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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GTF3C2 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
20.2
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
49.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
48.9
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
45.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
44.6
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
42.2
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
39.1
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
39.0
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
33.8
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
33.7
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
32.4
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
32.3
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
31.2
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
31.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
26.5
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
25.9
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
23.9
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
23.3
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
22.2
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
22.1
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
21.9
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
21.2
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
20.8
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
20.6
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
19.9
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
19.6
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
18.3
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
18.1
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
17.9
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
17.2
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
17.0
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
16.6
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
16.5
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
16.5
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
16.4
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
16.3
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
16.3
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
16.1
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
16.0
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
15.2
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
15.0
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
14.6
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
14.3
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
14.0
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
14.0
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
13.5
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
13.5
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
13.2
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
12.9
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
12.7
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
12.6
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
12.6
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
12.3
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
12.1
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
11.9
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
11.5
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
11.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
10.9
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
10.9
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
9.1
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
8.8
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
8.6
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
8.5
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
8.4
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GTF3C2 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
23.2
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
46.5
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
43.7
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
43.4
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
42.0
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
39.3
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
39.1
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
38.9
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
38.2
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
37.6
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
36.9
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
36.5
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
36.5
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
35.7
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
35.7
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
35.5
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
35.1
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
35.0
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
34.7
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
34.7
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
34.4
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
34.3
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
34.3
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
33.9
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
33.6
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
33.6
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
33.5
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
33.5
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
33.4
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
33.2
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
32.9
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
32.9
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
32.8
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
32.6
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
32.4
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
32.4
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
32.3
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
32.2
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
32.1
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
31.9
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
31.8
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
31.8
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
31.5
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
31.5
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
31.4
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
31.4
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
31.2
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
31.2
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
31.1
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
31.0
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
30.9
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
30.8
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
30.6
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
30.5
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
30.3
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
30.3
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
30.3
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
30.2
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
30.2
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
30.2
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
30.1
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
30.1
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
30.1
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
30.0
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
30.0
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
30.0
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
29.8
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
29.8
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
29.8
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
29.6
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
29.5
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
29.5
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
29.4
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
29.4
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
29.3
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
29.3
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
29.2
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
29.2
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
29.2
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
29.1
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
29.0
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
29.0
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
28.9
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
28.9
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
28.9
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
28.8
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
28.7
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
28.7
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
28.6
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
28.5
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
28.5
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
28.4
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
28.3
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
28.2
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
28.1
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
28.1
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
28.0
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
28.0
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
28.0
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
27.9
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
27.9
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
27.9
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
27.9
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
27.8
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
27.7
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
27.6
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
27.6
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
27.6
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
27.6
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
27.5
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
27.5
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
27.5
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
27.4
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
27.4
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
27.4
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
27.3
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
27.3
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
27.3
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
27.2
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
27.2
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
27.1
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
27.1
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
27.1
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
27.1
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
27.0
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
27.0
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
26.9
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
26.9
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
26.9
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
26.8
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
26.8
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
26.7
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
26.7
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
26.7
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
26.6
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
26.6
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
26.6
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
26.6
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
26.5
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
26.5
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
26.5
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
26.5
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
26.5
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
26.4
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
26.4
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
26.4
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
26.4
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
26.4
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
26.3
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
26.2
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
26.2
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
26.2
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
26.2
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
26.1
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
26.1
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
26.0
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
26.0
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
26.0
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
26.0
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
26.0
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
26.0
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
25.9
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
25.8
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
25.8
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
25.7
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
25.7
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
25.7
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
25.6
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
25.5
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
25.5
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
25.5
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
25.5
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
25.5
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
25.5
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
25.4
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
25.4
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
25.3
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
25.3
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
25.3
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
25.3
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
25.3
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
25.3
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
25.3
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
25.2
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
25.1
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
25.1
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
25.1
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
25.1
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
25.1
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
25.0
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
25.0
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
25.0
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
25.0
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
25.0
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
24.9
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
24.9
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
24.9
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
24.9
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
24.8
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
24.8
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
24.8
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
24.8
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
24.8
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
24.8
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
24.8
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
24.8
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
24.7
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
24.7
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
24.7
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
24.7
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
24.6
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
24.6
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
24.6
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
24.6
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
24.6
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
24.5
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
24.5
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
24.5
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
24.4
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
24.4
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
24.4
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
24.4
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
24.4
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
24.3
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
24.3
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
24.2
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
24.1
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
24.1
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
24.1
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
24.1
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
24.1
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
24.0
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
24.0
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
23.9
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
23.9
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
23.9
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
23.9
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
23.9
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
23.9
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
23.9
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
23.8
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
23.8
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
23.8
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
23.8
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
23.7
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
23.7
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
23.6
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
23.6
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
23.5
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
23.5
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
23.5
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
23.4
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
23.4
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
23.4
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
23.4
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
23.4
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
23.3
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
23.3
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
23.3
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
23.3
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
23.3
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
23.2
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
23.2
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
23.2
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
23.2
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
23.2
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
23.1
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
23.1
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
23.0
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
23.0
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
23.0
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
23.0
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
23.0
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
23.0
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
23.0
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
22.9
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
22.9
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
22.9
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
22.8
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
22.8
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
22.8
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
22.7
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
22.7
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
22.6
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
22.5
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
22.5
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
22.5
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
22.4
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
22.4
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
22.4
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
22.3
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
22.3
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
22.3
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
22.3
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
22.3
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
22.2
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
22.2
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
22.2
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
22.2
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
22.1
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
22.1
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
22.1
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
22.0
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
22.0
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
22.0
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
22.0
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
22.0
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
22.0
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
22.0
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
21.9
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
21.9
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
21.8
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
21.8
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
21.8
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
21.7
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
21.7
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
21.7
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
21.7
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
21.7
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
21.7
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
21.7
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
21.6
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
21.6
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
21.6
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
21.6
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
21.6
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
21.6
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
21.6
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
21.5
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
21.5
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
21.5
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
21.4
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
21.3
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
21.3
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
21.3
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
21.3
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
21.2
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
21.2
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
21.2
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
21.1
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
21.1
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
21.1
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
21.1
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
21.1
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
21.0
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
21.0
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
21.0
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
21.0
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
21.0
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
20.9
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
20.9
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
20.9
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
20.7
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
20.7
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
20.6
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
20.6
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
20.5
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
20.3
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
20.3
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
20.2
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
20.2
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
20.2
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
20.1
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
20.1
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
20.1
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
20.1
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
20.1
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
20.0
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
20.0
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
19.9
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
19.9
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
19.8
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
19.8
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
19.7
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
19.7
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
19.7
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
19.6
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
19.6
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
19.5
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
19.4
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
19.4
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
19.4
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
19.4
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
19.3
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
19.3
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
19.2
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
19.2
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
19.2
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
19.1
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
19.1
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
19.1
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
19.0
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
18.9
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
18.9
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
18.9
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
18.8
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
18.8
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
18.8
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
18.7
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
18.7
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
18.7
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
18.7
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
18.7
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
18.7
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
18.7
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
18.6
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
18.6
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
18.5
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
18.5
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
18.5
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
18.4
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
18.4
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
18.4
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
18.4
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
18.4
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
18.4
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
18.3
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
18.3
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
18.3
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
18.3
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
18.3
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
18.3
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
18.2
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
18.2
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
18.1
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
18.1
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
18.0
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
18.0
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
18.0
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
18.0
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
17.8
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
17.8
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
17.8
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
17.8
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
17.6
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
17.6
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
17.6
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
17.5
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
17.5
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
17.3
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
17.3
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
17.3
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
17.2
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
17.2
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
17.1
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
17.0
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
17.0
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
16.9
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
16.9
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
16.8
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
16.8
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
16.8
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
16.7
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
16.7
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
16.7
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
16.6
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
16.6
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
16.6
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
16.6
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
16.5
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
16.4
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
16.4
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
16.3
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
16.3
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
16.0
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
16.0
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
15.8
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
15.8
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
15.7
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
15.6
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
15.6
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
15.6
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
15.5
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
15.5
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
15.4
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
15.3
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
15.2
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
15.2
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
15.2
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
15.2
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
15.1
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
15.0
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
15.0
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
14.9
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
14.8
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
14.8
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
14.7
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
14.6
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
14.4
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
14.4
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
14.3
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
14.3
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
14.0
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
13.9
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
13.8
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
13.5
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
13.1
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
13.1
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
13.0
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
12.8
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
12.6
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
12.5
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
12.5
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
12.4
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
12.0
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
11.8
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
11.7
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
11.4
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
11.4
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
11.4
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
11.1
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
11.0
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
11.0
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
10.7
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
10.5
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
10.3
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
9.6
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
9.0
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
6.8
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
6.7
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
6.1
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GTF3C2 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
27.0
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
66.1
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
45.5
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
44.2
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
42.9
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
41.5
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
40.9
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
38.9
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
38.4
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
36.3
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
35.6
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
35.3
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
35.1
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
34.1
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
33.2
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
32.8
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
32.6
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
31.7
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
31.7
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
31.0
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
30.9
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
30.4
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
30.4
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
30.1
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
30.1
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
29.4
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
29.3
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
29.2
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
29.0
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
29.0
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
28.8
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
28.5
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
28.5
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
28.4
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
28.4
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
28.3
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
28.1
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
28.1
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
28.1
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
28.0
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
28.0
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
27.8
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
27.8
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
27.6
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
27.4
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
27.4
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
27.3
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
27.3
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
27.3
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
27.2
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
26.9
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
26.8
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
26.7
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
26.7
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
26.5
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
26.3
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
26.2
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
26.0
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
25.8
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
25.7
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
25.4
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
25.3
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
25.2
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
25.0
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
24.7
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
24.5
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
24.0
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
23.6
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
23.6
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
23.3
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
23.2
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
23.0
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
22.6
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
22.6
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
22.5
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
22.4
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
22.3
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
22.0
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
22.0
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
21.2
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
21.1
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
20.9
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
20.7
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
20.5
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
20.4
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
20.3
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
19.8
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
19.6
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
19.6
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
19.6
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
19.1
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
19.0
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
18.8
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
17.8
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
17.8
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
17.7
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
17.0
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
16.7
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
16.6
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
16.1
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GTF3C2 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
34.3
Number of samples
282
Samples
Sample
Description
TPM
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
135.9
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
104.8
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
102.6
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
94.8
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
85.6
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
85.4
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
84.4
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
84.1
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
82.5
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
78.7
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
76.9
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
74.9
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
72.7
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
71.3
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
69.1
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
68.6
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
68.4
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
66.8
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
66.3
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
63.8
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
62.3
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
57.8
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
57.2
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
57.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
56.1
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
54.1
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
51.1
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
50.1
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
49.5
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
49.5
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
49.3
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
49.2
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
48.9
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
48.9
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
48.8
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
47.8
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
47.7
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
47.5
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
47.3
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
46.9
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
46.8
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
46.5
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
45.9
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
45.8
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
45.7
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
45.6
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
44.9
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
44.6
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
44.3
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
44.2
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
44.1
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
43.7
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
43.6
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
43.4
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
43.4
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
42.9
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
42.8
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
42.1
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
41.8
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
41.6
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
41.4
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
40.7
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
40.7
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
40.5
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
40.3
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
40.0
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
39.7
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
39.5
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
39.4
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
39.3
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
39.1
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
39.0
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
38.3
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
38.1
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
37.9
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
37.6
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
37.5
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
37.3
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
37.1
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
36.7
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
36.6
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
36.6
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
36.6
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
36.5
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
36.5
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
36.3
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
36.2
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
36.2
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
36.1
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
36.1
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
36.0
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
35.9
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
35.7
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
35.5
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
35.5
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
35.3
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
35.2
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
35.2
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
35.0
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
34.9
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
34.8
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
34.7
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
34.5
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
34.4
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
34.4
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
34.2
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
34.2
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
34.1
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
33.9
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
33.8
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
33.7
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
33.5
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
33.4
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
33.3
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
33.3
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
33.2
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
33.0
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
32.9
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
32.9
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
32.9
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
32.9
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
32.8
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
32.6
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
32.6
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
32.6
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
32.4
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
32.3
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
32.2
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
32.1
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
32.1
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
32.1
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
31.8
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
31.8
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
31.7
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
31.6
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
31.5
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
31.2
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
31.2
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
30.8
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
30.7
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
30.6
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
30.6
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
30.5
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
30.4
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
30.3
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
30.2
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
30.1
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
30.1
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
30.1
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
30.0
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
30.0
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
29.9
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
29.9
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
29.8
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
29.8
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
29.8
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
29.7
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
29.4
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
29.4
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
29.4
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
29.2
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
29.2
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
29.1
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
29.0
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
28.8
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
28.8
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
28.7
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
28.6
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
28.4
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
28.4
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
28.3
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
28.3
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
28.2
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
28.2
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
28.1
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
28.0
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
27.9
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
27.7
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
27.7
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
27.5
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
27.1
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
27.0
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
26.7
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
26.6
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
26.6
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
26.4
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
26.3
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
26.3
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
26.3
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
26.1
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
26.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
26.0
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
25.9
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
25.8
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
25.7
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
25.6
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
25.5
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
25.5
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
25.3
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
25.1
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
25.1
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
25.1
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
25.1
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
25.0
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
24.6
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
24.5
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
24.2
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
24.1
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
24.1
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
23.9
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
23.9
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
23.8
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
23.8
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
23.7
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
23.5
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
23.5
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
23.5
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
23.5
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
23.4
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
23.4
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
23.4
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
23.1
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
22.5
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
22.5
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
22.5
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
22.3
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
22.3
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
22.2
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
22.2
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
22.1
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
22.1
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
22.0
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
21.9
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
21.7
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
21.6
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
21.6
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
21.5
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
21.4
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
21.4
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
21.2
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
20.9
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
20.6
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
20.5
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
20.4
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
20.1
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
19.9
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
19.8
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
19.7
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
19.5
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
19.3
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
19.0
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
18.6
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
18.5
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
18.5
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
18.4
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
18.4
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
18.1
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
18.1
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
18.1
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
18.0
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
17.9
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
17.8
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
17.8
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
17.5
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
17.2
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
17.1
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
17.0
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
16.9
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
16.9
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
16.7
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
16.2
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
15.9
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
15.8
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
15.0
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
15.0
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
14.6
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
14.1
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
13.1
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
12.8
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
12.2
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
11.9
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
10.7
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0017850003
Tumor
0.5
CPT0077110003
Tumor
0.5
CPT0011410003
Tumor
0.4
CPT0079230003
Tumor
0.3
CPT0012180003
Tumor
0.3
CPT0081990003
Tumor
0.3
CPT0075170001
Normal
0.3
CPT0001230001
Normal
0.3
CPT0077320001
Normal
0.3
CPT0079300001
Normal
0.3
CPT0024680001
Normal
0.3
CPT0012640003
Normal
0.3
CPT0023690003
Tumor
0.3
CPT0009060003
Tumor
0.2
CPT0075720003
Tumor
0.2
CPT0086820003
Tumor
0.2
CPT0086870003
Tumor
0.2
CPT0012670003
Tumor
0.2
CPT0075560003
Tumor
0.2
CPT0001510001
Normal
0.2
CPT0092310003
Normal
0.2
CPT0088630003
Tumor
0.2
CPT0079000001
Normal
0.2
CPT0006440003
Tumor
0.2
CPT0078800003
Tumor
0.2
CPT0078990003
Tumor
0.2
CPT0092190003
Normal
0.2
CPT0014450004
Tumor
0.2
CPT0001340003
Tumor
0.2
CPT0082010001
Normal
0.2
CPT0065820001
Normal
0.2
CPT0087050003
Normal
0.2
CPT0065810003
Tumor
0.2
CPT0075130003
Tumor
0.2
CPT0069190001
Normal
0.2
CPT0085670003
Tumor
0.2
CPT0025580004
Tumor
0.2
CPT0084590001
Normal
0.2
CPT0066430001
Normal
0.2
CPT0088570001
Normal
0.2
CPT0017450001
Normal
0.2
CPT0025920001
Normal
0.2
CPT0026410003
Tumor
0.2
CPT0064400001
Normal
0.2
CPT0089460004
Tumor
0.2
CPT0023710001
Normal
0.2
CPT0026420001
Normal
0.2
CPT0078670001
Normal
0.2
CPT0079180003
Tumor
0.1
CPT0079410003
Tumor
0.1
CPT0078510003
Tumor
0.1
CPT0086970003
Normal
0.1
CPT0024670003
Tumor
0.1
CPT0014130001
Normal
0.1
CPT0086370003
Normal
0.1
CPT0001350001
Normal
0.1
CPT0086030003
Tumor
0.1
CPT0077500001
Normal
0.1
CPT0088500001
Normal
0.1
CPT0089040001
Normal
0.1
CPT0020020001
Normal
0.1
CPT0088480003
Tumor
0.1
CPT0007870001
Normal
0.1
CPT0010160003
Tumor
0.1
CPT0001190001
Normal
0.1
CPT0066520001
Normal
0.1
CPT0025610001
Normal
0.1
CPT0069010001
Normal
0.1
CPT0025170003
Tumor
0.1
CPT0078930003
Tumor
0.1
CPT0065750003
Tumor
0.1
CPT0081600003
Tumor
0.1
CPT0092740003
Normal
0.1
CPT0010170001
Normal
0.1
CPT0089480003
Normal
0.1
CPT0081620001
Normal
0.1
CPT0012080003
Tumor
0.1
CPT0078840001
Normal
0.1
CPT0014470001
Normal
0.1
CPT0007860003
Tumor
0.1
CPT0012290003
Normal
0.1
CPT0009080003
Normal
0.1
CPT0088970003
Tumor
0.1
CPT0000660001
Normal
0.1
CPT0078830003
Tumor
0.1
CPT0012090003
Normal
0.1
CPT0025350003
Tumor
0.1
CPT0014370004
Tumor
0.1
CPT0000890001
Normal
0.1
CPT0086830003
Normal
0.1
CPT0012370003
Tumor
0.1
CPT0023360001
Normal
0.1
CPT0001260009
Tumor
0.1
CPT0018250001
Normal
0.1
CPT0001550001
Normal
0.1
CPT0079430001
Normal
0.1
CPT0025060001
Normal
0.1
CPT0015910003
Tumor
0.0
CPT0020130001
Normal
0.0
CPT0006730001
Normal
0.0
CPT0063640001
Normal
0.0
CPT0066470004
Tumor
0.0
CPT0078940001
Normal
0.0
CPT0084560003
Tumor
0.0
CPT0000870016
Tumor
0.0
CPT0000790001
Normal
0.0
CPT0009020003
Normal
0.0
CPT0000640003
Tumor
0.0
CPT0075570001
Normal
0.0
CPT0014350001
Normal
0.0
CPT0065450001
Normal
0.0
CPT0077140001
Normal
0.0
CPT0012280003
Tumor
0.0
CPT0001180009
Tumor
0.0
CPT0012570003
Normal
0.0
CPT0002370001
Normal
0.0
CPT0001270001
Normal
0.0
CPT0025290003
Tumor
0.0
CPT0015730003
Tumor
0.0
CPT0063330001
Normal
0.0
CPT0001500009
Tumor
0.0
CPT0019160001
Normal
0.0
CPT0077490003
Tumor
0.0
CPT0088710001
Normal
0.0
CPT0092800003
Normal
0.0
CPT0012770003
Normal
0.0
CPT0086360003
Tumor
0.0
CPT0010110003
Tumor
0.0
CPT0006950001
Normal
0.0
CPT0012920003
Normal
0.0
CPT0006530001
Normal
0.0
CPT0006630003
Tumor
0.0
CPT0088780001
Normal
0.0
CPT0020120003
Tumor
0.0
CPT0069160003
Tumor
0.0
CPT0089020003
Tumor
0.0
CPT0025110003
Tumor
0.0
CPT0088760003
Tumor
0.0
CPT0076350001
Normal
0.0
CPT0088640003
Normal
0.0
CPT0001540009
Tumor
0.0
CPT0071150004
Tumor
0.0
CPT0079480003
Tumor
0.0
CPT0086890003
Normal
0.0
CPT0069000003
Tumor
0.0
CPT0012900004
Tumor
-0.1
CPT0088920001
Normal
-0.1
CPT0010120001
Normal
-0.1
CPT0081880003
Tumor
-0.1
CPT0002350011
Tumor
-0.1
CPT0007470001
Normal
-0.1
CPT0079270003
Tumor
-0.1
CPT0009000003
Tumor
-0.1
CPT0063630003
Tumor
-0.1
CPT0065930003
Tumor
-0.1
CPT0086950003
Tumor
-0.1
CPT0006900003
Tumor
-0.1
CPT0078530001
Normal
-0.1
CPT0092160003
Tumor
-0.1
CPT0066480003
Tumor
-0.1
CPT0013790003
Normal
-0.1
CPT0025880003
Tumor
-0.1
CPT0019130003
Tumor
-0.1
CPT0065690003
Tumor
-0.1
CPT0007320003
Tumor
-0.1
CPT0079510001
Normal
-0.1
CPT0065870003
Tumor
-0.1
CPT0065430003
Tumor
-0.1
CPT0092790003
Tumor
-0.1
CPT0092730003
Tumor
-0.2
CPT0000780007
Tumor
-0.2
CPT0021240003
Tumor
-0.2
CPT0077310003
Tumor
-0.2
CPT0001220008
Tumor
-0.2
CPT0017410003
Tumor
-0.2
CPT0079380003
Tumor
-0.2
CPT0063320003
Tumor
-0.2
CPT0088550004
Tumor
-0.2
CPT0078660003
Tumor
-0.2
CPT0088690003
Tumor
-0.2
CPT0011240003
Tumor
-0.2
CPT0023350003
Tumor
-0.2
CPT0025230003
Tumor
-0.2
CPT0019990003
Tumor
-0.2
CPT0087040003
Tumor
-0.2
CPT0012550003
Tumor
-0.3
CPT0015810003
Tumor
-0.3
CPT0014160003
Tumor
-0.3
CPT0002270011
Tumor
-0.3
CPT0088900003
Tumor
-0.3
CPT0076330003
Tumor
-0.3
CPT0092290003
Tumor
-0.4
CPT0064370003
Tumor
-0.4
CPT0025050003
Tumor
-0.4
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
