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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
KLHL24 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
6.1
Number of samples
362
Samples
Sample
Description
TPM
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
28.4
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
20.7
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
19.8
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
19.5
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
17.8
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
16.7
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
16.3
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
16.3
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
16.3
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
15.8
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
15.7
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
15.4
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
15.3
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
14.8
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
14.7
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
14.1
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
13.8
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
13.3
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
13.2
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
13.2
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
13.0
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
12.9
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
12.4
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
12.4
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
12.1
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
12.1
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
12.0
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
11.6
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
11.6
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
11.4
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
11.3
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
11.2
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
11.1
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
11.0
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
11.0
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
10.9
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
10.7
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
10.7
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
10.6
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
10.6
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
10.4
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
10.3
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
10.3
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
10.0
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
9.8
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
9.8
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
9.7
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
9.7
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
9.6
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
9.5
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
9.3
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
9.3
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
9.3
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
9.3
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
9.3
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
9.2
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
9.2
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
9.2
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
9.2
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
9.2
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
9.2
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
9.1
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
9.1
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
9.0
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
9.0
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
8.9
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
8.8
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
8.8
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
8.8
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
8.7
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
8.7
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
8.6
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
8.5
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
8.5
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
8.5
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
8.4
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
8.4
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
8.3
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
8.3
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
8.3
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
8.3
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
8.3
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
8.2
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
8.1
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
8.0
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
8.0
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
8.0
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
8.0
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
7.9
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
7.8
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
7.8
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
7.8
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
7.7
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
7.7
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
7.7
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
7.6
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
7.6
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
7.6
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
7.5
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
7.5
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
7.5
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
7.4
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
7.4
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
7.4
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
7.4
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
7.4
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
7.3
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
7.3
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
7.2
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
7.2
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
7.2
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
7.2
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
7.1
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
7.1
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
7.0
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
7.0
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
7.0
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
7.0
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
6.9
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
6.9
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
6.9
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
6.9
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
6.9
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
6.8
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
6.8
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
6.8
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
6.8
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
6.7
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
6.7
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
6.7
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
6.6
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
6.6
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
6.6
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
6.6
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
6.6
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
6.5
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
6.5
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
6.5
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
6.5
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
6.4
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
6.4
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
6.4
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
6.4
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
6.4
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
6.3
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
6.3
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
6.3
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
6.3
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
6.3
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
6.3
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
6.2
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
6.2
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
6.2
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
6.2
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
6.2
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
6.1
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
6.0
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
6.0
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
6.0
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
6.0
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
6.0
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
6.0
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
5.9
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
5.9
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
5.9
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
5.8
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
5.8
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
5.8
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
5.8
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
5.8
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
5.7
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
5.7
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
5.7
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
5.7
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
5.7
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
5.7
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
5.6
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
5.6
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
5.6
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
5.5
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
5.5
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
5.5
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
5.5
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
5.5
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
5.5
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
5.4
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
5.4
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
5.4
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
5.4
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
5.4
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
5.4
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
5.4
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
5.3
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
5.3
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
5.3
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
5.2
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
5.2
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
5.2
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
5.2
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
5.2
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
5.1
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
5.1
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
5.1
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
5.1
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
5.1
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
5.1
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
5.0
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
5.0
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
5.0
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
5.0
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
4.9
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
4.9
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
4.9
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
4.9
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
4.9
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
4.9
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
4.9
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
4.9
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
4.8
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
4.8
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
4.7
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
4.7
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
4.7
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
4.7
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
4.7
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
4.6
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
4.6
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
4.5
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
4.5
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
4.5
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
4.5
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
4.5
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
4.4
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
4.4
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
4.4
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
4.4
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
4.3
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
4.3
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
4.3
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
4.2
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
4.2
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
4.2
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
4.2
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
4.1
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
4.1
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
4.1
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
4.0
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
4.0
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
4.0
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
4.0
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
3.9
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
3.9
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
3.9
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
3.9
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
3.9
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
3.8
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
3.8
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
3.8
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
3.8
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
3.7
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
3.7
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
3.7
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
3.7
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
3.6
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
3.6
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
3.6
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
3.6
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
3.6
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
3.5
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
3.5
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
3.5
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
3.5
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
3.4
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
3.4
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
3.4
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
3.3
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
3.3
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
3.3
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
3.3
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
3.3
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
3.3
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
3.2
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
3.2
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
3.2
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
3.2
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
3.2
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
3.1
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
3.1
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
3.1
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
3.1
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
3.1
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
3.0
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
3.0
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
2.9
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
2.9
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
2.9
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
2.9
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
2.9
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
2.9
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
2.8
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
2.8
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
2.8
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
2.8
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
2.7
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
2.7
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
2.7
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
2.7
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
2.6
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
2.6
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
2.6
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
2.6
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
2.6
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
2.5
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
2.5
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
2.4
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
2.4
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
2.3
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
2.3
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
2.3
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
2.3
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
2.2
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
2.2
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
2.2
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
2.2
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
2.1
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
2.1
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
2.1
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
2.1
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
2.1
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
2.0
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
1.9
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
1.9
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
1.9
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
1.8
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
1.8
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
1.8
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
1.8
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
1.8
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
1.7
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
1.7
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
1.7
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
1.6
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
1.6
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
1.6
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
1.6
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
1.5
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
1.5
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
1.4
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
1.3
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
1.3
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
1.3
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
1.3
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
1.1
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
1.1
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
0.9
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
0.8
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
0.8
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
0.8
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
0.7
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
0.7
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
0.6
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
KLHL24 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
7.4
Number of samples
231
Samples
Sample
Description
TPM
DO45189
0 years, female, NA, stage:2, alive, 1200 days
31.0
DO23509
0 years, male, NA, stage:3, dead, 780 days
29.7
DO45283
0 years, male, NA, stage:3, alive, 510 days
26.1
DO23533
0 years, male, NA, stage:2, alive, 900 days
24.2
DO23542
0 years, male, NA, stage:3, alive, 960 days
17.4
DO48746
0 years, male, NA, stage:3, alive, 570 days
15.8
DO45197
0 years, male, NA, stage:2, alive, 1170 days
14.7
DO23521
0 years, male, NA, stage:3, alive, 1110 days
14.2
DO45299
0 years, female, NA, stage:1, alive, 1440 days
13.9
DO50798
0 years, male, NA, stage:3, dead, 30 days
12.8
DO50774
0 years, female, NA, stage:2, alive, 720 days
12.3
DO45121
0 years, male, NA, stage:3, alive, 1530 days
12.3
DO23528
0 years, female, NA, stage:2, alive, 1020 days
12.3
DO23524
0 years, female, NA, stage:2, alive, 1050 days
12.1
DO50791
0 years, female, NA, stage:1, dead, 480 days
12.0
DO45207
0 years, male, NA, stage:1, alive, 1050 days
11.9
DO45223
0 years, male, NA, stage:4, alive, 1020 days
11.8
DO45277
0 years, male, NA, stage:3, alive, 600 days
11.8
DO45303
0 years, female, NA, stage:3, alive, 990 days
11.7
DO48677
0 years, male, NA, stage:3, alive, 1140 days
11.6
DO45131
0 years, male, NA, stage:4, dead, 360 days
11.4
DO45187
0 years, female, NA, stage:1, alive, 1260 days
11.1
DO45111
0 years, male, NA, stage:2, alive, 1590 days
11.1
DO45127
0 years, male, NA, stage:3, dead, 420 days
11.1
DO23523
0 years, male, NA, stage:3, alive, 1080 days
11.0
DO45205
0 years, female, NA, stage:2, dead, 90 days
11.0
DO45259
0 years, male, NA, stage:3, alive, 330 days
11.0
DO48720
0 years, female, NA, stage:2, alive, 570 days
10.8
DO50859
0 years, male, NA, stage:2, alive, 180 days
10.7
DO50787
0 years, male, NA, stage:3, alive, 480 days
10.7
DO45091
0 years, male, NA, stage:2, dead, 1320 days
10.7
DO45219
0 years, male, NA, stage:2, alive, 1080 days
10.6
DO23535
0 years, male, NA, stage:1, alive, 960 days
10.6
DO45257
0 years, male, NA, stage:3, alive, 810 days
10.5
DO45267
0 years, male, NA, stage:3, dead, 570 days
10.5
DO45263
0 years, male, NA, stage:3, dead, 270 days
10.5
DO45163
0 years, male, NA, stage:2, alive, 960 days
10.3
DO50799
0 years, female, NA, stage:2, alive, 540 days
10.1
DO45279
0 years, male, NA, stage:3, alive, 1290 days
10.1
DO45137
0 years, male, NA, stage:1, alive, 1320 days
10.0
DO45231
0 years, male, NA, stage:2, alive, 930 days
10.0
DO48721
0 years, female, NA, stage:1, alive, 900 days
9.8
DO23548
0 years, female, NA, stage:1, alive, 840 days
9.8
DO48712
0 years, male, NA, stage:2, alive, 810 days
9.8
DO23514
0 years, male, NA, stage:2, alive, 1290 days
9.8
DO45213
0 years, male, NA, stage:1, alive, 1200 days
9.7
DO23547
0 years, male, NA, stage:1, alive, 1020 days
9.5
DO23552
0 years, female, NA, stage:1, alive, 810 days
9.5
DO50857
0 years, male, NA, stage:2, alive, 210 days
9.5
DO45119
0 years, male, NA, stage:3, dead, 510 days
9.5
DO45133
0 years, male, NA, stage:3, dead, 660 days
9.5
DO23513
0 years, male, NA, stage:3, alive, 1200 days
9.4
DO23538
0 years, male, NA, stage:2, alive, 450 days
9.4
DO45107
0 years, female, NA, stage:2, alive, 1710 days
9.4
DO48672
0 years, male, NA, stage:2, alive, 450 days
9.3
DO48730
0 years, female, NA, stage:2, alive, 630 days
9.3
DO45171
0 years, male, NA, stage:3, alive, 600 days
9.2
DO45301
0 years, male, NA, stage:2, dead, 1440 days
9.2
DO45141
0 years, male, NA, stage:2, alive, 1320 days
9.0
DO50817
0 years, male, NA, stage:2, alive, 390 days
8.9
DO45253
0 years, male, NA, stage:2, alive, 870 days
8.9
DO23546
0 years, male, NA, stage:2, alive, 1050 days
8.9
DO23510
0 years, female, NA, stage:2, alive, 870 days
8.9
DO50778
0 years, male, NA, stage:4, alive, 630 days
8.8
DO45273
0 years, male, NA, stage:2, alive, 480 days
8.8
DO50800
0 years, male, NA, stage:2, alive, 510 days
8.8
DO50832
0 years, male, NA, stage:3, alive, 90 days
8.7
DO45237
0 years, male, NA, stage:2, alive, 900 days
8.7
DO45105
0 years, male, NA, stage:1, alive, 1680 days
8.7
DO48719
0 years, male, NA, stage:2, alive, 690 days
8.7
DO45215
0 years, male, NA, stage:2, alive, 1170 days
8.7
DO45281
0 years, male, NA, stage:4, alive, 750 days
8.5
DO23541
0 years, male, NA, stage:2, alive, 930 days
8.5
DO45129
0 years, male, NA, stage:3, alive, 1470 days
8.4
DO45115
0 years, male, NA, stage:2, alive, 840 days
8.4
DO45177
0 years, female, NA, stage:3, alive, 1260 days
8.2
DO45123
0 years, female, NA, stage:2, dead, 570 days
8.2
DO45251
0 years, female, NA, stage:2, alive, 900 days
8.1
DO45249
0 years, male, NA, stage:1, alive, 630 days
8.0
DO48728
0 years, female, NA, stage:2, alive, 150 days
8.0
DO48732
0 years, male, NA, stage:3, alive, 630 days
8.0
DO227643
0 years, male, NA, stage:2, alive, 1260 days
8.0
DO45185
0 years, male, NA, stage:2, alive, 600 days
7.9
DO45117
0 years, female, NA, stage:2, dead, 1110 days
7.9
DO45261
0 years, male, NA, stage:3, alive, 990 days
7.9
DO45245
0 years, female, NA, stage:2, dead, 240 days
7.9
DO45225
0 years, male, NA, stage:1, alive, 1050 days
7.9
DO45297
0 years, female, NA, stage:4, dead, 1260 days
7.8
DO45203
0 years, female, NA, stage:2, alive, 1170 days
7.8
DO23534
0 years, male, NA, stage:2, alive, 840 days
7.8
DO48704
0 years, female, NA, stage:3, alive, 750 days
7.7
DO50829
0 years, male, NA, stage:3, alive, 570 days
7.7
DO23512
0 years, male, NA, stage:1, alive, 1260 days
7.6
DO45103
0 years, male, NA, stage:3, alive, 450 days
7.6
DO50789
0 years, female, NA, stage:2, alive, 570 days
7.6
DO48733
0 years, male, NA, stage:2, alive, 600 days
7.5
DO45247
0 years, female, NA, stage:2, alive, 210 days
7.5
DO48716
0 years, male, NA, stage:2, alive, 720 days
7.5
DO48717
0 years, male, NA, stage:4, dead, 180 days
7.5
DO23536
0 years, male, NA, stage:2, alive, 930 days
7.5
DO45155
0 years, male, NA, stage:2, alive, 2160 days
7.4
DO50820
0 years, female, NA, stage:3, alive, 510 days
7.4
DO23518
0 years, male, NA, stage:2, alive, 1320 days
7.3
DO48742
0 years, male, NA, stage:2, alive, 600 days
7.3
DO45173
0 years, male, NA, stage:3, alive, 1170 days
7.3
DO23549
0 years, male, NA, stage:3, alive, 990 days
7.2
DO45235
0 years, female, NA, stage:1, alive, 900 days
7.2
DO23545
0 years, male, NA, stage:2, dead, 570 days
7.2
DO45217
0 years, female, NA, stage:3, dead, 270 days
7.1
DO45211
0 years, male, NA, stage:3, alive, 240 days
7.1
DO23527
0 years, male, NA, stage:1, alive, 1050 days
7.0
DO48741
0 years, male, NA, stage:3, alive, 240 days
7.0
DO45169
0 years, male, NA, stage:3, alive, 1350 days
7.0
DO45093
0 years, male, NA, stage:2, dead, 720 days
7.0
DO45135
0 years, male, NA, stage:1, alive, 1410 days
6.9
DO45153
0 years, female, NA, stage:2, alive, 1380 days
6.9
DO45221
0 years, female, NA, stage:4, dead, 390 days
6.9
DO50840
0 years, male, NA, stage:2, alive, 330 days
6.9
DO45094
0 years, male, NA, stage:3, alive, 1650 days
6.9
DO48695
0 years, male, NA, stage:2, alive, 720 days
6.9
DO45287
0 years, male, NA, stage:1, alive, 390 days
6.8
DO48761
0 years, male, NA, stage:2, alive, 870 days
6.8
DO45179
0 years, female, NA, stage:2, alive, 600 days
6.8
DO45201
0 years, male, NA, stage:1, alive, 900 days
6.6
DO45175
0 years, male, NA, stage:2, alive, 1140 days
6.6
DO45191
0 years, female, NA, stage:2, alive, 1200 days
6.6
DO45139
0 years, male, NA, stage:3, alive, 1320 days
6.6
DO45243
0 years, female, NA, stage:3, alive, 930 days
6.5
DO45227
0 years, female, NA, stage:2, alive, 1020 days
6.5
DO48760
0 years, female, NA, stage:2, alive, 690 days
6.5
DO45233
0 years, male, NA, stage:3, alive, 900 days
6.5
DO45275
0 years, male, NA, stage:3, dead, 10 days
6.4
DO45159
0 years, male, NA, stage:3, alive, 1470 days
6.4
DO23516
0 years, male, NA, stage:3, dead, 20 days
6.4
DO227801
0 years, female, NA, stage:1, alive, 660 days
6.3
DO50809
0 years, male, NA, stage:3, dead, 720 days
6.3
DO45092
0 years, male, NA, stage:4, dead, 1200 days
6.3
DO50803
0 years, female, NA, stage:1, alive, 540 days
6.3
DO23531
0 years, female, NA, stage:3, alive, 900 days
6.3
DO50850
0 years, male, NA, stage:3, alive, 720 days
6.2
DO45239
0 years, male, NA, stage:2, alive, 870 days
6.2
DO48751
0 years, male, NA, stage:2, dead, 480 days
6.2
DO50802
0 years, male, NA, stage:2, alive, 930 days
6.2
DO45265
0 years, male, NA, stage:3, alive, 1020 days
6.1
DO23526
0 years, male, NA, stage:3, alive, 1050 days
6.1
DO45305
0 years, male, NA, stage:4, alive, 300 days
6.0
DO48701
0 years, male, NA, stage:2, alive, 780 days
6.0
DO48679
0 years, male, NA, stage:2, alive, 1200 days
5.9
DO50811
0 years, male, NA, stage:1, alive, 450 days
5.9
DO45157
0 years, male, NA, stage:2, alive, 1980 days
5.9
DO50807
0 years, male, NA, stage:1, alive, 540 days
5.8
DO50819
0 years, female, NA, stage:2, alive, 510 days
5.8
DO23517
0 years, male, NA, stage:2, alive, 1200 days
5.8
DO23539
0 years, male, NA, stage:1, alive, 1110 days
5.8
DO50855
0 years, male, NA, stage:2, alive, 570 days
5.8
DO23508
0 years, female, NA, stage:2, alive, 390 days
5.8
DO23550
0 years, male, NA, stage:1, alive, 990 days
5.7
DO45269
0 years, male, NA, stage:3, alive, 750 days
5.7
DO45125
0 years, male, NA, stage:3, alive, 1680 days
5.6
DO45193
0 years, female, NA, stage:4, dead, 120 days
5.6
DO45099
0 years, male, NA, stage:3, alive, 1590 days
5.6
DO50806
0 years, male, NA, stage:4, alive, 540 days
5.5
DO50804
0 years, male, NA, stage:2, alive, 720 days
5.5
DO48736
0 years, female, NA, stage:1, alive, 600 days
5.5
DO48757
0 years, female, NA, stage:3, alive, 480 days
5.5
DO45289
0 years, female, NA, stage:3, alive, 360 days
5.4
DO45113
0 years, male, NA, stage:3, alive, 1560 days
5.4
DO48706
0 years, male, NA, stage:2, alive, 870 days
5.4
DO23529
0 years, male, NA, stage:4, alive, 930 days
5.2
DO48682
0 years, female, NA, stage:3, dead, 120 days
5.2
DO45101
0 years, male, NA, stage:2, alive, 1680 days
5.2
DO50793
0 years, male, NA, stage:4, alive, 540 days
5.2
DO45143
0 years, male, NA, stage:3, alive, 1290 days
5.0
DO48725
0 years, male, NA, stage:1, alive, 780 days
5.0
DO23530
0 years, male, NA, stage:4, dead, 180 days
5.0
DO45096
0 years, male, NA, stage:2, dead, 1290 days
5.0
DO50813
0 years, male, NA, stage:2, alive, 420 days
4.9
DO50822
0 years, male, NA, stage:2, alive, 510 days
4.9
DO23537
0 years, male, NA, stage:2, dead, 900 days
4.9
DO23543
0 years, male, NA, stage:2, alive, 1020 days
4.9
DO50844
0 years, male, NA, stage:4, alive, 300 days
4.8
DO50805
0 years, male, NA, stage:2, alive, 690 days
4.8
DO45097
0 years, male, NA, stage:3, alive, 1620 days
4.7
DO50815
0 years, male, NA, stage:3, alive, 150 days
4.7
DO45183
0 years, female, NA, stage:2, dead, 570 days
4.6
DO50783
0 years, male, NA, stage:3, alive, 480 days
4.6
DO45161
0 years, male, NA, stage:2, dead, 540 days
4.6
DO48681
0 years, male, NA, stage:2, alive, 900 days
4.6
DO50845
0 years, male, NA, stage:3, alive, 210 days
4.5
DO50818
0 years, male, NA, stage:2, alive, 510 days
4.4
DO23532
0 years, female, NA, stage:1, alive, 960 days
4.4
DO48700
0 years, female, NA, stage:2, alive, 810 days
4.4
DO45255
0 years, male, NA, stage:3, alive, 720 days
4.3
DO45241
0 years, male, NA, stage:1, alive, 1080 days
4.3
DO48723
0 years, male, NA, stage:1, alive, 600 days
4.3
DO50816
0 years, male, NA, stage:2, alive, 390 days
4.2
DO45095
0 years, male, NA, stage:2, alive, 1620 days
4.2
DO48727
0 years, female, NA, stage:2, dead, 390 days
4.1
DO45209
0 years, male, NA, stage:4, alive, 1350 days
4.1
DO48693
0 years, male, NA, stage:2, alive, 900 days
4.0
DO23515
0 years, male, NA, stage:2, alive, 1230 days
4.0
DO45307
0 years, female, NA, stage:4, dead, 240 days
3.9
DO45165
0 years, male, NA, stage:2, alive, 690 days
3.9
DO45149
0 years, female, NA, stage:2, alive, 1260 days
3.8
DO45181
0 years, female, NA, stage:2, alive, 1200 days
3.8
DO50776
0 years, male, NA, stage:1, alive, 690 days
3.7
DO48697
0 years, female, NA, stage:2, dead, 810 days
3.7
DO45167
0 years, male, NA, stage:2, dead, 1440 days
3.6
DO50785
0 years, male, NA, stage:4, dead, 90 days
3.6
DO48737
0 years, male, NA, stage:1, alive, 720 days
3.5
DO23540
0 years, male, NA, stage:1, alive, 750 days
3.5
DO50808
0 years, male, NA, stage:2, alive, 570 days
3.5
DO23551
0 years, male, NA, stage:3, dead, 150 days
3.4
DO45199
0 years, female, NA, stage:2, alive, 1350 days
3.4
DO48759
0 years, male, NA, stage:3, alive, 720 days
3.4
DO45145
0 years, male, NA, stage:3, dead, 60 days
3.3
DO45195
0 years, male, NA, stage:1, alive, 390 days
3.3
DO48743
0 years, female, NA, stage:2, alive, 570 days
3.1
DO45229
0 years, male, NA, stage:1, alive, 990 days
3.1
DO45109
0 years, male, NA, stage:2, alive, 1590 days
3.0
DO48674
0 years, male, NA, stage:2, alive, 1260 days
2.8
DO50825
0 years, male, NA, stage:2, alive, 390 days
2.8
DO48715
0 years, female, NA, stage:2, dead, 690 days
2.7
DO50814
0 years, male, NA, stage:3, alive, 420 days
2.5
DO23519
0 years, male, NA, stage:3, alive, 630 days
2.5
DO48747
0 years, male, NA, stage:3, alive, 540 days
2.4
DO45285
0 years, male, NA, stage:3, alive, 480 days
2.2
DO23544
0 years, male, NA, stage:2, alive, 960 days
2.0
DO23525
0 years, male, NA, stage:4, alive, 1050 days
1.8
DO23511
0 years, female, NA, stage:3, dead, 180 days
1.7
DO50839
0 years, female, NA, stage:3, alive, 330 days
1.6
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
258
Normal
2.4
268
Normal
1.9
913
Tumor
1.8
666
Normal
1.7
981
Tumor
1.6
231
Tumor
1.6
642
Normal
1.4
388
Normal
1.4
272
Normal
1.4
278
Normal
1.3
232
Normal
1.2
635
Tumor
1.2
648
Normal
1.2
664
Normal
1.2
314
Normal
1.2
627
Tumor
1.2
396
Normal
1.1
618
Normal
1.1
662
Normal
1.1
262
Normal
1.1
393
Tumor
1.0
615
Tumor
1.0
636
Normal
0.9
617
Tumor
0.9
332
Normal
0.9
328
Normal
0.9
331
Tumor
0.9
312
Normal
0.9
672
Normal
0.9
394
Normal
0.9
386
Normal
0.8
616
Normal
0.8
462
Normal
0.8
222
Normal
0.7
392
Normal
0.7
533
Tumor
0.7
217
Tumor
0.7
491
Tumor
0.7
162
Normal
0.7
387
Tumor
0.7
172
Normal
0.7
982
Normal
0.6
186
Normal
0.6
911
Tumor
0.6
261
Tumor
0.5
477
Tumor
0.5
574
Normal
0.5
214
Normal
0.5
538
Normal
0.5
192
Normal
0.5
493
Tumor
0.5
391
Tumor
0.5
568
Normal
0.5
188
Normal
0.5
148
Normal
0.4
267
Tumor
0.4
492
Normal
0.4
563
Tumor
0.4
534
Normal
0.4
874
Normal
0.4
218
Normal
0.4
298
Normal
0.4
665
Tumor
0.4
195
Tumor
0.4
474
Normal
0.4
257
Tumor
0.3
221
Tumor
0.3
528
Normal
0.3
564
Normal
0.3
191
Tumor
0.3
196
Normal
0.3
1041
Tumor
0.3
488
Normal
0.3
527
Tumor
0.3
571
Tumor
0.3
537
Tumor
0.3
864
Normal
0.2
497
Tumor
0.2
572
Normal
0.2
498
Normal
0.2
661
Tumor
0.2
484
Normal
0.2
478
Normal
0.2
546
Normal
0.2
558
Normal
0.2
877
Tumor
0.2
213
Tumor
0.2
487
Tumor
0.2
483
Tumor
0.2
978
Normal
0.2
494
Normal
0.2
471
Tumor
0.2
327
Tumor
0.1
187
Tumor
0.1
416
Normal
0.1
364
Normal
0.1
1027
Tumor
0.1
882
Normal
0.1
878
Normal
0.1
567
Tumor
0.1
472
Normal
0.1
171
Tumor
0.1
663
Tumor
0.0
573
Tumor
0.0
557
Tumor
0.0
482
Normal
0.0
914
Normal
0.0
161
Tumor
0.0
297
Tumor
0.0
461
Tumor
0.0
412
Normal
0.0
185
Tumor
0.0
1016
Normal
0.0
1014
Normal
0.0
271
Tumor
0.0
481
Tumor
0.0
628
Normal
0.0
671
Tumor
0.0
1042
Normal
0.0
554
Normal
-0.1
723
Tumor
-0.1
912
Normal
-0.1
473
Tumor
-0.1
883
Tumor
-0.1
395
Tumor
-0.1
866
Normal
-0.2
553
Tumor
-0.2
147
Tumor
-0.2
311
Tumor
-0.2
884
Normal
-0.2
1026
Normal
-0.2
861
Tumor
-0.3
881
Tumor
-0.3
1032
Normal
-0.3
415
Tumor
-0.3
862
Normal
-0.3
545
Tumor
-0.3
356
Normal
-0.4
742
Normal
-0.4
647
Tumor
-0.5
1028
Normal
-0.5
641
Tumor
-0.5
363
Tumor
-0.5
313
Tumor
-0.5
984
Normal
-0.5
863
Tumor
-0.6
873
Tumor
-0.6
1022
Normal
-0.6
277
Tumor
-0.6
385
Tumor
-0.6
355
Tumor
-0.7
1025
Tumor
-0.7
867
Tumor
-0.7
728
Normal
-0.8
1021
Tumor
-0.8
868
Normal
-0.8
1015
Tumor
-0.8
738
Normal
-0.8
411
Tumor
-0.9
737
Tumor
-0.9
1031
Tumor
-0.9
727
Tumor
-1.0
744
Normal
-1.1
977
Tumor
-1.1
983
Tumor
-1.1
865
Tumor
-1.3
1013
Tumor
-1.6
724
Normal
-2.2
741
Tumor
-2.2
743
Tumor
-2.4
351
Tumor
N/A
352
Normal
N/A
111
Normal
N/A
353
Tumor
N/A
112
Tumor
N/A
354
Normal
N/A
113
Tumor
N/A
114
Normal
N/A
357
Tumor
N/A
358
Normal
N/A
915
Tumor
N/A
916
Normal
N/A
917
Tumor
N/A
918
Normal
N/A
361
Tumor
N/A
362
Normal
N/A
123
Tumor
N/A
365
Tumor
N/A
124
Normal
N/A
366
Normal
N/A
125
Tumor
N/A
367
Tumor
N/A
126
Normal
N/A
368
Normal
N/A
127
Tumor
N/A
128
Normal
N/A
921
Tumor
N/A
922
Normal
N/A
923
Tumor
N/A
924
Normal
N/A
925
Tumor
N/A
926
Normal
N/A
131
Tumor
N/A
132
Normal
N/A
375
Tumor
N/A
376
Normal
N/A
135
Tumor
N/A
136
Normal
N/A
137
Tumor
N/A
138
Normal
N/A
813
Tumor
N/A
814
Normal
N/A
815
Tumor
N/A
816
Normal
N/A
937
Tumor
N/A
817
Tumor
N/A
938
Normal
N/A
818
Normal
N/A
141
Tumor
N/A
383
Tumor
N/A
142
Normal
N/A
384
Normal
N/A
145
Tumor
N/A
146
Normal
N/A
943
Tumor
N/A
823
Tumor
N/A
944
Normal
N/A
824
Normal
N/A
951
Tumor
N/A
952
Normal
N/A
953
Tumor
N/A
954
Normal
N/A
713
Tumor
N/A
955
Tumor
N/A
714
Normal
N/A
956
Normal
N/A
715
Tumor
N/A
957
Tumor
N/A
716
Normal
N/A
958
Normal
N/A
283
Tumor
N/A
284
Normal
N/A
285
Tumor
N/A
286
Normal
N/A
721
Tumor
N/A
963
Tumor
N/A
722
Normal
N/A
964
Normal
N/A
965
Tumor
N/A
966
Normal
N/A
967
Tumor
N/A
968
Normal
N/A
1044
Normal
N/A
1043
Tumor
N/A
851
Tumor
N/A
852
Normal
N/A
975
Tumor
N/A
976
Normal
N/A
857
Tumor
N/A
858
Normal
N/A
1046
Normal
N/A
1045
Tumor
N/A
745
Tumor
N/A
746
Normal
N/A
513
Tumor
N/A
755
Tumor
N/A
514
Normal
N/A
756
Normal
N/A
515
Tumor
N/A
516
Normal
N/A
517
Tumor
N/A
518
Normal
N/A
523
Tumor
N/A
524
Normal
N/A
525
Tumor
N/A
526
Normal
N/A
413
Tumor
N/A
414
Normal
N/A
535
Tumor
N/A
777
Tumor
N/A
536
Normal
N/A
778
Normal
N/A
421
Tumor
N/A
422
Normal
N/A
785
Tumor
N/A
423
Tumor
N/A
786
Normal
N/A
424
Normal
N/A
425
Tumor
N/A
426
Normal
N/A
427
Tumor
N/A
428
Normal
N/A
431
Tumor
N/A
432
Normal
N/A
433
Tumor
N/A
434
Normal
N/A
435
Tumor
N/A
436
Normal
N/A
443
Tumor
N/A
685
Tumor
N/A
444
Normal
N/A
686
Normal
N/A
445
Tumor
N/A
446
Normal
N/A
447
Tumor
N/A
448
Normal
N/A
451
Tumor
N/A
452
Normal
N/A
211
Tumor
N/A
695
Tumor
N/A
212
Normal
N/A
696
Normal
N/A
455
Tumor
N/A
697
Tumor
N/A
456
Normal
N/A
698
Normal
N/A
341
Tumor
N/A
342
Normal
N/A
463
Tumor
N/A
343
Tumor
N/A
464
Normal
N/A
223
Tumor
N/A
344
Normal
N/A
465
Tumor
N/A
224
Normal
N/A
466
Normal
N/A
467
Tumor
N/A
468
Normal
N/A
227
Tumor
N/A
228
Normal
N/A
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
