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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SELENOK is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
25.4
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
86.4
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
58.7
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
56.4
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
45.8
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
43.5
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
39.3
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
37.7
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
37.5
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
37.5
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
37.3
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
36.2
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
35.7
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
35.2
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
35.1
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
34.7
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
34.7
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
34.1
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
33.0
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
32.8
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
32.3
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
31.8
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
30.9
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
29.7
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
29.3
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
28.5
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
27.1
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
26.9
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
26.5
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
25.9
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
25.2
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
24.6
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
24.6
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
24.4
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
23.8
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
23.5
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
22.1
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
21.9
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
21.6
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
21.0
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
20.4
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
18.6
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
18.3
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
17.8
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
17.1
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
16.9
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
16.7
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
16.5
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
14.7
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
14.5
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
14.5
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
14.4
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
14.1
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
14.1
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
12.8
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
12.8
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
12.5
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
11.5
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
10.4
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
8.6
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
7.3
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
6.5
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
3.5
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
2.7
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SELENOK is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
32.1
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
107.4
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
87.2
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
77.4
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
68.1
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
68.0
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
68.0
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
66.9
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
66.4
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
65.8
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
64.8
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
64.6
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
63.3
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
63.0
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
62.2
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
61.4
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
60.7
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
60.0
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
59.5
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
59.2
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
57.8
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
57.2
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
56.6
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
56.6
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
53.7
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
53.6
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
53.4
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
51.5
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
51.5
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
51.2
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
50.6
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
49.7
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
49.4
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
49.3
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
49.3
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
48.9
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
48.8
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
48.2
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
47.6
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
47.4
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
47.2
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
47.2
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
47.2
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
47.1
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
47.1
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
47.1
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
46.6
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
46.1
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
45.9
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
45.9
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
45.9
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
45.7
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
45.5
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
45.4
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
45.4
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
45.3
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
44.4
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
44.4
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
44.3
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
44.3
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
44.1
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
44.0
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
43.8
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
43.5
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
43.3
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
43.0
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
42.9
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
42.8
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
42.6
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
42.0
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
42.0
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
42.0
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
42.0
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
41.9
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
41.8
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
41.8
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
41.5
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
41.5
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
41.4
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
41.2
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
41.1
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
41.1
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
41.1
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
40.8
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
40.8
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
40.7
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
40.4
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
40.3
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
40.3
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
40.3
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
40.2
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
40.2
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
40.1
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
40.0
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
40.0
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
39.8
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
39.6
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
39.5
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
39.5
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
39.5
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
39.5
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
39.2
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
39.2
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
39.1
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
39.0
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
39.0
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
38.8
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
38.7
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
38.7
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
38.6
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
38.5
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
38.4
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
38.3
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
38.1
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
38.0
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
37.9
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
37.6
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
37.6
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
37.5
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
37.4
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
37.2
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
37.2
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
37.2
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
37.2
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
37.1
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
37.1
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
37.0
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
37.0
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
36.9
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
36.9
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
36.8
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
36.6
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
36.5
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
36.5
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
36.5
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
36.3
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
36.2
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
36.2
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
36.1
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
35.9
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
35.8
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
35.8
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
35.8
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
35.8
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
35.8
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
35.7
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
35.6
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
35.5
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
35.4
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
35.4
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
35.3
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
35.3
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
35.2
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
35.2
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
35.1
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
35.1
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
35.1
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
35.1
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
35.1
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
35.0
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
35.0
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
34.9
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
34.8
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
34.8
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
34.8
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
34.7
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
34.7
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
34.7
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
34.6
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
34.6
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
34.6
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
34.6
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
34.5
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
34.5
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
34.4
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
34.4
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
34.3
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
34.3
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
34.2
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
34.2
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
34.2
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
34.2
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
34.1
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
34.0
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
34.0
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
34.0
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
34.0
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
33.9
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
33.9
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
33.8
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
33.8
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
33.7
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
33.6
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
33.4
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
33.4
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
33.3
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
33.3
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
33.3
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
33.3
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
33.3
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
33.3
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
33.3
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
33.2
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
33.1
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
33.0
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
32.9
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
32.8
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
32.7
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
32.7
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
32.6
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
32.6
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
32.6
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
32.6
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
32.6
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
32.5
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
32.5
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
32.5
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
32.4
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
32.4
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
32.3
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
32.2
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
32.1
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
32.1
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
32.1
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
32.0
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
32.0
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
32.0
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
31.9
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
31.9
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
31.9
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
31.8
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
31.8
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
31.7
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
31.7
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
31.7
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
31.7
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
31.7
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
31.6
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
31.6
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
31.5
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
31.5
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
31.4
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
31.3
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
31.3
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
31.2
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
31.2
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
31.2
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
31.1
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
31.0
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
30.9
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
30.9
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
30.9
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
30.9
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
30.9
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
30.8
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
30.8
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
30.8
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
30.7
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
30.7
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
30.7
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
30.7
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
30.7
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
30.6
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
30.6
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
30.5
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
30.4
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
30.4
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
30.4
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
30.3
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
30.3
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
30.2
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
30.2
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
30.2
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
30.1
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
30.1
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
30.0
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
30.0
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
29.9
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
29.9
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
29.8
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
29.8
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
29.8
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
29.7
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
29.6
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
29.6
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
29.6
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
29.5
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
29.5
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
29.2
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
29.2
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
29.2
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
29.2
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
29.1
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
29.1
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
29.1
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
29.0
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
29.0
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
28.9
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
28.9
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
28.9
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
28.9
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
28.8
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
28.8
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
28.8
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
28.8
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
28.8
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
28.7
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
28.7
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
28.6
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
28.6
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
28.6
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
28.4
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
28.4
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
28.4
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
28.2
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
28.0
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
28.0
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
28.0
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
28.0
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
28.0
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
27.9
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
27.9
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
27.8
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
27.8
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
27.8
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
27.7
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
27.7
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
27.7
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
27.6
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
27.5
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
27.5
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
27.5
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
27.5
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
27.4
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
27.3
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
27.3
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
27.2
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
27.2
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
27.2
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
27.2
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
27.1
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
27.0
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
26.9
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
26.9
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
26.9
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
26.9
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
26.9
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
26.9
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
26.8
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
26.7
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
26.7
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
26.7
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
26.6
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
26.6
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
26.5
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
26.5
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
26.5
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
26.4
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
26.4
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
26.3
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
26.3
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
26.2
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
26.2
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
26.2
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
26.1
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
26.0
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
26.0
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
26.0
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
25.9
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
25.8
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
25.8
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
25.8
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
25.5
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
25.5
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
25.5
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
25.4
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
25.3
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
25.3
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
25.3
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
25.3
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
25.3
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
25.3
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
25.2
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
25.1
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
25.1
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
25.1
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
25.1
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
25.1
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
25.0
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
25.0
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
25.0
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
25.0
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
24.9
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
24.9
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
24.8
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
24.8
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
24.7
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
24.6
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
24.5
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
24.5
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
24.5
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
24.5
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
24.4
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
24.4
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
24.3
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
24.3
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
24.3
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
24.2
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
24.2
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
24.2
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
24.2
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
24.0
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
23.9
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
23.9
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
23.9
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
23.8
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
23.8
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
23.6
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
23.5
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
23.5
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
23.5
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
23.4
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
23.4
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
23.4
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
23.3
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
23.3
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
23.2
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
23.2
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
23.1
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
22.8
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
22.8
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
22.8
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
22.8
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
22.8
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
22.6
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
22.6
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
22.5
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
22.5
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
22.5
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
22.5
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
22.5
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
22.4
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
22.4
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
22.4
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
22.4
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
22.4
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
22.3
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
22.2
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
22.1
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
22.1
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
22.1
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
21.9
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
21.9
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
21.8
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
21.7
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
21.7
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
21.6
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
21.5
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
21.5
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
21.4
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
21.4
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
21.4
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
21.1
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
21.0
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
20.9
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
20.9
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
20.8
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
20.8
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
20.7
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
20.7
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
20.7
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
20.5
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
20.5
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
20.5
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
20.2
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
20.2
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
20.2
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
19.9
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
19.9
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
19.7
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
19.7
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
19.7
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
19.5
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
19.4
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
19.2
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
19.1
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
19.1
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
19.0
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
18.9
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
18.9
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
18.9
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
18.9
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
18.6
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
18.6
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
18.4
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
18.3
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
18.2
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
18.2
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
18.1
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
18.1
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
17.9
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
17.3
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
17.2
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
17.0
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
17.0
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
16.9
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
16.9
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
16.9
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
16.8
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
16.4
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
16.3
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
16.3
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
16.2
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
15.9
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
15.8
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
15.7
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
14.6
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
14.3
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
14.3
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
13.0
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
11.3
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SELENOK is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
27.5
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
62.1
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
50.1
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
47.6
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
47.0
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
46.1
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
45.5
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
45.0
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
43.8
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
42.9
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
42.2
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
41.7
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
38.8
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
38.6
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
36.9
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
34.7
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
34.6
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
34.2
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
33.9
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
33.5
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
33.5
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
32.4
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
31.6
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
31.5
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
31.2
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
30.9
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
30.9
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
30.9
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
30.7
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
30.5
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
30.1
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
30.0
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
29.9
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
29.6
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
29.4
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
29.1
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
28.9
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
28.9
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
28.4
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
28.4
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
28.3
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
28.0
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
27.9
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
27.7
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
27.5
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
27.5
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
27.4
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
27.3
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
26.6
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
26.5
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
26.4
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
26.3
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
26.1
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
26.1
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
26.1
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
26.0
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
25.7
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
25.7
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
25.6
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
25.4
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
25.3
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
25.0
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
24.8
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
24.7
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
24.1
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
23.9
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
23.9
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
23.7
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
23.3
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
23.1
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
23.0
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
22.6
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
22.4
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
21.7
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
21.6
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
21.5
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
21.5
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
20.8
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
20.8
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
20.5
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
20.5
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
20.4
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
20.1
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
20.0
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
19.6
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
19.5
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
18.9
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
18.8
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
18.4
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
18.3
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
18.1
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
16.5
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
16.5
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
16.1
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
15.4
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
14.5
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
14.5
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
13.9
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
13.6
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
13.6
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SELENOK is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
40.3
Number of samples
282
Samples
Sample
Description
TPM
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
100.8
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
94.2
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
92.4
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
89.3
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
85.9
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
82.3
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
81.4
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
79.4
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
79.0
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
77.6
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
76.9
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
75.9
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
75.8
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
75.0
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
74.2
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
73.8
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
73.2
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
71.1
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
70.0
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
69.9
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
69.7
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
69.4
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
69.1
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
67.5
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
66.8
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
66.0
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
65.9
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
65.9
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
65.6
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
65.5
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
63.9
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
63.4
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
62.4
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
61.1
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
60.9
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
60.9
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
60.1
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
60.1
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
59.9
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
59.6
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
59.1
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
58.7
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
58.2
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
57.5
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
57.2
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
56.6
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
56.2
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
56.2
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
55.9
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
55.5
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
55.1
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
54.7
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
54.7
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
54.6
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
54.5
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
54.2
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
54.2
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
53.9
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
53.6
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
53.5
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
53.1
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
53.1
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
53.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
52.8
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
52.5
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
52.4
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
52.2
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
52.2
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
52.1
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
51.3
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
51.2
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
51.0
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
51.0
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
51.0
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
50.2
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
50.2
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
50.1
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
50.1
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
50.0
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
49.6
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
49.2
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
49.1
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
48.9
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
48.3
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
47.8
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
47.8
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
46.9
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
46.9
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
46.6
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
46.4
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
46.3
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
46.2
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
46.1
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
45.8
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
45.7
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
45.7
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
45.6
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
45.4
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
45.4
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
45.4
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
45.4
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
45.2
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
45.2
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
44.9
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
44.8
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
44.7
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
44.3
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
44.3
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
43.7
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
43.7
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
43.6
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
43.5
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
43.4
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
43.2
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
43.1
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
42.9
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
42.8
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
42.6
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
42.4
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
42.3
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
42.1
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
42.0
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
41.5
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
41.5
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
41.3
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
41.2
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
41.1
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
41.0
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
40.9
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
40.8
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
40.6
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
40.6
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
40.4
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
40.2
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
39.9
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
39.9
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
39.9
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
39.8
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
39.8
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
39.8
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
39.7
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
39.7
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
39.6
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
39.5
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
39.4
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
39.4
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
39.3
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
39.3
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
38.7
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
38.7
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
38.7
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
38.4
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
38.2
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
38.2
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
37.8
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
37.7
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
37.6
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
37.1
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
36.9
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
36.8
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
36.7
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
36.7
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
36.6
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
36.5
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
36.4
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
35.8
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
35.4
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
35.3
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
35.1
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
35.1
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
35.0
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
34.8
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
34.6
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
34.6
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
34.6
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
34.2
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
34.1
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
34.1
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
33.8
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
33.6
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
33.5
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
33.4
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
33.3
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
33.2
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
33.2
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
33.2
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
33.1
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
33.1
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
33.1
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
32.9
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
32.9
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
32.8
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
32.8
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
32.7
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
32.6
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
32.6
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
32.6
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
32.4
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
31.9
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
31.8
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
31.8
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
31.6
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
31.6
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
31.6
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
30.7
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
30.7
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
30.2
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
30.1
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
30.0
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
29.9
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
29.7
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
29.2
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
28.9
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
28.4
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
28.3
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
28.0
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
28.0
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
27.1
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
27.0
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
26.8
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
26.8
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
26.7
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
26.6
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
26.0
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
26.0
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
25.9
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
25.5
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
25.4
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
25.4
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
25.3
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
25.2
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
25.1
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
25.1
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
25.0
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
24.8
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
24.4
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
24.0
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
23.4
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
23.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
22.6
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
22.2
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
21.7
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
21.3
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
21.2
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
21.1
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
19.5
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
19.4
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
19.1
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
19.1
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
19.0
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
19.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
19.0
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
18.9
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
17.5
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
17.1
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
16.7
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
15.8
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
15.4
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
14.5
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
14.2
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
13.6
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
13.5
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
13.4
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
12.8
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
10.9
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
10.8
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
10.3
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
10.3
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
9.2
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
7.6
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
5.2
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
4.9
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
4.4
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
4.3
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
4.2
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
3.9
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
3.0
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
3.0
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
2.7
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
0.0
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
0.0
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0007870001
Normal
1.9
CPT0001260009
Tumor
1.5
CPT0088550004
Tumor
1.4
CPT0002350011
Tumor
1.0
CPT0001180009
Tumor
1.0
CPT0092740003
Normal
0.9
CPT0088970003
Tumor
0.9
CPT0001270001
Normal
0.8
CPT0078800003
Tumor
0.7
CPT0012180003
Tumor
0.6
CPT0092190003
Normal
0.5
CPT0075130003
Tumor
0.5
CPT0001190001
Normal
0.5
CPT0063330001
Normal
0.5
CPT0089040001
Normal
0.4
CPT0084590001
Normal
0.4
CPT0000790001
Normal
0.4
CPT0081880003
Tumor
0.4
CPT0001340003
Tumor
0.3
CPT0066430001
Normal
0.3
CPT0023350003
Tumor
0.3
CPT0014450004
Tumor
0.3
CPT0089480003
Normal
0.3
CPT0086830003
Normal
0.3
CPT0092730003
Tumor
0.3
CPT0086820003
Tumor
0.3
CPT0012550003
Tumor
0.3
CPT0078660003
Tumor
0.3
CPT0077140001
Normal
0.3
CPT0066520001
Normal
0.3
CPT0086890003
Normal
0.3
CPT0079430001
Normal
0.3
CPT0092310003
Normal
0.3
CPT0088500001
Normal
0.3
CPT0002270011
Tumor
0.2
CPT0088640003
Normal
0.2
CPT0092160003
Tumor
0.2
CPT0092290003
Tumor
0.2
CPT0001350001
Normal
0.2
CPT0086970003
Normal
0.2
CPT0088920001
Normal
0.2
CPT0023710001
Normal
0.2
CPT0014350001
Normal
0.2
CPT0025920001
Normal
0.2
CPT0088480003
Tumor
0.2
CPT0063640001
Normal
0.2
CPT0092800003
Normal
0.2
CPT0075170001
Normal
0.2
CPT0001550001
Normal
0.2
CPT0078840001
Normal
0.2
CPT0000660001
Normal
0.1
CPT0013790003
Normal
0.1
CPT0017450001
Normal
0.1
CPT0086360003
Tumor
0.1
CPT0007470001
Normal
0.1
CPT0000890001
Normal
0.1
CPT0086370003
Normal
0.1
CPT0006530001
Normal
0.1
CPT0079180003
Tumor
0.1
CPT0079410003
Tumor
0.1
CPT0014130001
Normal
0.1
CPT0065430003
Tumor
0.1
CPT0077500001
Normal
0.1
CPT0088780001
Normal
0.1
CPT0088710001
Normal
0.1
CPT0088570001
Normal
0.1
CPT0088630003
Tumor
0.1
CPT0014160003
Tumor
0.1
CPT0019160001
Normal
0.1
CPT0006950001
Normal
0.1
CPT0078940001
Normal
0.1
CPT0065820001
Normal
0.1
CPT0023360001
Normal
0.1
CPT0015730003
Tumor
0.1
CPT0075570001
Normal
0.1
CPT0079510001
Normal
0.1
CPT0011410003
Tumor
0.1
CPT0079000001
Normal
0.1
CPT0078670001
Normal
0.1
CPT0014470001
Normal
0.1
CPT0077320001
Normal
0.0
CPT0065750003
Tumor
0.0
CPT0026420001
Normal
0.0
CPT0078530001
Normal
0.0
CPT0063630003
Tumor
0.0
CPT0078830003
Tumor
0.0
CPT0075720003
Tumor
0.0
CPT0078990003
Tumor
0.0
CPT0001510001
Normal
0.0
CPT0089020003
Tumor
0.0
CPT0001540009
Tumor
0.0
CPT0064400001
Normal
0.0
CPT0015810003
Tumor
0.0
CPT0079380003
Tumor
0.0
CPT0084560003
Tumor
0.0
CPT0071150004
Tumor
0.0
CPT0092790003
Tumor
0.0
CPT0020130001
Normal
0.0
CPT0088690003
Tumor
0.0
CPT0019130003
Tumor
-0.1
CPT0087050003
Normal
-0.1
CPT0020020001
Normal
-0.1
CPT0009080003
Normal
-0.1
CPT0025170003
Tumor
-0.1
CPT0065870003
Tumor
-0.1
CPT0001220008
Tumor
-0.1
CPT0025060001
Normal
-0.1
CPT0025610001
Normal
-0.1
CPT0025050003
Tumor
-0.1
CPT0079230003
Tumor
-0.1
CPT0079300001
Normal
-0.1
CPT0066470004
Tumor
-0.1
CPT0075560003
Tumor
-0.1
CPT0065810003
Tumor
-0.1
CPT0025290003
Tumor
-0.1
CPT0079480003
Tumor
-0.1
CPT0001500009
Tumor
-0.1
CPT0012570003
Normal
-0.1
CPT0020120003
Tumor
-0.1
CPT0023690003
Tumor
-0.1
CPT0010110003
Tumor
-0.1
CPT0077310003
Tumor
-0.1
CPT0001230001
Normal
-0.1
CPT0000780007
Tumor
-0.1
CPT0012770003
Normal
-0.1
CPT0081600003
Tumor
-0.1
CPT0088760003
Tumor
-0.1
CPT0025880003
Tumor
-0.2
CPT0081620001
Normal
-0.2
CPT0063320003
Tumor
-0.2
CPT0025580004
Tumor
-0.2
CPT0007320003
Tumor
-0.2
CPT0087040003
Tumor
-0.2
CPT0025230003
Tumor
-0.2
CPT0089460004
Tumor
-0.2
CPT0086950003
Tumor
-0.2
CPT0000870016
Tumor
-0.2
CPT0006900003
Tumor
-0.2
CPT0026410003
Tumor
-0.2
CPT0085670003
Tumor
-0.2
CPT0006730001
Normal
-0.2
CPT0010160003
Tumor
-0.2
CPT0065450001
Normal
-0.2
CPT0012920003
Normal
-0.2
CPT0006630003
Tumor
-0.3
CPT0065690003
Tumor
-0.3
CPT0066480003
Tumor
-0.3
CPT0025110003
Tumor
-0.3
CPT0002370001
Normal
-0.3
CPT0025350003
Tumor
-0.3
CPT0012370003
Tumor
-0.3
CPT0077490003
Tumor
-0.3
CPT0009020003
Normal
-0.3
CPT0012640003
Normal
-0.3
CPT0079270003
Tumor
-0.3
CPT0010170001
Normal
-0.3
CPT0024670003
Tumor
-0.3
CPT0086030003
Tumor
-0.3
CPT0017850003
Tumor
-0.3
CPT0006440003
Tumor
-0.4
CPT0024680001
Normal
-0.4
CPT0086870003
Tumor
-0.4
CPT0018250001
Normal
-0.4
CPT0078930003
Tumor
-0.4
CPT0088900003
Tumor
-0.4
CPT0076330003
Tumor
-0.4
CPT0014370004
Tumor
-0.4
CPT0012670003
Tumor
-0.4
CPT0019990003
Tumor
-0.5
CPT0012290003
Normal
-0.5
CPT0010120001
Normal
-0.5
CPT0000640003
Tumor
-0.5
CPT0012280003
Tumor
-0.5
CPT0021240003
Tumor
-0.5
CPT0015910003
Tumor
-0.6
CPT0007860003
Tumor
-0.6
CPT0009060003
Tumor
-0.6
CPT0076350001
Normal
-0.6
CPT0012090003
Normal
-0.6
CPT0064370003
Tumor
-0.7
CPT0012080003
Tumor
-0.7
CPT0011240003
Tumor
-0.7
CPT0017410003
Tumor
-0.7
CPT0009000003
Tumor
-0.7
CPT0065930003
Tumor
-0.7
CPT0082010001
Normal
-0.8
CPT0077110003
Tumor
-1.0
CPT0069010001
Normal
-1.0
CPT0069000003
Tumor
-1.0
CPT0012900004
Tumor
-1.0
CPT0069160003
Tumor
-1.1
CPT0078510003
Tumor
-1.1
CPT0081990003
Tumor
-1.4
CPT0069190001
Normal
-1.5
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
