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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PCCB is potential prognostic, high expression is unfavorable in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
72.8
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
195.5
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
180.2
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
172.1
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
167.2
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
164.2
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
148.3
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
141.6
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
131.4
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
106.3
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
103.3
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
96.3
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
95.9
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
94.2
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
92.0
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
91.1
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
90.6
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
90.2
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
87.3
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
85.8
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
83.7
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
80.8
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
79.4
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
75.5
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
75.5
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
74.3
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
73.9
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
70.4
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
67.4
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
67.4
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
66.8
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
66.2
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
65.9
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
65.5
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
63.9
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
61.6
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
61.2
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
60.3
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
60.1
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
58.5
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
57.4
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
56.5
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
53.4
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
52.3
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
49.5
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
48.7
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
48.1
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
45.9
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
45.9
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
45.3
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
43.6
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
38.1
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
37.2
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
36.7
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
36.2
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
33.9
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
31.9
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
31.8
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
31.7
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
29.3
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
25.2
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
24.7
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
23.1
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
13.5
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PCCB is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
20.5
Number of samples
521
Samples
Sample
Description
TPM
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
158.6
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
125.2
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
120.8
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
111.0
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
110.2
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
86.6
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
80.1
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
79.8
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
76.7
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
74.7
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
69.4
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
66.9
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
59.3
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
56.4
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
53.6
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
52.6
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
52.0
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
51.6
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
51.1
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
51.0
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
51.0
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
50.5
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
47.4
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
46.6
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
46.1
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
45.2
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
44.9
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
44.6
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
43.9
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
43.6
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
42.3
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
42.3
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
42.1
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
42.1
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
40.7
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
39.3
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
38.6
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
38.1
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
37.7
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
37.5
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
37.1
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
37.0
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
35.9
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
35.0
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
34.7
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
34.3
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
33.9
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
33.7
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
33.5
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
33.5
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
32.9
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
32.9
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
32.8
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
32.5
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
32.3
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
32.2
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
32.2
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
31.9
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
31.8
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
31.7
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
31.6
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
31.2
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
31.1
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
30.9
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
30.9
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
30.9
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
30.3
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
29.7
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
29.6
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
29.5
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
29.3
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
29.2
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
29.1
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
29.0
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
28.9
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
28.9
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
28.8
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
28.5
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
28.5
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
28.1
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
28.1
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
27.9
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
27.8
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
27.7
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
27.5
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
27.4
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
27.2
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
27.1
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
27.1
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
27.0
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
26.8
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
26.8
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
26.8
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
26.6
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
26.5
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
26.4
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
26.4
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
26.1
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
26.1
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
26.0
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
25.9
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
25.9
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
25.8
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
25.8
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
25.7
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
25.6
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
25.5
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
25.5
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
25.4
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
25.2
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
25.1
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
25.1
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
25.1
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
25.0
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
25.0
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
25.0
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
24.9
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
24.9
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
24.7
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
24.5
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
24.3
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
24.2
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
24.1
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
24.1
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
23.6
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
23.5
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
23.4
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
23.4
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
23.1
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
23.0
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
22.9
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
22.8
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
22.8
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
22.7
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
22.7
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
22.5
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
22.5
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
22.5
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
22.5
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
22.4
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
22.4
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
22.3
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
22.3
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
22.1
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
22.1
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
22.1
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
22.0
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
21.9
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
21.8
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
21.7
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
21.6
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
21.5
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
21.4
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
21.4
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
21.4
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
21.4
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
21.3
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
21.2
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
21.2
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
21.2
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
21.0
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
20.9
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
20.9
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
20.7
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
20.6
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
20.6
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
20.6
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
20.5
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
20.5
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
20.3
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
20.2
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
20.1
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
20.1
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
20.0
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
19.9
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
19.9
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
19.8
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
19.8
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
19.8
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
19.7
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
19.7
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
19.7
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
19.6
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
19.6
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
19.6
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
19.5
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
19.5
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
19.4
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
19.4
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
19.4
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
19.3
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
19.2
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
19.2
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
19.0
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
19.0
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
18.9
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
18.8
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
18.8
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
18.8
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
18.7
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
18.6
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
18.6
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
18.6
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
18.6
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
18.5
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
18.5
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
18.5
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
18.5
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
18.4
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
18.4
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
18.4
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
18.3
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
18.3
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
18.2
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
18.2
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
18.1
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
18.1
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
18.0
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
18.0
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
18.0
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
18.0
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
17.8
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
17.8
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
17.8
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
17.7
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
17.7
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
17.6
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
17.6
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
17.6
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
17.6
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
17.5
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
17.4
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
17.4
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
17.3
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
17.3
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
17.2
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
17.2
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
17.2
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
17.2
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
17.2
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
17.2
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
17.1
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
17.0
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
17.0
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
17.0
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
17.0
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
17.0
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
16.9
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
16.9
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
16.9
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
16.8
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
16.8
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
16.8
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
16.7
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
16.7
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
16.7
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
16.7
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
16.7
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
16.6
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
16.6
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
16.5
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
16.5
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
16.5
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
16.5
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
16.4
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
16.4
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
16.4
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
16.3
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
16.3
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
16.2
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
16.2
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
16.2
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
16.2
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
16.1
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
16.0
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
15.9
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
15.9
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
15.9
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
15.9
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
15.8
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
15.8
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
15.7
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
15.7
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
15.7
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
15.7
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
15.6
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
15.6
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
15.6
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
15.5
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
15.5
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
15.5
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
15.4
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
15.4
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
15.3
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
15.3
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
15.3
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
15.2
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
15.1
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
15.1
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
15.1
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
15.1
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
15.1
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
15.0
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
15.0
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
15.0
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
14.9
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
14.9
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
14.9
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
14.9
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
14.9
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
14.8
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
14.8
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
14.8
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
14.8
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
14.8
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
14.7
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
14.7
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
14.7
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
14.7
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
14.6
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
14.6
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
14.6
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
14.5
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
14.5
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
14.5
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
14.5
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
14.4
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
14.4
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
14.4
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
14.4
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
14.4
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
14.4
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
14.4
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
14.2
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
14.2
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
14.1
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
14.1
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
14.0
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
14.0
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
14.0
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
14.0
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
13.9
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
13.9
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
13.9
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
13.9
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
13.8
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
13.7
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
13.7
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
13.7
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
13.6
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
13.6
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
13.6
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
13.6
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
13.5
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
13.5
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
13.5
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
13.5
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
13.5
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
13.5
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
13.4
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
13.4
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
13.4
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
13.4
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
13.4
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
13.3
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
13.3
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
13.2
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
13.2
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
13.2
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
13.2
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
13.2
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
13.2
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
13.1
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
13.1
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
13.1
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
13.1
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
13.0
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
13.0
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
13.0
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
13.0
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
13.0
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
13.0
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
12.9
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
12.9
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
12.8
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
12.8
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
12.7
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
12.7
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
12.6
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
12.6
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
12.6
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
12.6
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
12.5
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
12.5
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
12.5
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
12.5
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
12.4
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
12.4
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
12.3
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
12.3
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
12.3
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
12.2
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
12.2
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
12.2
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
12.2
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
12.0
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
12.0
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
12.0
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
12.0
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
12.0
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
11.9
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
11.8
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
11.8
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
11.8
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
11.8
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
11.8
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
11.7
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
11.6
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
11.6
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
11.6
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
11.6
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
11.6
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
11.5
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
11.5
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
11.4
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
11.4
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
11.3
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
11.3
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
11.1
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
11.1
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
11.1
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
11.1
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
11.1
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
11.0
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
11.0
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
11.0
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
11.0
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
10.9
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
10.9
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
10.8
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
10.8
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
10.8
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
10.8
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
10.8
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
10.8
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
10.7
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
10.7
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
10.7
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
10.7
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
10.6
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
10.6
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
10.6
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
10.6
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
10.5
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
10.4
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
10.4
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
10.3
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
10.3
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
10.1
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
10.0
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
10.0
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
10.0
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
9.9
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
9.9
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
9.9
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
9.8
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
9.8
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
9.8
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
9.8
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
9.7
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
9.6
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
9.6
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
9.5
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
9.4
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
9.4
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
9.3
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
9.3
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
9.2
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
9.2
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
9.2
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
9.1
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
9.1
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
9.1
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
9.1
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
9.1
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
8.9
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
8.9
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
8.9
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
8.7
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
8.7
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
8.6
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
8.6
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
8.6
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
8.5
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
8.5
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
8.2
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
8.0
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
8.0
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
8.0
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
8.0
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
8.0
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
7.9
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
7.8
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
7.6
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
7.5
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
7.5
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
7.4
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
7.0
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
7.0
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
7.0
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
6.9
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
6.8
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
6.7
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
6.7
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
6.6
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
6.5
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
6.3
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
6.3
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
5.4
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
3.6
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PCCB is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
21.9
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
117.2
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
47.4
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
45.4
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
39.1
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
37.9
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
37.4
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
35.4
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
35.2
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
34.8
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
34.2
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
33.5
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
32.3
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
31.6
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
30.3
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
30.1
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
29.6
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
29.4
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
29.0
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
28.5
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
28.5
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
27.4
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
27.3
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
26.7
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
26.6
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
26.3
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
26.2
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
26.0
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
25.8
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
25.6
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
25.2
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
25.0
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
24.6
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
24.4
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
24.0
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
23.9
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
23.6
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
23.1
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
22.7
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
21.6
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
21.3
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
20.7
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
20.7
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
20.6
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
20.6
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
20.5
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
20.3
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
20.3
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
19.9
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
19.8
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
19.6
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
19.5
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
19.0
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
18.9
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
18.6
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
18.6
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
18.5
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
18.4
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
18.2
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
18.2
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
17.9
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
17.9
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
17.7
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
16.6
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
16.4
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
16.3
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
16.2
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
16.2
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
16.1
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
15.7
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
15.5
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
15.5
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
14.8
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
14.8
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
14.4
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
13.9
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
13.9
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
13.8
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
13.8
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
13.6
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
13.5
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
13.4
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
13.3
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
13.3
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
12.8
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
12.8
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
12.3
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
12.2
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
12.1
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
12.0
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
11.8
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
11.3
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
11.2
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
11.1
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
10.7
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
10.7
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
10.5
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
10.1
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
10.0
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
10.0
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PCCB is potential prognostic, high expression is favorable in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
52.7
Number of samples
282
Samples
Sample
Description
TPM
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
253.2
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
216.7
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
201.2
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
194.1
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
167.6
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
155.1
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
154.9
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
140.3
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
138.9
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
137.8
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
134.4
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
134.3
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
127.5
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
127.3
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
126.9
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
117.8
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
114.2
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
111.1
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
108.4
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
107.7
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
106.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
105.4
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
103.1
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
102.6
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
102.6
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
100.0
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
99.3
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
98.3
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
98.1
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
98.0
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
97.4
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
96.3
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
96.2
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
95.5
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
92.9
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
92.0
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
91.7
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
91.5
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
88.0
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
87.0
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
85.3
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
85.2
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
84.6
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
84.2
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
83.7
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
82.5
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
80.8
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
80.7
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
80.2
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
79.7
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
79.5
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
78.3
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
78.2
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
78.0
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
77.1
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
76.9
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
75.4
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
74.7
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
74.2
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
72.1
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
71.9
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
71.7
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
71.5
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
71.0
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
70.6
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
69.7
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
69.4
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
68.0
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
67.9
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
67.5
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
67.4
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
65.8
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
65.0
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
65.0
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
64.9
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
63.4
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
63.4
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
61.2
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
61.1
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
60.8
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
60.7
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
60.7
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
60.6
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
60.5
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
60.3
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
60.2
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
60.1
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
59.5
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
59.3
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
58.5
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
58.5
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
58.4
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
56.7
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
56.7
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
56.6
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
56.2
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
56.2
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
55.9
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
55.4
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
55.0
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
54.6
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
54.6
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
54.4
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
54.2
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
54.0
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
53.9
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
53.1
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
52.5
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
52.4
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
50.5
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
50.2
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
49.5
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
49.4
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
49.3
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
49.3
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
49.1
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
49.1
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
48.6
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
48.4
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
47.5
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
47.4
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
47.0
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
46.9
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
45.8
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
45.7
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
45.5
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
45.4
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
45.2
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
44.9
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
44.9
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
44.7
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
44.4
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
44.3
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
44.3
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
43.9
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
43.9
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
43.2
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
43.1
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
42.7
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
42.4
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
41.4
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
41.4
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
41.3
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
41.1
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
41.0
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
40.9
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
40.6
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
40.4
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
39.9
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
39.8
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
39.4
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
39.3
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
39.3
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
39.1
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
39.1
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
39.0
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
38.8
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
38.7
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
38.2
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
38.1
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
38.1
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
38.0
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
37.6
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
37.3
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
37.2
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
37.1
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
36.6
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
36.3
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
35.6
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
35.6
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
35.4
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
35.4
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
35.2
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
35.0
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
34.9
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
34.9
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
34.7
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
34.3
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
34.2
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
34.2
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
33.9
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
33.9
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
33.5
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
33.2
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
33.2
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
32.9
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
32.7
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
32.6
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
32.3
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
32.2
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
32.2
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
31.8
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
31.6
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
31.4
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
31.3
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
31.3
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
31.2
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
31.1
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
31.1
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
30.8
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
30.6
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
30.3
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
30.3
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
30.0
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
29.7
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
29.6
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
29.6
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
29.4
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
29.4
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
29.2
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
29.2
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
29.2
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
29.1
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
28.8
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
28.8
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
28.5
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
28.3
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
27.5
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
27.4
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
27.2
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
27.1
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
27.0
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
26.6
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
26.4
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
26.4
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
26.3
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
26.2
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
26.1
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
26.1
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
26.0
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
26.0
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
25.9
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
25.7
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
25.7
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
25.6
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
25.5
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
25.2
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
25.2
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
25.0
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
25.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
24.6
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
24.1
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
23.8
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
23.3
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
22.9
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
22.8
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
22.7
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
22.7
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
22.7
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
22.6
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
22.2
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
22.0
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
22.0
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
21.9
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
21.6
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
21.2
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
20.5
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
20.4
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
19.8
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
18.7
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
18.0
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
18.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
17.9
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
16.6
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
16.6
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
14.7
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
14.4
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
14.2
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
13.1
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
13.0
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
12.5
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
12.2
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
10.8
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
10.0
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
10.0
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
9.9
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
9.8
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
8.8
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
8.3
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
6.7
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
3.2
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
1.3
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0002270011
Tumor
1.2
CPT0088780001
Normal
1.1
CPT0092800003
Normal
1.1
CPT0065450001
Normal
1.0
CPT0092310003
Normal
1.0
CPT0012770003
Normal
1.0
CPT0025610001
Normal
1.0
CPT0066430001
Normal
0.9
CPT0023710001
Normal
0.9
CPT0081620001
Normal
0.9
CPT0012090003
Normal
0.9
CPT0077140001
Normal
0.9
CPT0025060001
Normal
0.9
CPT0077500001
Normal
0.8
CPT0010170001
Normal
0.8
CPT0012570003
Normal
0.8
CPT0089480003
Normal
0.8
CPT0009080003
Normal
0.8
CPT0069010001
Normal
0.8
CPT0088920001
Normal
0.8
CPT0006950001
Normal
0.8
CPT0026420001
Normal
0.8
CPT0079000001
Normal
0.8
CPT0013790003
Normal
0.8
CPT0078840001
Normal
0.8
CPT0006730001
Normal
0.8
CPT0088710001
Normal
0.7
CPT0023360001
Normal
0.7
CPT0092740003
Normal
0.7
CPT0087050003
Normal
0.7
CPT0012290003
Normal
0.7
CPT0014350001
Normal
0.7
CPT0000790001
Normal
0.7
CPT0020020001
Normal
0.7
CPT0078940001
Normal
0.7
CPT0079430001
Normal
0.7
CPT0076350001
Normal
0.7
CPT0007470001
Normal
0.7
CPT0086890003
Normal
0.7
CPT0088640003
Normal
0.7
CPT0078670001
Normal
0.6
CPT0063640001
Normal
0.6
CPT0000890001
Normal
0.6
CPT0086970003
Normal
0.6
CPT0001350001
Normal
0.6
CPT0088500001
Normal
0.6
CPT0020130001
Normal
0.6
CPT0082010001
Normal
0.6
CPT0007870001
Normal
0.6
CPT0086370003
Normal
0.6
CPT0014130001
Normal
0.5
CPT0079180003
Tumor
0.5
CPT0018250001
Normal
0.5
CPT0064400001
Normal
0.5
CPT0089040001
Normal
0.5
CPT0017450001
Normal
0.5
CPT0019160001
Normal
0.4
CPT0075570001
Normal
0.4
CPT0001190001
Normal
0.4
CPT0012920003
Normal
0.4
CPT0088570001
Normal
0.4
CPT0024680001
Normal
0.4
CPT0063330001
Normal
0.4
CPT0006530001
Normal
0.4
CPT0086830003
Normal
0.3
CPT0078530001
Normal
0.3
CPT0066520001
Normal
0.3
CPT0065820001
Normal
0.3
CPT0001510001
Normal
0.3
CPT0025920001
Normal
0.3
CPT0014470001
Normal
0.3
CPT0002370001
Normal
0.3
CPT0001550001
Normal
0.2
CPT0001500009
Tumor
0.2
CPT0000660001
Normal
0.2
CPT0069190001
Normal
0.2
CPT0009020003
Normal
0.1
CPT0001230001
Normal
0.1
CPT0078660003
Tumor
0.1
CPT0010120001
Normal
0.0
CPT0078510003
Tumor
-0.1
CPT0079300001
Normal
-0.1
CPT0012640003
Normal
-0.1
CPT0075170001
Normal
-0.2
CPT0078800003
Tumor
-0.2
CPT0001270001
Normal
-0.4
CPT0012900004
Tumor
-0.4
CPT0079510001
Normal
-0.4
CPT0077310003
Tumor
-0.5
CPT0007860003
Tumor
-0.5
CPT0000780007
Tumor
-0.5
CPT0019990003
Tumor
-0.6
CPT0064370003
Tumor
-0.6
CPT0066470004
Tumor
-0.6
CPT0092290003
Tumor
-0.6
CPT0006440003
Tumor
-0.7
CPT0089460004
Tumor
-0.7
CPT0088970003
Tumor
-0.7
CPT0092190003
Normal
-0.7
CPT0087040003
Tumor
-0.7
CPT0077320001
Normal
-0.7
CPT0076330003
Tumor
-0.7
CPT0066480003
Tumor
-0.7
CPT0084590001
Normal
-0.7
CPT0025170003
Tumor
-0.7
CPT0023690003
Tumor
-0.8
CPT0024670003
Tumor
-0.8
CPT0092790003
Tumor
-0.8
CPT0020120003
Tumor
-0.8
CPT0014370004
Tumor
-0.9
CPT0025880003
Tumor
-0.9
CPT0088480003
Tumor
-0.9
CPT0063320003
Tumor
-0.9
CPT0009000003
Tumor
-0.9
CPT0014160003
Tumor
-0.9
CPT0026410003
Tumor
-0.9
CPT0069160003
Tumor
-0.9
CPT0089020003
Tumor
-0.9
CPT0025050003
Tumor
-1.0
CPT0075720003
Tumor
-1.0
CPT0075560003
Tumor
-1.0
CPT0010160003
Tumor
-1.0
CPT0065810003
Tumor
-1.0
CPT0006630003
Tumor
-1.0
CPT0088630003
Tumor
-1.0
CPT0079480003
Tumor
-1.0
CPT0007320003
Tumor
-1.1
CPT0009060003
Tumor
-1.1
CPT0086870003
Tumor
-1.1
CPT0011240003
Tumor
-1.1
CPT0012550003
Tumor
-1.1
CPT0069000003
Tumor
-1.1
CPT0019130003
Tumor
-1.1
CPT0092160003
Tumor
-1.1
CPT0079410003
Tumor
-1.1
CPT0001260009
Tumor
-1.1
CPT0012280003
Tumor
-1.1
CPT0000870016
Tumor
-1.1
CPT0086950003
Tumor
-1.1
CPT0015910003
Tumor
-1.1
CPT0001220008
Tumor
-1.2
CPT0086360003
Tumor
-1.2
CPT0092730003
Tumor
-1.2
CPT0078930003
Tumor
-1.2
CPT0065430003
Tumor
-1.2
CPT0006900003
Tumor
-1.2
CPT0023350003
Tumor
-1.2
CPT0021240003
Tumor
-1.2
CPT0012370003
Tumor
-1.2
CPT0015730003
Tumor
-1.3
CPT0088900003
Tumor
-1.3
CPT0088690003
Tumor
-1.3
CPT0075130003
Tumor
-1.3
CPT0014450004
Tumor
-1.3
CPT0071150004
Tumor
-1.3
CPT0077490003
Tumor
-1.3
CPT0012670003
Tumor
-1.4
CPT0079270003
Tumor
-1.4
CPT0001540009
Tumor
-1.4
CPT0063630003
Tumor
-1.4
CPT0025580004
Tumor
-1.4
CPT0081600003
Tumor
-1.4
CPT0088760003
Tumor
-1.4
CPT0081990003
Tumor
-1.4
CPT0065750003
Tumor
-1.4
CPT0088550004
Tumor
-1.5
CPT0078830003
Tumor
-1.5
CPT0000640003
Tumor
-1.5
CPT0010110003
Tumor
-1.5
CPT0025110003
Tumor
-1.5
CPT0017410003
Tumor
-1.5
CPT0077110003
Tumor
-1.5
CPT0011410003
Tumor
-1.6
CPT0065870003
Tumor
-1.6
CPT0012080003
Tumor
-1.6
CPT0086030003
Tumor
-1.7
CPT0081880003
Tumor
-1.7
CPT0012180003
Tumor
-1.7
CPT0002350011
Tumor
-1.7
CPT0078990003
Tumor
-1.7
CPT0025230003
Tumor
-1.7
CPT0065930003
Tumor
-1.7
CPT0001340003
Tumor
-1.7
CPT0086820003
Tumor
-1.8
CPT0065690003
Tumor
-1.8
CPT0084560003
Tumor
-1.8
CPT0017850003
Tumor
-1.8
CPT0085670003
Tumor
-1.9
CPT0015810003
Tumor
-1.9
CPT0025350003
Tumor
-2.1
CPT0079230003
Tumor
-2.2
CPT0001180009
Tumor
-2.2
CPT0025290003
Tumor
-2.2
CPT0079380003
Tumor
-2.4
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
