HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:14.6 nTPM
HPA Brain:41.2 nTPM
GTEx:14.6 nTPM
FANTOM5:36.1 Scaled Tags Per Million
Pig:93.2 nTPM
Mouse:62.5 nTPM
Allen mouse:8.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA008012Antibody HPA045506
Glial cells Not detectedLow
Neuronal cells HighHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 41.2
Sample id Sample description nTPM
Hippocampus
nTPM: 32.5
1898 Male, age 80, left hemisphere 40.0
1911 Female, age 85, right hemisphere 33.8
1855 Male, age 76, left hemisphere 33.2
2148 Female, age 91, left hemisphere 29.7
2529 Female, age 94, left hemisphere 29.1
2621 Female, age 67, right hemisphere 28.9
Dentate gyrus
nTPM: 29.3
1927 Female, age 91, both hemispheres 39.4
2010 Male, age 76, both hemispheres 36.3
2246 Female, age 85, both hemispheres 33.7
2528 Male, age 74, both hemispheres 23.8
2530 Female, age 94, left hemisphere 22.3
2531 Female, age 67, both hemispheres 20.4
Entorhinal gyrus
nTPM: 29.4
1938 Female, age 85, left hemisphere 41.2
2764 Male, age 80, right hemisphere 29.8
1787 Male, age 76, left hemisphere 28.9
2117 Female, age 91, right hemisphere 27.9
2613 Female, age 94, left hemisphere 27.2
2686 Male, age 75, right hemisphere 21.4
Hippocampus, CA1
nTPM: 41.2
2749 Male, age 80, left hemisphere 71.3
1873 Female, age 85, both hemispheres 40.7
2527 Male, age 74, both hemispheres 34.2
2045 Male, age 76, both hemispheres 32.5
2082 Female, age 91, right hemisphere 27.3
Hippocampus, CA2
nTPM: 31.9
1963 Male, age 80, left hemisphere 39.4
1892 Male, age 76, both hemispheres 39.2
2249 Male, age 74, both hemispheres 33.8
2113 Female, age 91, right hemisphere 28.7
1940 Female, age 85, left hemisphere 27.4
2437 Female, age 94, left hemisphere 22.7
Hippocampus, CA3
nTPM: 34.2
2137 Male, age 80, left hemisphere 64.0
1867 Male, age 76, both hemispheres 38.2
1891 Female, age 85, both hemispheres 30.8
2436 Male, age 74, both hemispheres 29.0
2861 Female, age 67, both hemispheres 22.2
2620 Female, age 94, left hemisphere 20.7
Parahippocampal cortex
nTPM: 29.7
1850 Male, age 80, both hemispheres 38.2
1933 Female, age 85, both hemispheres 34.2
1990 Female, age 91, right hemisphere 33.5
2245 Female, age 91, both hemispheres 31.2
2250 Female, age 67, right hemisphere 30.9
2018 Male, age 76, both hemispheres 28.7
2693 Female, age 94, both hemispheres 27.5
2692 Male, age 74, both hemispheres 26.2
2622 Female, age 67, right hemisphere 24.7
2532 Female, age 72, left hemisphere 21.8
Perirhinal gyrus
nTPM: 32.1
1847 Female, age 91, left hemisphere 42.2
1841 Female, age 85, right hemisphere 33.3
1794 Male, age 80, right hemisphere 32.4
2521 Female, age 94, right hemisphere 27.8
2848 Male, age 76, right hemisphere 24.8
Subiculum
nTPM: 29.8
1901 Male, age 80, both hemispheres 39.8
1977 Female, age 85, both hemispheres 33.5
2042 Male, age 76, both hemispheres 31.6
2729 Female, age 91, right hemisphere 27.4
2619 Male, age 74, both hemispheres 25.4
2438 Female, age 94, left hemisphere 21.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 14.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 14.6
Samples: 197

Max nTPM: 35.6
Min nTPM: 5.1
Std nTPM: 4.6
Median nTPM: 14.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 35.6
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 25.0
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 24.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 24.3
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 23.5
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 23.3
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 23.2
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 22.7
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 22.6
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 22.5
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 22.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 36.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 36.1
FF:10169-103B7 60 years, female 40.5
FF:10153-102I9 76 years, female 31.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 93.2
Pig sample Sample description nTPM
Subiculum
nTPM: 80.2
Samples: 4

Max nTPM: 98.7
Min nTPM: 64.5
Sample A Female 98.7
Sample B Female 81.0
Sample C Male 76.7
Sample D Male 64.5
Dorsal hippocampus
nTPM: 93.2
Samples: 4

Max nTPM: 104.7
Min nTPM: 85.6
Sample A Female 104.7
Sample B Female 89.2
Sample C Male 93.4
Sample D Male 85.6
Entorhinal cortex
nTPM: 74.9
Samples: 4

Max nTPM: 82.1
Min nTPM: 69.2
Sample A Female 71.2
Sample B Female 82.1
Sample C Male 76.9
Sample D Male 69.2
Ventral hippocampus
nTPM: 79.7
Samples: 4

Max nTPM: 94.8
Min nTPM: 72.8
Sample A Female 72.8
Sample B Female 75.1
Sample C Male 75.9
Sample D Male 94.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 62.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 62.2
Samples: 4

Max nTPM: 70.0
Min nTPM: 55.2
Sample A Male 59.5
Sample B Male 55.2
Sample C Female 64.2
Sample D Female 70.0
Hippocampal formation
nTPM: 62.5
Samples: 4

Max nTPM: 67.4
Min nTPM: 57.0
Sample A Male 62.7
Sample B Male 67.4
Sample C Female 62.9
Sample D Female 57.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 8.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.0
70615598 Antisense, RP_050725_01_D06, Mouse strain C57BL/6J (56 days, male) 9.3
75749419 Antisense, RP_060518_04_E03, Mouse strain C57BL/6J (56 days, male) 6.7

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