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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RPS15 is not prognostic in Ovary Serous Cystadenocarcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
2371.3
Number of samples
349
Samples
Sample
Description
TPM
TCGA-23-1022-01A
0 years, female, white, stage:Stage IIIC, dead, 1511 days
8799.5
TCGA-04-1341-01A
0 years, female, white, stage:'--, alive, 33 days
7345.8
TCGA-13-0923-01A
0 years, female, white, stage:Stage IIIC, alive, 2547 days
6416.9
TCGA-23-1109-01A
0 years, female, white, stage:Stage IIIC, dead, 1562 days
6377.8
TCGA-10-0927-01A
0 years, female, stage:Stage IIIC, dead, 2490 days
5589.4
TCGA-13-0897-01A
0 years, female, white, stage:Stage IIIC, dead, 2182 days
5453.7
TCGA-23-1113-01A
0 years, female, white, stage:Stage IV, dead, 949 days
5416.5
TCGA-04-1347-01A
0 years, female, white, stage:Stage IV, alive, 1919 days
5160.9
TCGA-04-1350-01A
0 years, female, white, stage:Stage IIIC, dead, 1946 days
5075.1
TCGA-04-1343-01A
0 years, female, white, stage:Stage IV, dead, 361 days
4947.5
TCGA-29-1690-01A
0 years, female, white, stage:Stage IIIC, dead, 1448 days
4852.2
TCGA-10-0938-01A
0 years, female, white, stage:Stage IIIC, dead, 636 days
4825.2
TCGA-30-1861-01A
0 years, female, white, stage:Stage IIIC, dead, 1058 days
4783.9
TCGA-13-0924-01A
0 years, female, white, stage:Stage IV, alive, 2614 days
4710.3
TCGA-61-2092-01A
0 years, female, white, stage:Stage IIIC, alive, 1573 days
4709.1
TCGA-10-0937-01A
0 years, female, white, stage:Stage IIIC, dead, 608 days
4705.0
TCGA-61-1721-01A
0 years, female, white, stage:Stage IV, alive, 338 days
4551.8
TCGA-13-0724-01A
0 years, female, white, stage:Stage IV, dead, 83 days
4417.0
TCGA-25-1328-01A
0 years, female, white, stage:Stage IIIC, dead, 2009 days
4412.0
TCGA-24-2038-01A
0 years, female, white, stage:Stage IIIA, dead, 1354 days
4404.7
TCGA-29-2425-01A
0 years, female, white, stage:Stage IIIC, alive, 1977 days
4401.0
TCGA-10-0931-01A
0 years, female, white, stage:Stage IIIC, dead, 1000 days
4373.7
TCGA-13-0887-01A
0 years, female, white, stage:Stage IIIC, dead, 2028 days
4359.7
TCGA-13-1477-01A
0 years, female, white, stage:Stage IV, dead, 1662 days
4320.7
TCGA-24-1553-01A
0 years, female, white, stage:Stage IIIB, dead, 1767 days
4237.2
TCGA-24-1431-01A
0 years, female, white, stage:Stage IIIC, dead, 583 days
4222.6
TCGA-13-0804-01A
0 years, female, white, stage:Stage IIIC, dead, 1073 days
4127.0
TCGA-61-1910-01A
0 years, female, white, stage:Stage IIC, alive, 1127 days
4119.7
TCGA-23-1027-01A
0 years, female, white, stage:Stage IIIC, dead, 976 days
4112.1
TCGA-13-0727-01A
0 years, female, white, stage:Stage IIIC, dead, 462 days
4069.3
TCGA-20-1682-01A
0 years, female, white, stage:Stage IIIC, alive, 837 days
4012.1
TCGA-09-2048-01A
0 years, female, white, stage:Stage IIIC, dead, 138 days
3970.9
TCGA-09-0364-01A
0 years, female, white, stage:Stage IIC, dead, 887 days
3955.2
TCGA-24-0966-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 232 days
3927.4
TCGA-57-1583-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 346 days
3926.4
TCGA-25-1316-01A
0 years, female, white, stage:Stage IIIC, dead, 1279 days
3893.5
TCGA-25-1634-01A
0 years, female, white, stage:Stage IIIC, dead, 1091 days
3863.3
TCGA-23-1030-01A
0 years, female, white, stage:Stage IIIC, alive, 886 days
3778.3
TCGA-23-1024-01A
0 years, female, white, stage:Stage IV, alive, 468 days
3734.1
TCGA-13-1489-01A
0 years, female, white, stage:Stage IIIC, dead, 2553 days
3613.2
TCGA-09-0367-01A
0 years, female, native hawaiian or other pacific islander, stage:Stage IIIC, dead, 547 days
3603.9
TCGA-13-1495-01A
0 years, female, white, stage:Stage IIIC, dead, 2749 days
3533.2
TCGA-24-1471-01A
0 years, female, white, stage:Stage IIIC, alive, 36 days
3510.7
TCGA-13-1404-01A
0 years, female, white, stage:Stage IIIC, alive, 2469 days
3482.7
TCGA-29-1761-01A
0 years, female, asian, stage:Stage IIIC, dead, 528 days
3452.2
TCGA-29-1701-01A
0 years, female, white, stage:Stage IIIC, dead, 515 days
3451.6
TCGA-24-1464-01A
0 years, female, white, stage:Stage IIIC, dead, 379 days
3438.7
TCGA-25-2393-01A
0 years, female, white, stage:Stage IIIC, dead, 1157 days
3433.1
TCGA-25-1317-01A
0 years, female, white, stage:Stage IIIC, dead, 61 days
3358.6
TCGA-13-0726-01A
0 years, female, white, stage:Stage IIIC, dead, 949 days
3355.1
TCGA-24-1603-01A
0 years, female, white, stage:Stage IIIB, dead, 2742 days
3352.5
TCGA-30-1714-01A
0 years, female, white, stage:Stage IV, dead, 1158 days
3322.3
TCGA-04-1542-01A
0 years, female, white, stage:Stage IIIB, dead, 2561 days
3307.4
TCGA-23-1116-01A
0 years, female, white, stage:Stage IIIC, dead, 592 days
3268.4
TCGA-24-1558-01A
0 years, female, white, stage:Stage IIIC, dead, 594 days
3261.1
TCGA-09-1662-01A
0 years, female, white, stage:Stage IV, dead, 2717 days
3246.1
TCGA-61-2008-01A
0 years, female, asian, stage:Stage IIC, alive, 932 days
3240.8
TCGA-13-0883-01A
0 years, female, white, stage:Stage IIIC, dead, 2097 days
3216.6
TCGA-13-0725-01A
0 years, female, white, stage:Stage IIIC, dead, 377 days
3138.2
TCGA-30-1892-01A
0 years, female, white, stage:Stage IIIC, dead, 1484 days
3136.7
TCGA-13-1408-01A
0 years, female, white, stage:Stage IIIC, dead, 1680 days
3131.4
TCGA-24-1428-01A
0 years, female, white, stage:Stage IIIC, alive, 529 days
3114.9
TCGA-24-1842-01A
0 years, female, white, stage:Stage IIIC, alive, 253 days
3095.7
TCGA-29-1688-01A
0 years, female, white, stage:Stage IIIC, dead, 2400 days
3082.5
TCGA-24-1604-01A
0 years, female, white, stage:Stage IIIC, dead, 2688 days
3082.1
TCGA-13-0911-01A
0 years, female, white, stage:Stage IV, dead, 1355 days
3079.6
TCGA-29-1770-01A
0 years, female, white, stage:Stage IIIC, alive, 741 days
3046.7
TCGA-04-1362-01A
0 years, female, white, stage:Stage IIC, dead, 1348 days
3038.4
TCGA-13-1507-01A
0 years, female, white, stage:Stage IIIC, dead, 1993 days
3033.9
TCGA-24-1567-01A
0 years, female, white, stage:Stage IIIB, dead, 524 days
3029.5
TCGA-59-2355-01A
0 years, female, white, stage:Stage IV, dead, 65 days
3004.3
TCGA-13-0765-01A
0 years, female, white, stage:Stage IIIC, dead, 1389 days
2995.5
TCGA-24-2023-01A
0 years, female, white, stage:Stage IIIA, dead, 1364 days
2939.2
TCGA-24-1923-01A
0 years, female, white, stage:Stage IIIC, dead, 690 days
2935.2
TCGA-61-1733-01A
0 years, female, white, stage:Stage IIIC, alive, 967 days
2909.9
TCGA-25-1633-01A
0 years, female, white, stage:Stage IIIC, dead, 1891 days
2909.8
TCGA-20-0987-01A
0 years, female, white, stage:Stage IIIC, dead, 701 days
2891.9
TCGA-13-1485-01A
0 years, female, white, stage:Stage IV, dead, 629 days
2889.2
TCGA-30-1853-01A
0 years, female, white, stage:Stage IIIC, dead, 1103 days
2888.8
TCGA-13-0795-01A
0 years, female, white, stage:Stage IIIC, dead, 619 days
2871.9
TCGA-24-1427-01A
0 years, female, stage:Stage IIIC, alive, 147 days
2859.8
TCGA-61-1998-01A
0 years, female, white, stage:Stage IIIC, alive, 168 days
2847.8
TCGA-30-1891-01A
0 years, female, white, stage:Stage IIIC, dead, 914 days
2842.5
TCGA-29-1703-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1815 days
2839.1
TCGA-30-1862-01A
0 years, female, white, stage:Stage IV, dead, 186 days
2828.6
TCGA-61-2110-01A
0 years, female, white, stage:Stage IIIC, dead, 1354 days
2816.9
TCGA-61-2009-01A
0 years, female, white, stage:Stage IIIC, alive, 1212 days
2796.9
TCGA-24-1846-01A
0 years, female, stage:Stage IIIC, alive, 133 days
2786.1
TCGA-13-1409-01A
0 years, female, white, stage:Stage IIIC, dead, 1742 days
2773.8
TCGA-13-1483-01A
0 years, female, white, stage:Stage IIIC, dead, 895 days
2770.5
TCGA-29-1769-01A
0 years, female, white, stage:Stage IIIC, alive, 699 days
2758.0
TCGA-24-1560-01A
0 years, female, white, stage:Stage IIIC, dead, 1341 days
2743.1
TCGA-09-1669-01A
0 years, female, white, stage:Stage IIIA, alive, 928 days
2741.9
TCGA-23-1110-01A
0 years, female, white, stage:Stage IIIC, alive, 1658 days
2732.0
TCGA-23-1107-01A
0 years, female, white, stage:Stage IV, dead, 9 days
2711.5
TCGA-13-1497-01A
0 years, female, white, stage:Stage IIIC, alive, 3871 days
2710.9
TCGA-24-2271-01A
0 years, female, asian, stage:Stage IIIC, dead, 962 days
2708.8
TCGA-29-1768-01A
0 years, female, white, stage:Stage IV, dead, 952 days
2692.8
TCGA-24-2254-01A
0 years, female, white, stage:Stage IIIC, dead, 1736 days
2640.8
TCGA-13-1501-01A
0 years, female, white, stage:Stage IV, dead, 1314 days
2623.0
TCGA-24-2033-01A
0 years, female, white, stage:Stage IIIC, dead, 562 days
2607.1
TCGA-13-0891-01A
0 years, female, white, stage:Stage IV, dead, 3128 days
2606.7
TCGA-23-1023-01A
0 years, female, white, stage:Stage IIIC, alive, 1233 days
2606.6
TCGA-20-1687-01A
0 years, female, white, stage:Stage IV, alive, 81 days
2605.7
TCGA-25-1318-01A
0 years, female, white, stage:Stage IIIC, dead, 1064 days
2602.1
TCGA-36-1571-01A
0 years, female, white, stage:Stage IIIB, dead, 695 days
2598.3
TCGA-24-1413-01A
0 years, female, white, stage:Stage IIIC, alive, 192 days
2575.0
TCGA-24-1418-01A
0 years, female, white, stage:Stage IIIC, alive, 243 days
2540.6
TCGA-24-1930-01A
0 years, female, white, stage:Stage IIIC, dead, 2467 days
2539.9
TCGA-24-1616-01A
0 years, female, white, stage:Stage IIIC, dead, 1163 days
2539.4
TCGA-24-0982-01A
0 years, female, white, stage:Stage IIIC, dead, 679 days
2521.6
TCGA-24-1845-01A
0 years, female, white, stage:Stage IIIC, alive, 116 days
2517.4
TCGA-09-1673-01A
0 years, female, white, stage:Stage IV, alive, 92 days
2506.7
TCGA-25-1312-01A
0 years, female, white, stage:Stage IV, dead, 31 days
2501.2
TCGA-24-1417-01A
0 years, female, white, stage:Stage IV, alive, 238 days
2497.3
TCGA-61-1728-01A
0 years, female, white, stage:Stage IV, alive, 848 days
2495.6
TCGA-61-1737-01A
0 years, female, white, stage:Stage IV, alive, 1364 days
2486.1
TCGA-23-1028-01A
0 years, female, white, stage:Stage IIIC, alive, 1503 days
2485.1
TCGA-04-1519-01A
0 years, female, stage:Stage IIIC, alive, 24 days
2478.3
TCGA-59-2363-01A
0 years, female, asian, stage:Stage IIIA, alive, 165 days
2476.1
TCGA-30-1857-01A
0 years, female, white, stage:Stage IV, dead, 8 days
2465.6
TCGA-13-A5FT-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 2143 days
2448.1
TCGA-09-1670-01A
0 years, female, white, stage:Stage IIIA, alive, 547 days
2448.0
TCGA-10-0928-01A
0 years, female, white, stage:Stage IIIC, dead, 563 days
2436.5
TCGA-29-1696-01A
0 years, female, white, stage:Stage IIIC, dead, 1032 days
2433.5
TCGA-24-1565-01A
0 years, female, white, stage:Stage IIIC, dead, 312 days
2431.7
TCGA-13-1509-01A
0 years, female, white, stage:Stage IV, alive, 2438 days
2426.7
TCGA-04-1655-01A
0 years, female, white, stage:Stage IIIB, dead, 1380 days
2426.4
TCGA-13-0920-01A
0 years, female, white, stage:Stage IIIC, dead, 1484 days
2413.5
TCGA-24-1562-01A
0 years, female, white, stage:Stage IIIC, dead, 1384 days
2412.6
TCGA-29-1777-01A
0 years, female, white, stage:Stage IIIC, alive, 374 days
2412.5
TCGA-25-1313-01A
0 years, female, white, stage:Stage IV, dead, 820 days
2383.7
TCGA-24-2261-01A
0 years, female, white, stage:Stage IIIC, dead, 24 days
2383.4
TCGA-61-1918-01A
0 years, female, white, stage:Stage IV, dead, 479 days
2377.8
TCGA-13-1510-01A
0 years, female, white, stage:Stage IIIC, dead, 1359 days
2375.9
TCGA-61-1725-01A
0 years, female, white, stage:Stage IIIC, alive, 956 days
2364.4
TCGA-09-1666-01A
0 years, female, white, stage:Stage IIIC, alive, 1752 days
2360.8
TCGA-13-0762-01A
0 years, female, white, stage:Stage IIIC, alive, 3400 days
2356.2
TCGA-61-2101-01A
0 years, female, white, stage:Stage IIIC, dead, 1688 days
2353.2
TCGA-04-1338-01A
0 years, female, white, stage:Stage IIIC, alive, 1418 days
2334.4
TCGA-24-1467-01A
0 years, female, white, stage:Stage IIIC, dead, 3224 days
2332.8
TCGA-61-1907-01A
0 years, female, white, stage:Stage IIIC, alive, 952 days
2327.2
TCGA-25-1632-01A
0 years, female, white, stage:Stage IV, dead, 1799 days
2313.0
TCGA-25-2396-01A
0 years, female, white, stage:Stage IIIC, dead, 92 days
2311.2
TCGA-57-1582-01A
0 years, female, white, stage:Stage IIIC, dead, 731 days
2301.5
TCGA-24-1419-01A
0 years, female, white, stage:Stage IIIC, alive, 239 days
2296.1
TCGA-24-2024-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1769 days
2291.9
TCGA-23-1123-01A
0 years, female, white, stage:Stage IIIC, dead, 1018 days
2290.7
TCGA-13-1487-01A
0 years, female, white, stage:Stage IV, dead, 681 days
2289.4
TCGA-25-1631-01A
0 years, female, white, stage:Stage IIIC, dead, 9 days
2273.1
TCGA-61-1914-01A
0 years, female, stage:Stage IIIC, alive, 1722 days
2267.1
TCGA-25-1329-01A
0 years, female, white, stage:Stage IIIC, dead, 457 days
2265.8
TCGA-04-1361-01A
0 years, female, white, stage:Stage IIIB, alive, 989 days
2262.7
TCGA-36-1577-01A
0 years, female, asian, stage:Stage IIC, alive, 783 days
2248.7
TCGA-29-1785-01A
0 years, female, white, stage:Stage IIIC, dead, 1104 days
2238.7
TCGA-13-1496-01A
0 years, female, white, stage:Stage IIIC, dead, 129 days
2227.8
TCGA-04-1651-01A
0 years, female, white, stage:Stage IIIC, dead, 1102 days
2220.8
TCGA-24-1550-01A
0 years, female, white, stage:Stage IIIC, dead, 1249 days
2213.0
TCGA-36-1574-01A
0 years, female, asian, stage:Stage IIIC, alive, 686 days
2212.5
TCGA-61-2002-01A
0 years, female, white, stage:Stage IIIC, alive, 547 days
2207.8
TCGA-25-1630-01A
0 years, female, white, stage:Stage IIIC, dead, 1162 days
2200.3
TCGA-29-1783-01A
0 years, female, white, stage:Stage IIIC, alive, 220 days
2196.6
TCGA-13-0797-01A
0 years, female, white, stage:Stage IIIC, alive, 2121 days
2189.5
TCGA-04-1365-01A
0 years, female, white, stage:Stage IIIB, alive, 947 days
2186.9
TCGA-29-1697-01A
0 years, female, white, stage:Stage IIIC, dead, 949 days
2186.0
TCGA-31-1944-01A
0 years, female, white, stage:Stage IIIC, alive, 1386 days
2178.7
TCGA-23-1119-01A
0 years, female, white, stage:Stage IIIC, alive, 3953 days
2172.6
TCGA-31-1946-01A
0 years, female, stage:Stage IIIC, alive, 918 days
2168.1
TCGA-24-1423-01A
0 years, female, white, stage:Stage IIIC, alive, 190 days
2166.9
TCGA-59-2350-01A
0 years, female, stage:Stage IV, dead, 679 days
2166.3
TCGA-13-0916-01A
0 years, female, white, stage:Stage IIIC, alive, 1785 days
2160.0
TCGA-23-1118-01A
0 years, female, white, stage:Stage IIIC, alive, 2616 days
2159.1
TCGA-13-0730-01A
0 years, female, white, stage:Stage IIIC, dead, 542 days
2149.9
TCGA-25-1326-01A
0 years, female, white, stage:Stage IIIC, dead, 1249 days
2145.7
TCGA-24-2290-01A
0 years, female, white, stage:Stage IIIC, dead, 1102 days
2144.5
TCGA-20-0991-01A
0 years, female, white, stage:Stage IIB, alive, 797 days
2143.6
TCGA-30-1860-01A
0 years, female, white, stage:Stage IIIC, dead, 1366 days
2136.9
TCGA-24-0968-01A
0 years, female, white, stage:Stage IIIC, dead, 598 days
2135.1
TCGA-30-1718-01A
0 years, female, white, stage:Stage IIIC, dead, 1579 days
2133.3
TCGA-13-0906-01A
0 years, female, white, stage:Stage IIIC, alive, 3619 days
2123.7
TCGA-24-1416-01A
0 years, female, white, stage:Stage IV, alive, 194 days
2113.4
TCGA-25-1877-01A
0 years, female, white, stage:Stage IIIC, dead, 730 days
2111.0
TCGA-13-0766-01A
0 years, female, white, stage:Stage IIIC, dead, 1725 days
2106.1
TCGA-24-1103-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1646 days
2103.9
TCGA-61-2109-01A
0 years, female, white, stage:Stage IIIC, dead, 629 days
2093.9
TCGA-59-A5PD-01A
0 years, female, black or african american, stage:Stage IC, dead, 624 days
2085.2
TCGA-24-2267-01A
0 years, female, white, stage:Stage IIB, dead, 1446 days
2084.9
TCGA-23-2078-01A
0 years, female, white, stage:Stage IIIC, alive, 2661 days
2081.0
TCGA-24-1435-01A
0 years, female, white, stage:Stage IIIC, dead, 1324 days
2078.3
TCGA-36-1576-01A
0 years, female, stage:Stage IIIC, alive, 915 days
2051.5
TCGA-25-2401-01A
0 years, female, white, stage:Stage IIIC, dead, 90 days
2045.1
TCGA-24-1544-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 820 days
2040.7
TCGA-04-1356-01A
0 years, female, white, stage:Stage IIC, dead, 1499 days
2039.7
TCGA-31-1953-01A
0 years, female, asian, stage:Stage IIIC, alive, 204 days
2032.2
TCGA-24-1426-01A
0 years, female, white, stage:Stage IIIC, alive, 163 days
2022.4
TCGA-13-1488-01A
0 years, female, white, stage:Stage IV, dead, 2154 days
2012.2
TCGA-20-1686-01A
0 years, female, white, stage:Stage IIIC, alive, 89 days
2007.3
TCGA-23-2077-01A
0 years, female, white, stage:Stage IIIC, alive, 3525 days
2004.1
TCGA-36-1569-01A
0 years, female, white, stage:Stage IIIC, alive, 885 days
2001.7
TCGA-24-2281-01A
0 years, female, white, stage:Stage IIA, alive, 1357 days
1999.4
TCGA-57-1584-01A
0 years, female, white, stage:Stage IIIC, alive, 643 days
1992.4
TCGA-61-2000-01A
0 years, female, white, stage:Stage IIIC, alive, 441 days
1992.4
TCGA-25-1321-01A
0 years, female, white, stage:Stage IIIC, dead, 1033 days
1988.1
TCGA-13-1505-01A
0 years, female, white, stage:Stage IIIC, alive, 1998 days
1967.2
TCGA-59-2352-01A
0 years, female, white, stage:Stage IIIC, dead, 286 days
1966.7
TCGA-36-1568-01A
0 years, female, stage:Stage IIIC, alive, 875 days
1958.7
TCGA-13-1411-01A
0 years, female, white, stage:Stage IIIC, dead, 531 days
1930.7
TCGA-13-1403-01A
0 years, female, white, stage:Stage IIIC, dead, 2345 days
1928.0
TCGA-29-1766-01A
0 years, female, white, stage:Stage IIIC, dead, 1199 days
1915.7
TCGA-25-2392-01A
0 years, female, white, stage:Stage IV, dead, 31 days
1898.5
TCGA-24-2297-01A
0 years, female, white, stage:Stage IIIC, dead, 1699 days
1893.9
TCGA-61-1995-01A
0 years, female, white, stage:Stage IIIC, alive, 61 days
1891.5
TCGA-25-2400-01A
0 years, female, white, stage:Stage IIIC, dead, 1278 days
1889.6
TCGA-24-1850-01A
0 years, female, white, stage:Stage IIIC, alive, 168 days
1888.1
TCGA-29-1784-01A
0 years, female, white, stage:Stage IIIC, alive, 163 days
1884.7
TCGA-25-1323-01A
0 years, female, white, stage:Stage IIIC, dead, 395 days
1873.3
TCGA-29-1776-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 360 days
1871.5
TCGA-13-1512-01A
0 years, female, white, stage:Stage IIIC, alive, 442 days
1870.7
TCGA-29-1705-01A
0 years, female, white, stage:Stage IIIC, dead, 555 days
1866.9
TCGA-24-1474-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 676 days
1865.6
TCGA-61-2097-01A
0 years, female, white, stage:Stage IIC, alive, 1844 days
1861.7
TCGA-25-1870-01A
0 years, female, white, stage:Stage IIIC, dead, 455 days
1859.4
TCGA-29-1694-01A
0 years, female, white, stage:Stage IIIC, dead, 1187 days
1852.6
TCGA-25-1627-01A
0 years, female, white, stage:Stage IIIC, dead, 394 days
1847.6
TCGA-61-1900-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 176 days
1839.4
TCGA-13-0886-01A
0 years, female, white, stage:Stage IIIC, alive, 4665 days
1833.6
TCGA-24-1924-01A
0 years, female, white, stage:Stage IIIC, dead, 919 days
1817.9
TCGA-13-1492-01A
0 years, female, white, stage:Stage IIIC, dead, 3819 days
1813.1
TCGA-09-2051-01A
0 years, female, white, stage:Stage IIIC, alive, 1919 days
1810.7
TCGA-29-1762-01A
0 years, female, white, stage:Stage IV, dead, 2634 days
1794.8
TCGA-23-2084-01A
0 years, female, white, stage:Stage IV, dead, 1516 days
1793.5
TCGA-09-2054-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 637 days
1792.2
TCGA-29-1763-01A
0 years, female, black or african american, stage:Stage IIC, alive, 2032 days
1789.6
TCGA-31-1956-01A
0 years, female, white, stage:Stage IIIB, alive, 1342 days
1787.3
TCGA-61-1911-01A
0 years, female, white, stage:Stage IIA, alive, 1293 days
1787.2
TCGA-13-1498-01A
0 years, female, white, stage:Stage IIIC, dead, 2012 days
1783.1
TCGA-13-2060-01A
0 years, female, white, stage:Stage IV, alive, 2369 days
1772.4
TCGA-36-1570-01A
0 years, female, white, stage:Stage IIIC, alive, 655 days
1766.9
TCGA-24-1546-01A
0 years, female, white, stage:Stage IIIC, dead, 1955 days
1766.2
TCGA-24-1847-01A
0 years, female, white, stage:Stage IV, alive, 343 days
1758.6
TCGA-13-1410-01A
0 years, female, white, stage:Stage IV, alive, 2464 days
1756.6
TCGA-25-1315-01A
0 years, female, white, stage:Stage IIIC, dead, 1583 days
1754.1
TCGA-13-0885-01A
0 years, female, white, stage:Stage IIIC, alive, 3388 days
1743.3
TCGA-WR-A838-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 304 days
1740.1
TCGA-24-0979-01A
0 years, female, white, stage:Stage IV, dead, 1264 days
1736.4
TCGA-59-2351-01A
0 years, female, white, stage:Stage IIIC, alive, 3532 days
1732.8
TCGA-09-0366-01A
0 years, female, white, stage:Stage IIIC, dead, 1757 days
1726.7
TCGA-20-1683-01A
0 years, female, white, stage:Stage IIIC, alive, 772 days
1725.8
TCGA-24-1563-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1451 days
1720.4
TCGA-24-1105-01A
0 years, female, white, stage:Stage IIIC, dead, 1442 days
1716.2
TCGA-13-1499-01A
0 years, female, white, stage:Stage IIIC, alive, 3500 days
1708.0
TCGA-25-2404-01A
0 years, female, american indian or alaska native, stage:Stage IIIC, dead, 883 days
1695.7
TCGA-04-1364-01A
0 years, female, white, stage:Stage IIIC, dead, 1024 days
1691.4
TCGA-13-0800-01A
0 years, female, white, stage:Stage IIIC, alive, 2661 days
1687.9
TCGA-24-1425-01A
0 years, female, white, stage:Stage IIIC, alive, 181 days
1684.3
TCGA-30-1866-01A
0 years, female, white, stage:Stage IV, dead, 1114 days
1683.4
TCGA-61-1919-01A
0 years, female, white, stage:Stage IIIC, dead, 1161 days
1681.7
TCGA-04-1332-01A
0 years, female, white, stage:Stage IIIC, dead, 1247 days
1677.6
TCGA-23-1122-01A
0 years, female, white, stage:Stage IIIC, dead, 1189 days
1673.9
TCGA-24-1843-01A
0 years, female, white, stage:Stage IIIC, alive, 106 days
1670.3
TCGA-57-1586-01A
0 years, female, white, stage:Stage IIIC, alive, 679 days
1666.3
TCGA-29-1778-01A
0 years, female, white, stage:Stage IIIC, alive, 454 days
1661.6
TCGA-24-1422-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 23 days
1657.5
TCGA-25-2409-01A
0 years, female, white, stage:Stage IV, dead, 821 days
1656.0
TCGA-61-1738-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1089 days
1653.3
TCGA-23-1809-01A
0 years, female, white, stage:Stage IIC, alive, 16 days
1634.7
TCGA-VG-A8LO-01A
0 years, female, black or african american, stage:Stage IV, dead, 24 days
1630.7
TCGA-25-2042-01A
0 years, female, american indian or alaska native, stage:Stage IIIC, dead, 396 days
1629.8
TCGA-24-1104-01A
0 years, female, white, stage:Stage IV, dead, 1933 days
1627.3
TCGA-57-1585-01A
0 years, female, white, stage:Stage IIIC, dead, 53 days
1623.8
TCGA-57-1994-01A
0 years, female, white, stage:'--, alive, 761 days
1623.7
TCGA-29-1693-01A
0 years, female, white, stage:Stage IIIC, alive, 3096 days
1618.9
TCGA-13-1405-01A
0 years, female, white, stage:Stage IV, dead, 868 days
1606.1
TCGA-24-1434-01A
0 years, female, white, stage:Stage IIIC, dead, 568 days
1586.1
TCGA-24-1552-01A
0 years, female, white, stage:Stage IIIC, dead, 1259 days
1581.9
TCGA-23-1111-01A
0 years, female, white, stage:Stage IIIC, alive, 98 days
1578.3
TCGA-25-2398-01A
0 years, female, white, stage:Stage IIIC, dead, 1369 days
1574.2
TCGA-09-0369-01A
0 years, female, white, stage:Stage IIIC, dead, 1082 days
1564.4
TCGA-24-1557-01A
0 years, female, white, stage:Stage IIIC, dead, 1213 days
1556.9
TCGA-25-1626-01A
0 years, female, white, stage:Stage IIIC, dead, 518 days
1545.9
TCGA-04-1331-01A
0 years, female, white, stage:Stage IIIC, dead, 1336 days
1542.2
TCGA-24-1430-01A
0 years, female, white, stage:Stage IIIC, dead, 863 days
1521.3
TCGA-24-2035-01A
0 years, female, white, stage:Stage IIIC, dead, 857 days
1520.7
TCGA-29-2427-01A
0 years, female, white, stage:Stage IIIC, alive, 1900 days
1520.2
TCGA-25-1322-01A
0 years, female, white, stage:Stage IV, dead, 91 days
1506.0
TCGA-25-1623-01A
0 years, female, white, stage:Stage IV, dead, 565 days
1504.4
TCGA-13-0888-01A
0 years, female, white, stage:Stage IIIC, dead, 2811 days
1504.3
TCGA-25-1320-01A
0 years, female, white, stage:Stage IIIC, dead, 1155 days
1500.6
TCGA-24-1549-01A
0 years, female, white, stage:Stage IIIB, dead, 1721 days
1494.8
TCGA-24-1424-01A
0 years, female, white, stage:Stage IIIC, alive, 183 days
1492.8
TCGA-25-2399-01A
0 years, female, white, stage:Stage IIIC, dead, 608 days
1471.1
TCGA-04-1514-01A
0 years, female, white, stage:Stage IIIA, dead, 1720 days
1466.8
TCGA-29-2428-01A
0 years, female, white, stage:Stage IIIC, alive, 1372 days
1464.6
TCGA-13-1506-01A
0 years, female, white, stage:Stage IIIC, dead, 1039 days
1464.0
TCGA-61-2098-01A
0 years, female, white, stage:Stage IIIC, alive, 1993 days
1463.3
TCGA-29-1695-01A
0 years, female, white, stage:Stage IIIC, dead, 1229 days
1461.2
TCGA-36-1580-01A
0 years, female, stage:Stage IIIC, dead, 737 days
1459.4
TCGA-61-1741-01A
0 years, female, white, stage:Stage IIIB, dead, 1024 days
1451.6
TCGA-24-1469-01A
0 years, female, white, stage:Stage IIIC, alive, 277 days
1446.4
TCGA-24-2020-01A
0 years, female, white, stage:Stage IIIC, dead, 4624 days
1434.6
TCGA-13-0714-01A
0 years, female, white, stage:Stage IV, dead, 189 days
1422.2
TCGA-10-0933-01A
0 years, female, white, stage:Stage IIIC, dead, 446 days
1413.6
TCGA-61-1724-01A
0 years, female, white, stage:Stage IIIC, dead, 637 days
1408.6
TCGA-31-1959-01A
0 years, female, white, stage:Stage IV, alive, 67 days
1382.0
TCGA-13-0720-01A
0 years, female, white, stage:Stage IIIC, dead, 1355 days
1373.0
TCGA-13-0768-01A
0 years, female, white, stage:Stage IIIC, dead, 1784 days
1369.4
TCGA-24-2026-01A
0 years, female, white, stage:Stage IIIC, dead, 1059 days
1367.2
TCGA-25-1319-01A
0 years, female, white, stage:Stage IIIC, dead, 1977 days
1364.3
TCGA-13-1407-01A
0 years, female, white, stage:Stage IIIC, alive, 2534 days
1352.7
TCGA-09-2045-01A
0 years, female, asian, stage:Stage IV, dead, 1069 days
1350.3
TCGA-29-1691-01A
0 years, female, white, stage:Stage IIIC, dead, 1470 days
1337.0
TCGA-61-2104-01A
0 years, female, white, stage:Stage IIC, alive, 2338 days
1332.0
TCGA-59-2354-01A
0 years, female, white, stage:Stage IIIC, dead, 1046 days
1309.1
TCGA-24-2027-01A
0 years, female, white, stage:Stage IV, dead, 3337 days
1282.2
TCGA-31-1951-01A
0 years, female, white, stage:Stage IIIC, alive, 684 days
1279.6
TCGA-5X-AA5U-01A
0 years, female, black or african american, stage:Stage IIC, alive, 361 days
1272.7
TCGA-24-2288-01A
0 years, female, white, stage:Stage IIIC, dead, 25 days
1260.7
TCGA-31-1950-01A
0 years, female, white, stage:Stage IIIC, alive, 571 days
1232.5
TCGA-04-1530-01A
0 years, female, white, stage:Stage IIIC, dead, 3622 days
1227.2
TCGA-29-1774-01A
0 years, female, white, stage:Stage IIIC, alive, 527 days
1225.7
TCGA-24-2036-01A
0 years, female, white, stage:Stage IIIA, dead, 1947 days
1223.7
TCGA-OY-A56Q-01A
0 years, female, black or african american, stage:Stage IIA, alive, 576 days
1219.7
TCGA-61-2012-01A
0 years, female, white, stage:Stage IIC, alive, 932 days
1219.6
TCGA-29-A5NZ-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1088 days
1198.8
TCGA-61-2003-01A
0 years, female, white, stage:Stage IIIC, alive, 122 days
1198.7
TCGA-29-1710-01A
0 years, female, white, stage:Stage IIIC, dead, 951 days
1198.3
TCGA-04-1648-01A
0 years, female, white, stage:Stage IIIC, dead, 871 days
1195.0
TCGA-24-2293-01A
0 years, female, white, stage:'--, dead, 506 days
1187.7
TCGA-23-1120-01A
0 years, female, white, stage:Stage IIIC, alive, 130 days
1175.8
TCGA-24-1928-01A
0 years, female, white, stage:Stage IIIC, dead, 336 days
1172.5
TCGA-57-1993-01A
0 years, female, white, stage:Stage IIIC, alive, 763 days
1170.3
TCGA-24-2289-01A
0 years, female, white, stage:Stage IV, dead, 2049 days
1153.5
TCGA-25-1628-01A
0 years, female, white, stage:Stage IIIC, dead, 627 days
1147.8
TCGA-04-1536-01A
0 years, female, black or african american, stage:Stage IV, dead, 885 days
1128.9
TCGA-25-1635-01A
0 years, female, white, stage:Stage IIIC, dead, 1583 days
1108.5
TCGA-29-1711-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 1053 days
1101.5
TCGA-29-2414-01A
0 years, female, white, stage:Stage IIIC, dead, 2621 days
1093.8
TCGA-36-1581-01A
0 years, female, white, stage:Stage IIC, alive, 751 days
1085.6
TCGA-24-2298-01A
0 years, female, white, stage:Stage IIIC, dead, 1620 days
1084.2
TCGA-61-2111-01A
0 years, female, white, stage:Stage IV, alive, 3825 days
1071.3
TCGA-61-2088-01A
0 years, female, white, stage:Stage IIIC, alive, 145 days
1065.3
TCGA-29-1781-01A
0 years, female, white, stage:Stage IIIC, alive, 255 days
1045.7
TCGA-24-2280-01A
0 years, female, white, stage:Stage IIIC, alive, 2143 days
1029.5
TCGA-61-2113-01A
0 years, female, white, stage:Stage IIC, dead, 676 days
1025.7
TCGA-24-1844-01A
0 years, female, white, stage:Stage IIIC, alive, 113 days
959.7
TCGA-13-1511-01A
0 years, female, asian, stage:Stage IV, dead, 1650 days
931.2
TCGA-24-1551-01A
0 years, female, white, stage:Stage IIIC, dead, 1579 days
917.7
TCGA-61-2102-01A
0 years, female, white, stage:Stage IIIC, dead, 197 days
856.7
TCGA-59-2348-01A
0 years, female, white, stage:Stage IIIC, alive, 5481 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RPS15 is not prognostic in Ovary Serous Cystadenocarcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
824.5
Number of samples
81
Samples
Sample
Description
TPM
DO46356
0 years, female, NA, stage:III, dead, 911 days
2765.6
DO46384
0 years, female, NA, stage:III, dead, 614 days
2430.0
DO46331
0 years, female, NA, stage:III, dead, 612 days
2100.5
DO46546
0 years, female, NA, stage:III, dead, 1889 days
2074.9
DO46390
0 years, female, NA, stage:III, dead, 374 days
2036.2
DO46333
0 years, female, NA, stage:III, dead, 359 days
1973.0
DO46366
0 years, female, NA, stage:III, dead, 2054 days
1708.8
DO46402
0 years, female, NA, stage:III, dead, 511 days
1668.2
DO46576
0 years, female, NA, stage:III, alive, 133 days
1607.3
DO46453
0 years, female, NA, stage:III, dead, 3294 days
1479.3
DO46342
0 years, female, NA, stage:III, dead, 1398 days
1432.3
DO46364
0 years, female, NA, stage:III, dead, 806 days
1273.9
DO46370
0 years, female, NA, stage:III, dead, 1727 days
1211.6
DO46591
0 years, female, NA, stage:III, dead, 195 days
1157.8
DO46404
0 years, female, NA, stage:III, dead, 690 days
1039.1
DO46352
0 years, female, NA, stage:III, dead, 677 days
1010.9
DO46611
0 years, female, NA, stage:III, dead, 734 days
1010.1
DO46380
0 years, female, NA, stage:III, dead, 1423 days
984.2
DO46602
0 years, female, NA, stage:III, dead, 205 days
953.4
DO46428
0 years, female, NA, stage:IV, alive, 2644 days
948.6
DO46412
0 years, female, NA, stage:III, dead, 597 days
913.2
DO46372
0 years, female, NA, stage:III, dead, 1326 days
893.7
DO46438
0 years, female, NA, stage:IV, alive, 2227 days
878.0
DO46513
0 years, female, NA, stage:IV, dead, 1883 days
850.5
DO46394
0 years, female, NA, stage:IV, dead, 1039 days
800.8
DO46378
0 years, female, NA, stage:III, alive, 843 days
755.6
DO46568
0 years, female, NA, stage:III, dead, 320 days
755.5
DO46376
0 years, female, NA, stage:III, dead, 1430 days
754.9
DO46326
0 years, female, NA, stage:III, dead, 701 days
752.7
DO46551
0 years, female, NA, stage:III, dead, 1055 days
745.0
DO46432
0 years, female, NA, stage:III, alive, 2218 days
743.6
DO46597
0 years, female, NA, stage:III, dead, 393 days
742.2
DO46468
0 years, female, NA, stage:III, alive, 2776 days
723.1
DO46392
0 years, female, NA, stage:III, dead, 628 days
710.9
DO46523
0 years, female, NA, stage:IV, alive, 1873 days
704.1
DO46463
0 years, female, NA, stage:III, dead, 2451 days
698.8
DO46368
0 years, female, NA, stage:III, dead, 2879 days
693.4
DO46443
0 years, female, NA, stage:III, dead, 2464 days
689.5
DO46538
0 years, female, NA, stage:III, dead, 1527 days
681.2
DO46350
0 years, female, NA, stage:III, dead, 886 days
670.3
DO46518
0 years, female, NA, stage:III, alive, 2960 days
669.7
DO46329
0 years, female, NA, stage:III, dead, 1699 days
663.4
DO46362
0 years, female, NA, stage:III, dead, 1639 days
652.0
DO46528
0 years, female, NA, stage:III, alive, 6139 days
646.1
DO46586
0 years, female, NA, stage:III, dead, 1019 days
640.3
DO46334
0 years, female, NA, stage:III, dead, 496 days
614.4
DO46448
0 years, female, NA, stage:III, dead, 654 days
610.5
DO46325
0 years, female, NA, stage:III, dead, 477 days
602.7
DO46560
0 years, female, NA, stage:IV, dead, 286 days
599.5
DO46561
0 years, female, NA, stage:III, dead, 195 days
598.2
DO46408
0 years, female, NA, stage:III, dead, 489 days
595.7
DO46338
0 years, female, NA, stage:III, dead, 596 days
589.6
DO46328
0 years, female, NA, stage:III, dead, 972 days
588.5
DO46581
0 years, female, NA, stage:III, dead, 408 days
582.1
DO46388
0 years, female, NA, stage:III, dead, 413 days
576.3
DO46436
0 years, female, NA, stage:III, alive, 3193 days
570.1
DO46398
0 years, female, NA, stage:III, alive, 437 days
566.7
DO46327
0 years, female, NA, stage:III, dead, 184 days
561.6
DO46358
0 years, female, NA, stage:III, dead, 423 days
557.3
DO46458
0 years, female, NA, stage:IV, alive, 3787 days
551.4
DO46571
0 years, female, NA, stage:III, dead, 243 days
534.8
DO46360
0 years, female, NA, stage:IV, dead, 1759 days
528.5
DO46400
0 years, female, NA, stage:III, dead, 719 days
514.1
DO46374
0 years, female, NA, stage:III, dead, 1409 days
506.2
DO46493
0 years, female, NA, stage:IV, alive, 839 days
504.6
DO46508
0 years, female, NA, stage:III, dead, 2101 days
499.0
DO46330
0 years, female, NA, stage:III, dead, 684 days
482.5
DO46386
0 years, female, NA, stage:III, dead, 1162 days
467.1
DO46533
0 years, female, NA, stage:III, alive, 3667 days
465.7
DO46344
0 years, female, NA, stage:III, dead, 642 days
434.0
DO46346
0 years, female, NA, stage:III, dead, 1187 days
411.6
DO46382
0 years, female, NA, stage:IV, dead, 311 days
409.7
DO46332
0 years, female, NA, stage:III, dead, 689 days
404.1
DO46336
0 years, female, NA, stage:IV, dead, 664 days
400.1
DO46588
0 years, female, NA, stage:III, dead, 438 days
380.7
DO46340
0 years, female, NA, stage:III, dead, 616 days
350.1
DO46396
0 years, female, NA, stage:III, dead, 583 days
342.0
DO46354
0 years, female, NA, stage:III, dead, 843 days
338.5
DO46606
0 years, female, NA, stage:III, alive, 804 days
296.8
DO46348
0 years, female, NA, stage:IV, dead, 287 days
238.2
DO46566
0 years, female, NA, stage:III, dead, 673 days
225.4
Show allShow less
OVARY SEROUS CYSTADENOCARCINOMA - Protein relative expression (CPTAC)
Number of samples
108
Samples
Sample ID
Sample type
nRPX
d38f40fb-dd78-43b2-8b7b-4b6977_D2
Tumor
1.4
3d3e1888-d67e-4c69-ba83-112d0f_D2
Tumor
1.4
41d0619e-b299-42e2-ac32-29e784_D2
Tumor
1.4
eb0a53df-7620-4024-8d2d-051142_D2
Tumor
1.4
a03d1103-b809-42c4-ad5c-5aff58_D2
Tumor
1.3
256ac9f5-1e19-44b4-92fb-fef3fc_D2
Tumor
1.3
a8853382-b726-4ce8-98d5-ca89df_D2
Tumor
1.1
627e6e36-3dca-4ee5-9755-6f3510_D2
Tumor
1.1
3a380577-c134-47ba-a1ce-988d7c_D2
Tumor
1.1
af95e2c6-25c4-4ab8-bf06-3e15ff_D2
Tumor
1.0
161317f3-1a39-438e-af45-cd2502_D2
Tumor
1.0
2563cb02-d58a-4286-8634-7502cd_D2
Tumor
1.0
1b2ab076-c72f-4bbe-b9f9-657d24_D2
Tumor
1.0
2dc28da8-7ff1-4b9b-b5bd-17cc25_D2
Tumor
1.0
558333b0-ea23-4303-9e3c-4932b1_D2
Tumor
0.9
79b60f32-6cca-4cb6-9a1e-22a3ac_D2
Tumor
0.9
51a4ce2f-4166-4c6b-a7e0-942d0a_D2
Tumor
0.9
27f3ca2d-a86f-479d-8e7e-5307c7_D2
Tumor
0.9
3dcf8b3c-c0c5-4dfa-9543-5d30fb_D2
Tumor
0.9
2224c03f-b7b1-4368-887e-2b4cdf_D2
Tumor
0.8
fe83e13f-9754-403b-8f74-d6caf8_D2
Tumor
0.8
91b287fd-eadb-442d-abcd-20b741_D2
Tumor
0.8
2115808b-6a0d-49bc-a8d7-b83bde_D2
Tumor
0.8
8d78194e-fbef-4819-a7b5-b73ae9_D2
Tumor
0.8
318d53c3-216b-4de1-a098-77d6dd_D2
Tumor
0.8
2b4ce90c-8036-4207-ac3e-54a76f_D2
Tumor
0.8
ce1e5dfc-2ef1-4633-af93-5ea4d9_D2
Tumor
0.8
6530147a-efe9-4df6-ac2f-03ece3_D2
Tumor
0.8
2433b136-fc7b-4cea-b958-bc6efb_D2
Tumor
0.8
1a10c200-3895-4648-b951-94f99f_D2
Tumor
0.8
347e379b-77c0-4dd3-aa25-18c9d1_D2
Tumor
0.8
c17b0ff9-9057-4848-a0cc-abb25f_D2
Tumor
0.7
f6c215ea-5381-4521-bb61-be8e97_D2
Tumor
0.7
62f5840e-6cd7-4200-b651-645e53_D2
Tumor
0.7
5c3971ee-87c7-4dff-b66e-f18892_D2
Tumor
0.7
46c73531-f531-4ec3-97fe-b39d9d_D2
Tumor
0.7
0cc794c3-5bf5-4621-b238-58a0f6_D2
Tumor
0.7
15524912-685a-47ce-a824-567848_D2
Tumor
0.7
e9d416e7-f661-400a-896e-388545_D2
Tumor
0.7
1de8d3d8-fc0e-4be0-8aa7-127c7b_D2
Tumor
0.7
d109a3c0-350e-47f5-bda0-61899c_D2
Tumor
0.7
28d0abdb-f682-4bd3-9425-a9c508_D2
Tumor
0.7
9a7a86d3-bbf2-4d36-941d-c75c03_D1_D2
Tumor
0.7
9b90eb78-2f50-4aeb-b010-d642f9_D2
Tumor
0.7
50997c44-1c8b-4d34-b535-4a6cc2_D2
Tumor
0.7
3946a96c-e0ae-442f-83b4-a9350e_D2
Tumor
0.6
7069e990-4a4e-4984-a66d-4d835a_D2
Tumor
0.6
a3a26070-fb84-406a-8280-d555e6_D2
Normal
0.6
285fed94-1495-448e-879b-b55de9_D2
Tumor
0.6
9c8e78bf-b03e-4ba0-9909-5ff070_D2
Tumor
0.6
e7b656bf-3c34-4ba1-bdf3-c7eefe_D2
Tumor
0.6
52c064a7-78d9-4a1a-85b4-27c6d1_D2
Tumor
0.6
5ea22f5e-307b-491d-801f-8b7fa6_D2
Tumor
0.6
d4791079-c826-4fc7-9d9b-ee20ba_D2
Tumor
0.5
3490835c-c004-45ed-91f3-7c206f_D2
Tumor
0.5
76e77c6b-c80e-4391-bdbb-e1dcea_D2
Tumor
0.5
8234f8ea-bdbd-45b0-bd0b-16f1e7_D2
Tumor
0.5
80873a0c-1f40-4d51-bab1-3f2071_D2
Tumor
0.5
2f901c90-617e-46da-9fac-d68369_D2
Tumor
0.5
4ccb249a-6722-491e-97e9-e3b4e7_D2
Tumor
0.5
340a3769-3031-41ae-bb08-a2f696_D2
Normal
0.4
42d860a3-8a0c-4c44-a09a-9ad8cf_D2
Tumor
0.4
69d552be-7cb2-4bb4-b602-a27b3e_D2
Tumor
0.4
1c9145ad-1981-4871-aa7e-8b11de_D2
Tumor
0.4
61f76fe6-a1c6-41b8-bdc2-2f9209_D2
Normal
0.4
1772e913-f62e-446a-8cf3-720348_D2
Tumor
0.4
fbb41c94-aabd-49cc-90b2-882c3e_D2
Tumor
0.4
1556af7e-c2ae-4fce-9aae-87c459_D1_D2
Normal
0.4
49bd51fe-48a1-4828-b66e-b30c38_D2
Tumor
0.4
08296da7-70ea-44df-8646-09f2cc_D2
Tumor
0.4
10c2d629-0287-4511-ac25-f29031_D2
Tumor
0.3
51c1c79e-5a8e-4b0a-bf92-1c0cab_D2
Tumor
0.3
9e0d47e0-f633-468b-b82b-4d752d_D2
Tumor
0.3
927f0958-db5a-4bc5-92b7-2a3695_D2
Tumor
0.3
092af714-b97a-457c-b0e9-8c20e8_D2
Normal
0.3
31c15e30-21d4-4843-bd4a-9cd0d8_D2
Normal
0.2
05387aad-2a1f-42c2-8d6f-950598_D3
Tumor
0.2
7d953d1d-84b6-4ecd-b1d7-1ed865_D2
Tumor
0.2
3e746bea-ed68-40e6-b348-6ddf08_D2
Normal
0.2
cfd76f9a-ce60-4ec7-8e6b-a8fc31_D3
Tumor
0.2
bd266bdd-12e4-42cb-9c49-911bfc_D2
Tumor
0.2
3fbf076a-824b-4eac-b6dc-bf5e59_D2
Normal
0.2
efc971f8-54c5-4531-a792-705ecf_D2
Tumor
0.1
74a45e5a-a35a-4c60-a4b4-f3f5ea_D2
Tumor
0.1
e3ebe010-cd31-4b5d-8fcb-b7103b_D2
Tumor
0.1
8e17b45e-6a06-4e4e-913d-7b1edb_D2
Tumor
0.0
35a345a4-e954-4c81-ae3f-7797cd_D2
Tumor
0.0
a65d8e76-640f-4341-a561-afbb57_D2
Normal
0.0
eb3f3494-7057-4afe-b212-e6e9a3_D2
Tumor
0.0
b9c1f22e-61f7-45ed-b3b4-5094c7_D2
Normal
-0.1
2b73e01c-347a-4dae-a71d-752aeb_D2
Normal
-0.2
7c7ce2d7-6c8a-424e-8e6c-d14ad1_D2
Tumor
-0.2
a583d3ff-8165-43e9-b764-23b7ef_D1_D2
Normal
-0.2
7edfd606-4bee-4529-9fec-1ca7f0_D2
Normal
-0.2
1abbcb28-f221-4cd4-8c01-37b9bb_D1_D2
Normal
-0.3
685ec3c2-e67a-40d3-9eb3-aa01c9_D1_D2
Normal
-0.3
6319b36b-533c-4e86-8e12-80552e_D3
Tumor
-0.3
b22659b9-e12c-4725-a7db-a833de_D1_D2
Normal
-0.3
994f9b8e-46cb-413f-8ec8-2c2fed_D2
Normal
-0.4
e6850782-fd2a-4c53-b682-1852fe_D2
Tumor
-0.5
0745488e-0bfb-4d1f-8228-dedf76_D1_D2
Normal
-0.5
e23eb014-69c1-460a-b9d4-9786c8_D2
Normal
-0.6
21efd60f-6a31-4b98-9477-16a905_D2
Normal
-0.7
1db5574d-aca7-403c-8100-6e705f_D2
Normal
-0.8
8ed739dd-ae0f-4881-971a-db3cf4_D1_D2
Normal
-0.9
6e209757-a7f4-45af-b5f3-2ebc02_D2
Normal
-0.9
2ed8beb2-bc63-4bad-b5fe-1916a0_D2
Tumor
-1.1
0c87932d-b6fd-4eb5-b86a-a34d07_D2
Tumor
-1.1
Show allShow less
OVARIAN CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.