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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SSR3 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
42.0
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
406.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
101.0
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
93.6
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
75.5
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
70.9
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
67.8
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
62.3
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
60.8
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
57.7
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
57.6
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
56.7
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
54.9
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
54.4
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
53.2
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
48.8
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
48.5
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
48.4
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
48.2
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
47.2
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
45.4
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
45.2
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
43.8
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
43.1
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
42.9
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
37.4
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
37.3
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
36.2
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
35.2
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
35.0
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
34.5
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
34.2
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
31.9
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
31.4
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
31.3
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
29.3
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
28.9
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
28.6
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
27.7
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
27.6
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
26.9
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
26.8
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
26.5
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
25.5
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
23.4
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
22.8
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
22.7
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
21.7
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
21.6
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
21.5
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
20.8
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
18.4
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
17.4
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
16.5
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
16.3
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
15.7
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
15.7
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
15.6
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
15.5
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
14.7
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
13.9
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
13.9
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
13.7
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
10.9
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SSR3 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
90.5
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
317.3
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
284.0
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
281.5
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
270.8
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
260.3
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
249.3
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
245.0
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
233.9
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
232.9
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
229.5
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
227.9
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
226.8
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
219.7
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
210.1
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
209.0
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
206.9
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
206.6
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
201.2
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
201.1
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
199.5
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
195.8
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
194.7
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
192.4
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
184.8
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
183.7
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
182.4
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
182.3
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
176.8
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
175.6
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
173.2
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
172.2
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
169.9
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
169.0
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
169.0
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
167.5
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
167.2
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
166.7
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
165.7
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
165.6
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
165.1
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
163.7
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
161.2
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
159.7
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
158.8
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
157.0
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
154.2
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
154.0
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
153.5
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
151.7
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
151.5
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
151.3
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
150.0
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
149.1
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
146.1
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
146.1
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
146.0
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
144.3
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
143.8
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
143.1
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
142.8
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
142.6
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
141.5
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
141.4
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
141.1
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
137.5
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
136.3
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
135.9
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
135.4
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
134.8
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
134.5
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
133.0
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
132.6
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
131.1
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
130.6
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
130.3
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
129.8
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
129.6
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
126.5
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
125.3
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
125.2
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
125.1
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
124.5
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
124.1
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
124.1
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
123.7
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
123.1
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
122.9
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
122.7
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
122.2
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
122.0
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
120.1
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
118.9
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
118.7
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
118.0
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
118.0
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
117.6
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
117.6
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
117.1
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
116.9
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
116.7
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
116.3
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
115.8
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
115.4
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
114.1
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
114.0
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
113.9
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
113.7
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
113.3
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
113.3
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
112.9
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
112.1
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
112.1
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
112.0
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
111.7
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
111.5
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
111.3
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
110.9
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
110.5
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
110.3
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
109.9
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
109.4
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
109.1
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
108.8
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
108.3
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
107.5
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
107.1
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
106.3
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
106.0
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
105.9
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
105.5
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
105.5
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
105.4
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
105.1
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
104.6
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
104.4
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
104.2
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
104.0
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
103.9
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
103.9
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
103.7
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
103.7
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
103.5
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
103.2
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
103.0
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
102.8
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
102.5
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
102.0
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
101.6
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
101.5
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
101.3
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
101.3
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
101.2
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
100.8
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
100.6
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
100.6
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
100.4
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
100.2
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
100.0
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
99.9
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
99.7
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
99.7
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
99.5
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
98.6
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
98.5
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
98.4
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
97.9
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
97.9
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
97.8
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
97.6
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
97.5
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
97.0
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
96.9
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
96.5
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
95.8
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
95.4
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
94.9
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
94.8
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
94.7
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
94.7
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
94.5
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
94.1
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
94.1
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
94.1
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
94.0
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
94.0
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
93.7
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
93.7
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
93.5
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
93.2
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
92.5
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
92.5
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
92.3
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
92.3
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
92.3
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
92.2
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
92.2
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
91.7
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
91.5
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
91.3
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
91.1
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
91.1
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
91.1
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
91.1
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
91.0
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
90.9
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
90.9
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
90.8
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
90.8
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
90.4
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
90.4
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
90.3
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
90.3
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
90.2
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
90.1
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
90.1
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
89.9
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
89.7
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
89.7
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
89.5
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
89.5
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
89.3
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
88.8
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
88.5
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
88.5
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
88.2
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
87.9
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
87.4
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
87.4
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
87.3
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
87.1
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
87.1
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
87.1
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
86.8
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
86.8
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
86.5
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
86.4
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
86.4
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
86.3
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
86.3
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
86.3
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
86.1
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
86.0
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
85.8
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
85.7
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
85.6
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
85.5
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
85.4
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
85.3
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
85.2
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
84.8
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
84.5
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
84.3
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
84.2
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
84.1
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
84.1
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
84.0
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
83.8
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
83.6
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
83.6
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
83.6
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
83.6
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
83.4
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
83.1
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
83.0
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
82.9
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
82.2
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
81.1
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
81.0
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
81.0
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
80.8
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
80.8
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
80.8
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
80.6
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
80.5
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
80.4
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
80.4
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
79.9
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
79.6
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
79.5
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
79.3
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
79.2
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
79.1
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
79.0
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
78.9
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
78.9
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
78.8
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
78.7
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
78.7
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
78.0
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
77.6
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
77.6
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
77.4
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
77.3
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
77.2
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
77.1
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
77.0
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
76.9
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
76.6
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
76.6
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
76.5
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
76.4
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
76.2
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
76.1
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
76.0
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
75.7
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
75.6
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
75.6
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
75.6
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
75.5
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
75.4
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
75.4
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
75.3
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
75.1
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
75.0
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
75.0
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
75.0
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
75.0
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
74.8
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
74.8
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
74.6
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
74.2
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
74.1
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
74.1
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
74.0
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
73.9
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
73.5
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
73.4
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
73.4
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
73.4
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
73.1
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
72.9
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
72.8
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
72.8
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
72.5
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
72.5
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
72.0
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
71.8
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
71.6
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
71.2
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
71.0
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
70.8
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
70.8
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
70.8
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
70.5
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
70.3
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
70.1
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
70.0
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
70.0
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
70.0
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
69.9
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
69.9
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
69.9
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
69.8
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
69.6
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
69.5
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
69.5
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
69.0
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
68.7
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
68.5
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
68.4
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
68.4
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
68.2
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
68.0
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
67.7
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
67.4
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
67.1
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
66.9
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
66.8
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
66.6
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
66.3
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
66.2
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
66.2
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
66.0
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
65.6
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
65.6
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
65.6
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
65.1
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
64.7
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
64.6
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
64.5
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
64.0
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
63.9
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
63.5
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
63.2
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
63.2
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
63.2
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
63.1
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
62.3
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
62.2
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
61.9
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
61.7
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
61.6
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
61.6
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
61.5
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
61.3
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
61.1
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
61.1
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
61.1
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
61.1
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
60.9
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
60.7
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
60.7
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
60.6
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
60.5
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
60.2
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
60.1
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
60.1
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
60.0
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
60.0
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
59.9
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
59.0
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
58.9
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
58.8
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
58.3
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
58.3
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
58.2
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
58.1
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
57.8
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
57.8
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
57.6
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
57.5
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
57.4
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
57.4
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
57.4
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
57.3
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
57.1
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
57.0
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
55.9
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
55.9
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
55.7
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
55.7
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
55.5
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
55.2
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
55.1
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
54.8
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
53.6
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
53.3
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
53.2
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
53.1
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
52.9
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
51.9
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
51.7
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
51.7
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
51.3
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
51.1
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
51.0
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
49.3
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
49.2
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
49.1
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
48.8
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
48.2
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
47.8
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
47.7
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
47.7
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
47.5
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
47.5
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
45.5
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
44.8
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
44.4
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
44.2
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
43.3
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
43.0
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
42.5
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
42.3
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
42.1
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
42.0
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
41.8
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
41.7
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
41.3
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
41.0
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
40.8
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
40.7
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
40.4
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
40.3
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
39.9
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
38.7
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
38.6
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
38.6
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
38.5
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
38.4
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
38.2
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
38.1
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
37.5
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
36.6
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
36.6
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
36.2
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
35.8
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
34.8
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
34.8
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
34.7
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
34.5
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
34.4
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
34.1
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
32.9
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
32.6
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
32.4
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
31.6
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
31.6
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
31.6
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
31.3
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
30.9
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
30.6
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
30.4
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
30.4
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
28.8
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
28.3
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
26.7
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
26.5
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
26.1
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
25.1
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
24.5
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
22.1
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
22.1
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
21.0
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
19.9
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
19.1
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
16.9
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
16.3
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
16.1
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
14.7
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SSR3 is potential prognostic, high expression is unfavorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
112.4
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
380.4
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
286.7
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
278.8
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
270.3
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
270.1
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
213.0
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
204.3
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
200.8
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
191.9
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
186.4
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
181.1
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
178.5
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
173.7
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
171.6
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
167.3
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
165.5
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
164.7
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
153.0
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
148.5
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
144.8
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
143.4
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
139.4
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
139.2
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
136.4
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
130.5
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
128.4
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
124.7
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
123.7
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
122.5
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
121.5
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
121.1
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
120.4
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
116.7
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
115.3
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
112.8
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
112.5
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
110.9
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
109.1
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
108.3
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
108.2
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
106.3
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
105.7
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
103.9
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
103.9
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
103.5
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
102.9
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
102.4
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
102.0
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
100.4
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
99.5
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
98.1
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
97.0
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
95.8
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
95.8
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
94.6
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
94.2
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
93.0
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
92.5
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
91.4
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
90.8
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
90.5
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
90.5
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
89.2
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
87.5
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
87.2
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
86.7
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
85.8
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
82.8
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
82.6
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
82.3
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
81.1
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
80.5
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
79.1
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
78.9
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
78.8
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
78.2
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
76.9
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
72.9
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
70.5
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
69.8
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
67.0
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
66.0
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
63.4
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
62.5
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
61.5
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
60.6
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
57.8
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
57.8
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
55.9
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
54.8
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
52.8
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
52.7
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
51.7
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
50.2
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
48.1
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
45.8
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
45.4
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
40.4
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
35.8
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SSR3 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
61.5
Number of samples
282
Samples
Sample
Description
TPM
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
233.6
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
131.3
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
125.9
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
122.2
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
120.6
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
118.0
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
117.5
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
117.0
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
115.3
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
114.5
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
112.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
107.4
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
107.1
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
106.1
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
105.1
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
103.7
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
103.0
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
102.1
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
101.5
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
100.0
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
99.9
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
99.6
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
99.5
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
98.7
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
98.4
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
98.3
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
98.1
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
98.0
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
97.3
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
93.1
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
92.1
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
92.0
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
91.3
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
90.4
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
90.2
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
89.1
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
88.9
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
88.7
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
88.0
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
86.8
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
85.6
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
84.8
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
84.5
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
84.1
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
83.8
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
83.8
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
83.7
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
83.3
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
83.2
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
83.1
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
83.0
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
82.8
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
81.9
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
81.7
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
81.7
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
81.6
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
81.1
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
80.5
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
80.5
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
80.3
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
80.2
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
79.8
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
79.8
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
79.7
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
79.7
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
79.2
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
79.1
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
79.0
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
78.7
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
78.7
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
78.5
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
78.2
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
78.2
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
77.7
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
77.3
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
77.2
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
76.6
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
76.3
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
76.3
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
76.2
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
76.0
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
75.7
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
75.3
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
75.2
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
75.2
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
74.8
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
74.5
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
74.4
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
73.1
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
73.1
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
73.0
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
73.0
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
72.4
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
72.1
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
71.9
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
71.8
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
70.8
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
70.6
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
70.6
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
70.3
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
70.2
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
70.1
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
70.0
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
70.0
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
69.7
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
69.6
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
69.4
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
69.2
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
69.0
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
68.4
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
67.7
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
67.2
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
67.2
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
67.2
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
67.1
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
67.0
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
66.8
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
66.7
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
66.6
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
65.9
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
65.0
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
64.9
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
64.6
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
64.5
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
64.5
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
64.4
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
64.3
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
63.3
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
62.9
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
62.7
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
62.4
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
62.3
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
62.0
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
61.7
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
61.5
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
61.4
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
61.3
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
61.2
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
61.1
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
60.7
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
60.4
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
59.9
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
58.6
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
58.3
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
58.1
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
57.1
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
56.9
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
56.8
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
56.7
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
56.7
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
56.4
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
55.7
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
55.6
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
55.5
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
55.3
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
55.1
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
55.1
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
55.0
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
54.9
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
54.7
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
54.1
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
53.8
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
53.6
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
53.5
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
53.2
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
53.2
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
53.0
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
52.7
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
52.6
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
52.4
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
52.3
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
52.3
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
51.8
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
51.8
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
51.6
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
51.6
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
51.3
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
51.3
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
51.3
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
51.3
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
51.0
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
50.8
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
50.7
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
50.6
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
50.4
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
50.3
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
50.3
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
50.1
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
50.0
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
49.4
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
48.8
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
48.7
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
47.6
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
47.5
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
47.5
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
47.3
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
46.9
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
46.8
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
46.8
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
46.6
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
46.6
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
46.3
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
46.1
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
46.0
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
45.8
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
45.7
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
45.7
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
45.3
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
45.2
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
44.8
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
44.6
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
44.5
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
44.2
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
44.1
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
43.7
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
42.6
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
42.5
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
41.9
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
41.8
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
40.7
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
40.1
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
39.9
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
39.4
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
39.2
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
38.8
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
38.5
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
37.9
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
36.9
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
36.7
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
36.7
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
36.6
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
36.5
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
36.4
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
36.3
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
36.2
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
36.2
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
35.8
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
34.7
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
34.7
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
34.1
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
33.5
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
33.4
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
33.4
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
33.2
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
33.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
32.8
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
32.8
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
32.7
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
32.7
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
32.5
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
32.2
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
31.5
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
31.3
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
30.0
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
29.9
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
29.1
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
28.7
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
28.6
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
28.2
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
27.3
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
25.9
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
24.6
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
24.3
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
23.3
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
23.0
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
21.8
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
21.7
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
21.1
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
19.5
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
19.4
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
19.1
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
18.0
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
17.7
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
15.4
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
14.9
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
14.2
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
14.2
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
12.9
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
12.9
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
11.9
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
10.0
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
7.7
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RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0075130003
Tumor
1.5
CPT0088550004
Tumor
1.3
CPT0078800003
Tumor
1.2
CPT0087040003
Tumor
1.1
CPT0002350011
Tumor
1.1
CPT0001340003
Tumor
1.1
CPT0088690003
Tumor
1.1
CPT0001180009
Tumor
1.0
CPT0063630003
Tumor
0.9
CPT0086820003
Tumor
0.9
CPT0014160003
Tumor
0.9
CPT0089460004
Tumor
0.8
CPT0092790003
Tumor
0.8
CPT0015810003
Tumor
0.7
CPT0079410003
Tumor
0.7
CPT0088630003
Tumor
0.7
CPT0025230003
Tumor
0.7
CPT0001260009
Tumor
0.7
CPT0023350003
Tumor
0.6
CPT0092730003
Tumor
0.6
CPT0025880003
Tumor
0.6
CPT0092190003
Normal
0.6
CPT0025290003
Tumor
0.6
CPT0092290003
Tumor
0.6
CPT0066470004
Tumor
0.6
CPT0025050003
Tumor
0.6
CPT0076330003
Tumor
0.5
CPT0088480003
Tumor
0.5
CPT0007860003
Tumor
0.5
CPT0015730003
Tumor
0.5
CPT0078990003
Tumor
0.5
CPT0020120003
Tumor
0.5
CPT0065430003
Tumor
0.5
CPT0007870001
Normal
0.5
CPT0075720003
Tumor
0.5
CPT0014450004
Tumor
0.4
CPT0019990003
Tumor
0.4
CPT0088640003
Normal
0.4
CPT0086360003
Tumor
0.4
CPT0001270001
Normal
0.4
CPT0001220008
Tumor
0.4
CPT0026420001
Normal
0.4
CPT0081600003
Tumor
0.4
CPT0023690003
Tumor
0.4
CPT0079380003
Tumor
0.3
CPT0000640003
Tumor
0.3
CPT0092160003
Tumor
0.3
CPT0025110003
Tumor
0.3
CPT0088710001
Normal
0.2
CPT0010110003
Tumor
0.2
CPT0075170001
Normal
0.2
CPT0065870003
Tumor
0.2
CPT0077310003
Tumor
0.2
CPT0065690003
Tumor
0.2
CPT0007320003
Tumor
0.2
CPT0086030003
Tumor
0.2
CPT0000660001
Normal
0.2
CPT0078930003
Tumor
0.2
CPT0001230001
Normal
0.2
CPT0085670003
Tumor
0.2
CPT0084590001
Normal
0.2
CPT0079480003
Tumor
0.2
CPT0078830003
Tumor
0.2
CPT0025580004
Tumor
0.2
CPT0089020003
Tumor
0.1
CPT0001510001
Normal
0.1
CPT0019130003
Tumor
0.1
CPT0025350003
Tumor
0.1
CPT0001350001
Normal
0.1
CPT0063320003
Tumor
0.1
CPT0001500009
Tumor
0.1
CPT0078840001
Normal
0.1
CPT0065750003
Tumor
0.1
CPT0071150004
Tumor
0.1
CPT0089040001
Normal
0.1
CPT0088920001
Normal
0.1
CPT0092800003
Normal
0.1
CPT0092740003
Normal
0.1
CPT0086830003
Normal
0.1
CPT0088500001
Normal
0.1
CPT0000790001
Normal
0.1
CPT0086950003
Tumor
0.1
CPT0092310003
Normal
0.1
CPT0001190001
Normal
0.0
CPT0006530001
Normal
0.0
CPT0066480003
Tumor
0.0
CPT0081880003
Tumor
0.0
CPT0088780001
Normal
0.0
CPT0088970003
Tumor
0.0
CPT0079230003
Tumor
0.0
CPT0089480003
Normal
0.0
CPT0088570001
Normal
0.0
CPT0087050003
Normal
0.0
CPT0086370003
Normal
0.0
CPT0006900003
Tumor
0.0
CPT0002270011
Tumor
0.0
CPT0065820001
Normal
0.0
CPT0000870016
Tumor
0.0
CPT0010160003
Tumor
0.0
CPT0006950001
Normal
0.0
CPT0086890003
Normal
0.0
CPT0023360001
Normal
-0.1
CPT0086870003
Tumor
-0.1
CPT0025170003
Tumor
-0.1
CPT0088900003
Tumor
-0.1
CPT0079300001
Normal
-0.1
CPT0064370003
Tumor
-0.1
CPT0001540009
Tumor
-0.1
CPT0079430001
Normal
-0.1
CPT0023710001
Normal
-0.1
CPT0015910003
Tumor
-0.1
CPT0025920001
Normal
-0.1
CPT0078940001
Normal
-0.1
CPT0066430001
Normal
-0.1
CPT0081620001
Normal
-0.1
CPT0077320001
Normal
-0.1
CPT0010170001
Normal
-0.1
CPT0006730001
Normal
-0.1
CPT0014130001
Normal
-0.1
CPT0064400001
Normal
-0.1
CPT0006440003
Tumor
-0.1
CPT0065810003
Tumor
-0.1
CPT0077110003
Tumor
-0.1
CPT0066520001
Normal
-0.2
CPT0063330001
Normal
-0.2
CPT0000780007
Tumor
-0.2
CPT0001550001
Normal
-0.2
CPT0019160001
Normal
-0.2
CPT0079000001
Normal
-0.2
CPT0000890001
Normal
-0.2
CPT0006630003
Tumor
-0.2
CPT0020020001
Normal
-0.3
CPT0086970003
Normal
-0.3
CPT0010120001
Normal
-0.3
CPT0079270003
Tumor
-0.3
CPT0063640001
Normal
-0.3
CPT0075560003
Tumor
-0.3
CPT0007470001
Normal
-0.3
CPT0079510001
Normal
-0.3
CPT0077140001
Normal
-0.3
CPT0014370004
Tumor
-0.4
CPT0025060001
Normal
-0.4
CPT0002370001
Normal
-0.4
CPT0069160003
Tumor
-0.4
CPT0020130001
Normal
-0.4
CPT0084560003
Tumor
-0.4
CPT0078670001
Normal
-0.4
CPT0065930003
Tumor
-0.4
CPT0065450001
Normal
-0.4
CPT0014350001
Normal
-0.4
CPT0026410003
Tumor
-0.5
CPT0012180003
Tumor
-0.5
CPT0014470001
Normal
-0.5
CPT0078660003
Tumor
-0.6
CPT0012280003
Tumor
-0.6
CPT0081990003
Tumor
-0.6
CPT0078530001
Normal
-0.6
CPT0025610001
Normal
-0.6
CPT0077490003
Tumor
-0.8
CPT0069190001
Normal
-0.8
CPT0076350001
Normal
-0.8
CPT0069000003
Tumor
-0.9
CPT0069010001
Normal
-0.9
CPT0011410003
Tumor
-0.9
CPT0077500001
Normal
-0.9
CPT0082010001
Normal
-1.1
CPT0078510003
Tumor
-1.2
CPT0088760003
Tumor
-1.2
CPT0021240003
Tumor
-1.3
CPT0075570001
Normal
-1.4
CPT0012290003
Normal
-1.5
CPT0012550003
Tumor
-1.5
CPT0012370003
Tumor
-1.6
CPT0012080003
Tumor
-1.7
CPT0012670003
Tumor
-1.8
CPT0009000003
Tumor
-1.8
CPT0017850003
Tumor
-2.0
CPT0013790003
Normal
-2.1
CPT0024670003
Tumor
-2.1
CPT0009060003
Tumor
-2.2
CPT0012640003
Normal
-2.4
CPT0009020003
Normal
-2.4
CPT0017450001
Normal
-2.4
CPT0012090003
Normal
-2.5
CPT0012770003
Normal
-2.7
CPT0024680001
Normal
-2.7
CPT0012570003
Normal
-2.8
CPT0012900004
Tumor
-2.8
CPT0079180003
Tumor
-2.8
CPT0018250001
Normal
-2.8
CPT0009080003
Normal
-3.2
CPT0011240003
Tumor
-3.3
CPT0012920003
Normal
-3.3
CPT0017410003
Tumor
-3.8
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
