
0.0
CPT0092190003
Normal
0.0
CPT0078840001
Normal
0.0
CPT0009020003
Normal
0.0
CPT0025060001
Normal
0.0
CPT0007870001
Normal
0.0
CPT0025050003
Tumor
0.0
CPT0001230001
Normal
0.0
CPT0010120001
Normal
0.0
CPT0000870016
Tumor
0.0
CPT0026420001
Normal
0.0
CPT0088500001
Normal
0.0
CPT0025350003
Tumor
0.0
CPT0063330001
Normal
0.0
CPT0092800003
Normal
0.0
CPT0063640001
Normal
0.0
CPT0079430001
Normal
0.0
CPT0000890001
Normal
0.0
CPT0078670001
Normal
0.0
CPT0000780007
Tumor
0.0
CPT0014350001
Normal
0.0
CPT0064400001
Normal
0.0
CPT0086830003
Normal
0.0
CPT0006630003
Tumor
0.0
CPT0006530001
Normal
0.0
CPT0082010001
Normal
0.0
CPT0012770003
Normal
0.0
CPT0024670003
Tumor
0.0
CPT0066430001
Normal
0.0
CPT0023360001
Normal
0.0
CPT0077140001
Normal
0.0
CPT0001550001
Normal
0.0
CPT0006730001
Normal
0.0
CPT0020130001
Normal
0.0
CPT0086370003
Normal
0.0
CPT0007860003
Tumor
0.0
CPT0011240003
Tumor
0.0
CPT0086970003
Normal
0.0
CPT0012670003
Tumor
0.0
CPT0071150004
Tumor
0.0
CPT0065450001
Normal
0.0
CPT0087040003
Tumor
0.0
CPT0092310003
Normal
0.0
CPT0089040001
Normal
0.0
CPT0079000001
Normal
0.0
CPT0023710001
Normal
0.0
CPT0063630003
Tumor
0.0
CPT0086890003
Normal
0.0
CPT0088710001
Normal
0.0
CPT0088570001
Normal
0.0
CPT0001510001
Normal
0.0
CPT0006950001
Normal
0.0
CPT0089020003
Tumor
0.0
CPT0079380003
Tumor
0.0
CPT0010160003
Tumor
0.0
CPT0025920001
Normal
0.0
CPT0000790001
Normal
0.0
CPT0078930003
Tumor
0.0
CPT0078940001
Normal
0.0
CPT0079510001
Normal
0.0
CPT0088780001
Normal
0.0
CPT0065750003
Tumor
0.0
CPT0075170001
Normal
-0.1
CPT0000660001
Normal
-0.1
CPT0088690003
Tumor
-0.1
CPT0066470004
Tumor
-0.1
CPT0088640003
Normal
-0.1
CPT0014160003
Tumor
-0.1
CPT0069010001
Normal
-0.1
CPT0092290003
Tumor
-0.1
CPT0084590001
Normal
-0.1
CPT0081620001
Normal
-0.1
CPT0087050003
Normal
-0.1
CPT0014450004
Tumor
-0.1
CPT0014130001
Normal
-0.1
CPT0006900003
Tumor
-0.1
CPT0077500001
Normal
-0.1
CPT0007470001
Normal
-0.1
CPT0089480003
Normal
-0.1
CPT0081990003
Tumor
-0.1
CPT0081600003
Tumor
-0.1
CPT0079230003
Tumor
-0.1
CPT0025290003
Tumor
-0.1
CPT0077310003
Tumor
-0.1
CPT0019160001
Normal
-0.1
CPT0079300001
Normal
-0.1
CPT0077490003
Tumor
-0.1
CPT0075720003
Tumor
-0.1
CPT0063320003
Tumor
-0.1
CPT0017410003
Tumor
-0.1
CPT0066480003
Tumor
-0.1
CPT0066520001
Normal
-0.1
CPT0025580004
Tumor
-0.1
CPT0021240003
Tumor
-0.1
CPT0078530001
Normal
-0.1
CPT0020020001
Normal
-0.1
CPT0086030003
Tumor
-0.1
CPT0014370004
Tumor
-0.1
CPT0077320001
Normal
-0.1
CPT0092790003
Tumor
-0.1
CPT0019990003
Tumor
-0.1
CPT0065930003
Tumor
-0.1
CPT0014470001
Normal
-0.1
CPT0015910003
Tumor
-0.1
CPT0088630003
Tumor
-0.1
CPT0092730003
Tumor
-0.2
CPT0024680001
Normal
-0.2
CPT0069160003
Tumor
-0.2
CPT0088760003
Tumor
-0.2
CPT0075560003
Tumor
-0.2
CPT0023690003
Tumor
-0.2
CPT0065690003
Tumor
-0.3
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
