We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SNX4 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
8.9
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
32.1
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
23.2
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
22.2
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
20.3
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
20.1
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
18.4
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
16.8
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
16.7
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
13.0
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
12.7
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
12.5
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
12.2
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
12.1
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
11.0
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
10.9
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
10.9
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
10.7
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
10.5
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
10.1
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
9.8
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
9.7
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
9.5
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
9.3
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
9.2
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
9.2
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
8.9
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
8.8
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
8.6
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
8.4
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
8.3
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
8.3
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
8.2
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
7.8
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
7.5
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
7.5
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
7.3
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
6.9
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
6.7
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
6.4
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
6.4
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
6.3
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
6.1
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
5.9
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
5.8
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
5.5
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
5.4
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
5.0
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
5.0
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
5.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
4.8
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
4.7
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
4.6
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
4.6
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
4.6
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
4.5
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
4.4
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
4.3
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
4.2
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
4.0
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
3.6
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
3.5
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
2.8
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
2.3
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SNX4 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
20.6
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
96.7
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
75.2
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
50.5
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
44.9
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
44.3
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
42.5
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
42.0
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
41.1
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
41.1
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
40.8
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
40.1
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
39.5
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
39.1
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
38.9
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
38.9
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
38.8
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
38.7
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
38.5
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
38.4
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
38.2
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
38.2
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
38.0
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
37.9
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
37.6
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
37.5
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
37.4
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
36.8
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
36.5
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
36.5
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
36.2
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
36.1
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
35.9
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
35.8
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
35.7
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
35.5
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
35.3
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
34.7
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
34.7
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
34.7
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
34.3
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
34.3
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
34.2
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
34.1
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
34.0
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
33.8
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
33.7
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
33.7
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
33.5
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
33.5
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
33.4
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
33.4
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
33.2
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
33.1
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
32.9
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
32.8
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
32.8
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
32.6
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
32.4
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
32.3
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
32.3
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
32.2
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
32.0
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
31.9
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
31.8
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
31.8
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
31.6
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
31.6
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
31.4
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
31.3
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
31.2
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
31.0
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
31.0
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
30.9
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
30.8
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
30.7
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
30.7
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
30.6
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
30.6
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
30.5
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
30.4
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
30.1
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
29.7
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
29.7
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
29.6
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
29.6
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
29.5
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
29.5
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
29.4
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
29.3
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
29.1
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
29.0
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
29.0
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
29.0
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
29.0
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
28.8
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
28.7
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
28.6
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
28.5
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
28.4
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
28.4
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
28.4
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
28.2
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
28.2
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
28.1
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
28.1
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
28.0
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
27.9
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
27.9
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
27.8
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
27.7
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
27.7
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
27.7
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
27.7
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
27.5
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
27.5
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
27.5
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
27.4
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
27.3
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
27.3
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
27.3
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
27.2
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
27.2
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
27.1
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
27.1
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
27.0
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
27.0
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
26.9
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
26.9
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
26.9
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
26.8
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
26.8
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
26.8
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
26.6
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
26.6
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
26.5
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
26.3
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
26.3
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
26.3
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
26.2
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
26.2
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
26.2
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
26.1
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
25.9
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
25.8
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
25.7
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
25.6
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
25.5
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
25.4
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
25.3
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
25.3
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
25.3
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
25.3
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
25.2
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
25.1
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
25.0
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
24.9
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
24.9
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
24.9
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
24.7
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
24.7
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
24.6
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
24.6
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
24.6
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
24.5
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
24.3
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
24.2
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
24.1
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
24.1
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
24.0
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
23.9
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
23.8
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
23.8
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
23.8
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
23.7
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
23.7
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
23.5
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
23.5
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
23.5
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
23.5
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
23.4
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
23.4
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
23.4
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
23.3
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
23.3
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
23.2
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
23.1
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
23.0
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
23.0
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
23.0
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
22.9
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
22.9
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
22.8
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
22.7
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
22.6
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
22.5
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
22.5
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
22.5
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
22.4
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
22.4
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
22.4
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
22.4
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
22.3
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
22.2
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
21.9
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
21.9
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
21.9
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
21.9
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
21.8
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
21.8
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
21.6
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
21.6
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
21.6
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
21.6
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
21.5
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
21.5
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
21.5
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
21.3
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
21.3
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
21.3
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
21.1
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
21.1
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
21.0
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
21.0
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
21.0
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
21.0
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
21.0
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
20.9
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
20.9
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
20.9
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
20.7
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
20.7
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
20.6
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
20.6
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
20.6
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
20.5
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
20.4
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
20.4
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
20.4
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
20.4
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
20.4
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
20.4
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
20.3
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
20.3
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
20.2
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
20.2
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
20.2
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
20.1
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
20.1
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
20.1
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
20.1
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
20.0
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
19.9
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
19.9
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
19.8
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
19.8
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
19.8
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
19.7
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
19.6
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
19.6
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
19.6
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
19.6
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
19.5
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
19.5
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
19.4
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
19.4
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
19.4
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
19.3
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
19.3
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
19.3
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
19.2
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
19.2
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
19.0
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
19.0
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
18.9
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
18.9
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
18.8
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
18.8
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
18.7
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
18.6
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
18.4
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
18.3
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
18.2
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
18.1
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
18.1
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
18.0
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
18.0
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
18.0
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
17.9
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
17.9
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
17.8
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
17.8
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
17.7
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
17.6
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
17.6
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
17.6
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
17.6
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
17.5
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
17.5
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
17.5
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
17.5
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
17.5
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
17.5
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
17.5
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
17.4
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
17.4
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
17.4
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
17.3
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
17.3
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
17.3
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
17.2
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
17.2
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
16.9
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
16.9
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
16.9
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
16.9
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
16.8
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
16.8
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
16.8
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
16.6
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
16.6
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
16.6
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
16.5
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
16.5
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
16.4
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
16.4
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
16.4
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
16.3
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
16.3
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
16.2
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
16.2
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
16.2
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
16.1
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
16.1
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
16.0
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
16.0
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
16.0
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
16.0
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
16.0
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
16.0
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
15.9
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
15.9
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
15.9
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
15.8
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
15.7
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
15.7
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
15.7
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
15.6
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
15.6
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
15.6
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
15.5
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
15.5
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
15.5
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
15.4
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
15.3
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
15.3
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
15.3
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
15.3
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
15.3
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
15.2
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
15.0
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
15.0
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
14.9
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
14.9
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
14.8
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
14.8
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
14.8
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
14.8
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
14.8
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
14.8
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
14.7
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
14.7
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
14.7
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
14.7
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
14.7
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
14.7
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
14.7
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
14.6
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
14.6
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
14.5
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
14.5
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
14.5
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
14.4
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
14.4
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
14.4
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
14.3
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
14.3
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
14.2
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
14.2
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
14.2
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
14.1
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
14.1
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
13.9
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
13.8
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
13.8
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
13.7
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
13.7
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
13.6
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
13.6
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
13.6
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
13.6
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
13.5
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
13.3
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
13.3
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
13.3
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
13.3
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
13.2
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
13.1
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
13.1
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
13.1
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
13.1
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
13.0
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
12.9
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
12.9
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
12.8
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
12.8
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
12.8
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
12.7
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
12.6
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
12.6
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
12.6
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
12.6
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
12.4
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
12.4
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
12.3
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
12.3
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
12.2
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
12.2
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
12.2
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
12.2
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
12.1
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
12.0
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
11.9
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
11.9
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
11.9
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
11.9
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
11.8
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
11.8
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
11.7
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
11.6
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
11.6
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
11.5
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
11.5
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
11.1
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
11.1
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
11.1
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
11.0
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
11.0
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
11.0
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
10.9
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
10.9
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
10.8
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
10.7
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
10.7
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
10.7
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
10.7
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
10.7
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
10.7
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
10.6
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
10.4
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
10.3
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
10.3
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
10.3
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
10.2
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
10.2
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
10.1
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
10.1
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
10.1
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
10.0
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
9.9
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
9.9
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
9.9
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
9.8
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
9.8
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
9.8
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
9.6
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
9.5
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
9.3
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
9.3
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
9.3
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
9.2
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
9.1
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
9.0
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
8.9
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
8.9
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
8.8
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
8.7
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
8.6
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
8.4
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
8.3
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
8.2
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
8.2
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
8.0
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
8.0
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
8.0
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
7.9
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
7.9
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
7.5
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
7.3
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
7.3
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
7.0
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
7.0
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
6.9
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
6.8
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
6.5
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
6.3
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
6.1
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
6.1
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
6.0
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
6.0
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
6.0
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
5.9
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
5.9
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
5.8
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
5.4
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
4.8
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
4.6
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
4.6
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
4.4
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
4.2
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
2.5
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SNX4 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
28.2
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
76.2
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
62.9
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
57.1
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
50.7
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
49.7
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
49.3
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
44.2
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
42.6
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
41.7
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
41.5
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
41.0
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
40.1
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
40.1
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
39.6
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
39.3
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
39.2
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
38.5
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
38.2
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
37.1
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
36.0
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
35.9
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
35.6
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
35.3
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
35.1
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
34.8
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
34.8
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
34.7
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
34.4
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
34.4
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
34.2
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
33.4
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
33.3
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
33.0
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
32.7
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
32.5
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
32.3
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
32.0
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
31.9
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
31.4
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
30.7
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
29.9
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
29.1
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
29.0
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
29.0
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
29.0
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
28.7
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
27.6
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
27.3
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
26.8
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
26.4
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
26.2
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
26.1
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
25.8
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
25.6
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
25.4
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
25.4
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
25.3
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
25.3
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
25.2
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
24.5
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
24.2
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
23.6
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
22.8
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
22.5
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
22.5
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
22.3
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
22.3
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
21.5
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
21.4
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
21.3
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
21.0
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
21.0
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
20.8
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
20.7
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
19.9
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
19.6
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
19.6
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
19.1
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
19.1
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
18.3
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
18.1
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
18.0
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
17.7
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
17.2
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
16.7
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
16.3
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
16.2
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
15.8
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
15.7
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
15.6
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
15.2
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
15.0
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
13.6
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
12.4
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
11.9
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
11.0
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
10.3
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
9.6
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
8.8
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SNX4 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
20.5
Number of samples
282
Samples
Sample
Description
TPM
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
82.2
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
77.4
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
59.4
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
55.9
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
53.6
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
51.4
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
50.9
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
49.5
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
46.1
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
44.2
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
43.9
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
42.9
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
42.5
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
42.5
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
41.4
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
41.0
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
40.5
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
39.3
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
37.8
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
37.3
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
36.8
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
36.6
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
36.3
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
36.2
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
36.1
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
35.6
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
35.0
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
34.6
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
34.2
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
34.2
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
33.2
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
33.2
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
33.2
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
32.9
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
32.8
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
32.7
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
32.6
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
32.5
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
32.0
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
31.9
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
31.7
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
31.7
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
31.6
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
31.3
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
31.2
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
31.1
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
31.1
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
30.7
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
30.1
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
30.1
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
30.0
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
30.0
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
29.6
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
29.3
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
29.1
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
29.0
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
29.0
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
28.6
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
28.5
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
28.5
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
28.5
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
27.8
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
27.5
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
27.4
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
27.0
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
27.0
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
27.0
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
26.9
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
26.9
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
26.7
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
26.6
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
26.5
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
26.4
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
26.3
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
25.8
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
25.8
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
25.7
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
25.3
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
25.1
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
25.1
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
24.7
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
24.5
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
24.4
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
24.4
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
24.4
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
24.2
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
24.1
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
24.1
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
24.0
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
23.8
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
23.7
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
23.7
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
23.5
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
23.4
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
23.4
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
23.3
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
23.3
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
23.3
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
23.2
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
23.1
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
23.1
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
22.5
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
22.5
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
22.5
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
22.1
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
21.6
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
21.6
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
21.5
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
21.4
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
21.3
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
21.3
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
21.2
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
21.1
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
21.0
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
21.0
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
21.0
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
21.0
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
20.9
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
20.8
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
20.7
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
20.7
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
20.6
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
20.5
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
20.4
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
20.2
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
20.2
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
20.1
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
20.1
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
20.0
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
19.9
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
19.7
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
19.6
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
19.5
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
19.5
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
19.4
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
19.3
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
19.2
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
19.0
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
18.8
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
18.7
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
18.7
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
18.6
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
18.5
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
18.5
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
18.5
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
18.3
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
18.3
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
18.1
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
18.0
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
17.9
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
17.4
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
17.3
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
17.3
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
17.3
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
17.2
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
17.2
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
17.2
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
17.2
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
17.0
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
16.9
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
16.9
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
16.8
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
16.7
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
16.6
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
16.6
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
16.5
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
16.4
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
16.3
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
16.2
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
16.1
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
16.1
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
15.9
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
15.8
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
15.6
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
15.4
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
15.4
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
15.3
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
15.3
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
15.2
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
15.1
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
15.0
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
15.0
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
15.0
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
14.9
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
14.6
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
14.6
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
14.6
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
14.5
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
14.4
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
14.4
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
14.4
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
14.3
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
14.3
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
14.2
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
14.1
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
14.1
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
14.0
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
14.0
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
13.9
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
13.9
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
13.8
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
13.7
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
13.5
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
13.5
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
13.3
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
13.2
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
13.1
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
13.1
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
13.0
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
12.9
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
12.9
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
12.8
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
12.8
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
12.7
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
12.5
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
12.5
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
11.9
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
11.8
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
11.6
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
11.6
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
11.4
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
11.4
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
11.3
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
11.3
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
11.3
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
11.1
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
10.9
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
10.7
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
10.6
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
10.6
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
10.6
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
10.6
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
10.5
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
10.5
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
10.3
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
10.3
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
10.2
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
10.2
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
10.1
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
10.0
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
10.0
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
9.7
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
9.5
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
9.3
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
8.8
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
8.8
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
8.7
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
8.4
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
8.1
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
8.0
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
8.0
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
7.9
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
7.8
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
7.7
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
7.7
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
7.6
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
7.4
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
7.4
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
7.2
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
7.2
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
6.7
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
6.4
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
6.2
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
6.2
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
6.1
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
5.3
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
5.1
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
4.9
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
4.9
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
4.8
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
4.7
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
4.6
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
4.5
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
4.4
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
4.2
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
4.0
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
4.0
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
3.9
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
3.5
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
2.7
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
0.0
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0024670003
Tumor
0.6
CPT0009060003
Tumor
0.6
CPT0012770003
Normal
0.6
CPT0076350001
Normal
0.5
CPT0078840001
Normal
0.5
CPT0012280003
Tumor
0.5
CPT0013790003
Normal
0.5
CPT0006950001
Normal
0.4
CPT0092740003
Normal
0.4
CPT0012570003
Normal
0.4
CPT0087050003
Normal
0.4
CPT0077140001
Normal
0.4
CPT0001350001
Normal
0.4
CPT0088480003
Tumor
0.4
CPT0012090003
Normal
0.4
CPT0075570001
Normal
0.4
CPT0065450001
Normal
0.4
CPT0092800003
Normal
0.4
CPT0018250001
Normal
0.4
CPT0006730001
Normal
0.4
CPT0079270003
Tumor
0.4
CPT0012370003
Tumor
0.4
CPT0007320003
Tumor
0.4
CPT0088920001
Normal
0.4
CPT0063640001
Normal
0.4
CPT0077500001
Normal
0.4
CPT0089480003
Normal
0.4
CPT0086360003
Tumor
0.4
CPT0082010001
Normal
0.3
CPT0077110003
Tumor
0.3
CPT0066430001
Normal
0.3
CPT0023710001
Normal
0.3
CPT0023360001
Normal
0.3
CPT0001190001
Normal
0.3
CPT0065810003
Tumor
0.3
CPT0088710001
Normal
0.3
CPT0079430001
Normal
0.3
CPT0000790001
Normal
0.3
CPT0025060001
Normal
0.3
CPT0017450001
Normal
0.3
CPT0065820001
Normal
0.3
CPT0020020001
Normal
0.3
CPT0006530001
Normal
0.3
CPT0012900004
Tumor
0.3
CPT0009080003
Normal
0.3
CPT0086370003
Normal
0.3
CPT0001540009
Tumor
0.3
CPT0014350001
Normal
0.2
CPT0010170001
Normal
0.2
CPT0089040001
Normal
0.2
CPT0000890001
Normal
0.2
CPT0015810003
Tumor
0.2
CPT0020130001
Normal
0.2
CPT0081620001
Normal
0.2
CPT0085670003
Tumor
0.2
CPT0026420001
Normal
0.2
CPT0065430003
Tumor
0.2
CPT0079480003
Tumor
0.2
CPT0012290003
Normal
0.2
CPT0024680001
Normal
0.2
CPT0001220008
Tumor
0.2
CPT0092310003
Normal
0.2
CPT0025610001
Normal
0.2
CPT0014450004
Tumor
0.2
CPT0025880003
Tumor
0.2
CPT0001270001
Normal
0.2
CPT0079000001
Normal
0.2
CPT0065750003
Tumor
0.2
CPT0078670001
Normal
0.1
CPT0086820003
Tumor
0.1
CPT0002270011
Tumor
0.1
CPT0026410003
Tumor
0.1
CPT0066520001
Normal
0.1
CPT0077310003
Tumor
0.1
CPT0014130001
Normal
0.1
CPT0088780001
Normal
0.1
CPT0025110003
Tumor
0.1
CPT0079230003
Tumor
0.1
CPT0007470001
Normal
0.1
CPT0069010001
Normal
0.1
CPT0086970003
Normal
0.1
CPT0064400001
Normal
0.1
CPT0079180003
Tumor
0.1
CPT0012920003
Normal
0.1
CPT0088570001
Normal
0.1
CPT0007870001
Normal
0.1
CPT0006630003
Tumor
0.1
CPT0010110003
Tumor
0.1
CPT0000660001
Normal
0.1
CPT0001180009
Tumor
0.1
CPT0001500009
Tumor
0.1
CPT0078940001
Normal
0.1
CPT0000870016
Tumor
0.1
CPT0086890003
Normal
0.1
CPT0086830003
Normal
0.0
CPT0001510001
Normal
0.0
CPT0078800003
Tumor
0.0
CPT0020120003
Tumor
0.0
CPT0012670003
Tumor
0.0
CPT0023350003
Tumor
0.0
CPT0025920001
Normal
0.0
CPT0019160001
Normal
0.0
CPT0086950003
Tumor
0.0
CPT0078930003
Tumor
0.0
CPT0021240003
Tumor
0.0
CPT0078990003
Tumor
0.0
CPT0025170003
Tumor
0.0
CPT0078660003
Tumor
0.0
CPT0088640003
Normal
0.0
CPT0015730003
Tumor
0.0
CPT0014470001
Normal
-0.1
CPT0064370003
Tumor
-0.1
CPT0088690003
Tumor
-0.1
CPT0009020003
Normal
-0.1
CPT0010120001
Normal
-0.1
CPT0071150004
Tumor
-0.1
CPT0086030003
Tumor
-0.1
CPT0063320003
Tumor
-0.1
CPT0001550001
Normal
-0.1
CPT0009000003
Tumor
-0.1
CPT0088500001
Normal
-0.1
CPT0078530001
Normal
-0.1
CPT0084590001
Normal
-0.1
CPT0002370001
Normal
-0.1
CPT0089020003
Tumor
-0.1
CPT0011240003
Tumor
-0.1
CPT0081990003
Tumor
-0.1
CPT0006440003
Tumor
-0.1
CPT0007860003
Tumor
-0.1
CPT0063330001
Normal
-0.1
CPT0078830003
Tumor
-0.1
CPT0019130003
Tumor
-0.1
CPT0075170001
Normal
-0.1
CPT0086870003
Tumor
-0.1
CPT0001260009
Tumor
-0.2
CPT0025290003
Tumor
-0.2
CPT0006900003
Tumor
-0.2
CPT0066480003
Tumor
-0.2
CPT0025350003
Tumor
-0.2
CPT0017410003
Tumor
-0.2
CPT0075560003
Tumor
-0.2
CPT0019990003
Tumor
-0.2
CPT0014160003
Tumor
-0.2
CPT0087040003
Tumor
-0.2
CPT0025050003
Tumor
-0.2
CPT0088900003
Tumor
-0.2
CPT0065870003
Tumor
-0.2
CPT0001230001
Normal
-0.2
CPT0077320001
Normal
-0.2
CPT0069190001
Normal
-0.2
CPT0081600003
Tumor
-0.2
CPT0065930003
Tumor
-0.3
CPT0000640003
Tumor
-0.3
CPT0002350011
Tumor
-0.3
CPT0077490003
Tumor
-0.3
CPT0014370004
Tumor
-0.3
CPT0075720003
Tumor
-0.3
CPT0010160003
Tumor
-0.3
CPT0092290003
Tumor
-0.3
CPT0069160003
Tumor
-0.3
CPT0088970003
Tumor
-0.3
CPT0063630003
Tumor
-0.3
CPT0011410003
Tumor
-0.4
CPT0025580004
Tumor
-0.4
CPT0012080003
Tumor
-0.4
CPT0012550003
Tumor
-0.4
CPT0079410003
Tumor
-0.4
CPT0089460004
Tumor
-0.4
CPT0079510001
Normal
-0.4
CPT0025230003
Tumor
-0.4
CPT0092730003
Tumor
-0.4
CPT0000780007
Tumor
-0.4
CPT0066470004
Tumor
-0.4
CPT0092160003
Tumor
-0.4
CPT0078510003
Tumor
-0.4
CPT0088630003
Tumor
-0.4
CPT0092190003
Normal
-0.4
CPT0081880003
Tumor
-0.4
CPT0088760003
Tumor
-0.5
CPT0079300001
Normal
-0.5
CPT0069000003
Tumor
-0.5
CPT0084560003
Tumor
-0.5
CPT0092790003
Tumor
-0.5
CPT0015910003
Tumor
-0.5
CPT0075130003
Tumor
-0.5
CPT0012640003
Normal
-0.5
CPT0079380003
Tumor
-0.6
CPT0012180003
Tumor
-0.6
CPT0065690003
Tumor
-0.6
CPT0088550004
Tumor
-0.6
CPT0076330003
Tumor
-0.7
CPT0001340003
Tumor
-0.7
CPT0023690003
Tumor
-0.7
CPT0017850003
Tumor
-0.8
Show allShow less
RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
