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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HGD is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
22.0
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
115.6
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
65.9
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
61.7
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
61.5
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
57.0
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
55.4
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
54.4
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
46.0
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
45.5
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
45.1
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
43.7
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
42.0
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
41.3
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
33.7
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
32.3
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
31.7
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
31.1
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
29.9
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
29.8
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
27.6
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
23.3
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
20.3
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
20.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
19.1
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
17.9
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
17.4
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
17.0
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
15.9
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
15.6
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
15.1
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
14.9
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
14.8
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
13.6
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
13.4
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
13.3
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
13.3
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
13.2
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
13.1
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
12.5
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
11.1
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
10.8
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
10.7
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
9.6
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
9.5
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
9.1
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
8.1
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
7.5
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
7.3
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
7.3
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
6.9
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
6.8
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
6.7
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
6.6
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
6.4
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
6.3
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
5.6
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
5.2
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
4.4
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
4.2
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
4.2
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
1.9
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
0.2
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
0.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HGD is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
49.7
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
246.2
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
235.5
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
191.1
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
187.1
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
169.0
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
156.3
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
152.7
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
149.1
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
148.6
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
147.3
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
143.9
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
140.7
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
140.0
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
135.3
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
132.1
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
131.3
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
129.3
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
127.6
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
127.0
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
123.3
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
122.2
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
119.9
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
119.6
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
118.6
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
113.5
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
111.9
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
111.9
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
111.6
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
111.3
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
111.0
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
109.9
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
106.9
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
105.3
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
105.3
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
103.7
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
103.6
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
103.6
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
103.2
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
102.8
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
102.2
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
102.1
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
100.7
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
99.8
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
99.8
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
99.4
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
98.5
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
98.4
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
98.1
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
98.1
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
97.7
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
97.1
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
94.5
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
94.4
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
93.1
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
92.9
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
92.6
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
92.0
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
91.4
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
90.9
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
90.6
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
90.2
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
90.1
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
90.0
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
90.0
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
89.4
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
88.6
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
87.2
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
86.6
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
86.4
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
86.0
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
85.8
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
85.4
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
84.6
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
83.8
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
83.3
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
83.2
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
82.0
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
81.6
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
81.5
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
80.4
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
79.3
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
79.0
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
78.7
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
78.6
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
78.1
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
77.9
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
77.7
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
77.6
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
77.4
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
76.8
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
76.5
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
76.0
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
75.9
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
75.7
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
75.4
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
74.9
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
74.2
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
74.1
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
73.9
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
73.5
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
72.9
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
72.7
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
72.7
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
72.6
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
72.3
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
72.1
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
72.1
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
72.0
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
72.0
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
71.7
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
71.7
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
71.6
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
71.6
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
71.4
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
70.5
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
70.5
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
69.9
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
69.8
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
69.7
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
69.1
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
68.9
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
68.6
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
68.5
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
68.2
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
68.0
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
67.5
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
67.2
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
66.6
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
66.2
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
66.2
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
66.0
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
65.8
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
65.6
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
65.5
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
65.0
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
64.7
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
64.7
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
64.6
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
64.5
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
63.7
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
63.6
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
63.5
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
63.3
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
63.2
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
63.2
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
62.6
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
62.4
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
62.4
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
62.4
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
62.1
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
61.7
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
61.6
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
61.4
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
61.4
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
60.4
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
60.3
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
60.2
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
59.9
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
59.7
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
59.5
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
59.4
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
59.3
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
59.2
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
59.1
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
58.9
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
58.6
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
58.5
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
57.9
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
57.7
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
57.6
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
57.5
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
57.1
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
57.1
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
57.0
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
56.7
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
56.5
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
56.5
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
56.2
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
55.9
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
55.8
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
55.8
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
55.6
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
55.2
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
55.0
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
54.7
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
54.5
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
54.4
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
54.4
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
54.2
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
53.8
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
53.8
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
53.7
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
53.6
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
52.6
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
52.3
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
52.1
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
52.1
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
51.6
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
51.5
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
51.4
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
50.8
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
50.7
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
50.5
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
50.4
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
50.4
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
50.4
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
50.2
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
50.1
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
50.0
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
49.8
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
49.7
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
49.6
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
49.5
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
49.4
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
49.2
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
48.9
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
48.1
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
48.0
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
47.9
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
47.7
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
47.5
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
47.5
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
47.5
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
47.2
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
47.0
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
46.7
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
46.4
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
46.4
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
45.5
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
45.3
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
45.1
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
45.1
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
44.9
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
44.8
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
44.3
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
44.0
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
43.8
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
43.7
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
43.4
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
43.4
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
43.2
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
43.1
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
43.0
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
42.7
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
42.6
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
42.6
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
42.5
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
42.5
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
42.4
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
42.3
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
42.1
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
41.8
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
41.8
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
41.7
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
41.6
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
41.5
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
41.5
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
41.4
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
41.3
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
41.1
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
41.1
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
40.9
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
40.9
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
40.8
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
40.8
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
40.8
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
40.6
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
40.5
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
40.2
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
40.0
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
39.8
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
39.7
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
39.7
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
39.6
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
39.6
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
39.6
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
39.6
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
39.6
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
39.6
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
39.4
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
39.0
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
38.8
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
38.6
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
38.4
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
38.4
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
38.4
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
38.3
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
38.3
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
38.3
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
38.1
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
38.0
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
37.9
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
37.4
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
37.2
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
37.1
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
37.0
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
36.8
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
36.7
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
36.7
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
36.6
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
36.6
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
36.6
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
36.5
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
36.3
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
36.3
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
36.1
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
35.9
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
35.5
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
35.4
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
35.3
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
35.2
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
35.2
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
35.1
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
35.0
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
35.0
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
34.9
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
34.7
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
34.5
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
34.4
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
34.3
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
34.2
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
34.2
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
34.2
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
34.0
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
34.0
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
33.9
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
33.8
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
33.7
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
33.5
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
33.4
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
33.3
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
33.3
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
33.1
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
33.1
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
33.0
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
32.8
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
32.8
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
32.7
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
32.7
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
32.7
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
32.5
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
32.3
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
32.1
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
31.9
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
31.6
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
31.5
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
31.5
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
31.3
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
31.1
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
31.1
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
31.0
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
31.0
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
30.8
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
30.6
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
30.6
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
30.3
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
30.2
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
30.2
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
30.0
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
29.6
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
29.5
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
29.5
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
29.4
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
29.3
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
29.2
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
29.2
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
29.0
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
28.9
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
28.9
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
28.6
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
28.0
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
28.0
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
27.9
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
27.8
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
27.7
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
27.4
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
27.4
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
27.0
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
26.8
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
26.8
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
26.6
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
26.2
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
26.2
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
26.1
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
26.0
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
25.9
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
25.8
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
25.8
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
25.7
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
25.5
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
25.4
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
25.4
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
25.2
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
25.1
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
24.9
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
24.9
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
24.3
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
24.1
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
23.9
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
23.9
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
23.8
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
23.7
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
23.7
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
23.4
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
23.4
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
23.3
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
23.2
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
23.2
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
23.1
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
23.1
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
23.0
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
22.8
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
22.7
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
22.7
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
22.5
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
22.4
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
22.1
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
21.9
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
21.9
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
21.8
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
21.7
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
21.6
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
21.6
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
21.6
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
21.5
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
21.4
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
21.3
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
20.9
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
20.6
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
20.5
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
20.5
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
20.4
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
20.2
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
20.2
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
20.1
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
20.0
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
19.8
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
19.7
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
19.5
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
19.5
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
19.4
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
19.4
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
19.3
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
19.3
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
19.0
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
18.3
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
18.3
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
18.1
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
18.1
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
18.0
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
17.9
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
17.8
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
17.7
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
17.5
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
17.5
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
17.5
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
17.3
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
17.0
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
16.7
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
16.6
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
16.6
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
16.5
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
16.4
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
16.3
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
16.1
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
16.0
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
15.8
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
15.8
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
15.7
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
15.5
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
15.1
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
15.0
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
14.9
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
14.7
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
13.8
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
13.7
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
13.4
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
13.1
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
12.8
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
12.7
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
12.7
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
12.6
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
12.4
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
12.3
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
11.8
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
11.5
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
11.2
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
10.7
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
10.7
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
10.7
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
10.5
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
10.1
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
9.9
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
9.4
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
9.1
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
9.0
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
8.9
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
8.5
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
8.4
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
8.4
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
7.8
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
7.2
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
6.6
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
6.5
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
6.5
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
6.3
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
6.3
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
5.7
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
5.4
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
5.0
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
4.9
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
4.8
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
4.3
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
4.0
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
2.5
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
2.2
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
1.6
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
1.5
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
0.3
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
0.1
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HGD is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
56.0
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
223.9
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
139.6
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
138.7
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
116.3
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
113.3
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
112.1
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
110.7
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
107.7
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
100.2
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
99.3
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
95.8
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
95.5
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
87.3
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
86.1
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
82.5
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
79.7
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
78.7
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
76.0
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
75.0
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
73.1
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
71.6
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
69.9
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
69.5
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
69.4
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
68.0
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
67.8
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
67.6
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
65.2
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
65.2
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
63.9
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
63.5
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
63.3
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
62.8
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
62.7
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
62.7
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
62.1
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
59.9
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
58.8
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
58.6
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
58.4
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
58.4
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
58.1
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
57.4
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
57.4
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
56.9
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
56.3
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
55.5
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
55.4
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
55.3
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
55.0
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
54.5
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
52.9
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
51.4
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
51.1
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
48.7
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
48.6
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
47.8
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
46.8
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
45.8
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
45.4
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
45.4
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
44.3
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
44.1
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
43.9
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
42.0
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
40.9
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
40.8
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
40.8
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
40.7
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
38.8
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
37.8
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
37.1
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
35.4
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
34.6
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
33.8
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
33.1
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
33.0
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
31.3
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
29.7
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
29.6
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
28.8
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
26.9
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
26.8
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
26.4
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
25.5
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
25.0
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
22.7
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
22.1
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
21.6
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
21.3
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
21.1
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
20.9
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
20.6
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
20.0
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
17.7
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
17.2
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
15.6
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
13.0
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HGD is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
91.3
Number of samples
282
Samples
Sample
Description
TPM
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
268.0
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
247.1
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
244.6
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
242.8
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
236.9
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
235.7
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
228.0
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
226.6
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
224.6
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
217.4
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
214.7
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
212.1
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
202.4
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
201.6
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
198.3
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
197.8
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
191.9
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
185.2
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
179.8
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
179.4
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
177.5
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
177.2
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
176.7
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
176.0
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
173.9
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
172.6
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
169.7
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
169.1
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
165.3
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
162.3
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
162.2
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
161.9
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
160.9
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
158.4
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
158.1
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
156.5
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
156.4
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
154.6
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
153.9
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
152.5
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
149.7
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
148.1
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
147.9
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
146.7
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
146.1
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
141.5
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
140.6
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
140.2
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
138.1
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
137.4
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
137.4
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
137.1
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
137.1
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
137.0
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
135.8
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
135.5
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
134.8
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
128.7
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
128.7
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
128.3
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
127.7
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
126.3
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
123.8
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
123.5
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
123.0
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
122.7
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
121.5
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
121.5
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
120.9
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
119.8
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
116.9
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
116.1
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
116.1
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
115.9
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
115.4
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
114.7
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
111.9
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
111.5
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
110.7
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
107.8
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
107.7
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
107.2
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
107.0
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
106.9
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
106.9
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
106.7
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
104.4
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
104.1
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
102.5
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
102.1
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
101.2
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
101.1
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
100.1
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
100.0
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
99.9
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
99.8
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
99.7
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
99.7
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
98.5
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
98.5
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
98.5
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
98.4
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
98.0
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
97.9
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
97.7
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
97.6
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
97.3
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
96.6
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
96.6
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
96.4
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
96.4
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
96.2
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
95.9
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
94.9
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
94.9
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
94.6
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
94.2
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
93.1
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
93.0
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
93.0
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
92.9
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
92.5
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
92.1
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
91.0
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
90.7
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
90.5
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
90.1
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
89.4
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
89.0
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
88.4
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
88.3
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
85.7
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
85.3
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
83.8
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
83.2
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
82.9
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
82.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
81.7
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
81.4
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
81.4
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
81.1
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
81.1
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
81.0
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
81.0
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
80.7
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
80.7
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
80.6
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
78.3
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
78.1
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
77.5
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
77.4
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
77.2
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
75.8
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
75.6
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
75.4
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
75.4
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
75.3
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
75.3
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
75.0
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
74.4
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
74.3
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
73.5
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
73.4
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
72.7
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
72.6
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
72.4
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
72.0
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
71.4
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
71.2
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
71.1
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
70.9
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
69.8
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
69.8
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
69.6
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
69.5
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
69.3
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
69.1
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
68.7
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
68.3
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
68.1
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
67.9
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
67.7
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
66.6
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
65.8
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
63.9
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
63.9
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
63.7
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
63.7
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
63.1
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
62.4
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
61.7
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
60.8
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
60.5
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
60.5
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
60.3
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
60.2
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
60.2
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
60.1
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
60.1
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
59.9
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
59.8
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
59.7
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
59.2
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
57.4
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
57.0
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
55.9
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
55.7
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
54.7
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
54.2
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
54.1
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
53.6
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
53.5
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
52.8
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
52.7
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
52.6
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
52.4
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
51.9
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
51.1
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
50.8
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
50.8
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
50.6
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
50.6
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
50.4
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
49.3
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
48.9
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
48.8
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
48.7
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
48.2
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
47.3
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
46.7
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
46.4
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
46.2
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
45.6
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
45.1
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
44.2
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
43.3
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
42.2
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
42.1
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
41.5
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
41.5
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
41.4
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
41.3
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
40.3
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
39.9
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
39.5
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
39.0
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
38.0
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
36.9
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
36.4
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
35.8
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
35.5
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
35.3
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
34.7
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
32.8
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
32.0
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
31.4
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
30.5
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
29.4
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
29.1
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
29.0
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
28.7
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
28.5
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
27.7
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
26.4
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
26.3
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
26.1
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
23.5
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
20.0
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
17.7
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
16.3
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
16.0
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
12.2
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
10.9
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
10.0
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
8.2
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
6.9
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
6.4
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
1.8
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
0.2
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
0.0
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
0.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0079430001
Normal
0.9
CPT0076350001
Normal
0.9
CPT0065450001
Normal
0.9
CPT0088920001
Normal
0.9
CPT0012770003
Normal
0.9
CPT0012280003
Tumor
0.8
CPT0006730001
Normal
0.8
CPT0092800003
Normal
0.8
CPT0009080003
Normal
0.8
CPT0001350001
Normal
0.8
CPT0012090003
Normal
0.8
CPT0077140001
Normal
0.8
CPT0066430001
Normal
0.7
CPT0088480003
Tumor
0.7
CPT0089480003
Normal
0.7
CPT0025610001
Normal
0.7
CPT0078670001
Normal
0.7
CPT0000790001
Normal
0.7
CPT0012570003
Normal
0.7
CPT0023710001
Normal
0.7
CPT0078940001
Normal
0.7
CPT0006950001
Normal
0.7
CPT0026420001
Normal
0.7
CPT0063640001
Normal
0.7
CPT0078530001
Normal
0.6
CPT0075570001
Normal
0.6
CPT0082010001
Normal
0.6
CPT0023360001
Normal
0.6
CPT0014350001
Normal
0.6
CPT0013790003
Normal
0.6
CPT0010170001
Normal
0.6
CPT0092740003
Normal
0.6
CPT0088780001
Normal
0.6
CPT0025060001
Normal
0.6
CPT0081620001
Normal
0.6
CPT0086970003
Normal
0.6
CPT0007870001
Normal
0.5
CPT0007470001
Normal
0.5
CPT0078840001
Normal
0.5
CPT0077500001
Normal
0.5
CPT0020130001
Normal
0.5
CPT0018250001
Normal
0.5
CPT0089040001
Normal
0.5
CPT0079000001
Normal
0.5
CPT0092310003
Normal
0.5
CPT0087050003
Normal
0.5
CPT0069010001
Normal
0.5
CPT0017450001
Normal
0.4
CPT0000890001
Normal
0.4
CPT0086370003
Normal
0.4
CPT0088640003
Normal
0.4
CPT0020020001
Normal
0.4
CPT0012290003
Normal
0.4
CPT0066520001
Normal
0.4
CPT0086890003
Normal
0.3
CPT0088710001
Normal
0.3
CPT0065430003
Tumor
0.3
CPT0064400001
Normal
0.3
CPT0007320003
Tumor
0.3
CPT0014130001
Normal
0.3
CPT0006530001
Normal
0.3
CPT0001540009
Tumor
0.3
CPT0020120003
Tumor
0.3
CPT0001190001
Normal
0.2
CPT0001230001
Normal
0.2
CPT0024680001
Normal
0.2
CPT0063330001
Normal
0.2
CPT0012920003
Normal
0.2
CPT0019160001
Normal
0.2
CPT0001550001
Normal
0.2
CPT0025920001
Normal
0.2
CPT0009020003
Normal
0.2
CPT0088500001
Normal
0.2
CPT0088570001
Normal
0.2
CPT0000660001
Normal
0.2
CPT0065820001
Normal
0.1
CPT0086830003
Normal
0.1
CPT0002370001
Normal
0.1
CPT0015730003
Tumor
0.1
CPT0075170001
Normal
0.0
CPT0009060003
Tumor
0.0
CPT0078800003
Tumor
0.0
CPT0025110003
Tumor
0.0
CPT0014470001
Normal
0.0
CPT0001510001
Normal
0.0
CPT0010110003
Tumor
0.0
CPT0012900004
Tumor
-0.1
CPT0014160003
Tumor
-0.1
CPT0065810003
Tumor
-0.1
CPT0086360003
Tumor
-0.1
CPT0001220008
Tumor
-0.1
CPT0088690003
Tumor
-0.1
CPT0069190001
Normal
-0.1
CPT0019990003
Tumor
-0.1
CPT0012640003
Normal
-0.1
CPT0071150004
Tumor
-0.1
CPT0001500009
Tumor
-0.1
CPT0079480003
Tumor
-0.2
CPT0015810003
Tumor
-0.2
CPT0012670003
Tumor
-0.2
CPT0000870016
Tumor
-0.2
CPT0079270003
Tumor
-0.2
CPT0012550003
Tumor
-0.2
CPT0009000003
Tumor
-0.2
CPT0086820003
Tumor
-0.3
CPT0023350003
Tumor
-0.3
CPT0063320003
Tumor
-0.3
CPT0010120001
Normal
-0.3
CPT0025880003
Tumor
-0.3
CPT0001270001
Normal
-0.3
CPT0024670003
Tumor
-0.3
CPT0012370003
Tumor
-0.3
CPT0077110003
Tumor
-0.4
CPT0065870003
Tumor
-0.4
CPT0065930003
Tumor
-0.4
CPT0075560003
Tumor
-0.5
CPT0078510003
Tumor
-0.5
CPT0078930003
Tumor
-0.5
CPT0026410003
Tumor
-0.5
CPT0078990003
Tumor
-0.5
CPT0081990003
Tumor
-0.5
CPT0066470004
Tumor
-0.5
CPT0021240003
Tumor
-0.5
CPT0011240003
Tumor
-0.5
CPT0076330003
Tumor
-0.5
CPT0077310003
Tumor
-0.5
CPT0078830003
Tumor
-0.6
CPT0025350003
Tumor
-0.6
CPT0079300001
Normal
-0.6
CPT0006440003
Tumor
-0.6
CPT0087040003
Tumor
-0.6
CPT0014370004
Tumor
-0.6
CPT0001340003
Tumor
-0.6
CPT0017410003
Tumor
-0.6
CPT0079510001
Normal
-0.7
CPT0023690003
Tumor
-0.7
CPT0012080003
Tumor
-0.7
CPT0092290003
Tumor
-0.7
CPT0006900003
Tumor
-0.7
CPT0025170003
Tumor
-0.7
CPT0011410003
Tumor
-0.7
CPT0089020003
Tumor
-0.7
CPT0006630003
Tumor
-0.7
CPT0000780007
Tumor
-0.7
CPT0069000003
Tumor
-0.7
CPT0001260009
Tumor
-0.7
CPT0079230003
Tumor
-0.7
CPT0025580004
Tumor
-0.7
CPT0085670003
Tumor
-0.7
CPT0088970003
Tumor
-0.8
CPT0086030003
Tumor
-0.8
CPT0075720003
Tumor
-0.8
CPT0025050003
Tumor
-0.8
CPT0066480003
Tumor
-0.8
CPT0065750003
Tumor
-0.8
CPT0007860003
Tumor
-0.8
CPT0084590001
Normal
-0.8
CPT0081880003
Tumor
-0.8
CPT0077490003
Tumor
-0.9
CPT0075130003
Tumor
-0.9
CPT0086870003
Tumor
-0.9
CPT0002350011
Tumor
-0.9
CPT0019130003
Tumor
-0.9
CPT0092790003
Tumor
-1.0
CPT0064370003
Tumor
-1.0
CPT0012180003
Tumor
-1.0
CPT0069160003
Tumor
-1.0
CPT0015910003
Tumor
-1.0
CPT0077320001
Normal
-1.0
CPT0079410003
Tumor
-1.0
CPT0025230003
Tumor
-1.0
CPT0089460004
Tumor
-1.0
CPT0092190003
Normal
-1.1
CPT0001180009
Tumor
-1.1
CPT0002270011
Tumor
-1.1
CPT0092160003
Tumor
-1.1
CPT0088630003
Tumor
-1.2
CPT0065690003
Tumor
-1.2
CPT0014450004
Tumor
-1.2
CPT0025290003
Tumor
-1.2
CPT0000640003
Tumor
-1.3
CPT0010160003
Tumor
-1.3
CPT0063630003
Tumor
-1.3
CPT0088900003
Tumor
-1.3
CPT0017850003
Tumor
-1.4
CPT0092730003
Tumor
-1.4
CPT0088760003
Tumor
-1.4
CPT0084560003
Tumor
-1.4
CPT0081600003
Tumor
-1.5
CPT0078660003
Tumor
-1.5
CPT0079180003
Tumor
-1.5
CPT0086950003
Tumor
-1.5
CPT0079380003
Tumor
-1.7
CPT0088550004
Tumor
-2.8
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
