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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HTRA2 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
6.7
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
28.1
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
18.7
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
14.8
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
14.8
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
13.9
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
13.7
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
13.4
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
13.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
12.7
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
12.7
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
12.4
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
11.6
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
11.2
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
10.4
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
8.4
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
8.2
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
7.9
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
7.8
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
7.4
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
7.1
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
6.8
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
6.7
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
6.6
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
6.5
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
6.5
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
6.5
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
6.4
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
5.8
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
5.8
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
5.7
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
5.7
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
5.7
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
5.6
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
5.5
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
5.4
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
5.4
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
5.3
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
5.3
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
5.2
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
5.2
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
5.2
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
5.1
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
5.1
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
4.9
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
4.7
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
4.6
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
4.6
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
4.5
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
4.1
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
4.1
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
4.1
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
3.8
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
3.6
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
3.3
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
1.6
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
0.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
0.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
0.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
0.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
0.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
0.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
0.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
0.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HTRA2 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
11.8
Number of samples
521
Samples
Sample
Description
TPM
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
39.6
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
29.0
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
27.5
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
27.0
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
26.6
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
26.3
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
24.7
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
24.1
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
23.9
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
23.8
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
23.4
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
23.3
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
23.2
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
23.2
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
22.9
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
22.5
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
22.5
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
22.4
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
22.3
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
22.2
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
22.1
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
22.0
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
21.9
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
21.7
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
21.4
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
21.4
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
20.9
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
20.9
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
20.8
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
20.8
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
20.7
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
20.7
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
20.4
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
20.2
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
20.0
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
19.8
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
19.7
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
19.7
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
19.7
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
19.7
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
19.4
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
19.4
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
19.3
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
19.3
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
19.2
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
19.0
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
19.0
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
19.0
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
18.9
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
18.9
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
18.7
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
18.7
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
18.5
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
18.5
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
18.4
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
18.3
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
18.3
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
18.2
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
18.1
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
18.1
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
18.1
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
18.1
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
18.0
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
18.0
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
17.9
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
17.9
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
17.7
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
17.6
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
17.6
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
17.6
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
17.6
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
17.5
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
17.5
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
17.3
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
17.3
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
17.2
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
17.2
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
17.1
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
17.0
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
17.0
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
17.0
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
17.0
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
16.9
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
16.9
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
16.9
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
16.9
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
16.9
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
16.8
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
16.7
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
16.7
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
16.5
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
16.5
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
16.4
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
16.4
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
16.4
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
16.4
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
16.4
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
16.3
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
16.3
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
16.3
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
16.2
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
16.2
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
16.2
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
16.1
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
16.1
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
16.0
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
15.9
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
15.9
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
15.9
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
15.8
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
15.8
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
15.8
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
15.7
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
15.7
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
15.7
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
15.7
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
15.7
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
15.5
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
15.5
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
15.5
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
15.5
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
15.4
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
15.4
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
15.4
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
15.4
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
15.4
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
15.3
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
15.2
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
15.2
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
15.2
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
15.1
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
15.0
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
15.0
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
15.0
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
15.0
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
15.0
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
15.0
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
14.9
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
14.9
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
14.9
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
14.8
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
14.8
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
14.8
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
14.7
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
14.7
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
14.6
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
14.6
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
14.6
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
14.5
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
14.5
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
14.5
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
14.4
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
14.3
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
14.3
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
14.3
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
14.3
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
14.2
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
14.2
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
14.1
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
14.1
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
14.1
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
14.1
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
14.1
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
14.0
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
14.0
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
13.9
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
13.9
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
13.9
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
13.8
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
13.8
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
13.8
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
13.8
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
13.8
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
13.7
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
13.5
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
13.5
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
13.5
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
13.5
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
13.4
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
13.4
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
13.4
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
13.4
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
13.4
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
13.3
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
13.3
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
13.3
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
13.3
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
13.3
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
13.3
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
13.3
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
13.2
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
13.2
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
13.2
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
13.2
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
13.1
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
13.1
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
13.1
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
13.1
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
13.0
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
13.0
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
13.0
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
13.0
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
13.0
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
12.9
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
12.9
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
12.9
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
12.9
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
12.8
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
12.8
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
12.8
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
12.8
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
12.7
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
12.7
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
12.7
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
12.7
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
12.7
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
12.7
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
12.6
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
12.6
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
12.6
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
12.6
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
12.6
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
12.5
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
12.5
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
12.5
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
12.5
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
12.4
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
12.4
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
12.3
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
12.3
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
12.3
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
12.3
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
12.3
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
12.3
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
12.2
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
12.2
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
12.2
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
12.2
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
12.2
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
12.2
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
12.1
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
12.1
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
12.1
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
12.0
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
12.0
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
11.9
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
11.9
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
11.9
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
11.9
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
11.9
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
11.9
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
11.8
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
11.8
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
11.8
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
11.8
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
11.7
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
11.7
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
11.7
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
11.7
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
11.7
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
11.7
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
11.6
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
11.6
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
11.6
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
11.6
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
11.6
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
11.6
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
11.6
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
11.6
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
11.5
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
11.5
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
11.5
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
11.5
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
11.5
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
11.4
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
11.3
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
11.3
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
11.2
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
11.2
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
11.2
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
11.2
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
11.1
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
11.1
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
11.0
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
11.0
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
11.0
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
11.0
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
11.0
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
11.0
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
10.9
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
10.9
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
10.9
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
10.9
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
10.9
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
10.8
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
10.8
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
10.8
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
10.8
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
10.7
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
10.7
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
10.7
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
10.7
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
10.7
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
10.7
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
10.7
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
10.6
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
10.6
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
10.6
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
10.6
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
10.6
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
10.6
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
10.6
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
10.5
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
10.5
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
10.5
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
10.5
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
10.4
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
10.4
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
10.4
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
10.4
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
10.4
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
10.3
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
10.3
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
10.2
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
10.2
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
10.2
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
10.2
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
10.2
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
10.1
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
10.1
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
10.1
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
10.0
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
10.0
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
9.9
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
9.9
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
9.8
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
9.8
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
9.7
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
9.7
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
9.7
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
9.6
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
9.6
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
9.6
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
9.6
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
9.6
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
9.5
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
9.5
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
9.5
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
9.5
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
9.5
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
9.4
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
9.4
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
9.3
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
9.3
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
9.2
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
9.2
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
9.1
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
9.1
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
9.1
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
9.1
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
9.1
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
9.1
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
9.1
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
9.0
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
9.0
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
8.8
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
8.8
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
8.8
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
8.5
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
8.5
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
8.5
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
8.4
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
8.4
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
8.4
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
8.3
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
8.2
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
8.2
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
8.2
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
8.2
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
8.2
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
8.1
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
8.1
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
8.1
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
8.1
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
8.1
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
8.0
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
8.0
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
8.0
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
7.9
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
7.9
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
7.8
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
7.8
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
7.8
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
7.8
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
7.7
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
7.7
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
7.6
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
7.6
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
7.6
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
7.6
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
7.5
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
7.5
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
7.5
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
7.5
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
7.5
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
7.5
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
7.5
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
7.3
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
7.2
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
7.2
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
7.2
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
7.1
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
7.1
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
7.1
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
7.1
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
7.1
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
7.1
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
7.1
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
7.0
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
7.0
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
7.0
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
6.9
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
6.9
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
6.9
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
6.9
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
6.9
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
6.9
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
6.9
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
6.8
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
6.8
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
6.8
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
6.7
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
6.7
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
6.7
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
6.6
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
6.6
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
6.6
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
6.6
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
6.5
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
6.4
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
6.4
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
6.3
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
6.3
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
6.3
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
6.3
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
6.3
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
6.3
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
6.1
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
6.1
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
6.0
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
6.0
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
6.0
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
6.0
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
5.8
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
5.8
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
5.8
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
5.7
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
5.7
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
5.7
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
5.6
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
5.6
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
5.5
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
5.5
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
5.5
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
5.5
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
5.5
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
5.4
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
5.4
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
5.4
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
5.3
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
5.3
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
5.1
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
5.1
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
5.1
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
5.0
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
5.0
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
4.9
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
4.7
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
4.7
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
4.7
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
4.6
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
4.5
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
4.5
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
4.4
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
4.4
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
4.4
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
4.2
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
4.2
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
4.1
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
4.0
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
3.9
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
3.9
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
3.9
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
3.9
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
3.9
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
3.9
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
3.8
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
3.8
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
3.7
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
3.7
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
3.6
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
3.6
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
3.6
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
3.4
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
3.4
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
3.3
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
3.1
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
2.9
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
2.8
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
2.7
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
2.6
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
2.3
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
2.3
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
2.0
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
1.7
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
1.6
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
1.4
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
1.4
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
1.3
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
1.1
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HTRA2 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
13.8
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
24.5
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
23.1
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
22.5
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
21.7
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
21.6
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
21.0
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
20.9
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
20.8
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
20.8
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
20.3
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
19.8
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
19.7
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
19.5
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
19.0
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
18.8
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
18.7
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
18.1
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
18.1
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
17.9
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
17.8
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
17.7
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
17.7
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
17.6
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
17.5
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
17.5
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
17.0
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
16.9
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
16.8
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
16.7
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
16.6
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
16.3
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
16.3
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
16.2
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
16.1
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
16.1
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
15.9
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
15.4
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
15.3
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
15.3
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
14.9
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
14.9
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
14.9
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
14.8
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
14.7
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
14.5
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
14.4
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
14.3
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
14.3
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
14.1
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
14.1
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
13.9
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
13.8
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
13.4
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
13.3
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
13.3
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
13.2
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
13.1
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
13.1
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
12.7
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
12.7
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
12.7
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
12.7
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
12.3
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
12.3
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
12.1
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
12.1
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
12.1
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
12.1
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
11.9
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
11.4
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
11.3
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
11.3
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
11.3
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
11.2
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
11.0
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
10.4
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
10.0
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
10.0
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
9.8
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
9.7
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
9.6
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
9.6
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
9.4
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
9.0
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
8.6
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
8.4
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
8.4
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
8.1
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
8.1
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
7.8
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
7.6
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
7.1
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
6.9
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
6.8
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
6.6
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
5.4
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
4.1
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
3.9
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
3.3
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HTRA2 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
14.7
Number of samples
282
Samples
Sample
Description
TPM
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
81.7
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
55.0
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
42.3
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
40.2
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
34.4
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
32.6
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
32.1
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
31.9
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
30.8
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
30.6
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
30.3
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
30.1
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
29.9
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
29.3
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
28.5
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
28.1
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
28.0
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
27.9
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
27.6
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
27.4
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
27.2
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
26.8
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
26.4
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
26.1
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
26.0
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
25.9
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
25.5
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
25.3
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
25.0
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
24.9
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
24.8
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
24.8
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
24.7
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
24.6
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
24.6
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
24.5
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
24.1
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
24.0
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
24.0
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
23.9
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
23.8
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
23.8
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
23.7
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
23.7
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
23.6
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
23.5
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
23.2
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
23.2
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
22.9
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
22.9
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
22.8
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
22.7
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
22.5
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
22.0
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
22.0
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
21.9
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
21.8
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
21.7
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
21.7
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
21.4
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
21.3
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
21.3
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
21.1
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
20.9
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
20.8
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
20.5
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
20.4
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
20.3
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
20.1
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
20.1
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
19.9
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
19.8
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
19.7
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
19.7
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
19.6
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
19.6
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
19.3
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
19.2
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
19.2
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
19.1
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
19.0
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
18.5
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
18.5
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
18.2
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
18.0
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
17.9
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
17.8
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
17.5
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
17.5
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
17.4
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
17.4
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
17.3
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
17.3
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
17.3
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
17.2
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
17.2
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
17.0
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
16.9
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
16.9
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
16.8
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
16.8
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
16.7
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
16.6
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
16.6
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
16.6
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
16.5
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
16.4
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
16.3
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
15.9
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
15.9
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
15.9
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
15.8
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
15.8
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
15.8
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
15.8
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
15.8
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
15.7
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
15.6
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
15.6
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
15.4
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
15.3
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
15.3
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
15.3
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
15.0
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
15.0
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
15.0
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
15.0
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
14.9
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
14.9
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
14.8
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
14.8
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
14.6
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
14.6
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
14.6
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
14.4
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
14.4
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
14.2
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
13.9
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
13.8
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
13.8
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
13.7
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
13.6
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
13.5
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
13.5
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
13.5
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
13.5
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
13.4
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
13.4
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
13.4
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
13.3
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
13.3
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
13.2
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
12.9
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
12.9
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
12.8
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
12.8
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
12.7
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
12.7
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
12.6
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
12.6
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
12.6
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
12.5
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
12.4
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
12.4
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
12.3
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
12.3
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
12.2
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
12.0
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
11.9
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
11.9
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
11.8
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
11.8
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
11.7
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
11.7
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
11.6
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
11.4
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
11.3
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
11.3
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
11.2
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
11.1
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
11.0
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
10.9
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
10.9
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
10.8
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
10.7
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
10.7
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
10.7
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
10.7
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
10.6
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
10.5
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
10.5
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
10.4
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
10.4
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
10.1
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
10.0
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
9.8
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
9.7
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
9.6
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
9.6
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
9.6
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
9.5
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
9.4
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
9.3
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
9.2
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
8.8
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
8.8
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
8.8
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
8.8
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
8.7
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
8.7
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
8.5
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
8.4
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
8.4
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
8.3
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
8.2
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
8.1
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
8.0
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
7.6
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
7.5
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
7.5
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
7.5
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
7.4
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
7.4
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
7.3
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
7.3
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
7.3
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
7.1
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
7.1
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
7.0
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
6.9
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
6.7
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
6.6
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
6.4
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
6.4
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
6.4
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
6.1
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
6.0
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
5.8
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
5.7
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
5.7
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
5.6
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
5.6
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
5.5
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
5.4
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
5.4
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
5.2
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
5.1
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
4.8
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
4.7
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
4.6
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
4.6
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
4.5
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
4.5
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
4.4
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
4.4
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
4.2
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
4.2
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
3.9
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
3.9
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
3.3
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
3.0
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
2.7
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
2.6
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
2.6
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
1.9
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
1.6
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
0.0
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
0.0
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
0.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
0.0
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
0.0
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
0.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
0.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
0.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
0.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
0.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
0.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
0.0
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
0.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
0.0
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0066430001
Normal
0.5
CPT0012770003
Normal
0.5
CPT0012900004
Tumor
0.5
CPT0014470001
Normal
0.4
CPT0002270011
Tumor
0.4
CPT0007860003
Tumor
0.4
CPT0020020001
Normal
0.4
CPT0088780001
Normal
0.4
CPT0087050003
Normal
0.4
CPT0001500009
Tumor
0.4
CPT0079000001
Normal
0.4
CPT0011240003
Tumor
0.4
CPT0078510003
Tumor
0.4
CPT0092310003
Normal
0.3
CPT0020120003
Tumor
0.3
CPT0013790003
Normal
0.3
CPT0006730001
Normal
0.3
CPT0012570003
Normal
0.3
CPT0009080003
Normal
0.3
CPT0081620001
Normal
0.3
CPT0025060001
Normal
0.3
CPT0088920001
Normal
0.3
CPT0014350001
Normal
0.3
CPT0000780007
Tumor
0.3
CPT0009060003
Tumor
0.3
CPT0025610001
Normal
0.3
CPT0006950001
Normal
0.2
CPT0081880003
Tumor
0.2
CPT0012290003
Normal
0.2
CPT0026420001
Normal
0.2
CPT0014130001
Normal
0.2
CPT0007870001
Normal
0.2
CPT0018250001
Normal
0.2
CPT0065450001
Normal
0.2
CPT0092290003
Tumor
0.2
CPT0025920001
Normal
0.2
CPT0078840001
Normal
0.2
CPT0023710001
Normal
0.2
CPT0023690003
Tumor
0.2
CPT0077310003
Tumor
0.2
CPT0001350001
Normal
0.2
CPT0092190003
Normal
0.2
CPT0023360001
Normal
0.1
CPT0012090003
Normal
0.1
CPT0075560003
Tumor
0.1
CPT0077140001
Normal
0.1
CPT0019160001
Normal
0.1
CPT0069010001
Normal
0.1
CPT0078530001
Normal
0.1
CPT0012670003
Tumor
0.1
CPT0088710001
Normal
0.1
CPT0065750003
Tumor
0.1
CPT0086890003
Normal
0.1
CPT0077490003
Tumor
0.1
CPT0006440003
Tumor
0.1
CPT0092740003
Normal
0.1
CPT0026410003
Tumor
0.1
CPT0077500001
Normal
0.1
CPT0092800003
Normal
0.1
CPT0021240003
Tumor
0.1
CPT0010170001
Normal
0.1
CPT0020130001
Normal
0.1
CPT0088900003
Tumor
0.1
CPT0000890001
Normal
0.1
CPT0010160003
Tumor
0.1
CPT0078940001
Normal
0.1
CPT0002370001
Normal
0.1
CPT0092790003
Tumor
0.1
CPT0088570001
Normal
0.1
CPT0000790001
Normal
0.1
CPT0024680001
Normal
0.1
CPT0012640003
Normal
0.1
CPT0000640003
Tumor
0.1
CPT0084560003
Tumor
0.1
CPT0076330003
Tumor
0.0
CPT0064400001
Normal
0.0
CPT0078830003
Tumor
0.0
CPT0006530001
Normal
0.0
CPT0086370003
Normal
0.0
CPT0088500001
Normal
0.0
CPT0088640003
Normal
0.0
CPT0075720003
Tumor
0.0
CPT0086970003
Normal
0.0
CPT0000660001
Normal
0.0
CPT0025170003
Tumor
0.0
CPT0001230001
Normal
0.0
CPT0076350001
Normal
0.0
CPT0079300001
Normal
0.0
CPT0064370003
Tumor
0.0
CPT0089460004
Tumor
0.0
CPT0086830003
Normal
0.0
CPT0081990003
Tumor
0.0
CPT0017450001
Normal
0.0
CPT0012920003
Normal
0.0
CPT0078800003
Tumor
0.0
CPT0063330001
Normal
0.0
CPT0001510001
Normal
0.0
CPT0063640001
Normal
0.0
CPT0085670003
Tumor
0.0
CPT0086030003
Tumor
0.0
CPT0087040003
Tumor
0.0
CPT0001550001
Normal
0.0
CPT0015730003
Tumor
0.0
CPT0079430001
Normal
-0.1
CPT0001190001
Normal
-0.1
CPT0006630003
Tumor
-0.1
CPT0084590001
Normal
-0.1
CPT0088630003
Tumor
-0.1
CPT0001540009
Tumor
-0.1
CPT0075570001
Normal
-0.1
CPT0065820001
Normal
-0.1
CPT0007470001
Normal
-0.1
CPT0078670001
Normal
-0.1
CPT0089040001
Normal
-0.1
CPT0078660003
Tumor
-0.1
CPT0069190001
Normal
-0.1
CPT0086870003
Tumor
-0.1
CPT0014370004
Tumor
-0.1
CPT0088970003
Tumor
-0.1
CPT0069160003
Tumor
-0.1
CPT0065810003
Tumor
-0.1
CPT0069000003
Tumor
-0.1
CPT0077110003
Tumor
-0.1
CPT0010120001
Normal
-0.1
CPT0071150004
Tumor
-0.1
CPT0015910003
Tumor
-0.1
CPT0006900003
Tumor
-0.1
CPT0082010001
Normal
-0.1
CPT0065690003
Tumor
-0.2
CPT0025880003
Tumor
-0.2
CPT0065930003
Tumor
-0.2
CPT0025110003
Tumor
-0.2
CPT0009020003
Normal
-0.2
CPT0017410003
Tumor
-0.2
CPT0014160003
Tumor
-0.2
CPT0014450004
Tumor
-0.2
CPT0019990003
Tumor
-0.2
CPT0066520001
Normal
-0.2
CPT0007320003
Tumor
-0.2
CPT0066480003
Tumor
-0.2
CPT0009000003
Tumor
-0.2
CPT0078930003
Tumor
-0.2
CPT0066470004
Tumor
-0.2
CPT0012080003
Tumor
-0.2
CPT0086360003
Tumor
-0.2
CPT0025290003
Tumor
-0.2
CPT0001270001
Normal
-0.2
CPT0025230003
Tumor
-0.2
CPT0075170001
Normal
-0.2
CPT0079270003
Tumor
-0.2
CPT0025050003
Tumor
-0.2
CPT0063630003
Tumor
-0.3
CPT0089020003
Tumor
-0.3
CPT0079510001
Normal
-0.3
CPT0012550003
Tumor
-0.3
CPT0081600003
Tumor
-0.3
CPT0012370003
Tumor
-0.3
CPT0079410003
Tumor
-0.3
CPT0077320001
Normal
-0.3
CPT0012280003
Tumor
-0.3
CPT0012180003
Tumor
-0.3
CPT0000870016
Tumor
-0.3
CPT0015810003
Tumor
-0.3
CPT0092160003
Tumor
-0.3
CPT0079180003
Tumor
-0.3
CPT0088690003
Tumor
-0.3
CPT0089480003
Normal
-0.4
CPT0065870003
Tumor
-0.4
CPT0001180009
Tumor
-0.4
CPT0001340003
Tumor
-0.4
CPT0079230003
Tumor
-0.4
CPT0086950003
Tumor
-0.4
CPT0079480003
Tumor
-0.4
CPT0024670003
Tumor
-0.4
CPT0086820003
Tumor
-0.4
CPT0025350003
Tumor
-0.4
CPT0079380003
Tumor
-0.4
CPT0063320003
Tumor
-0.4
CPT0001260009
Tumor
-0.4
CPT0025580004
Tumor
-0.4
CPT0088760003
Tumor
-0.5
CPT0002350011
Tumor
-0.5
CPT0001220008
Tumor
-0.5
CPT0092730003
Tumor
-0.5
CPT0010110003
Tumor
-0.5
CPT0088550004
Tumor
-0.5
CPT0017850003
Tumor
-0.5
CPT0075130003
Tumor
-0.5
CPT0019130003
Tumor
-0.5
CPT0088480003
Tumor
-0.6
CPT0065430003
Tumor
-0.6
CPT0023350003
Tumor
-0.7
CPT0078990003
Tumor
-0.8
CPT0011410003
Tumor
-1.0
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
