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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NCBP2 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
34.0
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
78.1
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
73.0
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
62.4
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
59.9
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
59.8
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
59.3
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
58.6
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
53.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
52.4
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
51.2
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
48.9
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
48.7
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
48.5
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
47.9
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
46.1
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
44.4
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
43.9
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
43.3
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
42.9
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
42.3
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
41.5
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
40.2
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
39.7
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
39.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
37.0
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
32.8
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
31.9
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
31.9
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
31.4
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
31.2
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
30.5
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
30.0
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
29.8
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
29.8
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
29.5
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
29.2
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
28.8
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
28.7
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
28.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
27.7
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
27.1
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
26.8
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
26.8
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
26.7
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
26.6
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
23.8
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
22.6
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
22.2
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
22.0
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
21.8
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
20.4
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
19.9
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
19.8
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
19.6
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
18.4
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
16.7
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
15.4
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
14.8
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
14.3
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
14.0
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
13.6
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
13.3
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
13.1
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NCBP2 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
31.9
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
90.3
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
78.9
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
77.7
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
74.4
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
74.1
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
71.3
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
69.7
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
66.1
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
66.0
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
65.1
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
64.0
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
61.0
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
59.9
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
59.8
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
59.3
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
58.0
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
56.1
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
54.2
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
54.0
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
53.3
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
52.7
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
52.2
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
51.9
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
51.5
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
50.5
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
50.3
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
49.0
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
48.7
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
48.4
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
48.3
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
48.1
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
47.8
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
46.8
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
46.6
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
46.4
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
46.4
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
45.6
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
45.6
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
45.6
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
45.6
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
45.5
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
45.4
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
45.4
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
45.3
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
45.3
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
45.3
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
45.2
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
45.2
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
45.0
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
44.9
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
44.9
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
44.6
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
44.5
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
44.2
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
44.1
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
44.1
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
43.8
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
43.7
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
43.7
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
43.5
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
43.5
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
43.2
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
43.0
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
42.8
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
42.8
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
42.5
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
42.4
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
42.3
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
42.2
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
42.2
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
42.1
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
41.9
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
41.7
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
41.7
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
41.7
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
41.6
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
41.5
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
41.4
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
41.3
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
41.3
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
41.2
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
41.1
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
40.9
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
40.8
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
40.3
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
40.2
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
40.0
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
40.0
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
40.0
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
39.9
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
39.9
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
39.9
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
39.7
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
39.6
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
39.5
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
39.5
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
39.5
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
39.5
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
39.5
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
39.5
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
39.3
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
39.2
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
39.2
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
39.2
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
39.0
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
39.0
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
39.0
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
38.9
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
38.8
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
38.8
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
38.8
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
38.7
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
38.7
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
38.7
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
38.7
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
38.6
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
38.6
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
38.6
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
38.5
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
38.3
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
38.2
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
38.1
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
38.1
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
38.0
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
38.0
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
38.0
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
38.0
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
37.9
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
37.8
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
37.8
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
37.7
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
37.7
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
37.7
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
37.6
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
37.6
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
37.5
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
37.4
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
37.4
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
37.4
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
37.3
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
37.3
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
37.2
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
37.2
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
37.1
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
37.1
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
37.1
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
37.1
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
37.0
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
37.0
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
36.9
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
36.9
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
36.8
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
36.7
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
36.7
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
36.7
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
36.7
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
36.7
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
36.6
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
36.6
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
36.5
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
36.5
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
36.5
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
36.4
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
36.4
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
36.3
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
36.2
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
36.2
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
35.9
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
35.9
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
35.7
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
35.7
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
35.6
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
35.6
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
35.6
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
35.4
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
35.4
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
35.4
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
35.3
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
35.3
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
35.2
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
35.2
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
35.2
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
35.2
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
35.2
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
35.2
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
35.0
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
34.9
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
34.8
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
34.8
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
34.8
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
34.7
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
34.7
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
34.7
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
34.6
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
34.4
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
34.4
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
34.3
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
34.2
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
34.2
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
34.2
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
34.1
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
34.1
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
34.0
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
34.0
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
34.0
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
33.9
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
33.9
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
33.8
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
33.8
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
33.7
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
33.7
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
33.6
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
33.6
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
33.4
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
33.4
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
33.4
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
33.4
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
33.4
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
33.3
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
33.3
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
33.2
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
33.2
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
33.1
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
33.0
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
33.0
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
32.8
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
32.6
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
32.5
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
32.5
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
32.4
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
32.3
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
32.3
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
32.3
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
32.3
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
32.2
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
32.1
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
32.1
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
32.1
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
32.1
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
32.1
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
32.1
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
32.1
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
32.1
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
32.0
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
31.8
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
31.8
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
31.8
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
31.7
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
31.7
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
31.7
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
31.6
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
31.6
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
31.5
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
31.4
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
31.4
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
31.4
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
31.2
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
31.1
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
31.0
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
31.0
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
30.9
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
30.9
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
30.9
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
30.7
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
30.6
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
30.6
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
30.6
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
30.6
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
30.5
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
30.5
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
30.5
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
30.5
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
30.5
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
30.4
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
30.4
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
30.4
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
30.4
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
30.3
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
30.3
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
30.3
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
30.2
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
30.1
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
30.1
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
30.1
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
30.0
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
30.0
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
29.9
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
29.9
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
29.9
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
29.8
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
29.8
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
29.8
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
29.8
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
29.8
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
29.7
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
29.6
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
29.5
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
29.5
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
29.5
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
29.5
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
29.5
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
29.4
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
29.3
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
29.3
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
29.3
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
29.3
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
29.3
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
29.2
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
29.2
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
29.1
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
29.1
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
29.1
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
29.1
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
29.0
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
28.9
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
28.8
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
28.7
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
28.7
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
28.6
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
28.6
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
28.5
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
28.5
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
28.5
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
28.4
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
28.4
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
28.4
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
28.4
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
28.3
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
28.3
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
28.3
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
28.2
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
28.2
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
28.1
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
28.1
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
28.1
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
28.1
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
28.1
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
27.9
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
27.8
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
27.7
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
27.7
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
27.7
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
27.7
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
27.6
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
27.5
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
27.5
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
27.5
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
27.5
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
27.4
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
27.4
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
27.4
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
27.3
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
27.2
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
27.2
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
27.1
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
27.0
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
27.0
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
26.9
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
26.8
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
26.8
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
26.8
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
26.6
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
26.4
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
26.4
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
26.4
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
26.2
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
26.2
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
26.1
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
26.0
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
25.9
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
25.9
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
25.8
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
25.8
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
25.8
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
25.8
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
25.7
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
25.7
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
25.7
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
25.7
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
25.5
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
25.4
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
25.4
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
25.2
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
25.0
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
25.0
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
24.8
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
24.8
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
24.7
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
24.6
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
24.5
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
24.5
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
24.5
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
24.3
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
24.2
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
24.1
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
24.1
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
24.1
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
24.0
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
24.0
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
23.9
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
23.9
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
23.9
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
23.9
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
23.9
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
23.6
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
23.6
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
23.6
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
23.5
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
23.5
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
23.5
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
23.4
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
23.4
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
23.3
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
23.2
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
23.2
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
23.2
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
23.2
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
22.8
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
22.8
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
22.7
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
22.6
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
22.6
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
22.5
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
22.5
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
22.4
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
22.4
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
22.3
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
22.3
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
22.3
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
22.1
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
22.1
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
22.1
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
22.1
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
22.0
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
21.9
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
21.9
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
21.8
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
21.7
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
21.6
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
21.5
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
21.5
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
21.5
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
21.5
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
21.4
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
21.4
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
21.3
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
21.3
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
21.3
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
21.1
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
20.9
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
20.9
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
20.6
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
20.6
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
20.6
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
20.6
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
20.5
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
20.5
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
20.4
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
20.1
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
20.0
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
19.9
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
19.9
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
19.8
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
19.7
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
19.7
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
19.6
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
19.6
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
19.5
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
19.4
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
19.2
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
19.0
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
18.6
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
18.5
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
18.5
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
18.5
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
18.4
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
18.0
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
18.0
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
17.9
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
17.7
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
17.7
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
17.5
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
17.5
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
17.4
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
17.3
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
17.0
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
16.9
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
16.9
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
16.6
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
16.4
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
16.3
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
16.3
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
16.1
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
16.0
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
16.0
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
16.0
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
15.9
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
15.6
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
15.6
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
15.5
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
15.3
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
15.2
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
15.2
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
15.0
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
15.0
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
14.8
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
14.8
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
13.8
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
13.4
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
13.4
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
13.3
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
12.5
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
12.5
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
12.3
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
12.2
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
11.2
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
10.2
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
10.0
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
9.8
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
8.7
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NCBP2 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
47.5
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
91.9
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
84.2
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
82.3
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
72.7
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
70.1
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
68.3
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
66.3
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
66.2
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
64.4
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
64.3
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
64.2
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
62.2
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
62.0
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
61.2
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
60.9
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
59.8
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
58.9
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
58.9
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
58.1
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
57.3
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
56.8
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
56.7
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
56.3
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
54.5
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
54.2
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
53.5
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
53.4
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
53.0
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
53.0
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
52.5
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
52.3
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
51.7
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
51.6
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
51.5
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
51.4
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
51.3
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
51.1
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
50.7
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
50.0
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
49.9
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
48.6
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
48.4
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
48.4
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
48.0
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
47.9
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
47.8
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
47.4
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
46.8
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
46.7
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
46.7
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
46.3
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
46.2
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
46.2
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
46.0
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
45.7
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
45.5
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
45.1
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
45.0
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
44.9
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
44.1
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
44.0
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
44.0
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
43.6
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
43.4
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
43.4
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
43.0
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
42.9
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
41.8
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
40.9
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
40.7
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
40.4
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
40.3
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
39.5
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
39.2
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
39.1
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
38.7
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
38.5
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
37.8
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
37.7
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
37.3
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
37.0
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
36.1
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
35.6
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
35.1
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
34.5
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
33.5
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
33.0
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
32.7
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
32.0
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
31.4
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
30.9
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
30.7
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
30.4
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
29.7
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
26.9
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
26.0
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
25.3
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
25.1
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
24.6
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NCBP2 is potential prognostic, high expression is unfavorable in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
41.2
Number of samples
282
Samples
Sample
Description
TPM
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
161.5
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
113.7
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
96.8
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
93.2
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
90.1
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
80.7
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
74.9
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
74.7
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
74.7
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
74.6
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
72.6
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
71.6
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
71.0
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
70.2
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
69.6
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
69.5
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
69.4
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
69.1
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
69.1
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
68.1
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
67.2
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
67.0
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
66.5
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
66.4
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
66.0
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
65.2
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
64.1
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
63.5
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
63.4
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
62.7
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
62.4
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
61.7
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
61.6
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
61.3
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
61.0
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
60.4
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
58.7
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
58.6
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
58.4
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
58.3
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
57.8
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
57.2
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
56.9
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
56.7
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
56.6
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
56.6
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
55.5
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
55.1
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
54.9
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
54.6
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
54.3
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
54.1
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
54.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
53.9
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
53.9
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
53.5
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
53.4
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
53.3
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
52.8
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
52.5
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
52.3
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
52.3
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
52.2
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
52.2
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
52.1
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
51.6
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
51.4
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
51.2
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
51.1
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
50.9
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
50.7
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
50.7
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
50.7
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
50.6
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
50.6
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
50.5
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
50.3
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
49.9
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
49.3
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
49.3
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
49.2
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
48.9
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
48.8
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
48.7
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
48.4
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
48.4
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
48.3
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
48.1
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
48.0
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
47.9
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
47.7
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
47.5
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
47.3
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
47.1
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
46.6
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
46.6
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
46.4
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
46.3
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
46.2
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
46.1
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
45.8
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
45.8
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
45.8
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
45.3
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
45.1
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
44.6
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
44.4
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
44.4
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
44.0
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
43.9
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
43.7
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
43.4
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
43.1
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
43.0
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
42.9
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
42.3
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
42.1
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
42.1
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
41.9
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
41.8
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
41.8
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
41.8
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
41.1
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
40.6
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
40.4
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
40.4
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
40.2
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
39.9
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
39.9
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
39.9
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
39.8
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
39.6
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
39.4
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
39.4
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
39.0
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
38.8
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
38.7
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
38.7
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
38.7
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
38.5
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
38.5
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
38.1
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
38.1
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
37.9
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
37.9
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
37.8
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
37.7
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
37.7
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
37.5
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
37.3
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
37.3
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
37.3
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
37.2
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
37.2
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
37.1
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
37.0
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
36.9
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
36.8
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
36.7
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
36.5
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
36.3
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
36.3
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
35.9
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
35.9
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
35.8
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
35.8
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
35.5
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
35.2
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
35.0
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
34.8
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
34.7
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
34.6
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
34.5
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
34.3
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
34.1
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
34.1
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
34.1
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
34.1
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
34.1
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
34.0
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
34.0
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
33.9
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
33.8
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
33.6
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
33.6
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
33.5
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
32.8
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
32.6
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
32.5
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
32.4
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
32.2
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
32.1
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
31.8
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
31.7
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
31.7
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
31.6
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
31.4
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
31.4
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
30.9
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
30.8
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
30.8
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
30.3
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
30.1
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
30.0
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
30.0
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
29.7
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
29.4
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
29.4
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
29.3
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
29.2
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
29.1
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
28.8
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
28.6
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
28.5
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
28.2
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
28.1
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
28.1
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
27.9
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
27.7
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
27.7
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
27.5
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
27.3
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
27.3
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
26.9
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
26.9
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
26.8
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
26.7
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
26.6
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
26.5
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
26.4
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
26.4
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
26.2
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
26.2
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
26.1
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
26.1
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
25.8
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
25.4
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
25.1
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
24.6
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
24.3
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
24.2
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
24.1
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
23.9
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
23.9
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
23.7
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
23.4
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
22.9
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
22.9
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
22.7
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
22.3
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
22.2
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
22.2
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
22.2
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
22.1
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
22.1
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
21.9
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
21.6
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
21.5
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
21.2
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
21.1
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
20.7
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
20.6
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
20.4
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
20.2
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
19.6
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
19.5
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
19.0
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
18.9
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
18.6
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
17.9
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
17.9
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
17.8
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
17.7
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
15.4
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
15.2
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
14.9
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
13.1
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
12.8
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
12.3
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
11.5
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
2.7
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0088550004
Tumor
0.6
CPT0009060003
Tumor
0.6
CPT0075130003
Tumor
0.6
CPT0079410003
Tumor
0.6
CPT0017410003
Tumor
0.5
CPT0017850003
Tumor
0.5
CPT0001340003
Tumor
0.5
CPT0077320001
Normal
0.5
CPT0077110003
Tumor
0.5
CPT0078990003
Tumor
0.4
CPT0006440003
Tumor
0.4
CPT0084590001
Normal
0.4
CPT0026410003
Tumor
0.4
CPT0014370004
Tumor
0.4
CPT0012640003
Normal
0.4
CPT0075170001
Normal
0.4
CPT0086870003
Tumor
0.4
CPT0079180003
Tumor
0.4
CPT0086950003
Tumor
0.4
CPT0014450004
Tumor
0.4
CPT0079300001
Normal
0.4
CPT0071150004
Tumor
0.4
CPT0001270001
Normal
0.4
CPT0085670003
Tumor
0.3
CPT0092730003
Tumor
0.3
CPT0012180003
Tumor
0.3
CPT0024680001
Normal
0.3
CPT0065870003
Tumor
0.3
CPT0075720003
Tumor
0.3
CPT0025580004
Tumor
0.3
CPT0001260009
Tumor
0.3
CPT0001540009
Tumor
0.3
CPT0078830003
Tumor
0.3
CPT0025350003
Tumor
0.3
CPT0084560003
Tumor
0.3
CPT0081600003
Tumor
0.3
CPT0065430003
Tumor
0.3
CPT0069160003
Tumor
0.3
CPT0092190003
Normal
0.2
CPT0088630003
Tumor
0.2
CPT0077490003
Tumor
0.2
CPT0088900003
Tumor
0.2
CPT0066470004
Tumor
0.2
CPT0088970003
Tumor
0.2
CPT0024670003
Tumor
0.2
CPT0010110003
Tumor
0.2
CPT0011240003
Tumor
0.2
CPT0009020003
Normal
0.2
CPT0001180009
Tumor
0.2
CPT0010120001
Normal
0.2
CPT0012370003
Tumor
0.2
CPT0002350011
Tumor
0.2
CPT0089040001
Normal
0.2
CPT0011410003
Tumor
0.2
CPT0010160003
Tumor
0.2
CPT0007320003
Tumor
0.2
CPT0088690003
Tumor
0.2
CPT0079380003
Tumor
0.2
CPT0000780007
Tumor
0.2
CPT0078660003
Tumor
0.2
CPT0019130003
Tumor
0.2
CPT0079510001
Normal
0.2
CPT0087040003
Tumor
0.2
CPT0012290003
Normal
0.2
CPT0086820003
Tumor
0.2
CPT0086830003
Normal
0.1
CPT0006630003
Tumor
0.1
CPT0001230001
Normal
0.1
CPT0078800003
Tumor
0.1
CPT0015730003
Tumor
0.1
CPT0014130001
Normal
0.1
CPT0025110003
Tumor
0.1
CPT0079430001
Normal
0.1
CPT0079270003
Tumor
0.1
CPT0017450001
Normal
0.1
CPT0081990003
Tumor
0.1
CPT0018250001
Normal
0.1
CPT0089460004
Tumor
0.1
CPT0012550003
Tumor
0.1
CPT0082010001
Normal
0.1
CPT0079000001
Normal
0.1
CPT0063330001
Normal
0.1
CPT0012920003
Normal
0.1
CPT0078530001
Normal
0.1
CPT0075570001
Normal
0.1
CPT0065820001
Normal
0.1
CPT0012570003
Normal
0.1
CPT0000660001
Normal
0.1
CPT0012080003
Tumor
0.1
CPT0092160003
Tumor
0.1
CPT0006530001
Normal
0.1
CPT0078930003
Tumor
0.1
CPT0014470001
Normal
0.1
CPT0001190001
Normal
0.1
CPT0086370003
Normal
0.1
CPT0075560003
Tumor
0.1
CPT0088500001
Normal
0.1
CPT0089020003
Tumor
0.1
CPT0079480003
Tumor
0.0
CPT0063630003
Tumor
0.0
CPT0012670003
Tumor
0.0
CPT0012090003
Normal
0.0
CPT0069190001
Normal
0.0
CPT0025060001
Normal
0.0
CPT0088570001
Normal
0.0
CPT0012900004
Tumor
0.0
CPT0000870016
Tumor
0.0
CPT0023350003
Tumor
0.0
CPT0066520001
Normal
0.0
CPT0001220008
Tumor
0.0
CPT0079230003
Tumor
0.0
CPT0065690003
Tumor
0.0
CPT0019160001
Normal
0.0
CPT0013790003
Normal
0.0
CPT0009000003
Tumor
0.0
CPT0092740003
Normal
0.0
CPT0088640003
Normal
0.0
CPT0063640001
Normal
0.0
CPT0025920001
Normal
0.0
CPT0001350001
Normal
0.0
CPT0001510001
Normal
0.0
CPT0015910003
Tumor
0.0
CPT0023360001
Normal
0.0
CPT0088480003
Tumor
0.0
CPT0012770003
Normal
0.0
CPT0086890003
Normal
0.0
CPT0076330003
Tumor
0.0
CPT0001550001
Normal
0.0
CPT0007870001
Normal
0.0
CPT0081620001
Normal
0.0
CPT0014350001
Normal
0.0
CPT0069010001
Normal
0.0
CPT0025050003
Tumor
0.0
CPT0069000003
Tumor
0.0
CPT0020130001
Normal
0.0
CPT0065930003
Tumor
0.0
CPT0002370001
Normal
0.0
CPT0088710001
Normal
0.0
CPT0007470001
Normal
0.0
CPT0088780001
Normal
0.0
CPT0088760003
Tumor
0.0
CPT0078670001
Normal
0.0
CPT0009080003
Normal
-0.1
CPT0086360003
Tumor
-0.1
CPT0088920001
Normal
-0.1
CPT0020120003
Tumor
-0.1
CPT0076350001
Normal
-0.1
CPT0025880003
Tumor
-0.1
CPT0065810003
Tumor
-0.1
CPT0006730001
Normal
-0.1
CPT0064400001
Normal
-0.1
CPT0025170003
Tumor
-0.1
CPT0092800003
Normal
-0.1
CPT0092790003
Tumor
-0.1
CPT0023690003
Tumor
-0.1
CPT0092310003
Normal
-0.1
CPT0010170001
Normal
-0.1
CPT0012280003
Tumor
-0.1
CPT0078940001
Normal
-0.1
CPT0006950001
Normal
-0.1
CPT0000790001
Normal
-0.1
CPT0025290003
Tumor
-0.1
CPT0025610001
Normal
-0.1
CPT0087050003
Normal
-0.1
CPT0066430001
Normal
-0.1
CPT0077500001
Normal
-0.1
CPT0002270011
Tumor
-0.1
CPT0023710001
Normal
-0.1
CPT0089480003
Normal
-0.1
CPT0078840001
Normal
-0.1
CPT0020020001
Normal
-0.1
CPT0014160003
Tumor
-0.2
CPT0065450001
Normal
-0.2
CPT0086970003
Normal
-0.2
CPT0015810003
Tumor
-0.2
CPT0006900003
Tumor
-0.2
CPT0000890001
Normal
-0.2
CPT0019990003
Tumor
-0.2
CPT0063320003
Tumor
-0.2
CPT0066480003
Tumor
-0.2
CPT0086030003
Tumor
-0.2
CPT0000640003
Tumor
-0.3
CPT0077140001
Normal
-0.3
CPT0007860003
Tumor
-0.3
CPT0092290003
Tumor
-0.3
CPT0025230003
Tumor
-0.3
CPT0064370003
Tumor
-0.3
CPT0021240003
Tumor
-0.3
CPT0026420001
Normal
-0.3
CPT0065750003
Tumor
-0.4
CPT0078510003
Tumor
-0.4
CPT0077310003
Tumor
-0.5
CPT0001500009
Tumor
-0.5
CPT0081880003
Tumor
-0.6
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
