HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:17.0 nTPM
HPA Brain:31.8 nTPM
GTEx:17.0 nTPM
FANTOM5:16.1 Scaled Tags Per Million
Pig:78.3 nTPM
Mouse:50.0 nTPM
Allen mouse:1.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA012884
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 31.8
Sample id Sample description nTPM
Hippocampus
nTPM: 31.2
2529 Female, age 94, left hemisphere 36.1
2148 Female, age 91, left hemisphere 34.0
1855 Male, age 76, left hemisphere 31.3
2621 Female, age 67, right hemisphere 30.5
1898 Male, age 80, left hemisphere 29.6
1911 Female, age 85, right hemisphere 25.9
Dentate gyrus
nTPM: 29.9
1927 Female, age 91, both hemispheres 35.9
2010 Male, age 76, both hemispheres 32.3
2531 Female, age 67, both hemispheres 29.1
2246 Female, age 85, both hemispheres 28.6
2528 Male, age 74, both hemispheres 28.5
2530 Female, age 94, left hemisphere 25.3
Entorhinal gyrus
nTPM: 26.6
2686 Male, age 75, right hemisphere 30.2
1938 Female, age 85, left hemisphere 29.2
2117 Female, age 91, right hemisphere 27.6
1787 Male, age 76, left hemisphere 26.9
2764 Male, age 80, right hemisphere 26.3
2613 Female, age 94, left hemisphere 19.4
Hippocampus, CA1
nTPM: 30.7
2045 Male, age 76, both hemispheres 41.4
1873 Female, age 85, both hemispheres 31.3
2527 Male, age 74, both hemispheres 30.8
2749 Male, age 80, left hemisphere 26.5
2082 Female, age 91, right hemisphere 23.2
Hippocampus, CA2
nTPM: 29.9
1892 Male, age 76, both hemispheres 37.2
1940 Female, age 85, left hemisphere 32.9
1963 Male, age 80, left hemisphere 30.4
2437 Female, age 94, left hemisphere 27.4
2249 Male, age 74, both hemispheres 26.1
2113 Female, age 91, right hemisphere 25.4
Hippocampus, CA3
nTPM: 30.1
1867 Male, age 76, both hemispheres 36.4
2620 Female, age 94, left hemisphere 35.2
2861 Female, age 67, both hemispheres 32.5
1891 Female, age 85, both hemispheres 27.7
2436 Male, age 74, both hemispheres 25.0
2137 Male, age 80, left hemisphere 24.1
Parahippocampal cortex
nTPM: 29.1
2692 Male, age 74, both hemispheres 32.7
2622 Female, age 67, right hemisphere 31.1
2693 Female, age 94, both hemispheres 30.7
2532 Female, age 72, left hemisphere 30.2
2018 Male, age 76, both hemispheres 29.4
1933 Female, age 85, both hemispheres 29.2
1850 Male, age 80, both hemispheres 28.9
1990 Female, age 91, right hemisphere 26.6
2250 Female, age 67, right hemisphere 26.3
2245 Female, age 91, both hemispheres 25.9
Perirhinal gyrus
nTPM: 31.8
1794 Male, age 80, right hemisphere 36.7
1841 Female, age 85, right hemisphere 32.8
2521 Female, age 94, right hemisphere 31.2
1847 Female, age 91, left hemisphere 29.5
2848 Male, age 76, right hemisphere 28.7
Subiculum
nTPM: 27.2
2438 Female, age 94, left hemisphere 32.5
2619 Male, age 74, both hemispheres 29.6
1977 Female, age 85, both hemispheres 27.6
2729 Female, age 91, right hemisphere 27.5
1901 Male, age 80, both hemispheres 23.2
2042 Male, age 76, both hemispheres 22.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 17.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 17.0
Samples: 197

Max nTPM: 30.6
Min nTPM: 8.1
Std nTPM: 3.8
Median nTPM: 16.8
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 30.6
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 28.0
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 27.2
GTEX-11GS4-0011-R1a-SM-DO129 60-69 years, male 26.7
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 26.5
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 25.8
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 24.9
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 24.8
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 24.6
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 24.0
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 23.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 16.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 16.1
FF:10153-102I9 76 years, female 18.8
FF:10169-103B7 60 years, female 13.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 78.3
Pig sample Sample description nTPM
Subiculum
nTPM: 53.4
Samples: 4

Max nTPM: 67.5
Min nTPM: 45.4
Sample A Female 67.5
Sample B Female 53.0
Sample C Male 47.6
Sample D Male 45.4
Dorsal hippocampus
nTPM: 78.3
Samples: 4

Max nTPM: 105.9
Min nTPM: 48.8
Sample A Female 105.9
Sample B Female 74.7
Sample C Male 83.9
Sample D Male 48.8
Entorhinal cortex
nTPM: 54.9
Samples: 4

Max nTPM: 62.5
Min nTPM: 49.4
Sample A Female 49.4
Sample B Female 62.5
Sample C Male 57.5
Sample D Male 50.0
Ventral hippocampus
nTPM: 63.7
Samples: 4

Max nTPM: 71.8
Min nTPM: 44.7
Sample A Female 67.9
Sample B Female 44.7
Sample C Male 70.5
Sample D Male 71.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 50.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 50.0
Samples: 4

Max nTPM: 54.0
Min nTPM: 46.8
Sample A Male 46.8
Sample B Male 50.9
Sample C Female 48.4
Sample D Female 54.0
Hippocampal formation
nTPM: 43.7
Samples: 4

Max nTPM: 47.6
Min nTPM: 41.4
Sample A Male 47.6
Sample B Male 43.6
Sample C Female 42.2
Sample D Female 41.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 1.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.3
74657931 Antisense, RP_060220_02_F10, Mouse strain C57BL/6J (56 days, male) 1.8
68919018 Antisense, RP_050301_02_D06, Mouse strain C57BL/6J (56 days, male) 0.7

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