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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SEC24A is not prognostic in Colon Adenocarcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
8.4
Number of samples
254
Samples
Sample
Description
TPM
TCGA-A6-6780-01A
0 years, male, white, stage:Stage IIA, alive, 612 days
32.0
TCGA-A6-6781-01A
0 years, male, white, stage:Stage IIIC, alive, 598 days
27.5
TCGA-WS-AB45-01A
0 years, female, black or african american, stage:Stage IIA, alive, 2130 days
24.3
TCGA-A6-2674-01A
0 years, male, white, stage:Stage IV, alive, 1331 days
23.9
TCGA-CM-6162-01A
0 years, female, white, stage:Stage IIIB, alive, 365 days
19.5
TCGA-A6-5656-01A
0 years, male, white, stage:Stage I, alive, 1001 days
18.0
TCGA-A6-6650-01A
0 years, female, black or african american, stage:Stage IIA, alive, 627 days
16.7
TCGA-A6-3809-01A
0 years, female, white, stage:Stage IIB, alive, 996 days
16.6
TCGA-G4-6321-01A
0 years, female, white, stage:Stage III, alive, 672 days
16.4
TCGA-AA-3713-01A
0 years, male, stage:Stage IV, alive, 579 days
16.2
TCGA-G4-6309-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 2600 days
16.1
TCGA-A6-3810-01A
0 years, male, white, stage:Stage IIA, alive, 1111 days
16.1
TCGA-DM-A1HB-01A
0 years, male, white, stage:Stage IIIB, alive, 4126 days
15.0
TCGA-CK-5916-01A
0 years, female, white, stage:Stage I, dead, 643 days
14.5
TCGA-D5-6533-01A
0 years, female, white, stage:'--, alive, 775 days
14.5
TCGA-F4-6856-01A
0 years, male, white, stage:Stage I, alive, 1074 days
14.1
TCGA-A6-5661-01A
0 years, female, black or african american, stage:Stage IIA, alive, 1020 days
13.9
TCGA-CK-5913-01A
0 years, female, white, stage:Stage IIA, alive, 1561 days
13.8
TCGA-F4-6459-01A
0 years, female, white, stage:Stage IIIB, dead, 262 days
13.7
TCGA-AY-6197-01A
0 years, male, white, stage:Stage IIA, alive, 652 days
13.6
TCGA-CM-6171-01A
0 years, female, white, stage:Stage I, alive, 427 days
13.4
TCGA-CA-5254-01A
0 years, female, asian, stage:Stage IIA, alive, 386 days
13.3
TCGA-D5-6920-01A
0 years, female, white, stage:Stage IIA, alive, 377 days
13.1
TCGA-D5-6927-01A
0 years, male, white, stage:Stage IIA, alive, 287 days
13.1
TCGA-AU-6004-01A
0 years, female, white, stage:Stage I, alive, 824 days
12.9
TCGA-AZ-6607-01A
0 years, male, white, stage:Stage IV, dead, 97 days
12.8
TCGA-AY-6386-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 542 days
12.8
TCGA-CM-5861-01A
0 years, female, white, stage:Stage IIA, alive, 457 days
12.8
TCGA-CM-6161-01A
0 years, female, white, stage:Stage I, alive, 457 days
12.7
TCGA-D5-6539-01A
0 years, female, white, stage:'--, alive, 380 days
12.6
TCGA-CM-5348-01A
0 years, male, white, stage:Stage IIIB, alive, 699 days
12.5
TCGA-A6-6138-01A
0 years, male, white, stage:Stage I, alive, 685 days
12.5
TCGA-CM-6172-01A
0 years, female, white, stage:Stage IIIB, alive, 335 days
12.4
TCGA-D5-7000-01A
0 years, female, white, stage:Stage I, alive, 312 days
12.2
TCGA-A6-A565-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 494 days
12.1
TCGA-CM-6168-01A
0 years, female, black or african american, stage:Stage IIA, alive, 395 days
12.1
TCGA-AY-5543-01A
0 years, female, black or african american, stage:Stage IVA, alive, 1004 days
12.0
TCGA-QG-A5Z2-01A
0 years, male, black or african american, stage:Stage I, alive, 952 days
12.0
TCGA-AY-A69D-01A
0 years, female, black or african american, stage:Stage IIA, alive, 543 days
11.9
TCGA-D5-6540-01A
0 years, male, white, stage:Stage I, alive, 491 days
11.9
TCGA-A6-6649-01A
0 years, male, white, stage:Stage IIIB, alive, 735 days
11.8
TCGA-G4-6297-01A
0 years, female, white, stage:Stage IV, alive, 2506 days
11.7
TCGA-A6-6648-01A
0 years, male, white, stage:Stage IVA, alive, 766 days
11.7
TCGA-D5-5538-01A
0 years, female, white, stage:Stage IIIB, dead, 1661 days
11.6
TCGA-G4-6303-01A
0 years, female, white, stage:Stage IV, dead, 2003 days
11.5
TCGA-CA-6717-01A
0 years, male, asian, stage:Stage IIA, alive, 388 days
11.5
TCGA-D5-6898-01A
0 years, female, white, stage:Stage I, alive, 229 days
11.4
TCGA-F4-6703-01A
0 years, male, white, stage:Stage IIA, alive, 1456 days
11.4
TCGA-A6-6140-01A
0 years, male, white, stage:Stage IIA, alive, 734 days
11.3
TCGA-AA-3511-01A
0 years, male, stage:Stage II, alive, 212 days
11.3
TCGA-QL-A97D-01A
0 years, female, black or african american, stage:Stage I, alive, 666 days
11.3
TCGA-F4-6570-01A
0 years, female, white, stage:Stage IIA, dead, 188 days
11.2
TCGA-G4-6588-01A
0 years, female, white, stage:Stage IIA, alive, 796 days
11.1
TCGA-CM-6675-01A
0 years, male, black or african american, stage:Stage IVB, alive, 397 days
11.1
TCGA-SS-A7HO-01A
0 years, female, black or african american, stage:Stage IIB, alive, 1829 days
11.1
TCGA-A6-5664-01A
0 years, male, black or african american, stage:Stage IIIC, alive, 672 days
11.1
TCGA-AD-6895-01A
0 years, male, white, stage:Stage IIIB, alive, 763 days
11.1
TCGA-D5-6931-01A
0 years, male, white, stage:Stage IIIC, alive, 365 days
11.0
TCGA-CM-6165-01A
0 years, male, white, stage:Stage IIA, alive, 488 days
10.9
TCGA-AZ-6598-01A
0 years, female, white, stage:Stage II, dead, 1503 days
10.7
TCGA-D5-6923-01A
0 years, male, white, stage:Stage I, alive, 378 days
10.4
TCGA-AZ-6606-01A
0 years, male, white, stage:Stage IV, dead, 357 days
10.4
TCGA-G4-6627-01A
0 years, male, white, stage:Stage IIA, alive, 2175 days
10.4
TCGA-T9-A92H-01A
0 years, male, black or african american, stage:Stage IIA, alive, 362 days
10.3
TCGA-A6-6653-01A
0 years, male, white, stage:Stage I, alive, 742 days
10.3
TCGA-CA-6718-01A
0 years, male, asian, stage:Stage IIA, dead, 306 days
10.2
TCGA-D5-6928-01A
0 years, male, white, stage:Stage IIA, alive, 354 days
10.2
TCGA-AM-5820-01A
0 years, female, white, stage:Stage IVA, alive, 14 days
10.1
TCGA-AY-6196-01A
0 years, male, white, stage:Stage IIIC, alive, 6 days
10.1
TCGA-A6-A566-01A
0 years, female, black or african american, stage:Stage IIIB, dead, 758 days
10.0
TCGA-DM-A285-01A
0 years, female, white, stage:Stage IV, dead, 179 days
10.0
TCGA-CM-6674-01A
0 years, male, white, stage:Stage IIA, alive, 394 days
9.9
TCGA-D5-6535-01A
0 years, female, white, stage:Stage IIIB, alive, 460 days
9.9
TCGA-D5-6534-01A
0 years, female, white, stage:Stage IIA, alive, 1316 days
9.9
TCGA-AZ-6600-01A
0 years, male, black or african american, stage:Stage IV, dead, 368 days
9.8
TCGA-NH-A6GA-01A
0 years, male, black or african american, stage:Stage IIIC, dead, 302 days
9.8
TCGA-A6-6137-01A
0 years, male, white, stage:Stage IIIB, alive, 824 days
9.7
TCGA-CM-6169-01A
0 years, male, black or african american, stage:Stage IIA, alive, 396 days
9.7
TCGA-CM-6680-01A
0 years, female, white, stage:Stage IIIB, alive, 366 days
9.6
TCGA-CM-5860-01A
0 years, male, white, stage:Stage IIA, alive, 974 days
9.6
TCGA-AD-5900-01A
0 years, male, white, stage:Stage I, alive, 370 days
9.5
TCGA-CM-6167-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 456 days
9.5
TCGA-D5-6924-01A
0 years, male, white, stage:Stage IIA, alive, 435 days
9.4
TCGA-D5-6530-01A
0 years, male, white, stage:Stage I, alive, 621 days
9.4
TCGA-CK-6747-01A
0 years, female, white, stage:Stage IIA, alive, 820 days
9.4
TCGA-CA-6715-01A
0 years, male, asian, stage:Stage IIIB, alive, 383 days
9.3
TCGA-A6-2675-01A
0 years, male, white, stage:Stage IIA, alive, 1321 days
9.3
TCGA-AU-3779-01A
0 years, female, white, stage:Stage IIA, alive, 441 days
9.2
TCGA-AA-3655-01A
0 years, male, stage:Stage II, alive, 1856 days
9.1
TCGA-F4-6807-01A
0 years, female, white, stage:Stage IIIC, alive, 1309 days
9.1
TCGA-AD-6899-01A
0 years, male, white, stage:Stage IIIC, dead, 176 days
9.0
TCGA-F4-6805-01A
0 years, female, white, stage:Stage IIA, alive, 1047 days
9.0
TCGA-CK-6748-01A
0 years, female, white, stage:Stage IV, alive, 61 days
8.9
TCGA-A6-5667-01A
0 years, female, white, stage:Stage IIIB, alive, 887 days
8.9
TCGA-AA-3489-01A
0 years, male, stage:Stage II, dead, 214 days
8.8
TCGA-D5-6536-01A
0 years, male, white, stage:Stage IIA, alive, 543 days
8.8
TCGA-CM-6170-01A
0 years, female, white, stage:Stage I, alive, 457 days
8.7
TCGA-G4-6322-01A
0 years, male, white, stage:Stage IIIB, alive, 792 days
8.7
TCGA-A6-5662-01A
0 years, male, white, stage:Stage IVA, alive, 718 days
8.5
TCGA-CA-6716-01A
0 years, male, asian, stage:Stage IIA, alive, 371 days
8.5
TCGA-CA-5255-01A
0 years, male, asian, stage:Stage IIA, alive, 376 days
8.4
TCGA-D5-6532-01A
0 years, male, white, stage:Stage IIA, alive, 555 days
8.4
TCGA-F4-6854-01A
0 years, female, white, stage:Stage IIA, alive, 16 days
8.3
TCGA-CA-5797-01A
0 years, male, asian, stage:Stage IIA, alive, 383 days
8.3
TCGA-F4-6569-01A
0 years, male, white, stage:Stage I, alive, 1087 days
8.3
TCGA-NH-A50V-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 588 days
8.2
TCGA-CM-4743-01A
0 years, male, white, stage:Stage IIA, alive, 701 days
8.2
TCGA-D5-6529-01A
0 years, male, white, stage:Stage IIA, alive, 614 days
8.2
TCGA-AA-3663-01A
0 years, male, stage:Stage II, alive, 212 days
8.2
TCGA-DM-A28E-01A
0 years, female, white, stage:Stage IIA, alive, 3648 days
8.2
TCGA-D5-6930-01A
0 years, male, white, stage:Stage IIA, alive, 406 days
8.0
TCGA-G4-6294-01A
0 years, male, white, stage:Stage IV, dead, 858 days
8.0
TCGA-D5-6538-01A
0 years, female, white, stage:Stage IIIB, alive, 521 days
8.0
TCGA-G4-6293-01A
0 years, female, white, stage:Stage III, alive, 4051 days
7.9
TCGA-A6-5665-01A
0 years, female, white, stage:Stage IIA, alive, 671 days
7.9
TCGA-A6-A567-01A
0 years, male, black or african american, stage:Stage IV, dead, 1881 days
7.8
TCGA-G4-6315-01A
0 years, male, white, stage:Stage IV, alive, 1883 days
7.8
TCGA-G4-6625-01A
0 years, female, white, stage:Stage IIA, alive, 2792 days
7.8
TCGA-NH-A6GC-01A
0 years, female, black or african american, stage:Stage IVB, alive, 389 days
7.7
TCGA-A6-4105-01A
0 years, male, white, stage:Stage IIA, dead, 442 days
7.7
TCGA-AA-A02K-01A
0 years, male, stage:Stage IV, dead, 426 days
7.6
TCGA-AA-3496-01A
0 years, female, stage:Stage II, alive, 31 days
7.6
TCGA-CK-5912-01A
0 years, male, white, stage:Stage I, dead, 1493 days
7.6
TCGA-CM-6163-01A
0 years, male, white, stage:Stage I, alive, 427 days
7.6
TCGA-CK-6751-01A
0 years, female, white, stage:Stage I, alive, 518 days
7.5
TCGA-3L-AA1B-01A
0 years, female, black or african american, stage:Stage I, alive, 475 days
7.5
TCGA-G4-6311-01A
0 years, male, white, stage:Stage III, alive, 1199 days
7.5
TCGA-CA-6719-01A
0 years, male, asian, stage:Stage IIA, alive, 435 days
7.5
TCGA-AY-A8YK-01A
0 years, male, black or african american, stage:Stage IVA, alive, 573 days
7.5
TCGA-CK-4952-01A
0 years, female, white, stage:Stage IIIC, alive, 475 days
7.5
TCGA-AD-6548-01A
0 years, female, white, stage:Stage I, alive, 650 days
7.5
TCGA-F4-6460-01A
0 years, female, white, stage:Stage IIIB, dead, 972 days
7.5
TCGA-D5-6922-01A
0 years, male, white, stage:Stage IIIA, alive, 308 days
7.5
TCGA-AA-3697-01A
0 years, male, stage:Stage II, alive, 2587 days
7.4
TCGA-D5-5539-01A
0 years, male, white, stage:Stage IIIA, alive, 596 days
7.4
TCGA-F4-6806-01A
0 years, female, white, stage:Stage I, alive, 1260 days
7.4
TCGA-DM-A0XF-01A
0 years, female, white, stage:Stage IIIC, dead, 1162 days
7.4
TCGA-CK-5914-01A
0 years, male, white, stage:Stage IIIB, alive, 669 days
7.3
TCGA-DM-A288-01A
0 years, male, white, stage:Stage IIIC, dead, 427 days
7.3
TCGA-NH-A8F7-01A
0 years, female, black or african american, stage:Stage IIA, alive, 543 days
7.3
TCGA-CM-4751-01A
0 years, male, white, stage:Stage IIIB, alive, 822 days
7.2
TCGA-AZ-6599-01A
0 years, male, white, stage:Stage I, dead, 206 days
7.2
TCGA-NH-A6GB-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 476 days
7.2
TCGA-F4-6461-01A
0 years, female, white, stage:Stage IIIC, dead, 338 days
7.1
TCGA-NH-A8F8-01A
0 years, male, black or african american, stage:Stage IV, dead, 511 days
7.1
TCGA-DM-A280-01A
0 years, female, white, stage:Stage IIA, dead, 236 days
7.1
TCGA-AD-6965-01A
0 years, male, white, stage:Stage IIIC, alive, 805 days
7.1
TCGA-AD-6964-01A
0 years, male, white, stage:'--, dead, 331 days
7.1
TCGA-A6-A56B-01A
0 years, male, black or african american, stage:Stage IIIB, dead, 1711 days
7.1
TCGA-DM-A28F-01A
0 years, male, white, stage:Stage IIIB, dead, 1094 days
7.0
TCGA-G4-6628-01A
0 years, male, white, stage:Stage I, alive, 2424 days
7.0
TCGA-CM-5863-01A
0 years, female, white, stage:Stage IIIB, alive, 457 days
6.9
TCGA-D5-6541-01A
0 years, male, white, stage:Stage IIA, alive, 474 days
6.9
TCGA-A6-6142-01A
0 years, female, white, stage:Stage IVA, alive, 763 days
6.9
TCGA-G4-6586-01A
0 years, female, white, stage:Stage IIA, alive, 1089 days
6.9
TCGA-AZ-6603-01A
0 years, female, white, stage:'--, dead, 899 days
6.8
TCGA-D5-6932-01A
0 years, male, white, stage:Stage IIA, alive, 346 days
6.8
TCGA-AZ-6605-01A
0 years, male, white, stage:Stage IIIB, dead, 159 days
6.8
TCGA-CK-4950-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 2599 days
6.8
TCGA-A6-5657-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 962 days
6.8
TCGA-A6-6651-01A
0 years, female, white, stage:Stage IIIB, alive, 662 days
6.7
TCGA-AZ-6601-01A
0 years, male, white, stage:Stage II, dead, 3042 days
6.7
TCGA-G4-6314-01A
0 years, female, white, stage:Stage IV, alive, 1093 days
6.7
TCGA-A6-6141-01A
0 years, male, black or african american, stage:Stage IIA, alive, 255 days
6.7
TCGA-DM-A1D9-01A
0 years, female, white, stage:Stage IIA, alive, 4270 days
6.6
TCGA-F4-6463-01A
0 years, male, white, stage:Stage IIA, alive, 1087 days
6.6
TCGA-5M-AAT6-01A
0 years, female, black or african american, stage:Stage IV, dead, 290 days
6.5
TCGA-AA-3526-01A
0 years, male, stage:Stage I, alive, 580 days
6.5
TCGA-QG-A5YW-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 896 days
6.5
TCGA-DM-A28M-01A
0 years, male, white, stage:Stage IIA, alive, 2895 days
6.4
TCGA-G4-6299-01A
0 years, male, white, stage:Stage IIIC, alive, 2268 days
6.4
TCGA-AY-A71X-01A
0 years, female, black or african american, stage:Stage I, alive, 588 days
6.4
TCGA-AM-5821-01A
0 years, female, white, stage:Stage IIA, alive, 28 days
6.4
TCGA-D5-6926-01A
0 years, male, white, stage:Stage IIIB, alive, 275 days
6.1
TCGA-AA-3675-01A
0 years, male, stage:Stage II, alive, 1431 days
6.1
TCGA-AZ-5403-01A
0 years, male, white, stage:Stage II, dead, 1910 days
6.1
TCGA-CM-6679-01A
0 years, male, white, stage:Stage IIA, alive, 306 days
6.1
TCGA-AD-6889-01A
0 years, male, asian, stage:Stage IIA, dead, 2532 days
6.1
TCGA-CM-6676-01A
0 years, male, white, stage:Stage I, alive, 337 days
6.0
TCGA-F4-6855-01A
0 years, female, white, stage:Stage IIA, alive, 1442 days
6.0
TCGA-NH-A50U-01A
0 years, male, black or african american, stage:Stage IVA, dead, 334 days
6.0
TCGA-D5-6537-01A
0 years, male, white, stage:Stage IIIB, dead, 146 days
5.9
TCGA-F4-6809-01A
0 years, female, white, stage:Stage IVA, dead, 403 days
5.8
TCGA-QG-A5Z1-01A
0 years, male, black or african american, stage:Stage IIIB, dead, 256 days
5.8
TCGA-G4-6310-01A
0 years, male, white, stage:Stage IIIB, alive, 1935 days
5.8
TCGA-DM-A1D7-01A
0 years, male, white, stage:Stage IIA, dead, 405 days
5.8
TCGA-AY-A54L-01A
0 years, female, black or african american, stage:Stage I, alive, 525 days
5.8
TCGA-AZ-4323-01A
0 years, male, white, stage:Stage IV, dead, 43 days
5.8
TCGA-AZ-5407-01A
0 years, female, white, stage:Stage I, alive, 2683 days
5.7
TCGA-G4-6626-01A
0 years, male, white, stage:Stage IIA, dead, 1 days
5.7
TCGA-A6-5666-01A
0 years, male, white, stage:Stage IIC, alive, 995 days
5.7
TCGA-AA-A02Y-01A
0 years, male, stage:Stage I, alive, 1216 days
5.6
TCGA-DM-A1D6-01A
0 years, male, white, stage:Stage IIA, dead, 570 days
5.6
TCGA-QG-A5YV-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 1301 days
5.6
TCGA-DM-A28C-01A
0 years, male, white, stage:Stage IIA, dead, 2475 days
5.6
TCGA-AA-3662-01A
0 years, female, stage:Stage IV, alive, 184 days
5.6
TCGA-CM-6677-01A
0 years, female, white, stage:Stage IIA, alive, 337 days
5.6
TCGA-A6-6782-01A
0 years, male, white, stage:Stage IIB, alive, 617 days
5.6
TCGA-AD-A5EK-01A
0 years, male, black or african american, stage:Stage I, alive, 500 days
5.5
TCGA-5M-AATE-01A
0 years, male, black or african american, stage:Stage IIA, alive, 1200 days
5.5
TCGA-A6-6652-01A
0 years, male, black or african american, stage:Stage IVA, alive, 751 days
5.5
TCGA-4T-AA8H-01A
0 years, female, black or african american, stage:Stage IIA, alive, 385 days
5.5
TCGA-D5-5537-01A
0 years, male, white, stage:'--, dead, 1381 days
5.5
TCGA-AA-3660-01A
0 years, female, stage:Stage II, alive, 2375 days
5.4
TCGA-CM-5868-01A
0 years, female, white, stage:Stage IVA, alive, 518 days
5.4
TCGA-DM-A1D8-01A
0 years, female, white, stage:'--, dead, 383 days
5.4
TCGA-F4-6704-01A
0 years, male, american indian or alaska native, stage:Stage IIIC, alive, 47 days
5.4
TCGA-CM-5349-01A
0 years, female, white, stage:Stage IIA, alive, 915 days
5.4
TCGA-A6-6654-01A
0 years, female, white, stage:Stage IIIB, alive, 726 days
5.3
TCGA-G4-6295-01A
0 years, female, white, stage:Stage II, alive, 254 days
5.3
TCGA-D5-6531-01A
0 years, male, white, stage:Stage IIA, alive, 540 days
5.3
TCGA-G4-6306-01A
0 years, male, white, stage:'--, alive, 1359 days
5.3
TCGA-AD-6890-01A
0 years, male, white, stage:'--, alive, 746 days
5.2
TCGA-A6-A5ZU-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 293 days
5.2
TCGA-CM-6678-01A
0 years, female, white, stage:Stage IVA, alive, 335 days
5.2
TCGA-AD-6963-01A
0 years, male, white, stage:'--, alive, 834 days
5.2
TCGA-DM-A28A-01A
0 years, male, white, stage:Stage IIIC, dead, 805 days
5.1
TCGA-A6-2686-01A
0 years, female, white, stage:Stage IIA, dead, 1126 days
5.1
TCGA-QG-A5YX-01A
0 years, female, black or african american, stage:Stage IIA, alive, 1003 days
5.1
TCGA-A6-5659-01A
0 years, male, white, stage:Stage I, alive, 926 days
5.0
TCGA-CM-6166-01A
0 years, female, white, stage:Stage I, alive, 669 days
5.0
TCGA-G4-6323-01A
0 years, male, black or african american, stage:Stage IA, alive, 419 days
4.9
TCGA-DM-A0X9-01A
0 years, female, white, stage:Stage IIA, alive, 3641 days
4.9
TCGA-A6-5660-01A
0 years, male, black or african american, stage:Stage IIIC, alive, 888 days
4.8
TCGA-AD-6901-01A
0 years, male, white, stage:'--, dead, 682 days
4.8
TCGA-CM-6164-01A
0 years, female, white, stage:Stage IIA, alive, 883 days
4.8
TCGA-D5-6929-01A
0 years, female, white, stage:Stage IV, alive, 408 days
4.8
TCGA-DM-A1D0-01A
0 years, female, white, stage:Stage IIA, alive, 3974 days
4.6
TCGA-DM-A1DA-01A
0 years, female, white, stage:Stage IIIC, dead, 228 days
4.5
TCGA-AZ-6608-01A
0 years, female, white, stage:Stage IIIA, dead, 59 days
4.5
TCGA-5M-AAT4-01A
0 years, male, black or african american, stage:Stage IV, dead, 49 days
4.4
TCGA-DM-A1D4-01A
0 years, male, white, stage:Stage IIA, dead, 2821 days
4.4
TCGA-DM-A28G-01A
0 years, male, white, stage:Stage IIA, dead, 1849 days
4.4
TCGA-CM-5862-01A
0 years, male, white, stage:Stage IVA, dead, 153 days
4.4
TCGA-AD-6888-01A
0 years, male, white, stage:Stage IIIB, dead, 472 days
4.3
TCGA-CM-5344-01A
0 years, female, white, stage:Stage IIIB, alive, 670 days
4.2
TCGA-4N-A93T-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 146 days
4.2
TCGA-AA-3685-01A
0 years, male, stage:Stage II, alive, 1127 days
4.1
TCGA-G4-6320-01A
0 years, male, white, stage:Stage III, alive, 804 days
4.0
TCGA-DM-A282-01A
0 years, female, white, stage:Stage IIA, alive, 4233 days
4.0
TCGA-DM-A28H-01A
0 years, male, white, stage:Stage IIIC, alive, 3561 days
3.9
TCGA-G4-6304-01A
0 years, female, white, stage:Stage IIB, alive, 1631 days
3.9
TCGA-AZ-4616-01A
0 years, female, white, stage:Stage IV, dead, 156 days
3.9
TCGA-NH-A50T-01A
0 years, female, black or african american, stage:Stage IIA, alive, 553 days
3.8
TCGA-CM-5864-01A
0 years, male, white, stage:Stage I, alive, 457 days
3.8
TCGA-DM-A1DB-01A
0 years, male, white, stage:Stage IIA, dead, 1348 days
3.8
TCGA-DM-A1HA-01A
0 years, male, white, stage:Stage IIIC, alive, 2600 days
3.6
TCGA-RU-A8FL-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 1177 days
3.5
TCGA-DM-A28K-01A
0 years, male, white, stage:Stage IIA, alive, 2988 days
3.5
TCGA-F4-6808-01A
0 years, female, white, stage:Stage I, alive, 1024 days
3.2
TCGA-CM-4744-01A
0 years, male, white, stage:Stage I, alive, 609 days
2.9
TCGA-G4-6317-01A
0 years, female, white, stage:Stage IIIC, alive, 1095 days
2.8
TCGA-DM-A0XD-01A
0 years, male, white, stage:Stage IIA, dead, 743 days
2.5
TCGA-G4-6307-01A
0 years, female, white, stage:Stage IIIB, alive, 1674 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SEC24A is not prognostic in Colon Adenocarcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
29.2
Number of samples
486
Samples
Sample
Description
TPM
U0239
0 years, male, NA, stage:T2N0M0, alive, 67 days
54.5
U0464
0 years, male, NA, stage:T3N0M0, alive, 918 days
51.7
U0073
0 years, male, NA, stage:T4N0MX, dead, 318 days
50.5
U2935
0 years, male, NA, stage:T4N1M0, alive, 555 days
49.6
U0370
0 years, female, NA, stage:T3N0M0, alive, 1047 days
48.6
U1150
0 years, female, NA, stage:T3N0M0, alive, 15 days
48.2
U0987
0 years, female, NA, stage:T3N0M0, alive, 2482 days
47.5
U0087
0 years, female, NA, stage:T3N2M0, dead, 337 days
47.4
U0317
0 years, female, NA, stage:T3N2M0, alive, 3209 days
47.3
U1291
0 years, female, NA, stage:T3N0M0, alive, 2000 days
47.2
U1032
0 years, male, NA, stage:T3N1M0, alive, 2113 days
46.5
U1102
0 years, male, NA, stage:T2N0M0, alive, 1354 days
46.3
U0308
0 years, male, NA, stage:T4N1M0, alive, 1075 days
45.6
U0473
0 years, male, NA, stage:T3N1M0, alive, 786 days
45.1
U1235
0 years, female, NA, stage:T2N0M0, alive, 1319 days
44.3
U1436
0 years, female, NA, stage:T3N0M0, alive, 1745 days
44.0
U0221
0 years, male, NA, stage:T3N0M0, alive, 569 days
44.0
U3025
0 years, male, NA, stage:T4N2M1, alive, 377 days
43.9
U1104
0 years, female, NA, stage:T4N0M0, alive, 1109 days
43.8
U0256
0 years, male, NA, stage:T3N0M0, alive, 738 days
43.7
U0105
0 years, female, NA, stage:T2N0M0, dead, 2158 days
43.1
U0955
0 years, female, NA, stage:T3N0M0, alive, 2170 days
43.0
U0235
0 years, female, NA, stage:T3N0M0, alive, 1327 days
42.9
U1114
0 years, female, NA, stage:TXNXM1, dead, 473 days
42.9
U1007
0 years, male, NA, stage:T3N0M0, alive, 1333 days
42.8
U1213
0 years, female, NA, stage:T2N0M0, alive, 560 days
42.5
U0198
0 years, male, NA, stage:T3N1M0, alive, 1272 days
42.4
U0208
0 years, female, NA, stage:T3N1M0, dead, 1233 days
42.2
U3008
0 years, female, NA, stage:T2N0M0, alive, 473 days
42.2
U0447
0 years, male, NA, stage:T4N1M0, dead, 1819 days
42.1
U0091
0 years, male, NA, stage:T3N0M0, alive, 520 days
42.0
U0078
0 years, female, NA, stage:T3N0M0, alive, 1183 days
41.9
U3043
0 years, female, NA, stage:T3N2M0, alive, 287 days
41.9
U1045
0 years, female, NA, stage:T4N2M0, alive, 1239 days
41.8
U1069
0 years, female, NA, stage:T3N0M0, dead, 2187 days
41.3
U0266
0 years, female, NA, stage:T3N1M0, dead, 2221 days
41.3
U0445
0 years, female, NA, stage:T3N0M0, alive, 1851 days
40.9
U0448
0 years, male, NA, stage:T3N2M0, alive, 3615 days
40.8
U1228
0 years, male, NA, stage:T3N0M0, alive, 1333 days
40.7
U0215
0 years, male, NA, stage:T3N0M0, alive, 1269 days
40.6
U0162
0 years, female, NA, stage:T3N0M0, alive, 1488 days
40.3
U0319
0 years, male, NA, stage:T3N0M0, alive, 2801 days
40.3
U0106
0 years, female, NA, stage:T3N1M0, dead, 653 days
40.2
U2843
0 years, female, NA, stage:T3N0M0, alive, 674 days
40.2
U0474
0 years, male, NA, stage:T3N1M0, alive, 1017 days
40.1
U1065
0 years, female, NA, stage:T3N2M0, alive, 2954 days
39.7
U0976
0 years, female, NA, stage:T3N2M0, dead, 97 days
39.6
U0133
0 years, female, NA, stage:T3N0M0, alive, 773 days
39.5
U1432
0 years, female, NA, stage:T3N1M0, alive, 577 days
39.5
U1047
0 years, female, NA, stage:T4N2M0, alive, 3592 days
39.5
U0898
0 years, female, NA, stage:T4aN0M0, dead, 340 days
39.5
U1188
0 years, female, NA, stage:T3N0M0, dead, 967 days
39.1
U0590
0 years, female, NA, stage:T3N0M0, alive, 661 days
39.0
U0420
0 years, male, NA, stage:T4N1M1, alive, 417 days
39.0
U0103
0 years, female, NA, stage:T3N1M0, alive, 1197 days
38.8
U0421
0 years, male, NA, stage:T3N1M0, alive, 674 days
38.8
U1483
0 years, female, NA, stage:T3N0M0, alive, 1094 days
38.7
U0915
0 years, female, NA, stage:T3N0M0, alive, 1613 days
38.7
U0104
0 years, female, NA, stage:T4N0M0, dead, 1639 days
38.5
U0112
0 years, female, NA, stage:T3N0M1, alive, 551 days
38.3
U2971
0 years, male, NA, stage:T4aN0M0, alive, 629 days
38.3
U1343
0 years, female, NA, stage:T4N2M0, alive, 3178 days
38.1
U2948
0 years, female, NA, stage:T3N1M0, alive, 543 days
38.0
U0323
0 years, male, NA, stage:T2N0M0, dead, 1016 days
38.0
U0589
0 years, female, NA, stage:T3N0M0, alive, 1176 days
37.9
U0204
0 years, male, NA, stage:T3N0M0, dead, 770 days
37.6
U3122
0 years, female, NA, stage:T3N0M1, dead, 91 days
37.6
U1099
0 years, female, NA, stage:T3N0M0, alive, 2068 days
37.5
U0460
0 years, female, NA, stage:T3N0M0, dead, 2069 days
37.4
U1141
0 years, female, NA, stage:T4N1M1, dead, 596 days
37.4
U1321
0 years, male, NA, stage:T3N1M0, alive, 2578 days
37.2
U0069
0 years, female, NA, stage:T4N2M0, dead, 135 days
37.2
U1292
0 years, female, NA, stage:T4N1M0, alive, 1147 days
37.1
U1013
0 years, female, NA, stage:T2N1M0, alive, 1439 days
37.0
U0378
0 years, female, NA, stage:T4N1M0, dead, 815 days
36.9
U0250
0 years, female, NA, stage:T4N0M0, dead, 906 days
36.9
U0394
0 years, male, NA, stage:T2N1M0, alive, 969 days
36.8
U0949
0 years, female, NA, stage:T3N0M1, dead, 594 days
36.8
U0348
0 years, female, NA, stage:T3N0M0, alive, 533 days
36.7
U0240
0 years, female, NA, stage:T3N1M0, dead, 800 days
36.7
U1184
0 years, male, NA, stage:T4N1M0, alive, 290 days
36.5
U0444
0 years, female, NA, stage:T4N1M0, alive, 1841 days
36.4
U0307
0 years, male, NA, stage:T3N0M0, alive, 2921 days
36.4
U0169
0 years, male, NA, stage:T4N2M0, alive, 616 days
36.3
U2774
0 years, female, NA, stage:T3N0M0, alive, 783 days
36.2
U0303
0 years, female, NA, stage:T3N0M0, alive, 2847 days
36.1
U1327
0 years, female, NA, stage:T3N0M0, alive, 1613 days
36.1
U0072
0 years, male, NA, stage:T3N0M0, alive, 2772 days
36.1
U0183
0 years, male, NA, stage:T3N1M1, dead, 2957 days
36.0
U0472
0 years, male, NA, stage:TXN2M0, alive, 542 days
36.0
U0092
0 years, male, NA, stage:T3N0M0, alive, 2779 days
36.0
U0321
0 years, female, NA, stage:T3N0M0, alive, 1029 days
36.0
U0318
0 years, male, NA, stage:T3N0M0, alive, 762 days
35.9
U0350
0 years, female, NA, stage:T4N0M0, alive, 770 days
35.7
U0099
0 years, female, NA, stage:T3N0M0, dead, 986 days
35.6
U1060
0 years, male, NA, stage:T3N0M0, alive, 2442 days
35.5
U0443
0 years, male, NA, stage:T3N0M0, alive, 1677 days
35.5
U3030
0 years, female, NA, stage:T3N0M0, alive, 380 days
35.4
U0424
0 years, male, NA, stage:T3N0M0, alive, 2192 days
35.3
U0151
0 years, female, NA, stage:T3N0M0, alive, 2014 days
35.3
U0196
0 years, male, NA, stage:T3N0M0, alive, 2086 days
35.2
U0365
0 years, female, NA, stage:T4N1M0, dead, 313 days
35.2
U0186
0 years, female, NA, stage:T2N0M0, alive, 3726 days
34.9
U0231
0 years, female, NA, stage:T2N0M0, alive, 991 days
34.9
U0214
0 years, male, NA, stage:T4N1M1, alive, 788 days
34.8
U1041
0 years, male, NA, stage:T2N0M0, alive, 1108 days
34.8
U0075
0 years, male, NA, stage:T3N0M0, dead, 3 days
34.8
U0082
0 years, female, NA, stage:T3N1M0, dead, 2339 days
34.8
U0067
0 years, female, NA, stage:T3N0M0, alive, 2180 days
34.6
U0253
0 years, female, NA, stage:T3N0M0, alive, 958 days
34.6
U0340
0 years, female, NA, stage:T4N2M1, dead, 438 days
34.4
U0182
0 years, female, NA, stage:T4N1M0, dead, 260 days
34.2
U0156
0 years, female, NA, stage:T4N1M0, alive, 1573 days
34.1
U0115
0 years, female, NA, stage:T3N0M0, dead, 1738 days
34.1
U1017
0 years, male, NA, stage:T3N0M0, alive, 615 days
34.1
U0267
0 years, male, NA, stage:T4N0M0, dead, 445 days
34.1
U2803
0 years, male, NA, stage:T3N1M0, alive, 744 days
34.0
U0327
0 years, male, NA, stage:T4N0M0, alive, 833 days
34.0
U0189
0 years, female, NA, stage:T3N0M0, dead, 1823 days
33.9
U0939
0 years, male, NA, stage:T3N1M0, alive, 2960 days
33.9
U1346
0 years, female, NA, stage:T3N0M0, alive, 1137 days
33.8
U0123
0 years, male, NA, stage:T3N0M0, dead, 1880 days
33.7
U0398
0 years, female, NA, stage:T3N0M0, alive, 721 days
33.7
U1122
0 years, female, NA, stage:T3N2M0, alive, 1675 days
33.7
U2927
0 years, male, NA, stage:T3N1M0, alive, 564 days
33.6
U0121
0 years, male, NA, stage:T4N2M0, alive, 655 days
33.6
U1075
0 years, female, NA, stage:T3N0M0, alive, 1290 days
33.5
U3037
0 years, male, NA, stage:T3N1M0, alive, 405 days
33.5
U0181
0 years, female, NA, stage:T1N0M0, alive, 3623 days
33.4
U1078
0 years, female, NA, stage:T3N0M0, alive, 1016 days
33.4
U1147
0 years, male, NA, stage:T3N0M0, dead, 282 days
33.3
U0224
0 years, female, NA, stage:T3N0M0, alive, 2367 days
33.3
U0463
0 years, male, NA, stage:T3N0M0, alive, 946 days
33.2
U0408
0 years, female, NA, stage:T4N0M0, dead, 2100 days
33.2
U3034
0 years, female, NA, stage:T3N1M0, alive, 443 days
33.2
U0122
0 years, female, NA, stage:T2N0M0, dead, 159 days
33.2
U2882
0 years, female, NA, stage:T3N1M0, alive, 637 days
33.2
U0207
0 years, female, NA, stage:T3N0M0, dead, 2593 days
33.2
U1018
0 years, male, NA, stage:T4N1M1, dead, 1693 days
33.1
U0342
0 years, male, NA, stage:T4N2M0, alive, 305 days
33.1
U1447
0 years, male, NA, stage:T4N1M0, alive, 988 days
33.1
U1034
0 years, male, NA, stage:T4N0M0, alive, 1575 days
33.0
U1212
0 years, female, NA, stage:T2N0M0, alive, 69 days
33.0
U0203
0 years, male, NA, stage:T3N0M0, dead, 827 days
32.9
U2753
0 years, female, NA, stage:T2N0M0, alive, 813 days
32.8
U0292
0 years, male, NA, stage:T4N1M0, alive, 1666 days
32.8
U0938
0 years, female, NA, stage:T3N0M0, dead, 1231 days
32.8
U0146
0 years, female, NA, stage:T3N2M0, dead, 733 days
32.7
U0435
0 years, female, NA, stage:T2N0M0, alive, 3616 days
32.5
U1486
0 years, female, NA, stage:T4N0M0, alive, 1606 days
32.4
U0439
0 years, male, NA, stage:T3N1M0, alive, 1418 days
32.4
U0455
0 years, female, NA, stage:T3N2M0, alive, 2445 days
32.4
U0270
0 years, female, NA, stage:T1N0M0, alive, 2187 days
32.3
U1396
0 years, female, NA, stage:T4N0M0, alive, 1168 days
32.3
U2959
0 years, male, NA, stage:T3N2M0, alive, 536 days
32.2
U1252
0 years, female, NA, stage:T4N2M0, alive, 1309 days
32.2
U0467
0 years, female, NA, stage:T3N0M0, alive, 1848 days
32.1
U0211
0 years, female, NA, stage:T3N1M0, alive, 1236 days
32.0
U0161
0 years, male, NA, stage:T4N2M1, alive, 42 days
31.8
U0179
0 years, male, NA, stage:T3N1M0, dead, 1043 days
31.7
U0289
0 years, female, NA, stage:T3N0M0, alive, 3511 days
31.7
U0165
0 years, female, NA, stage:T2N0M0, alive, 1702 days
31.6
U0377
0 years, female, NA, stage:T3N2M0, alive, 3720 days
31.6
U0269
0 years, female, NA, stage:T3N0M0, alive, 2530 days
31.5
U0252
0 years, male, NA, stage:T3N1M0, dead, 1761 days
31.5
U1158
0 years, female, NA, stage:T3N1M0, alive, 721 days
31.4
U0170
0 years, male, NA, stage:T4N1M0, dead, 832 days
31.4
U0386
0 years, female, NA, stage:T4N1M1, alive, 2592 days
31.3
U0110
0 years, female, NA, stage:T3N1M1, dead, 878 days
31.2
U2942
0 years, male, NA, stage:T2N0M0, alive, 549 days
31.2
U0411
0 years, female, NA, stage:T3N1M0, alive, 1868 days
31.2
U0335
0 years, female, NA, stage:T3N1M0, alive, 2464 days
31.2
U0397
0 years, male, NA, stage:T4N0M0, alive, 1663 days
31.2
U1239
0 years, male, NA, stage:T2N0M0, dead, 1998 days
31.1
U2902
0 years, female, NA, stage:T2N0M0, alive, 596 days
31.1
U0399
0 years, female, NA, stage:T4N2M0, dead, 547 days
31.1
U1301
0 years, female, NA, stage:T4N2M0, dead, 877 days
31.1
U0268
0 years, male, NA, stage:T3N0M0, alive, 2978 days
31.1
U0429
0 years, female, NA, stage:T3N0M1, alive, 1099 days
31.1
U0249
0 years, female, NA, stage:T4N2M0, dead, 874 days
31.0
U3032
0 years, female, NA, stage:T3N1M0, alive, 449 days
31.0
U1386
0 years, male, NA, stage:T3N1M0, alive, 1518 days
30.9
U1429
0 years, female, NA, stage:T3N0M0, alive, 1660 days
30.9
U1251
0 years, male, NA, stage:T4N2M0, alive, 126 days
30.6
U1421
0 years, female, NA, stage:T3N1M0, alive, 1905 days
30.6
U0403
0 years, male, NA, stage:T3N1M1, dead, 1809 days
30.5
U2891
0 years, male, NA, stage:T3N1M0, alive, 619 days
30.4
U2815
0 years, female, NA, stage:T3N0M0, alive, 717 days
30.3
U2999
0 years, female, NA, stage:T2N0M0, alive, 581 days
30.3
U0361
0 years, male, NA, stage:T3N0M0, alive, 686 days
30.3
U0102
0 years, female, NA, stage:T4N2M0, dead, 670 days
30.2
U0259
0 years, female, NA, stage:T4N2M0, alive, 76 days
30.2
U0433
0 years, male, NA, stage:T4N1M1, dead, 440 days
30.2
U0227
0 years, female, NA, stage:T4N2M0, alive, 291 days
30.1
U1022
0 years, male, NA, stage:T4N2M0, dead, 61 days
30.1
U0355
0 years, male, NA, stage:T4N1M0, dead, 1038 days
30.1
U0362
0 years, male, NA, stage:T3N0M0, alive, 1148 days
30.0
U2896
0 years, female, NA, stage:T3N1M0, alive, 609 days
30.0
U0396
0 years, male, NA, stage:T4N2M0, alive, 2243 days
29.9
U0063
0 years, male, NA, stage:T1N0M0, dead, 1779 days
29.8
U0274
0 years, male, NA, stage:T3N0M0, dead, 1570 days
29.8
U2747
0 years, female, NA, stage:T4N1M0, dead, 54 days
29.6
U1392
0 years, male, NA, stage:T3N0M0, alive, 1513 days
29.6
U0345
0 years, female, NA, stage:T3N0M0, alive, 2127 days
29.6
U0427
0 years, male, NA, stage:T2N0M0, alive, 1193 days
29.6
U0142
0 years, female, NA, stage:T4N1M0, alive, 2340 days
29.5
U1095
0 years, female, NA, stage:T3N1M1, alive, 2425 days
29.5
U1349
0 years, female, NA, stage:T3N1M0, alive, 1899 days
29.4
U0376
0 years, male, NA, stage:T2N1M0, alive, 965 days
29.4
U0281
0 years, male, NA, stage:T3N2M0, alive, 933 days
29.4
U0344
0 years, male, NA, stage:T2N1M0, dead, 818 days
29.4
U2837
0 years, female, NA, stage:T4N1M0, alive, 681 days
29.3
U0389
0 years, female, NA, stage:T3N1M0, dead, 927 days
29.0
U0090
0 years, female, NA, stage:T3N0M0, dead, 1258 days
29.0
U0465
0 years, male, NA, stage:T3N0M0, alive, 2383 days
29.0
U2861
0 years, male, NA, stage:T3N0M0, alive, 652 days
28.9
U1446
0 years, female, NA, stage:T3N0M0, alive, 2314 days
28.9
U0453
0 years, male, NA, stage:T3N0M0, alive, 2859 days
28.9
U0149
0 years, female, NA, stage:T3N2M0, alive, 1715 days
28.8
U1086
0 years, female, NA, stage:T1N0M0, alive, 2907 days
28.8
U0360
0 years, female, NA, stage:T3N0M0, dead, 1016 days
28.8
U2856
0 years, female, NA, stage:T4N1M1, alive, 660 days
28.8
U2782
0 years, male, NA, stage:T3N1M1, alive, 773 days
28.8
U2842
0 years, female, NA, stage:T4N2M0, alive, 675 days
28.7
U2975
0 years, male, NA, stage:T4N1M0, alive, 514 days
28.7
U0131
0 years, female, NA, stage:T4N2M1, alive, 238 days
28.7
U0095
0 years, male, NA, stage:T4N1M0, dead, 1034 days
28.7
U1454
0 years, female, NA, stage:T3N0M0, alive, 393 days
28.6
U0933
0 years, male, NA, stage:T3N2M0, dead, 1960 days
28.6
U0332
0 years, female, NA, stage:T3N0M0, alive, 2101 days
28.5
U1448
0 years, male, NA, stage:T3N0M1, dead, 1512 days
28.5
U0387
0 years, male, NA, stage:T2N0M0, alive, 1327 days
28.5
U0297
0 years, female, NA, stage:T3N2M0, alive, 1196 days
28.5
U0358
0 years, female, NA, stage:T4N1M0, alive, 2290 days
28.5
U0440
0 years, female, NA, stage:T4N0M0, dead, 2743 days
28.5
U3024
0 years, female, NA, stage:T3N0M0, alive, 463 days
28.4
U0126
0 years, male, NA, stage:T3N0M0, dead, 2876 days
28.4
U0991
0 years, male, NA, stage:T4N2M0, dead, 534 days
28.4
U0984
0 years, female, NA, stage:T4N0M0, alive, 1287 days
28.4
U2964
0 years, male, NA, stage:T3N1M0, alive, 637 days
28.3
U1332
0 years, male, NA, stage:T3N0M0, alive, 1672 days
28.2
U0163
0 years, male, NA, stage:T4N0M0, alive, 697 days
28.2
U1155
0 years, male, NA, stage:T4N1M0, alive, 1815 days
28.2
U0312
0 years, female, NA, stage:T4N2M1, alive, 499 days
28.2
U0352
0 years, female, NA, stage:T4N2M0, dead, 385 days
28.2
U0966
0 years, male, NA, stage:T4N0M0, dead, 1513 days
28.1
U1071
0 years, female, NA, stage:T4N0M1, alive, 1514 days
28.1
U0260
0 years, male, NA, stage:T1N0M1, alive, 2928 days
28.1
U1103
0 years, female, NA, stage:T4N2M0, alive, 975 days
28.0
U0315
0 years, female, NA, stage:T2N0M0, alive, 1973 days
28.0
U2780
0 years, male, NA, stage:T3N0M0, alive, 778 days
28.0
U0436
0 years, male, NA, stage:T4N1M1, alive, 960 days
28.0
U3050
0 years, female, NA, stage:T3N0M0, alive, 407 days
27.9
U0152
0 years, male, NA, stage:T3N1M0, alive, 989 days
27.9
U3039
0 years, male, NA, stage:T4N1M1, dead, 366 days
27.9
U1160
0 years, male, NA, stage:T3N1M0, alive, 1557 days
27.9
U0309
0 years, female, NA, stage:T3N0M0, dead, 1898 days
27.8
U0222
0 years, female, NA, stage:T3N2M1, alive, 1779 days
27.8
U1253
0 years, female, NA, stage:T3N0M0, dead, 165 days
27.7
U1037
0 years, male, NA, stage:T4N0M0, alive, 1658 days
27.7
U1130
0 years, male, NA, stage:T2N1M0, alive, 913 days
27.6
U0469
0 years, male, NA, stage:T3N0M0, dead, 409 days
27.6
U1258
0 years, male, NA, stage:T3N1M0, alive, 1373 days
27.6
U0316
0 years, male, NA, stage:T3N2M0, alive, 2012 days
27.6
U0275
0 years, female, NA, stage:T3N2M0, alive, 549 days
27.6
U2792
0 years, male, NA, stage:T2N1M0, alive, 758 days
27.6
U3042
0 years, male, NA, stage:T3N0M0, alive, 324 days
27.5
U0338
0 years, female, NA, stage:T3N0M0, alive, 1016 days
27.4
U0185
0 years, male, NA, stage:T1N0M0, alive, 1248 days
27.4
U0392
0 years, male, NA, stage:T3N2M0, alive, 489 days
27.4
U0195
0 years, male, NA, stage:T3N0M0, alive, 3326 days
27.4
U2928
0 years, male, NA, stage:T2N0M0, alive, 563 days
27.3
U3022
0 years, male, NA, stage:T2N0M0, alive, 484 days
27.3
U3051
0 years, male, NA, stage:T3N2M0, alive, 415 days
27.2
U0428
0 years, male, NA, stage:T4N1M1, alive, 1016 days
27.1
U0382
0 years, female, NA, stage:T3N0M0, alive, 2550 days
27.1
U0336
0 years, female, NA, stage:T3N0M0, alive, 1100 days
27.0
U0187
0 years, male, NA, stage:T3N2M0, alive, 1632 days
27.0
U2798
0 years, male, NA, stage:T3N0M0, alive, 751 days
27.0
U0119
0 years, female, NA, stage:T3N0M0, alive, 3259 days
27.0
U3100
0 years, male, NA, stage:T3N1M0, dead, 1608 days
26.9
U0081
0 years, male, NA, stage:T3N2M0, dead, 248 days
26.9
U0223
0 years, male, NA, stage:T4N1M0, alive, 1812 days
26.9
U1094
0 years, female, NA, stage:T4N1M0, alive, 1267 days
26.8
U0438
0 years, female, NA, stage:T3N0M0, alive, 2009 days
26.8
U0134
0 years, male, NA, stage:T3N0M0, alive, 2009 days
26.8
U0101
0 years, male, NA, stage:T3N1M1, alive, 1878 days
26.8
U1474
0 years, female, NA, stage:T1N0MX, alive, 2012 days
26.8
U2981
0 years, male, NA, stage:T3N0M0, alive, 508 days
26.8
U0217
0 years, female, NA, stage:T3N0M0, dead, 538 days
26.8
U0094
0 years, female, NA, stage:T3N2M0, alive, 741 days
26.7
U3000
0 years, female, NA, stage:T3N0M0, alive, 584 days
26.7
U1044
0 years, male, NA, stage:T4N0M0, alive, 3146 days
26.6
U0209
0 years, male, NA, stage:T3N1M0, alive, 2109 days
26.6
U0977
0 years, female, NA, stage:T4N2M0, dead, 140 days
26.5
U0277
0 years, male, NA, stage:T2N1M0, alive, 270 days
26.5
U0950
0 years, female, NA, stage:T4N1M0, alive, 1834 days
26.5
U0942
0 years, male, NA, stage:T3N0M0, alive, 665 days
26.5
U0972
0 years, female, NA, stage:T1N0M0, alive, 2473 days
26.4
U0384
0 years, male, NA, stage:T2N1M1, alive, 1024 days
26.4
U1240
0 years, male, NA, stage:T4N0M0, alive, 765 days
26.3
U0450
0 years, female, NA, stage:T3N1M0, alive, 763 days
26.3
U0176
0 years, male, NA, stage:T3N1M0, alive, 2600 days
26.2
U0136
0 years, female, NA, stage:T3N0M0, dead, 2795 days
26.2
U1304
0 years, female, NA, stage:TXNXM0, alive, 1081 days
26.2
U0929
0 years, male, NA, stage:T4N1M0, alive, 436 days
26.2
U0247
0 years, female, NA, stage:T3N1M0, alive, 2538 days
26.1
U2956
0 years, female, NA, stage:T3N0M0, alive, 540 days
26.1
U2958
0 years, female, NA, stage:T1N0M0, alive, 536 days
26.1
U1374
0 years, male, NA, stage:T4N0M0, alive, 827 days
26.1
U0257
0 years, male, NA, stage:T3N1M0, dead, 2508 days
26.0
U0083
0 years, male, NA, stage:T4N0M0, dead, 731 days
26.0
U1274
0 years, male, NA, stage:T2N1M0, alive, 1198 days
25.9
U1347
0 years, female, NA, stage:T3N0M0, alive, 1401 days
25.9
U0066
0 years, male, NA, stage:T3N0M0, dead, 2486 days
25.8
U1267
0 years, male, NA, stage:T3N1M0, dead, 2869 days
25.7
U0328
0 years, male, NA, stage:T4N0M0, dead, 1362 days
25.7
U1208
0 years, female, NA, stage:T1N0M0, alive, 834 days
25.7
U0107
0 years, male, NA, stage:T3N0M0, dead, 2354 days
25.7
U0145
0 years, male, NA, stage:T3N1M1, alive, 623 days
25.7
U0153
0 years, female, NA, stage:T3N0M0, dead, 1718 days
25.6
U0158
0 years, male, NA, stage:T1N0M0, dead, 3101 days
25.5
U0098
0 years, male, NA, stage:T3N0M0, dead, 2473 days
25.5
U0882
0 years, male, NA, stage:T3N0M0, alive, 1675 days
25.5
U0462
0 years, female, NA, stage:T4N1M0, alive, 1017 days
25.5
U0084
0 years, male, NA, stage:T3N0M0, dead, 1662 days
25.5
U0302
0 years, male, NA, stage:T1N0M0, alive, 892 days
25.4
U1145
0 years, female, NA, stage:T3N0M0, dead, 445 days
25.4
U0236
0 years, male, NA, stage:T3N1M0, alive, 1842 days
25.4
U1264
0 years, female, NA, stage:T3N0M0, dead, 1583 days
25.3
U3005
0 years, male, NA, stage:T3N0M0, alive, 478 days
25.3
U0135
0 years, female, NA, stage:T3N0M0, alive, 1738 days
25.2
U0367
0 years, female, NA, stage:T3N1M0, alive, 3075 days
25.2
U0154
0 years, male, NA, stage:T3N0M0, alive, 820 days
25.2
U0354
0 years, male, NA, stage:T3N1M0, alive, 430 days
25.2
U0254
0 years, female, NA, stage:T3N1M0, alive, 659 days
25.2
U1049
0 years, female, NA, stage:T3N1M0, alive, 1200 days
25.1
U1162
0 years, male, NA, stage:T2N1M0, dead, 354 days
25.1
U0295
0 years, male, NA, stage:T3N0M0, dead, 2572 days
25.1
U0113
0 years, male, NA, stage:T4N2M0, alive, 1102 days
25.1
U1067
0 years, male, NA, stage:T3N0M0, alive, 1570 days
25.1
U0124
0 years, female, NA, stage:T1N0M0, alive, 2430 days
25.0
U0089
0 years, female, NA, stage:T1NXM0, dead, 2365 days
25.0
U0233
0 years, female, NA, stage:T3N1M0, alive, 975 days
25.0
U1473
0 years, female, NA, stage:T3N0M0, alive, 1553 days
24.9
U2754
0 years, male, NA, stage:T4N0M0, alive, 809 days
24.9
U0449
0 years, female, NA, stage:T3N0M0, alive, 1851 days
24.9
U0004
0 years, female, NA, stage:T4N0M0, alive, 3649 days
24.8
U1472
0 years, female, NA, stage:T3N1M0, alive, 1316 days
24.8
U0960
0 years, male, NA, stage:T3N0M0, alive, 1009 days
24.8
U0244
0 years, female, NA, stage:T3N1M0, alive, 3184 days
24.7
U0199
0 years, female, NA, stage:T4N2M0, alive, 1372 days
24.7
U0416
0 years, male, NA, stage:T1N1M0, alive, 1228 days
24.7
U1276
0 years, male, NA, stage:T3N0M0, alive, 2474 days
24.7
U3029
0 years, male, NA, stage:T2N0M0, alive, 475 days
24.6
U0385
0 years, male, NA, stage:T3N0M0, alive, 902 days
24.6
U0459
0 years, female, NA, stage:T3N0M0, alive, 966 days
24.5
U0177
0 years, female, NA, stage:T3N0M0, alive, 355 days
24.4
U0288
0 years, male, NA, stage:T1N0M0, alive, 1513 days
24.4
U0441
0 years, female, NA, stage:T2N1M0, alive, 2738 days
24.3
U0383
0 years, male, NA, stage:T3N2M1, dead, 595 days
24.3
U2889
0 years, male, NA, stage:T4N0M0, alive, 623 days
24.3
U1031
0 years, male, NA, stage:T1N1M0, alive, 1625 days
24.2
U1338
0 years, female, NA, stage:T4N1M0, dead, 716 days
24.2
U1257
0 years, male, NA, stage:T3N0M0, alive, 833 days
24.2
U1111
0 years, female, NA, stage:T3N0M0, dead, 1631 days
24.1
U0129
0 years, male, NA, stage:T4N0M0, dead, 1265 days
24.1
U1241
0 years, male, NA, stage:T3N1M0, dead, 49 days
24.1
U0171
0 years, female, NA, stage:T3N1M0, dead, 1920 days
24.0
U0471
0 years, female, NA, stage:T3N1M0, alive, 1673 days
24.0
U0357
0 years, female, NA, stage:T3N0M0, alive, 2285 days
23.9
U1250
0 years, male, NA, stage:T2N0M0, alive, 597 days
23.9
U0451
0 years, female, NA, stage:T4N2M0, alive, 3023 days
23.9
U0314
0 years, female, NA, stage:T1N0M0, dead, 2436 days
23.9
U0368
0 years, male, NA, stage:T2N0M0, alive, 801 days
23.8
U0157
0 years, male, NA, stage:T4N0M0, dead, 131 days
23.8
U1366
0 years, male, NA, stage:T3N1M0, alive, 2010 days
23.8
U0356
0 years, male, NA, stage:T4N1M0, alive, 536 days
23.8
U0262
0 years, female, NA, stage:T2N0M0, alive, 2534 days
23.7
U0320
0 years, female, NA, stage:T4N2M1, alive, 188 days
23.7
U0446
0 years, male, NA, stage:T2N0M0, alive, 1446 days
23.7
U0442
0 years, male, NA, stage:T3N0M0, alive, 619 days
23.6
U0168
0 years, male, NA, stage:T3N0M0, dead, 948 days
23.6
U0379
0 years, male, NA, stage:T2N0M0, alive, 1819 days
23.6
U0280
0 years, male, NA, stage:T3N1M1, alive, 2731 days
23.6
U0369
0 years, female, NA, stage:T3N0M0, dead, 1095 days
23.6
U0229
0 years, female, NA, stage:TXN2M1, dead, 2115 days
23.5
U2995
0 years, female, NA, stage:T3N1M0, alive, 491 days
23.5
U0401
0 years, male, NA, stage:T4N1M0, alive, 1715 days
23.5
U2947
0 years, female, NA, stage:T3N0M0, alive, 543 days
23.5
U0141
0 years, male, NA, stage:T3N2M0, alive, 2079 days
23.4
U0916
0 years, female, NA, stage:T3N0M0, alive, 1578 days
23.2
U0333
0 years, female, NA, stage:T3N2M0, dead, 1959 days
23.2
U0400
0 years, male, NA, stage:T4N0M0, dead, 1073 days
23.2
U1040
0 years, male, NA, stage:T2N0M0, alive, 1029 days
23.1
U1059
0 years, male, NA, stage:T3N1M0, alive, 2790 days
23.1
U0175
0 years, male, NA, stage:T3N2M0, alive, 1875 days
23.1
U0117
0 years, female, NA, stage:T2N0M0, dead, 1078 days
23.1
U0108
0 years, female, NA, stage:T3N0M1, alive, 535 days
23.0
U1246
0 years, female, NA, stage:T3N0M0, alive, 1441 days
22.9
U1062
0 years, female, NA, stage:T4N0M0, alive, 1689 days
22.9
U1183
0 years, male, NA, stage:T4N2M0, alive, 959 days
22.9
U0456
0 years, male, NA, stage:T4N0M0, dead, 2222 days
22.9
U2819
0 years, female, NA, stage:T3N0M0, alive, 708 days
22.7
U1120
0 years, male, NA, stage:T4N1M1, alive, 823 days
22.7
U0426
0 years, male, NA, stage:T3N0M0, dead, 976 days
22.6
U3018
0 years, male, NA, stage:T4N1M0, alive, 463 days
22.6
U0125
0 years, female, NA, stage:T1N0M0, dead, 668 days
22.6
U3038
0 years, male, NA, stage:T3N0M0, alive, 328 days
22.4
U0381
0 years, male, NA, stage:T3N1M0, dead, 71 days
22.3
U0225
0 years, male, NA, stage:T3N1M0, alive, 581 days
22.3
U2979
0 years, male, NA, stage:T3N2M0, alive, 616 days
22.3
U0413
0 years, male, NA, stage:T2N0M0, alive, 1228 days
22.3
U1204
0 years, male, NA, stage:T4N2M0, alive, 2214 days
22.3
U0375
0 years, male, NA, stage:T3N0M0, dead, 666 days
22.2
U0180
0 years, male, NA, stage:T3N0M1, dead, 965 days
22.2
U0172
0 years, male, NA, stage:T4N0M0, dead, 678 days
22.2
U1220
0 years, male, NA, stage:T3N2M0, dead, 1953 days
22.2
U0993
0 years, male, NA, stage:T4N2M0, alive, 1267 days
22.1
U1352
0 years, male, NA, stage:T3N2M1, dead, 741 days
22.0
U0068
0 years, female, NA, stage:T3N1M0, alive, 1991 days
21.8
U0109
0 years, female, NA, stage:T4N2M1, alive, 144 days
21.8
U1107
0 years, male, NA, stage:T3N0M0, alive, 329 days
21.8
U0349
0 years, male, NA, stage:T3N1M0, alive, 2682 days
21.7
U0202
0 years, male, NA, stage:T3N0M0, dead, 2670 days
21.7
U0167
0 years, male, NA, stage:T3N1M0, alive, 1820 days
21.5
U3012
0 years, male, NA, stage:T3N0M0, alive, 472 days
21.5
U2953
0 years, female, NA, stage:T4aN0M0, alive, 541 days
21.4
U0245
0 years, female, NA, stage:T3N1M0, dead, 564 days
21.4
U0290
0 years, male, NA, stage:T4N2M0, dead, 593 days
21.4
U0100
0 years, female, NA, stage:T3N0M0, dead, 1920 days
21.3
U0373
0 years, female, NA, stage:T3N0M0, alive, 1822 days
21.2
U0002
0 years, female, NA, stage:T3N2M0, alive, 3691 days
21.1
U0970
0 years, female, NA, stage:T4N1M0, alive, 939 days
21.1
U1401
0 years, female, NA, stage:T3N0M0, alive, 1482 days
21.1
U0166
0 years, female, NA, stage:T3N0M0, alive, 763 days
21.0
U0908
0 years, female, NA, stage:T3N0M1, dead, 40 days
21.0
U0111
0 years, male, NA, stage:T2N0M0, alive, 1117 days
21.0
U3048
0 years, male, NA, stage:T4N2M0, alive, 535 days
21.0
U0144
0 years, male, NA, stage:T3N0M0, alive, 1218 days
20.9
U0085
0 years, male, NA, stage:T4N1M0, dead, 1698 days
20.8
U0414
0 years, male, NA, stage:T3N0M0, alive, 1691 days
20.8
U0070
0 years, male, NA, stage:T1N0M0, dead, 1319 days
20.8
U1127
0 years, female, NA, stage:T3N0M0, alive, 3465 days
20.6
U0287
0 years, female, NA, stage:T2N0M0, alive, 1897 days
20.5
U1201
0 years, male, NA, stage:T3N2M0, alive, 1484 days
20.5
U0263
0 years, female, NA, stage:T3N0M1, alive, 362 days
20.5
U0404
0 years, female, NA, stage:T3N2M0, dead, 204 days
20.5
U0347
0 years, female, NA, stage:T4N1M1, alive, 628 days
20.4
U0390
0 years, male, NA, stage:T3N1M0, alive, 871 days
20.3
U0127
0 years, female, NA, stage:T3N0M0, dead, 2753 days
20.3
U0273
0 years, male, NA, stage:T2N1M0, alive, 2641 days
20.3
U2848
0 years, female, NA, stage:T4N2M0, alive, 669 days
20.2
U0191
0 years, male, NA, stage:T3N1M0, alive, 900 days
20.1
U1317
0 years, male, NA, stage:T4N1M0, alive, 965 days
20.1
U0200
0 years, female, NA, stage:T3N0M0, alive, 2614 days
20.1
U1073
0 years, female, NA, stage:T3N1M0, alive, 1359 days
20.0
U1074
0 years, male, NA, stage:T3N0M0, dead, 1043 days
19.9
U0934
0 years, female, NA, stage:T3N0M0, alive, 1185 days
19.9
U0210
0 years, male, NA, stage:T3N0M0, dead, 1800 days
19.8
U0300
0 years, male, NA, stage:T2N0M0, alive, 974 days
19.8
U0143
0 years, male, NA, stage:T3N2M0, alive, 2313 days
19.5
U0278
0 years, female, NA, stage:T2N0M0, alive, 763 days
19.2
U0999
0 years, male, NA, stage:T3N2M0, alive, 860 days
19.1
U1046
0 years, female, NA, stage:T4N2M1, dead, 697 days
18.8
U0285
0 years, female, NA, stage:T3N0M0, alive, 2165 days
18.7
U1072
0 years, male, NA, stage:T1N0M0, alive, 1446 days
18.5
U1129
0 years, male, NA, stage:T3N0M0, dead, 118 days
18.3
U0363
0 years, male, NA, stage:T3N1M0, alive, 3601 days
18.2
U1303
0 years, male, NA, stage:T4N1M0, alive, 2283 days
17.9
U0178
0 years, female, NA, stage:T3N1M0, dead, 2096 days
17.9
U0218
0 years, female, NA, stage:T3N0M0, alive, 714 days
17.9
U1344
0 years, female, NA, stage:T3N1M0, alive, 1450 days
17.5
U0313
0 years, male, NA, stage:T4N1M0, dead, 1142 days
17.2
U0246
0 years, female, NA, stage:T4N0M0, dead, 1192 days
16.6
U0937
0 years, male, NA, stage:T2N0M0, dead, 1558 days
16.5
U0148
0 years, male, NA, stage:T3N0M0, alive, 1780 days
16.4
U0326
0 years, female, NA, stage:T3N0M0, alive, 3178 days
15.8
U0967
0 years, male, NA, stage:T2N0M0, dead, 1691 days
15.8
U0248
0 years, male, NA, stage:T3N0M0, alive, 1870 days
15.6
U0306
0 years, male, NA, stage:T3N1M0, dead, 717 days
15.5
U1369
0 years, male, NA, stage:T3N0M0, dead, 1604 days
15.0
U0193
0 years, male, NA, stage:T3N1M0, dead, 876 days
14.8
U0234
0 years, male, NA, stage:T1N1M0, alive, 990 days
13.4
U1384
0 years, male, NA, stage:T4N1M0, alive, 1319 days
0.9
U0074
0 years, female, NA, stage:T3N0M0, dead, 1438 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SEC24A is not prognostic in Rectum Adenocarcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
8.2
Number of samples
88
Samples
Sample
Description
TPM
TCGA-EI-6882-01A
0 years, male, white, stage:Stage IIA, alive, 262 days
29.6
TCGA-DC-6683-01A
0 years, male, white, stage:Stage IIIB, alive, 762 days
15.6
TCGA-DC-6160-01A
0 years, male, white, stage:Stage I, alive, 1339 days
15.5
TCGA-AH-6549-01A
0 years, male, white, stage:'--, alive, 532 days
14.7
TCGA-F5-6811-01A
0 years, female, white, stage:Stage IIA, alive, 979 days
13.7
TCGA-EI-7004-01A
0 years, female, white, stage:'--, alive, 257 days
13.1
TCGA-AH-6644-01A
0 years, male, white, stage:'--, alive, 838 days
12.8
TCGA-AH-6547-01A
0 years, female, white, stage:'--, dead, 76 days
12.2
TCGA-EI-6884-01A
0 years, male, white, stage:Stage IIIA, alive, 328 days
12.2
TCGA-EI-6507-01A
0 years, male, white, stage:Stage IIA, alive, 607 days
12.0
TCGA-EF-5831-01A
0 years, male, white, stage:Stage IIA, alive, 127 days
11.8
TCGA-EI-6512-01A
0 years, female, white, stage:Stage IIIB, alive, 538 days
11.7
TCGA-DC-6156-01A
0 years, male, white, stage:Stage IVA, alive, 943 days
11.6
TCGA-DC-6158-01A
0 years, male, white, stage:Stage I, dead, 334 days
11.5
TCGA-CI-6621-01A
0 years, male, white, stage:Stage IIIB, alive, 419 days
11.2
TCGA-F5-6814-01A
0 years, male, white, stage:Stage IIA, alive, 1131 days
11.0
TCGA-AG-3731-01A
0 years, male, stage:Stage IV, alive, 1126 days
10.9
TCGA-EI-6506-01A
0 years, female, white, stage:Stage IIA, alive, 625 days
10.8
TCGA-CI-6622-01A
0 years, male, white, stage:Stage IIB, alive, 1362 days
10.6
TCGA-AH-6903-01A
0 years, male, white, stage:Stage IIIB, alive, 592 days
10.5
TCGA-EI-7002-01A
0 years, male, white, stage:Stage IV, alive, 364 days
10.4
TCGA-AF-A56N-01A
0 years, female, black or african american, stage:Stage IIA, alive, 360 days
10.3
TCGA-AG-4022-01A
0 years, female, stage:Stage II, alive, 1400 days
10.2
TCGA-AF-2693-01A
0 years, male, white, stage:Stage I, alive, 1155 days
10.2
TCGA-AG-3742-01A
0 years, female, stage:Stage I, alive, 30 days
9.7
TCGA-AF-6136-01A
0 years, female, white, stage:Stage IIIB, alive, 741 days
9.6
TCGA-CI-6620-01A
0 years, female, white, stage:Stage IVA, alive, 1009 days
9.5
TCGA-CL-5917-01A
0 years, female, white, stage:Stage IIIC, alive, 2376 days
9.3
TCGA-AF-6655-01A
0 years, male, white, stage:Stage IIIA, alive, 609 days
9.2
TCGA-G5-6235-01A
0 years, male, white, stage:Stage IIIB, alive, 1696 days
9.2
TCGA-AH-6643-01A
0 years, male, white, stage:Stage IIIC, dead, 1314 days
8.9
TCGA-CL-4957-01A
0 years, female, stage:'--, dead, 425 days
8.9
TCGA-EI-6511-01A
0 years, male, white, stage:Stage IIIB, alive, 482 days
8.9
TCGA-DC-6157-01A
0 years, male, black or african american, stage:Stage I, alive, 1581 days
8.8
TCGA-F5-6702-01A
0 years, male, white, stage:Stage IVA, dead, 869 days
8.8
TCGA-F5-6464-01A
0 years, female, white, stage:Stage IIIC, dead, 303 days
8.7
TCGA-AG-4021-01A
0 years, female, stage:Stage IV, dead, 121 days
8.6
TCGA-F5-6571-01A
0 years, female, white, stage:Stage IIA, alive, 1288 days
8.6
TCGA-AH-6544-01A
0 years, male, white, stage:'--, alive, 1173 days
8.6
TCGA-DC-4749-01A
0 years, male, white, stage:Stage I, alive, 762 days
8.5
TCGA-EI-6885-01A
0 years, female, white, stage:Stage IV, alive, 415 days
8.4
TCGA-F5-6465-01A
0 years, female, white, stage:Stage IIA, alive, 1506 days
8.3
TCGA-EI-6510-01A
0 years, female, white, stage:'--, alive, 556 days
8.2
TCGA-EI-6508-01A
0 years, female, white, stage:Stage IIIB, alive, 636 days
8.2
TCGA-DC-6681-01A
0 years, female, white, stage:Stage IVA, alive, 790 days
7.9
TCGA-EI-6514-01A
0 years, female, white, stage:Stage IIA, alive, 496 days
7.8
TCGA-F5-6864-01A
0 years, female, white, stage:Stage IIIB, alive, 379 days
7.7
TCGA-G5-6233-01A
0 years, male, white, stage:'--, dead, 556 days
7.7
TCGA-AH-6897-01A
0 years, male, white, stage:Stage I, alive, 804 days
7.6
TCGA-EI-6881-01A
0 years, male, white, stage:Stage IIIA, alive, 499 days
7.5
TCGA-EF-5830-01A
0 years, male, white, stage:Stage IIB, alive, 106 days
7.4
TCGA-AG-3592-01A
0 years, male, stage:Stage IIA, alive, 1035 days
7.2
TCGA-AF-2687-01A
0 years, male, white, stage:Stage IIIC, alive, 1427 days
7.1
TCGA-G5-6572-01A
0 years, male, white, stage:'--, dead, 1432 days
7.0
TCGA-F5-6813-01A
0 years, male, white, stage:Stage IIIC, dead, 598 days
6.9
TCGA-F5-6861-01A
0 years, female, white, stage:Stage IIA, alive, 1160 days
6.6
TCGA-DC-6682-01A
0 years, male, white, stage:Stage IIA, alive, 762 days
6.6
TCGA-EI-6509-01A
0 years, male, white, stage:Stage IIIC, alive, 517 days
6.6
TCGA-DC-5869-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 943 days
6.5
TCGA-AG-3902-01A
0 years, male, stage:Stage IIA, alive, 974 days
6.3
TCGA-DY-A1DE-01A
0 years, female, white, stage:Stage IIA, alive, 3932 days
6.2
TCGA-AF-4110-01A
0 years, male, white, stage:Stage IVA, alive, 912 days
6.2
TCGA-G5-6641-01A
0 years, male, white, stage:Stage IIIA, alive, 804 days
6.2
TCGA-DC-6154-01A
0 years, female, white, stage:Stage IVA, alive, 365 days
6.1
TCGA-EI-6917-01A
0 years, male, white, stage:Stage IIIA, alive, 531 days
6.0
TCGA-AG-3732-01A
0 years, female, stage:Stage I, alive, 1003 days
5.9
TCGA-AF-5654-01A
0 years, female, white, stage:Stage I, dead, 512 days
5.6
TCGA-BM-6198-01A
0 years, male, white, stage:Stage IIIB, alive, 646 days
5.4
TCGA-EI-6883-01A
0 years, male, white, stage:Stage IIC, alive, 350 days
5.4
TCGA-AF-6672-01A
0 years, male, white, stage:Stage IV, alive, 748 days
5.3
TCGA-F5-6812-01A
0 years, male, white, stage:Stage IIA, alive, 1110 days
5.2
TCGA-AF-2690-01A
0 years, female, white, stage:Stage IIIC, dead, 524 days
5.1
TCGA-DC-5337-01A
0 years, male, white, stage:Stage I, alive, 792 days
5.0
TCGA-DT-5265-01A
0 years, male, asian, stage:Stage II, alive, 384 days
4.8
TCGA-DY-A1DC-01A
0 years, female, white, stage:Stage IIA, dead, 1258 days
4.8
TCGA-EI-6513-01A
0 years, male, white, stage:Stage IIIB, alive, 497 days
4.8
TCGA-AF-3911-01A
0 years, male, white, stage:Stage IIIC, alive, 1148 days
4.6
TCGA-DY-A0XA-01A
0 years, female, white, stage:Stage IIA, alive, 3846 days
4.5
TCGA-F5-6863-01A
0 years, female, white, stage:Stage IIIB, dead, 361 days
4.4
TCGA-AG-3591-01A
0 years, female, stage:Stage IIA, alive, 1035 days
4.2
TCGA-AF-A56L-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 2007 days
4.2
TCGA-AF-A56K-01A
0 years, male, black or african american, stage:Stage IIA, alive, 2635 days
4.2
TCGA-DC-4745-01A
0 years, female, white, stage:Stage IIIB, alive, 639 days
4.0
TCGA-DY-A1DG-01A
0 years, male, white, stage:Stage IVA, dead, 1566 days
2.4
TCGA-DY-A1DF-01A
0 years, female, white, stage:Stage IIIC, dead, 734 days
2.1
TCGA-DY-A1H8-01A
0 years, female, white, stage:Stage IIIA, dead, 992 days
2.0
TCGA-DY-A1DD-01A
0 years, female, white, stage:Stage IIIB, dead, 1741 days
1.3
TCGA-DC-6155-01A
0 years, female, white, stage:Stage IIIA, alive, 425 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SEC24A is not prognostic in Rectum Adenocarcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
26.8
Number of samples
207
Samples
Sample
Description
TPM
U0216
0 years, male, NA, stage:T2N0M0, alive, 2684 days
48.5
U0118
0 years, female, NA, stage:T3N2M0, dead, 350 days
45.2
U0128
0 years, female, NA, stage:T3N1M0, alive, 449 days
42.1
U0849
0 years, female, NA, stage:T4N0M1, dead, 267 days
38.6
U0096
0 years, female, NA, stage:T4N2M1, dead, 257 days
38.6
U0402
0 years, female, NA, stage:T3N1M0, dead, 2487 days
38.3
U2779
0 years, male, NA, stage:T3N0M0, alive, 419 days
36.8
U0407
0 years, male, NA, stage:T3N1M0, dead, 2027 days
36.7
U0671
0 years, male, NA, stage:T3N1M0, dead, 785 days
36.7
U0601
0 years, female, NA, stage:T4N1M0, alive, 1368 days
36.6
U0852
0 years, male, NA, stage:T3N2M1, alive, 1651 days
36.5
U0279
0 years, male, NA, stage:T2N1M0, dead, 176 days
35.7
U0457
0 years, male, NA, stage:T3N0M0, alive, 833 days
35.5
U0652
0 years, male, NA, stage:T3N0M0, alive, 1319 days
35.3
U0534
0 years, female, NA, stage:T3N2M0, alive, 1361 days
34.8
U0604
0 years, male, NA, stage:T3N1M0, alive, 1522 days
34.5
U0418
0 years, male, NA, stage:T4N1M0, alive, 1246 days
34.4
U0814
0 years, female, NA, stage:T3N1M1, dead, 482 days
34.2
U0173
0 years, male, NA, stage:T2N0M0, dead, 2375 days
34.0
U0454
0 years, male, NA, stage:T3N1M0, alive, 2997 days
33.8
U0648
0 years, female, NA, stage:T3N0M0, alive, 1415 days
33.5
U0243
0 years, female, NA, stage:T3N2M0, alive, 2975 days
33.5
U0080
0 years, female, NA, stage:T3N0M0, dead, 489 days
33.2
U0264
0 years, male, NA, stage:T4N2M0, alive, 2020 days
33.2
U0339
0 years, male, NA, stage:T3N2M0, alive, 2155 days
33.1
U0086
0 years, female, NA, stage:T3N1M0, dead, 594 days
33.1
U0296
0 years, male, NA, stage:T3N0M0, alive, 2610 days
32.9
U0190
0 years, male, NA, stage:T3N0M0, alive, 2367 days
32.7
U0650
0 years, female, NA, stage:T2N2M0, alive, 1331 days
32.4
U0409
0 years, female, NA, stage:T3N1M0, alive, 934 days
32.4
U0437
0 years, male, NA, stage:T1N1M0, alive, 849 days
32.4
U0304
0 years, male, NA, stage:T3N2M0, alive, 2065 days
32.1
U0137
0 years, male, NA, stage:T3N1M0, dead, 1799 days
32.1
U0641
0 years, female, NA, stage:T3N0M0, dead, 1626 days
32.1
U0255
0 years, female, NA, stage:T3N2M0, dead, 1079 days
31.9
U0415
0 years, male, NA, stage:T3N1M0, alive, 2526 days
31.8
U0651
0 years, male, NA, stage:T3N0M0, alive, 1354 days
31.8
U0271
0 years, female, NA, stage:T3N1M0, alive, 2414 days
31.7
U0511
0 years, female, NA, stage:T3N0M0, dead, 2387 days
31.7
U0329
0 years, male, NA, stage:T3N1M0, dead, 805 days
31.5
U0417
0 years, female, NA, stage:T3N2M1, dead, 893 days
31.4
U0656
0 years, male, NA, stage:T3N2M0, alive, 1150 days
31.3
U0514
0 years, female, NA, stage:T2N2M0, alive, 2799 days
31.3
U0293
0 years, male, NA, stage:T3N1M0, alive, 2717 days
31.3
U2960
0 years, male, NA, stage:T3N1M0, alive, 176 days
31.1
U0600
0 years, male, NA, stage:T3N1M0, alive, 1659 days
31.0
U0561
0 years, female, NA, stage:T3N2M0, alive, 1577 days
30.6
U0603
0 years, male, NA, stage:T2N1M0, alive, 1904 days
30.6
U0592
0 years, female, NA, stage:T2N0M0, dead, 670 days
30.5
U0097
0 years, male, NA, stage:T3N0M1, dead, 2903 days
30.5
U3047
0 years, male, NA, stage:T3N2M0, alive, 205 days
30.4
U0713
0 years, male, NA, stage:T2N0M0, alive, 359 days
30.4
U0232
0 years, female, NA, stage:T2N0M0, dead, 994 days
30.4
U0535
0 years, female, NA, stage:T4N1M0, alive, 2473 days
30.4
U0508
0 years, male, NA, stage:T3N1M0, alive, 1120 days
30.3
U0088
0 years, male, NA, stage:T3N1M1, dead, 260 days
30.3
U0343
0 years, female, NA, stage:T2N0M0, alive, 701 days
30.2
U0242
0 years, male, NA, stage:T3N0M0, alive, 2950 days
30.2
U0116
0 years, male, NA, stage:T3N1M0, dead, 930 days
30.1
U0478
0 years, male, NA, stage:T4N2M0, alive, 2051 days
30.1
U2994
0 years, female, NA, stage:T4N1M0, alive, 132 days
30.0
U0423
0 years, female, NA, stage:T4N2M0, alive, 2735 days
29.9
U2991
0 years, female, NA, stage:T1N0M0, alive, 135 days
29.9
U3049
0 years, male, NA, stage:T2N0M0, alive, 533 days
29.9
U0584
0 years, male, NA, stage:T3N2M0, alive, 2705 days
29.8
U0502
0 years, male, NA, stage:T4N1M0, alive, 1065 days
29.8
U0132
0 years, male, NA, stage:T3N1M0, alive, 1798 days
29.8
U0539
0 years, male, NA, stage:T4N2M0, alive, 2017 days
29.7
U0492
0 years, male, NA, stage:T3N2M0, alive, 1114 days
29.5
U0230
0 years, female, NA, stage:T1N1M0, alive, 3152 days
29.5
U0406
0 years, female, NA, stage:T4N2M1, dead, 778 days
29.4
U0120
0 years, female, NA, stage:T3N0M0, alive, 3233 days
29.4
U0519
0 years, male, NA, stage:T4N2M0, dead, 519 days
29.3
U0581
0 years, female, NA, stage:T3N2M0, alive, 1660 days
29.3
U0542
0 years, male, NA, stage:T3N2M0, dead, 1482 days
29.1
U0497
0 years, female, NA, stage:T3N1M0, alive, 1414 days
29.0
U0647
0 years, female, NA, stage:T3N0M0, alive, 1476 days
29.0
U0138
0 years, male, NA, stage:T3N1M0, dead, 2472 days
28.9
U2943
0 years, male, NA, stage:T3N0M0, alive, 189 days
28.7
U2764
0 years, male, NA, stage:T3N2M0, alive, 440 days
28.6
U0391
0 years, female, NA, stage:T3N0M0, alive, 1179 days
28.6
U0605
0 years, male, NA, stage:T2N0M0, alive, 952 days
28.6
U0284
0 years, male, NA, stage:T3N2M0, alive, 581 days
28.4
U0657
0 years, female, NA, stage:T2N0M0, dead, 1109 days
28.4
U0663
0 years, female, NA, stage:T3N1M0, alive, 762 days
28.3
U0649
0 years, male, NA, stage:T2N0M0, alive, 1424 days
28.2
U0558
0 years, female, NA, stage:T3N2M0, alive, 2011 days
28.2
U0147
0 years, female, NA, stage:T3N0M0, dead, 2085 days
28.1
U0470
0 years, female, NA, stage:T2N2M0, alive, 961 days
28.0
U0776
0 years, male, NA, stage:T4N2M0, alive, 1702 days
27.9
U0565
0 years, male, NA, stage:T4N1M0, alive, 1452 days
27.8
U0802
0 years, male, NA, stage:T3N2M1, dead, 338 days
27.6
U0862
0 years, male, NA, stage:T4N2M1, dead, 1064 days
27.6
U0001
0 years, female, NA, stage:T3N0M0, alive, 3188 days
27.5
U0346
0 years, male, NA, stage:T4N2M0, alive, 1148 days
27.5
U0602
0 years, male, NA, stage:T2N0M0, alive, 1385 days
27.3
U0030
0 years, female, NA, stage:T2N0M0, dead, 987 days
27.3
U0805
0 years, male, NA, stage:T3N1M1, dead, 731 days
27.3
U2955
0 years, male, NA, stage:T3N1M0, alive, 181 days
27.2
U0351
0 years, female, NA, stage:T3N2M0, alive, 2886 days
27.2
U0371
0 years, female, NA, stage:T3N0M0, alive, 2688 days
27.2
U0485
0 years, male, NA, stage:T3N0M0, dead, 2737 days
27.2
U0800
0 years, male, NA, stage:T3N2M1, dead, 411 days
27.2
U0637
0 years, male, NA, stage:T3N1M0, alive, 1997 days
27.2
U0645
0 years, male, NA, stage:T3N0M0, alive, 1567 days
27.1
U0640
0 years, male, NA, stage:T2N0M0, alive, 1696 days
27.1
U0707
0 years, male, NA, stage:T3N1M0, alive, 518 days
27.1
U0809
0 years, female, NA, stage:T3N1M1, dead, 275 days
27.1
U0380
0 years, male, NA, stage:T2N0M0, alive, 2155 days
27.0
U0484
0 years, male, NA, stage:T4N2M0, alive, 1275 days
26.9
U0331
0 years, male, NA, stage:T3N1M1, dead, 906 days
26.9
U0140
0 years, male, NA, stage:T3N2M0, alive, 2655 days
26.6
U0658
0 years, male, NA, stage:T3N2M0, alive, 1108 days
26.2
U0159
0 years, female, NA, stage:T3N1M0, alive, 1517 days
26.1
U2761
0 years, female, NA, stage:T3N1M0, alive, 447 days
25.9
U2834
0 years, male, NA, stage:T3N1M0, alive, 323 days
25.8
U0494
0 years, male, NA, stage:T4N2M0, alive, 1290 days
25.7
U0431
0 years, female, NA, stage:T3N1M0, alive, 695 days
25.7
U0654
0 years, male, NA, stage:T3N2M0, alive, 1220 days
25.6
U0294
0 years, male, NA, stage:T4N0M1, alive, 561 days
25.4
U0359
0 years, male, NA, stage:T3N2M0, dead, 2443 days
25.4
U0793
0 years, male, NA, stage:T3N1M1, dead, 195 days
25.2
U0553
0 years, female, NA, stage:T3N2M0, alive, 1704 days
25.1
U0591
0 years, male, NA, stage:T2N0M0, alive, 1023 days
25.0
U0572
0 years, female, NA, stage:T3N1M0, alive, 2621 days
24.9
U3023
0 years, female, NA, stage:T2N0M0, alive, 404 days
24.8
U0213
0 years, male, NA, stage:T3N1M0, alive, 3018 days
24.7
U0695
0 years, male, NA, stage:T3N0M0, alive, 566 days
24.6
U0466
0 years, male, NA, stage:T3N0M0, alive, 1381 days
24.6
U0258
0 years, male, NA, stage:T4N1M2, dead, 195 days
24.6
U0334
0 years, male, NA, stage:T3N1M0, alive, 3171 days
24.6
U0568
0 years, male, NA, stage:T4N1M0, alive, 1287 days
24.5
U0562
0 years, female, NA, stage:T3N1M0, alive, 3092 days
24.4
U0498
0 years, female, NA, stage:T4N1M0, alive, 1906 days
24.4
U0555
0 years, male, NA, stage:T3N2M0, alive, 2043 days
24.4
U0804
0 years, female, NA, stage:T3N2M1, dead, 380 days
24.3
U0803
0 years, female, NA, stage:T3N1M1, dead, 495 days
24.3
U0079
0 years, male, NA, stage:T4N2M0, dead, 1891 days
24.2
U0578
0 years, male, NA, stage:T2N2M0, alive, 1724 days
24.1
U0322
0 years, male, NA, stage:T4N2M0, alive, 1694 days
24.1
U0857
0 years, male, NA, stage:T4N2M1, dead, 954 days
24.1
U0276
0 years, male, NA, stage:T3N1M1, alive, 934 days
23.9
U0299
0 years, female, NA, stage:T4N2M0, alive, 43426 days
23.9
U0593
0 years, male, NA, stage:T4bN0M0, alive, 876 days
23.9
U0353
0 years, female, NA, stage:T1N0M0, alive, 2912 days
23.9
U0205
0 years, female, NA, stage:T3N2M0, alive, 2984 days
23.9
U0595
0 years, male, NA, stage:T2N0M0, alive, 2535 days
23.8
U2972
0 years, male, NA, stage:T3N0M0, alive, 161 days
23.8
U0430
0 years, male, NA, stage:T3N2M0, dead, 2472 days
23.8
U0533
0 years, male, NA, stage:T3N2M0, alive, 2248 days
23.8
U0305
0 years, male, NA, stage:T3N1M0, alive, 2676 days
23.7
U0577
0 years, female, NA, stage:T3N2M0, alive, 2474 days
23.6
U0694
0 years, male, NA, stage:T4N0M0, dead, 489 days
23.4
U0666
0 years, male, NA, stage:T3N1M0, alive, 709 days
23.4
U0594
0 years, male, NA, stage:T3N0M0, alive, 2852 days
23.1
U0820
0 years, male, NA, stage:T3NXM1, dead, 622 days
23.0
U0865
0 years, female, NA, stage:T3N1M1, dead, 856 days
22.8
U0532
0 years, male, NA, stage:T3N0M0, dead, 730 days
22.7
U0192
0 years, male, NA, stage:T3N0M0, alive, 2081 days
22.7
U0241
0 years, female, NA, stage:T2N1M0, alive, 552 days
22.7
U0552
0 years, male, NA, stage:T3N2M0, alive, 1701 days
22.7
U0643
0 years, female, NA, stage:T2N1M0, dead, 1583 days
22.6
U0861
0 years, female, NA, stage:T4N2M1, dead, 184 days
22.5
U0282
0 years, male, NA, stage:T3N2M0, dead, 1869 days
22.4
U0556
0 years, male, NA, stage:T3N2M0, alive, 2037 days
22.4
U0557
0 years, female, NA, stage:T3N2M0, alive, 2009 days
22.4
U0325
0 years, male, NA, stage:T3N0M0, dead, 1947 days
22.1
U0114
0 years, male, NA, stage:T3N0M0, alive, 1910 days
22.0
U0311
0 years, female, NA, stage:T3N1M0, alive, 1176 days
21.9
U0251
0 years, male, NA, stage:T2N0M0, alive, 1906 days
21.7
U0434
0 years, male, NA, stage:T2N0M0, alive, 2558 days
21.5
U0174
0 years, male, NA, stage:T3N0M0, alive, 450 days
21.4
U0750
0 years, female, NA, stage:T3N2M0, dead, 1393 days
21.3
U0238
0 years, male, NA, stage:T3N0M0, dead, 868 days
21.2
U0366
0 years, male, NA, stage:T3NXM1, alive, 895 days
21.1
U0212
0 years, male, NA, stage:T3N0M1, alive, 1330 days
20.8
U0077
0 years, female, NA, stage:T2N0M0, dead, 588 days
20.8
U0405
0 years, male, NA, stage:T3N1M0, alive, 829 days
20.6
U0642
0 years, male, NA, stage:T3N0M0, alive, 1603 days
20.6
U0538
0 years, female, NA, stage:T3N1M0, alive, 1308 days
20.5
U0155
0 years, male, NA, stage:T2N0M0, dead, 1672 days
20.4
U0587
0 years, male, NA, stage:T3N1M0, alive, 2107 days
20.4
U0422
0 years, female, NA, stage:T3N2M1, dead, 1710 days
20.2
U0298
0 years, male, NA, stage:T3N1M0, alive, 513 days
20.0
U0675
0 years, female, NA, stage:T4N1M0, dead, 89 days
19.9
U0686
0 years, female, NA, stage:T4bN0M0, dead, 123 days
19.9
U0324
0 years, female, NA, stage:T4N1M0, alive, 938 days
19.4
U2836
0 years, male, NA, stage:T3N0M0, alive, 322 days
19.3
U0194
0 years, male, NA, stage:T3N1M0, alive, 680 days
19.1
U0364
0 years, female, NA, stage:T4N2M1, dead, 151 days
19.1
U0228
0 years, male, NA, stage:T2N0M0, alive, 963 days
18.9
U0468
0 years, female, NA, stage:T3N0M0, alive, 1921 days
18.8
U0848
0 years, male, NA, stage:T3N1M1, dead, 1185 days
18.6
U0388
0 years, male, NA, stage:T2N1M0, alive, 2186 days
18.2
U0458
0 years, male, NA, stage:T3N2M0, alive, 1073 days
18.2
U0638
0 years, male, NA, stage:T2N0M0, alive, 1801 days
18.1
U0188
0 years, female, NA, stage:T3N1M0, alive, 2134 days
17.9
U0512
0 years, male, NA, stage:T3N0M0, alive, 2550 days
17.8
U0237
0 years, male, NA, stage:T3N1M0, alive, 2492 days
16.5
U0545
0 years, male, NA, stage:T3N0M0, alive, 2340 days
16.3
U0220
0 years, male, NA, stage:T2N0M0, alive, 1066 days
16.1
U0579
0 years, female, NA, stage:T4aN0M0, alive, 2845 days
16.0
U0596
0 years, male, NA, stage:T3N0M0, alive, 2233 days
15.8
U0374
0 years, female, NA, stage:T2N0M0, alive, 1067 days
15.7
U0550
0 years, male, NA, stage:T3N2M0, alive, 2191 days
12.0
U0576
0 years, male, NA, stage:T3N2M0, alive, 2540 days
11.8
U0093
0 years, male, NA, stage:T3N2M0, dead, 1118 days
11.6
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COLON ADENOCARCINOMA - Protein relative expression (CPTAC)
Number of samples
197
Samples
Sample ID
Sample type
nRPX
66b57abc-0d49-46bb-a390-0e11a9_D2
Tumor
0.6
c9730cb4-b52c-4ca8-9652-4509d0_D2
Tumor
0.6
66b829db-1cdd-460d-b2f3-0e9ca9_D3
Tumor
0.5
88c621d7-7fb3-4825-abbe-82ae4c_D2
Normal
0.4
3d797911-d476-436f-9cce-33e20c_D8
Tumor
0.4
8960a27e-69d8-4ec8-a795-c6cf8a_D3
Tumor
0.4
6b0a3188-d8ca-4d50-a377-a8fe4c_D2
Normal
0.3
722378ea-d1a7-4cfc-aca5-ba45f9_D8
Tumor
0.3
54565eae-05c5-4dae-bde9-ae4874_D2
Normal
0.3
cd6a4013-2958-44b9-a4f1-45c9e4_D2
Tumor
0.3
f69deaeb-6b6f-4c61-8900-fd0f26_D3
Tumor
0.3
f9d6fb1b-988e-4D88-9272-cc672f_D8
Tumor
0.3
d0511ea6-43c3-4c61-b08e-cf49b7_D3
Tumor
0.3
5271982c-5de1-4d6e-b414-b1f3ef_D2
Tumor
0.3
c8694e31-2c8f-4eb6-a7ef-a137d9_D3
Tumor
0.3
43192517-085e-450e-9481-0a6713_D3
Tumor
0.3
c7aeb685-31b3-445e-8177-a3e729_D3
Tumor
0.3
0065bfd9-e1b9-43a8-9379-9658ba_D3
Tumor
0.3
26acb513-3ffe-49ad-8581-9dfc97_D2
Normal
0.3
7cc7f69f-99f5-4b23-a9e0-ba0dc8_D8
Tumor
0.3
21cab01c-e968-42cc-9651-1e53c0_D3
Tumor
0.3
8b9e4266-7754-4f2c-ac9e-329905_D2
Tumor
0.3
41ee934e-f7a3-4ef5-8a83-e2ac56_D2
Tumor
0.3
2f8b02e4-1848-4abc-a95e-dd9eb5_D3
Tumor
0.3
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Tumor
0.2
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Tumor
0.2
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Tumor
0.2
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Tumor
0.2
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Tumor
0.2
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Normal
0.2
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Tumor
0.2
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Tumor
0.2
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Tumor
0.2
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Tumor
0.2
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Normal
0.2
79097be1-cd36-4a23-99d1-3d744f_D2
Tumor
0.2
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Normal
0.2
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Tumor
0.2
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Tumor
0.2
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Normal
0.2
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Tumor
0.2
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Tumor
0.2
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Tumor
0.2
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Tumor
0.1
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Normal
0.1
23e938d0-92b8-4aea-90c1-4385df_D2
Normal
0.1
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Normal
0.1
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Tumor
0.1
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Tumor
0.1
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Normal
0.1
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Tumor
0.1
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Normal
0.1
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Tumor
0.1
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Tumor
0.1
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Tumor
0.1
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Tumor
0.1
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Tumor
0.1
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Tumor
0.1
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Normal
0.1
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Normal
0.1
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Normal
0.1
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Tumor
0.1
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Normal
0.1
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Tumor
0.1
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Normal
0.1
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Normal
0.1
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Normal
0.1
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Tumor
0.1
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Normal
0.1
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Normal
0.1
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Tumor
0.1
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Normal
0.1
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Normal
0.1
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Tumor
0.1
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Tumor
0.1
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Normal
0.1
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Tumor
0.1
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Tumor
0.1
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Normal
0.0
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Tumor
0.0
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Tumor
0.0
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Normal
0.0
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Normal
0.0
211cbcef-cb1f-4c80-a1c8-a76d3c_D2
Normal
0.0
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Tumor
0.0
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Tumor
0.0
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Normal
0.0
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Normal
0.0
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Normal
0.0
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Normal
0.0
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Tumor
0.0
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Normal
0.0
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Normal
0.0
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Tumor
0.0
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Normal
0.0
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Tumor
0.0
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Tumor
0.0
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Normal
0.0
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Normal
0.0
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Tumor
0.0
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Tumor
0.0
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Tumor
0.0
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Normal
0.0
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Tumor
0.0
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Tumor
0.0
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Normal
0.0
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Normal
0.0
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Tumor
0.0
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Tumor
0.0
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Normal
0.0
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Tumor
0.0
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Tumor
0.0
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Tumor
0.0
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Normal
0.0
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Normal
0.0
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Tumor
0.0
e196a0b4-2a05-43de-bb30-ceb761_D2
Tumor
0.0
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Normal
0.0
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Normal
0.0
6e0d04fc-e6a8-41ed-b6f3-45537d_D2
Normal
0.0
5a3aa99d-ca10-45f6-939f-12392a_D2
Normal
0.0
cc271b3d-ed33-481f-9d23-15f2f6_D2
Normal
0.0
325b5314-6f3c-4d79-9b36-4e7ded_D2
Normal
0.0
4c9dcc8c-ccdc-4336-8e23-107feb_D2
Normal
0.0
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Normal
0.0
c9f0f144-47f3-4d64-b29f-bcedfa_D2
Normal
0.0
0d5554d1-1653-4589-a44f-43113e_D2
Normal
0.0
bed27f66-ef3b-4868-b4ad-205018_D2
Normal
0.0
0784c7b3-e6a4-42a8-9288-eb4ba0_D2
Normal
0.0
2167c594-c33f-4795-b95b-69bd07_D2
Tumor
0.0
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Tumor
0.0
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Normal
-0.1
a84149b1-8453-45f0-8400-d7b12f_D2
Normal
-0.1
1fbb1add-4660-4ec1-b8c2-360f9f_D2
Normal
-0.1
5e886f1c-8165-4232-9591-d80799_D2
Normal
-0.1
76498650-fdbf-4f5d-a19a-cce9a2_D2
Normal
-0.1
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Tumor
-0.1
01d1ffca-4235-4dfe-bf62-56f71d_D3
Tumor
-0.1
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Tumor
-0.1
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Normal
-0.1
2d266d2d-4bb3-436c-a3e7-06acb2_D3
Tumor
-0.1
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Normal
-0.1
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Tumor
-0.1
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Tumor
-0.1
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Normal
-0.1
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Normal
-0.1
a90eb718-6a8f-4cbf-89c1-f9e9bd_D2
Tumor
-0.1
526c3664-5b9b-4a2b-a00e-a14623_D2
Tumor
-0.1
c307b7b0-534a-45fa-a420-35f773_D2
Normal
-0.1
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Normal
-0.1
0f757044-9bc8-4ed4-90f3-e0a49a_D3
Tumor
-0.1
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Normal
-0.1
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Tumor
-0.1
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Normal
-0.1
1136008b-97ce-49b0-bf24-abbea6_D2
Normal
-0.1
6d9f8b06-f28c-4e9b-823b-33ebb7_D2
Normal
-0.1
cd3a9d59-bf13-48f3-ae97-bdbca4_D2
Normal
-0.1
16ac8458-5200-4302-9ad0-b311df_D2
Normal
-0.1
154115ac-2ec2-439d-b55e-0464ee_D2
Normal
-0.1
176d1b96-8c6e-44fe-8a32-e15194_D2
Normal
-0.1
3a17283c-a0f4-4514-956b-080d11_D2
Normal
-0.1
6e20c8e9-ab75-4996-9296-445b00_D2
Tumor
-0.1
2cc46aec-6142-4fb9-aca5-c442b9_D2
Normal
-0.1
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Tumor
-0.1
5cf5e61d-21ff-4678-9126-14e9bb_D2
Normal
-0.1
9a48cf57-e1f0-4ea1-9804-d563f2_D2
Normal
-0.1
71b2c1cc-0a31-4ca8-8beb-251e17_D2
Normal
-0.1
41a04113-2061-4923-bca5-da586c_D2
Normal
-0.1
067db520-1b1f-4569-9414-e37a6e_D2
Normal
-0.1
f6afe41c-111d-4818-8485-fe95e0_D2
Tumor
-0.1
019cd0c0-733d-4b25-90e3-d54ce0_D2
Normal
-0.1
1f79fed9-f0d4-4c45-acd2-ea1441_D2
Normal
-0.1
5c70e654-583c-4dd3-ad42-0d9b39_D2
Normal
-0.2
cd89ffbb-574a-4052-bd9a-00c890_D2
Tumor
-0.2
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Normal
-0.2
233ec093-9a30-4ef4-a12c-91757e_D2
Normal
-0.2
7784e2e5-c0e1-4b85-8cc1-7faac8_D2
Normal
-0.2
372c900a-fced-4eef-9dc4-7282ec_D2
Tumor
-0.2
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Normal
-0.2
591fb460-703a-437d-8d9a-ff2a35_D3
Tumor
-0.2
092c5a37-325b-4181-b230-2d8fff_D2
Tumor
-0.2
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Normal
-0.2
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Tumor
-0.2
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Normal
-0.2
65867ab1-5eab-44a8-b2bb-d27263_D2
Normal
-0.2
7bdfa5c9-d11f-4600-9c44-a87996_D2
Normal
-0.2
bc574f73-89ba-44d7-992e-82622c_D3
Tumor
-0.2
02cde0c0-6840-495b-9b11-007d82_D2
Normal
-0.2
1c070992-647b-4173-a481-904c4d_D2
Normal
-0.2
47d2a435-b203-4438-ae72-53c424_D2
Normal
-0.2
4bb08fad-fa5e-471e-978b-6b09ab_D2
Tumor
-0.2
7fd386f0-e7f6-4ee1-9cd7-b3318a_D2
Normal
-0.2
206f3bd9-f62c-4663-8fdb-5b731b_D2
Normal
-0.2
359f5c81-2575-497e-8630-e4866f_D2
Normal
-0.3
a27cf22d-836e-49a7-802f-47c1db_D2
Normal
-0.3
820a3f08-5bb1-44b3-a133-ee167e_D2
Tumor
-0.3
d6584b4a-ca99-4a2a-8b4e-c8b22e_D3
Tumor
-0.3
Show allShow less
COLORECTAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
