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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
WWC1 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
14.3
Number of samples
362
Samples
Sample
Description
TPM
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
166.8
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
127.8
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
115.6
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
95.2
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
91.9
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
70.2
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
61.2
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
59.3
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
48.1
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
46.2
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
45.9
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
45.8
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
43.6
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
43.4
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
41.9
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
40.1
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
38.6
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
36.5
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
34.6
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
33.5
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
33.2
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
33.0
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
31.8
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
31.2
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
30.3
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
28.1
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
28.0
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
27.5
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
27.5
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
27.5
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
27.2
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
26.8
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
26.4
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
26.0
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
26.0
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
25.8
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
25.5
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
25.4
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
24.4
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
24.2
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
24.0
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
23.8
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
22.7
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
22.7
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
22.6
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
22.0
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
21.9
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
21.8
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
21.7
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
21.7
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
21.4
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
21.4
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
20.7
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
20.6
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
20.6
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
20.6
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
20.3
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
20.1
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
20.1
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
19.9
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
19.5
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
19.5
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
19.4
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
19.3
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
19.2
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
19.0
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
19.0
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
18.8
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
18.5
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
18.3
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
18.2
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
18.2
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
18.2
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
18.1
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
18.1
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
18.1
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
17.9
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
17.8
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
17.5
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
17.3
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
17.3
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
17.2
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
17.1
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
17.0
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
17.0
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
17.0
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
16.7
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
16.7
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
16.7
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
16.7
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
16.6
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
16.2
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
16.0
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
16.0
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
15.9
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
15.8
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
15.8
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
15.7
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
15.6
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
15.5
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
15.5
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
15.4
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
15.4
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
15.1
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
15.1
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
15.0
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
14.8
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
14.8
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
14.8
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
14.7
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
14.7
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
14.6
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
14.6
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
14.6
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
14.5
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
14.5
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
14.4
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
14.4
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
14.3
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
14.2
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
14.2
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
14.1
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
14.1
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
13.9
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
13.9
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
13.9
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
13.7
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
13.7
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
13.5
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
13.4
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
13.4
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
13.3
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
13.3
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
13.3
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
13.3
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
13.2
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
13.2
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
13.1
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
13.1
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
12.9
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
12.8
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
12.8
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
12.7
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
12.7
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
12.6
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
12.6
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
12.6
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
12.5
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
12.4
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
12.4
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
12.3
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
12.3
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
12.2
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
12.2
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
12.2
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
12.2
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
12.1
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
12.1
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
12.0
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
12.0
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
11.9
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
11.9
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
11.8
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
11.7
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
11.7
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
11.6
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
11.6
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
11.6
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
11.5
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
11.4
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
11.4
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
11.2
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
11.1
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
11.1
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
11.1
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
11.1
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
11.1
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
10.9
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
10.9
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
10.9
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
10.7
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
10.7
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
10.7
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
10.6
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
10.5
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
10.5
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
10.5
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
10.3
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
10.3
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
10.3
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
10.3
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
10.1
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
10.1
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
10.0
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
9.9
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
9.9
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
9.8
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
9.8
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
9.8
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
9.7
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
9.7
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
9.7
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
9.6
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
9.6
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
9.6
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
9.6
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
9.5
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
9.5
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
9.3
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
9.3
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
9.3
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
9.2
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
9.1
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
9.1
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
9.1
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
9.1
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
9.0
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
9.0
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
9.0
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
8.9
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
8.9
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
8.8
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
8.8
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
8.7
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
8.7
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
8.7
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
8.7
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
8.6
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
8.5
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
8.5
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
8.5
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
8.4
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
8.4
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
8.4
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
8.1
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
8.1
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
8.1
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
8.1
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
8.1
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
8.0
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
8.0
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
7.9
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
7.9
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
7.8
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
7.7
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
7.7
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
7.6
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
7.6
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
7.5
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
7.5
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
7.4
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
7.3
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
7.3
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
7.3
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
7.3
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
7.3
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
7.2
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
7.2
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
7.0
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
7.0
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
7.0
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
7.0
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
6.9
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
6.9
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
6.8
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
6.8
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
6.8
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
6.7
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
6.6
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
6.5
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
6.5
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
6.5
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
6.5
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
6.4
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
6.3
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
6.2
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
6.2
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
6.2
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
6.2
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
6.1
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
6.1
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
5.9
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
5.8
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
5.8
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
5.7
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
5.7
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
5.6
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
5.6
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
5.6
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
5.6
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
5.5
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
5.5
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
5.4
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
5.4
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
5.3
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
5.3
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
5.3
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
5.2
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
5.2
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
5.2
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
5.1
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
5.1
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
4.9
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
4.8
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
4.7
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
4.7
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
4.7
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
4.7
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
4.6
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
4.6
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
4.6
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
4.6
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
4.5
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
4.5
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
4.5
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
4.5
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
4.4
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
4.4
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
4.4
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
4.3
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
4.3
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
4.3
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
4.3
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
4.3
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
4.3
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
4.2
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
4.2
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
4.1
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
4.1
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
4.1
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
4.0
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
3.9
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
3.8
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
3.8
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
3.6
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
3.6
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
3.5
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
3.5
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
3.4
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
3.3
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
3.1
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
3.0
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
3.0
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
3.0
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
2.9
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
2.9
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
2.8
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
2.6
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
2.4
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
2.3
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
2.3
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
2.2
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
2.0
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
2.0
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
1.9
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
1.8
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
1.8
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
1.6
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
1.6
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
1.5
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
1.3
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
WWC1 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
6.3
Number of samples
231
Samples
Sample
Description
TPM
DO45303
0 years, female, NA, stage:3, alive, 990 days
51.2
DO45283
0 years, male, NA, stage:3, alive, 510 days
39.0
DO45305
0 years, male, NA, stage:4, alive, 300 days
38.3
DO23544
0 years, male, NA, stage:2, alive, 960 days
32.8
DO45249
0 years, male, NA, stage:1, alive, 630 days
27.8
DO50819
0 years, female, NA, stage:2, alive, 510 days
24.1
DO48732
0 years, male, NA, stage:3, alive, 630 days
19.2
DO45195
0 years, male, NA, stage:1, alive, 390 days
17.6
DO45301
0 years, male, NA, stage:2, dead, 1440 days
17.3
DO23518
0 years, male, NA, stage:2, alive, 1320 days
17.2
DO45167
0 years, male, NA, stage:2, dead, 1440 days
16.5
DO45189
0 years, female, NA, stage:2, alive, 1200 days
16.3
DO23524
0 years, female, NA, stage:2, alive, 1050 days
16.1
DO45277
0 years, male, NA, stage:3, alive, 600 days
15.6
DO45289
0 years, female, NA, stage:3, alive, 360 days
15.5
DO45139
0 years, male, NA, stage:3, alive, 1320 days
14.5
DO45237
0 years, male, NA, stage:2, alive, 900 days
14.3
DO45245
0 years, female, NA, stage:2, dead, 240 days
13.5
DO45285
0 years, male, NA, stage:3, alive, 480 days
13.3
DO45297
0 years, female, NA, stage:4, dead, 1260 days
12.8
DO23551
0 years, male, NA, stage:3, dead, 150 days
11.9
DO45119
0 years, male, NA, stage:3, dead, 510 days
11.9
DO45159
0 years, male, NA, stage:3, alive, 1470 days
11.8
DO50845
0 years, male, NA, stage:3, alive, 210 days
10.9
DO45219
0 years, male, NA, stage:2, alive, 1080 days
10.8
DO48716
0 years, male, NA, stage:2, alive, 720 days
10.6
DO45275
0 years, male, NA, stage:3, dead, 10 days
10.5
DO48733
0 years, male, NA, stage:2, alive, 600 days
10.2
DO48717
0 years, male, NA, stage:4, dead, 180 days
10.0
DO45253
0 years, male, NA, stage:2, alive, 870 days
9.8
DO45225
0 years, male, NA, stage:1, alive, 1050 days
9.4
DO45096
0 years, male, NA, stage:2, dead, 1290 days
9.4
DO45279
0 years, male, NA, stage:3, alive, 1290 days
9.4
DO45105
0 years, male, NA, stage:1, alive, 1680 days
9.3
DO50850
0 years, male, NA, stage:3, alive, 720 days
9.0
DO48700
0 years, female, NA, stage:2, alive, 810 days
8.9
DO48742
0 years, male, NA, stage:2, alive, 600 days
8.8
DO45121
0 years, male, NA, stage:3, alive, 1530 days
8.8
DO45149
0 years, female, NA, stage:2, alive, 1260 days
8.8
DO45213
0 years, male, NA, stage:1, alive, 1200 days
8.7
DO50811
0 years, male, NA, stage:1, alive, 450 days
8.7
DO23528
0 years, female, NA, stage:2, alive, 1020 days
8.5
DO23545
0 years, male, NA, stage:2, dead, 570 days
8.4
DO45137
0 years, male, NA, stage:1, alive, 1320 days
8.3
DO45113
0 years, male, NA, stage:3, alive, 1560 days
8.1
DO45299
0 years, female, NA, stage:1, alive, 1440 days
8.0
DO45099
0 years, male, NA, stage:3, alive, 1590 days
8.0
DO45241
0 years, male, NA, stage:1, alive, 1080 days
7.8
DO50829
0 years, male, NA, stage:3, alive, 570 days
7.8
DO50804
0 years, male, NA, stage:2, alive, 720 days
7.6
DO23538
0 years, male, NA, stage:2, alive, 450 days
7.5
DO23512
0 years, male, NA, stage:1, alive, 1260 days
7.4
DO45221
0 years, female, NA, stage:4, dead, 390 days
7.4
DO48743
0 years, female, NA, stage:2, alive, 570 days
7.4
DO23535
0 years, male, NA, stage:1, alive, 960 days
7.3
DO45157
0 years, male, NA, stage:2, alive, 1980 days
7.2
DO45115
0 years, male, NA, stage:2, alive, 840 days
7.2
DO23552
0 years, female, NA, stage:1, alive, 810 days
7.1
DO45259
0 years, male, NA, stage:3, alive, 330 days
7.1
DO50798
0 years, male, NA, stage:3, dead, 30 days
7.1
DO45092
0 years, male, NA, stage:4, dead, 1200 days
7.1
DO45143
0 years, male, NA, stage:3, alive, 1290 days
7.0
DO50855
0 years, male, NA, stage:2, alive, 570 days
7.0
DO45267
0 years, male, NA, stage:3, dead, 570 days
6.9
DO48736
0 years, female, NA, stage:1, alive, 600 days
6.7
DO48723
0 years, male, NA, stage:1, alive, 600 days
6.6
DO45207
0 years, male, NA, stage:1, alive, 1050 days
6.5
DO45229
0 years, male, NA, stage:1, alive, 990 days
6.5
DO45273
0 years, male, NA, stage:2, alive, 480 days
6.5
DO45103
0 years, male, NA, stage:3, alive, 450 days
6.5
DO48697
0 years, female, NA, stage:2, dead, 810 days
6.4
DO50813
0 years, male, NA, stage:2, alive, 420 days
6.4
DO45231
0 years, male, NA, stage:2, alive, 930 days
6.4
DO23510
0 years, female, NA, stage:2, alive, 870 days
6.3
DO50778
0 years, male, NA, stage:4, alive, 630 days
6.3
DO23537
0 years, male, NA, stage:2, dead, 900 days
6.3
DO45101
0 years, male, NA, stage:2, alive, 1680 days
6.1
DO23541
0 years, male, NA, stage:2, alive, 930 days
6.1
DO23527
0 years, male, NA, stage:1, alive, 1050 days
6.1
DO50820
0 years, female, NA, stage:3, alive, 510 days
6.0
DO45131
0 years, male, NA, stage:4, dead, 360 days
6.0
DO23515
0 years, male, NA, stage:2, alive, 1230 days
6.0
DO50844
0 years, male, NA, stage:4, alive, 300 days
5.9
DO23540
0 years, male, NA, stage:1, alive, 750 days
5.9
DO45197
0 years, male, NA, stage:2, alive, 1170 days
5.9
DO48679
0 years, male, NA, stage:2, alive, 1200 days
5.9
DO48725
0 years, male, NA, stage:1, alive, 780 days
5.9
DO45185
0 years, male, NA, stage:2, alive, 600 days
5.7
DO48695
0 years, male, NA, stage:2, alive, 720 days
5.7
DO45169
0 years, male, NA, stage:3, alive, 1350 days
5.6
DO45265
0 years, male, NA, stage:3, alive, 1020 days
5.6
DO45179
0 years, female, NA, stage:2, alive, 600 days
5.6
DO45251
0 years, female, NA, stage:2, alive, 900 days
5.6
DO50818
0 years, male, NA, stage:2, alive, 510 days
5.4
DO23542
0 years, male, NA, stage:3, alive, 960 days
5.4
DO45239
0 years, male, NA, stage:2, alive, 870 days
5.3
DO45173
0 years, male, NA, stage:3, alive, 1170 days
5.3
DO45097
0 years, male, NA, stage:3, alive, 1620 days
5.2
DO45233
0 years, male, NA, stage:3, alive, 900 days
5.2
DO45153
0 years, female, NA, stage:2, alive, 1380 days
5.2
DO50787
0 years, male, NA, stage:3, alive, 480 days
5.2
DO50800
0 years, male, NA, stage:2, alive, 510 days
5.2
DO50822
0 years, male, NA, stage:2, alive, 510 days
5.2
DO45235
0 years, female, NA, stage:1, alive, 900 days
5.2
DO50776
0 years, male, NA, stage:1, alive, 690 days
5.1
DO50793
0 years, male, NA, stage:4, alive, 540 days
5.1
DO50825
0 years, male, NA, stage:2, alive, 390 days
5.1
DO23539
0 years, male, NA, stage:1, alive, 1110 days
5.1
DO45183
0 years, female, NA, stage:2, dead, 570 days
5.1
DO50805
0 years, male, NA, stage:2, alive, 690 days
5.0
DO23548
0 years, female, NA, stage:1, alive, 840 days
5.0
DO45255
0 years, male, NA, stage:3, alive, 720 days
5.0
DO45307
0 years, female, NA, stage:4, dead, 240 days
5.0
DO23543
0 years, male, NA, stage:2, alive, 1020 days
5.0
DO45165
0 years, male, NA, stage:2, alive, 690 days
5.0
DO48730
0 years, female, NA, stage:2, alive, 630 days
5.0
DO45287
0 years, male, NA, stage:1, alive, 390 days
4.9
DO48746
0 years, male, NA, stage:3, alive, 570 days
4.9
DO45223
0 years, male, NA, stage:4, alive, 1020 days
4.9
DO45127
0 years, male, NA, stage:3, dead, 420 days
4.8
DO45111
0 years, male, NA, stage:2, alive, 1590 days
4.7
DO45181
0 years, female, NA, stage:2, alive, 1200 days
4.7
DO50799
0 years, female, NA, stage:2, alive, 540 days
4.7
DO45091
0 years, male, NA, stage:2, dead, 1320 days
4.7
DO23546
0 years, male, NA, stage:2, alive, 1050 days
4.7
DO45217
0 years, female, NA, stage:3, dead, 270 days
4.6
DO23550
0 years, male, NA, stage:1, alive, 990 days
4.6
DO48728
0 years, female, NA, stage:2, alive, 150 days
4.6
DO45161
0 years, male, NA, stage:2, dead, 540 days
4.6
DO45095
0 years, male, NA, stage:2, alive, 1620 days
4.6
DO23508
0 years, female, NA, stage:2, alive, 390 days
4.6
DO23536
0 years, male, NA, stage:2, alive, 930 days
4.6
DO45135
0 years, male, NA, stage:1, alive, 1410 days
4.6
DO23511
0 years, female, NA, stage:3, dead, 180 days
4.5
DO45263
0 years, male, NA, stage:3, dead, 270 days
4.5
DO50789
0 years, female, NA, stage:2, alive, 570 days
4.5
DO45203
0 years, female, NA, stage:2, alive, 1170 days
4.5
DO23526
0 years, male, NA, stage:3, alive, 1050 days
4.5
DO45109
0 years, male, NA, stage:2, alive, 1590 days
4.5
DO48720
0 years, female, NA, stage:2, alive, 570 days
4.4
DO23519
0 years, male, NA, stage:3, alive, 630 days
4.4
DO45247
0 years, female, NA, stage:2, alive, 210 days
4.4
DO45093
0 years, male, NA, stage:2, dead, 720 days
4.4
DO45125
0 years, male, NA, stage:3, alive, 1680 days
4.3
DO45257
0 years, male, NA, stage:3, alive, 810 days
4.3
DO50802
0 years, male, NA, stage:2, alive, 930 days
4.2
DO48704
0 years, female, NA, stage:3, alive, 750 days
4.1
DO50791
0 years, female, NA, stage:1, dead, 480 days
4.1
DO45187
0 years, female, NA, stage:1, alive, 1260 days
4.1
DO50806
0 years, male, NA, stage:4, alive, 540 days
4.1
DO45205
0 years, female, NA, stage:2, dead, 90 days
4.1
DO45193
0 years, female, NA, stage:4, dead, 120 days
4.0
DO45243
0 years, female, NA, stage:3, alive, 930 days
4.0
DO50832
0 years, male, NA, stage:3, alive, 90 days
4.0
DO45227
0 years, female, NA, stage:2, alive, 1020 days
4.0
DO48760
0 years, female, NA, stage:2, alive, 690 days
3.9
DO45201
0 years, male, NA, stage:1, alive, 900 days
3.9
DO48681
0 years, male, NA, stage:2, alive, 900 days
3.8
DO45209
0 years, male, NA, stage:4, alive, 1350 days
3.7
DO50815
0 years, male, NA, stage:3, alive, 150 days
3.7
DO50816
0 years, male, NA, stage:2, alive, 390 days
3.6
DO48701
0 years, male, NA, stage:2, alive, 780 days
3.6
DO45261
0 years, male, NA, stage:3, alive, 990 days
3.5
DO50808
0 years, male, NA, stage:2, alive, 570 days
3.5
DO23532
0 years, female, NA, stage:1, alive, 960 days
3.5
DO45094
0 years, male, NA, stage:3, alive, 1650 days
3.5
DO50783
0 years, male, NA, stage:3, alive, 480 days
3.4
DO48761
0 years, male, NA, stage:2, alive, 870 days
3.4
DO45141
0 years, male, NA, stage:2, alive, 1320 days
3.4
DO50817
0 years, male, NA, stage:2, alive, 390 days
3.4
DO48721
0 years, female, NA, stage:1, alive, 900 days
3.4
DO48715
0 years, female, NA, stage:2, dead, 690 days
3.3
DO23533
0 years, male, NA, stage:2, alive, 900 days
3.3
DO23530
0 years, male, NA, stage:4, dead, 180 days
3.3
DO48737
0 years, male, NA, stage:1, alive, 720 days
3.3
DO48712
0 years, male, NA, stage:2, alive, 810 days
3.3
DO45177
0 years, female, NA, stage:3, alive, 1260 days
3.2
DO50807
0 years, male, NA, stage:1, alive, 540 days
3.2
DO227801
0 years, female, NA, stage:1, alive, 660 days
3.2
DO23516
0 years, male, NA, stage:3, dead, 20 days
3.1
DO50809
0 years, male, NA, stage:3, dead, 720 days
3.1
DO45107
0 years, female, NA, stage:2, alive, 1710 days
3.1
DO50774
0 years, female, NA, stage:2, alive, 720 days
3.1
DO45191
0 years, female, NA, stage:2, alive, 1200 days
3.0
DO45281
0 years, male, NA, stage:4, alive, 750 days
3.0
DO45269
0 years, male, NA, stage:3, alive, 750 days
2.9
DO45145
0 years, male, NA, stage:3, dead, 60 days
2.9
DO45155
0 years, male, NA, stage:2, alive, 2160 days
2.8
DO48706
0 years, male, NA, stage:2, alive, 870 days
2.8
DO45215
0 years, male, NA, stage:2, alive, 1170 days
2.7
DO23521
0 years, male, NA, stage:3, alive, 1110 days
2.7
DO50803
0 years, female, NA, stage:1, alive, 540 days
2.6
DO227643
0 years, male, NA, stage:2, alive, 1260 days
2.6
DO45211
0 years, male, NA, stage:3, alive, 240 days
2.5
DO23517
0 years, male, NA, stage:2, alive, 1200 days
2.5
DO48693
0 years, male, NA, stage:2, alive, 900 days
2.5
DO45129
0 years, male, NA, stage:3, alive, 1470 days
2.5
DO48759
0 years, male, NA, stage:3, alive, 720 days
2.5
DO50839
0 years, female, NA, stage:3, alive, 330 days
2.4
DO50859
0 years, male, NA, stage:2, alive, 180 days
2.4
DO23547
0 years, male, NA, stage:1, alive, 1020 days
2.3
DO45163
0 years, male, NA, stage:2, alive, 960 days
2.2
DO23525
0 years, male, NA, stage:4, alive, 1050 days
2.1
DO45123
0 years, female, NA, stage:2, dead, 570 days
2.1
DO48741
0 years, male, NA, stage:3, alive, 240 days
2.1
DO23549
0 years, male, NA, stage:3, alive, 990 days
2.1
DO48719
0 years, male, NA, stage:2, alive, 690 days
2.1
DO50840
0 years, male, NA, stage:2, alive, 330 days
2.0
DO23513
0 years, male, NA, stage:3, alive, 1200 days
2.0
DO48757
0 years, female, NA, stage:3, alive, 480 days
1.9
DO45199
0 years, female, NA, stage:2, alive, 1350 days
1.9
DO23531
0 years, female, NA, stage:3, alive, 900 days
1.9
DO48677
0 years, male, NA, stage:3, alive, 1140 days
1.8
DO48682
0 years, female, NA, stage:3, dead, 120 days
1.7
DO48727
0 years, female, NA, stage:2, dead, 390 days
1.7
DO48672
0 years, male, NA, stage:2, alive, 450 days
1.6
DO48751
0 years, male, NA, stage:2, dead, 480 days
1.6
DO45117
0 years, female, NA, stage:2, dead, 1110 days
1.6
DO23534
0 years, male, NA, stage:2, alive, 840 days
1.5
DO50785
0 years, male, NA, stage:4, dead, 90 days
1.5
DO48674
0 years, male, NA, stage:2, alive, 1260 days
1.4
DO50857
0 years, male, NA, stage:2, alive, 210 days
1.4
DO48747
0 years, male, NA, stage:3, alive, 540 days
1.3
DO45171
0 years, male, NA, stage:3, alive, 600 days
1.3
DO23529
0 years, male, NA, stage:4, alive, 930 days
1.0
DO45133
0 years, male, NA, stage:3, dead, 660 days
0.7
DO23509
0 years, male, NA, stage:3, dead, 780 days
0.6
DO23514
0 years, male, NA, stage:2, alive, 1290 days
0.6
DO45175
0 years, male, NA, stage:2, alive, 1140 days
0.5
DO50814
0 years, male, NA, stage:3, alive, 420 days
0.5
DO23523
0 years, male, NA, stage:3, alive, 1080 days
0.1
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
615
Tumor
1.1
937
Tumor
1.0
131
Tumor
1.0
627
Tumor
1.0
1041
Tumor
1.0
851
Tumor
0.9
375
Tumor
0.8
635
Tumor
0.8
533
Tumor
0.8
617
Tumor
0.8
713
Tumor
0.8
967
Tumor
0.7
951
Tumor
0.7
882
Normal
0.6
127
Tumor
0.6
145
Tumor
0.6
146
Normal
0.5
981
Tumor
0.5
616
Normal
0.5
721
Tumor
0.5
132
Normal
0.5
857
Tumor
0.5
755
Tumor
0.5
142
Normal
0.5
685
Tumor
0.5
527
Tumor
0.5
471
Tumor
0.5
271
Tumor
0.5
473
Tumor
0.4
416
Normal
0.4
478
Normal
0.4
186
Normal
0.4
911
Tumor
0.4
641
Tumor
0.4
975
Tumor
0.4
393
Tumor
0.4
482
Normal
0.4
327
Tumor
0.4
231
Tumor
0.4
884
Normal
0.4
513
Tumor
0.4
878
Normal
0.4
268
Normal
0.4
873
Tumor
0.4
415
Tumor
0.4
1021
Tumor
0.4
356
Normal
0.4
364
Normal
0.4
223
Tumor
0.4
912
Normal
0.3
1015
Tumor
0.3
1025
Tumor
0.3
162
Normal
0.3
925
Tumor
0.3
172
Normal
0.3
387
Tumor
0.3
817
Tumor
0.3
395
Tumor
0.3
195
Tumor
0.3
171
Tumor
0.3
671
Tumor
0.3
716
Normal
0.3
138
Normal
0.3
1031
Tumor
0.3
861
Tumor
0.3
745
Tumor
0.3
715
Tumor
0.3
574
Normal
0.3
778
Normal
0.3
777
Tumor
0.3
785
Tumor
0.3
354
Normal
0.3
391
Tumor
0.3
262
Normal
0.3
524
Normal
0.3
384
Normal
0.2
698
Normal
0.2
915
Tumor
0.2
823
Tumor
0.2
344
Normal
0.2
148
Normal
0.2
422
Normal
0.2
474
Normal
0.2
881
Tumor
0.2
957
Tumor
0.2
722
Normal
0.2
342
Normal
0.2
545
Tumor
0.2
914
Normal
0.2
358
Normal
0.2
483
Tumor
0.2
481
Tumor
0.2
258
Normal
0.2
192
Normal
0.2
314
Normal
0.2
537
Tumor
0.2
647
Tumor
0.2
628
Normal
0.2
278
Normal
0.2
498
Normal
0.2
867
Tumor
0.2
331
Tumor
0.2
221
Tumor
0.2
568
Normal
0.2
272
Normal
0.2
786
Normal
0.2
188
Normal
0.2
386
Normal
0.2
472
Normal
0.2
557
Tumor
0.2
388
Normal
0.2
211
Tumor
0.2
741
Tumor
0.2
756
Normal
0.2
1013
Tumor
0.2
267
Tumor
0.2
956
Normal
0.2
977
Tumor
0.2
136
Normal
0.2
564
Normal
0.2
955
Tumor
0.2
352
Normal
0.2
484
Normal
0.2
451
Tumor
0.2
455
Tumor
0.2
746
Normal
0.2
128
Normal
0.1
558
Normal
0.1
494
Normal
0.1
572
Normal
0.1
218
Normal
0.1
312
Normal
0.1
217
Tumor
0.1
917
Tumor
0.1
283
Tumor
0.1
868
Normal
0.1
412
Normal
0.1
665
Tumor
0.1
696
Normal
0.1
553
Tumor
0.1
493
Tumor
0.1
332
Normal
0.1
525
Tumor
0.1
488
Normal
0.1
686
Normal
0.1
963
Tumor
0.1
462
Normal
0.1
492
Normal
0.1
261
Tumor
0.1
921
Tumor
0.1
536
Normal
0.1
642
Normal
0.1
714
Normal
0.1
222
Normal
0.1
1016
Normal
0.1
744
Normal
0.1
185
Tumor
0.1
1042
Normal
0.1
285
Tumor
0.1
738
Normal
0.1
328
Normal
0.1
436
Normal
0.1
874
Normal
0.1
284
Normal
0.1
517
Tumor
0.1
636
Normal
0.1
728
Normal
0.1
563
Tumor
0.1
663
Tumor
0.0
257
Tumor
0.0
516
Normal
0.0
1046
Normal
0.0
311
Tumor
0.0
191
Tumor
0.0
425
Tumor
0.0
187
Tumor
0.0
965
Tumor
0.0
298
Normal
0.0
864
Normal
0.0
367
Tumor
0.0
916
Normal
0.0
852
Normal
0.0
161
Tumor
0.0
452
Normal
0.0
1045
Tumor
0.0
385
Tumor
0.0
514
Normal
0.0
863
Tumor
0.0
286
Normal
0.0
913
Tumor
0.0
421
Tumor
0.0
723
Tumor
0.0
464
Normal
0.0
448
Normal
0.0
212
Normal
0.0
618
Normal
0.0
982
Normal
0.0
392
Normal
0.0
467
Tumor
0.0
742
Normal
0.0
487
Tumor
0.0
456
Normal
0.0
526
Normal
0.0
866
Normal
0.0
196
Normal
0.0
1027
Tumor
0.0
922
Normal
0.0
214
Normal
0.0
672
Normal
0.0
277
Tumor
0.0
228
Normal
0.0
213
Tumor
0.0
465
Tumor
0.0
424
Normal
0.0
535
Tumor
0.0
365
Tumor
0.0
426
Normal
0.0
814
Normal
0.0
534
Normal
0.0
538
Normal
0.0
515
Tumor
0.0
227
Tumor
0.0
528
Normal
-0.1
468
Normal
-0.1
396
Normal
-0.1
413
Tumor
-0.1
461
Tumor
-0.1
431
Tumor
-0.1
978
Normal
-0.1
1028
Normal
-0.1
428
Normal
-0.1
816
Normal
-0.1
232
Normal
-0.1
918
Normal
-0.1
447
Tumor
-0.1
423
Tumor
-0.1
224
Normal
-0.1
433
Tumor
-0.1
824
Normal
-0.1
297
Tumor
-0.1
1014
Normal
-0.1
1043
Tumor
-0.1
362
Normal
-0.1
466
Normal
-0.1
862
Normal
-0.1
952
Normal
-0.1
383
Tumor
-0.1
984
Normal
-0.1
376
Normal
-0.1
427
Tumor
-0.1
518
Normal
-0.1
368
Normal
-0.1
355
Tumor
-0.1
394
Normal
-0.1
443
Tumor
-0.1
123
Tumor
-0.1
126
Normal
-0.1
697
Tumor
-0.2
1044
Normal
-0.2
695
Tumor
-0.2
573
Tumor
-0.2
883
Tumor
-0.2
926
Normal
-0.2
366
Normal
-0.2
954
Normal
-0.2
571
Tumor
-0.2
546
Normal
-0.2
353
Tumor
-0.2
924
Normal
-0.2
111
Normal
-0.2
414
Normal
-0.2
1026
Normal
-0.2
944
Normal
-0.2
943
Tumor
-0.2
477
Tumor
-0.2
523
Tumor
-0.2
813
Tumor
-0.2
554
Normal
-0.2
923
Tumor
-0.3
411
Tumor
-0.3
666
Normal
-0.3
147
Tumor
-0.3
444
Normal
-0.3
463
Tumor
-0.3
877
Tumor
-0.3
1022
Normal
-0.3
432
Normal
-0.3
968
Normal
-0.3
858
Normal
-0.3
445
Tumor
-0.3
664
Normal
-0.3
313
Tumor
-0.3
434
Normal
-0.3
1032
Normal
-0.3
818
Normal
-0.3
567
Tumor
-0.3
124
Normal
-0.3
958
Normal
-0.3
983
Tumor
-0.3
938
Normal
-0.3
648
Normal
-0.3
662
Normal
-0.3
361
Tumor
-0.4
114
Normal
-0.4
357
Tumor
-0.4
865
Tumor
-0.4
137
Tumor
-0.4
491
Tumor
-0.4
815
Tumor
-0.4
737
Tumor
-0.4
497
Tumor
-0.4
976
Normal
-0.5
135
Tumor
-0.5
341
Tumor
-0.5
363
Tumor
-0.5
125
Tumor
-0.5
964
Normal
-0.5
966
Normal
-0.5
727
Tumor
-0.5
141
Tumor
-0.5
953
Tumor
-0.5
446
Normal
-0.5
724
Normal
-0.6
743
Tumor
-0.6
113
Tumor
-0.7
351
Tumor
-0.7
435
Tumor
-0.7
343
Tumor
-0.9
661
Tumor
-1.1
112
Tumor
-1.5
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
