HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:6.9 nTPM
HPA Brain:10.5 nTPM
GTEx:6.9 nTPM
FANTOM5:16.3 Scaled Tags Per Million
Pig:5.2 nTPM
Mouse:1.3 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA016908
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 10.5
Sample id Sample description nTPM
Hippocampus
nTPM: 8.2
1911 Female, age 85, right hemisphere 10.8
1898 Male, age 80, left hemisphere 8.7
2148 Female, age 91, left hemisphere 8.6
2621 Female, age 67, right hemisphere 7.6
2529 Female, age 94, left hemisphere 7.3
1855 Male, age 76, left hemisphere 6.5
Dentate gyrus
nTPM: 9.0
2010 Male, age 76, both hemispheres 10.6
2246 Female, age 85, both hemispheres 10.0
2528 Male, age 74, both hemispheres 9.9
2530 Female, age 94, left hemisphere 8.8
1927 Female, age 91, both hemispheres 7.5
2531 Female, age 67, both hemispheres 7.4
Entorhinal gyrus
nTPM: 7.8
1938 Female, age 85, left hemisphere 8.7
2117 Female, age 91, right hemisphere 8.4
2686 Male, age 75, right hemisphere 8.4
1787 Male, age 76, left hemisphere 7.4
2613 Female, age 94, left hemisphere 7.1
2764 Male, age 80, right hemisphere 6.7
Hippocampus, CA1
nTPM: 9.7
2082 Female, age 91, right hemisphere 18.9
1873 Female, age 85, both hemispheres 8.0
2527 Male, age 74, both hemispheres 8.0
2749 Male, age 80, left hemisphere 7.0
2045 Male, age 76, both hemispheres 6.5
Hippocampus, CA2
nTPM: 10.5
2249 Male, age 74, both hemispheres 17.5
1940 Female, age 85, left hemisphere 13.9
2113 Female, age 91, right hemisphere 11.6
2437 Female, age 94, left hemisphere 7.6
1963 Male, age 80, left hemisphere 6.6
1892 Male, age 76, both hemispheres 6.0
Hippocampus, CA3
nTPM: 10.0
2436 Male, age 74, both hemispheres 19.5
2137 Male, age 80, left hemisphere 9.7
2620 Female, age 94, left hemisphere 8.6
1891 Female, age 85, both hemispheres 8.1
2861 Female, age 67, both hemispheres 7.0
1867 Male, age 76, both hemispheres 6.8
Parahippocampal cortex
nTPM: 7.9
2250 Female, age 67, right hemisphere 8.6
2693 Female, age 94, both hemispheres 8.6
2245 Female, age 91, both hemispheres 8.4
1850 Male, age 80, both hemispheres 8.2
1933 Female, age 85, both hemispheres 8.1
1990 Female, age 91, right hemisphere 8.1
2622 Female, age 67, right hemisphere 7.9
2018 Male, age 76, both hemispheres 7.7
2692 Male, age 74, both hemispheres 7.7
2532 Female, age 72, left hemisphere 5.6
Perirhinal gyrus
nTPM: 7.9
1794 Male, age 80, right hemisphere 8.4
2521 Female, age 94, right hemisphere 8.2
1841 Female, age 85, right hemisphere 7.9
1847 Female, age 91, left hemisphere 7.7
2848 Male, age 76, right hemisphere 7.6
Subiculum
nTPM: 7.9
2042 Male, age 76, both hemispheres 9.2
2729 Female, age 91, right hemisphere 9.1
2619 Male, age 74, both hemispheres 8.1
1901 Male, age 80, both hemispheres 7.7
1977 Female, age 85, both hemispheres 7.2
2438 Female, age 94, left hemisphere 6.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 6.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 6.9
Samples: 197

Max nTPM: 43.4
Min nTPM: 1.8
Std nTPM: 5.6
Median nTPM: 5.1
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 43.4
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 36.2
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 28.1
GTEX-1I1HK-0011-R1b-SM-CM2T7 60-69 years, male 27.6
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 27.4
GTEX-14E7W-0011-R1b-SM-5YYAT 70-79 years, male 23.3
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 19.1
GTEX-1B933-0011-R1b-SM-9QEGW 50-59 years, female 18.8
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 18.0
GTEX-QVJO-0011-R1A-SM-2S1QI 60-69 years, female 17.6
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 16.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 16.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 16.3
FF:10153-102I9 76 years, female 21.2
FF:10169-103B7 60 years, female 11.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 5.2
Pig sample Sample description nTPM
Subiculum
nTPM: 4.4
Samples: 4

Max nTPM: 4.8
Min nTPM: 4.1
Sample A Female 4.1
Sample B Female 4.5
Sample C Male 4.8
Sample D Male 4.3
Dorsal hippocampus
nTPM: 5.2
Samples: 4

Max nTPM: 6.1
Min nTPM: 4.4
Sample A Female 6.1
Sample B Female 4.7
Sample C Male 5.5
Sample D Male 4.4
Entorhinal cortex
nTPM: 3.9
Samples: 4

Max nTPM: 4.4
Min nTPM: 3.3
Sample A Female 4.4
Sample B Female 4.1
Sample C Male 3.8
Sample D Male 3.3
Ventral hippocampus
nTPM: 4.9
Samples: 4

Max nTPM: 6.3
Min nTPM: 4.3
Sample A Female 6.3
Sample B Female 4.7
Sample C Male 4.3
Sample D Male 4.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 1.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 0.9
Samples: 4

Max nTPM: 1.4
Min nTPM: 0.5
Sample A Male 1.4
Sample B Male 0.9
Sample C Female 0.8
Sample D Female 0.5
Hippocampal formation
nTPM: 1.3
Samples: 4

Max nTPM: 1.4
Min nTPM: 1.0
Sample A Male 1.4
Sample B Male 1.0
Sample C Female 1.4
Sample D Female 1.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
69782180 Antisense, RP_050505_02_E02, Mouse strain C57BL/6J (56 days, male) 0.0

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