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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SKP1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
308.2
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
833.6
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
723.5
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
637.5
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
634.9
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
629.2
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
606.7
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
592.3
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
556.9
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
534.1
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
511.9
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
493.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
471.1
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
453.2
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
404.4
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
393.7
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
386.2
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
377.1
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
365.6
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
350.3
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
335.7
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
331.5
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
320.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
315.6
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
310.3
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
308.7
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
306.1
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
298.7
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
289.2
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
288.6
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
282.1
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
281.0
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
280.3
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
272.3
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
265.8
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
263.1
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
262.1
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
259.1
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
249.4
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
248.3
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
242.8
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
237.0
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
233.9
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
228.2
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
220.5
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
217.2
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
216.5
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
207.4
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
205.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
174.2
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
173.1
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
162.0
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
158.2
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
155.6
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
150.9
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
145.5
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
135.0
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
134.8
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
126.1
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
121.9
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
108.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
99.2
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
84.8
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
43.7
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SKP1 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
408.5
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
1227.1
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
971.5
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
830.3
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
812.8
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
793.4
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
780.4
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
780.2
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
775.3
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
774.6
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
753.2
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
751.8
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
748.4
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
730.4
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
718.8
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
714.6
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
705.6
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
701.8
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
688.9
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
687.9
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
683.6
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
681.7
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
676.6
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
676.3
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
671.3
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
669.8
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
668.4
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
663.8
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
661.7
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
659.8
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
653.7
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
650.1
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
649.5
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
647.5
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
647.2
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
644.5
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
643.1
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
642.0
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
641.4
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
638.5
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
637.4
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
634.4
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
633.6
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
631.7
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
630.5
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
628.1
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
624.8
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
621.2
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
619.0
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
615.7
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
613.0
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
608.8
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
608.6
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
606.9
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
606.3
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
605.2
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
600.7
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
591.8
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
590.5
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
590.3
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
589.2
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
588.4
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
587.8
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
587.4
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
583.8
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
583.2
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
583.1
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
582.4
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
581.1
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
579.4
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
577.5
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
575.1
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
574.8
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
574.8
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
574.0
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
573.7
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
573.4
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
570.5
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
567.6
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
567.5
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
566.1
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
565.9
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
565.7
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
562.4
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
559.4
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
558.5
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
557.9
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
555.7
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
555.3
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
554.8
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
554.4
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
552.9
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
552.6
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
552.2
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
552.2
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
550.8
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
550.1
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
548.5
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
547.7
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
546.7
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
545.4
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
543.8
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
543.6
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
543.5
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
543.4
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
542.6
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
541.8
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
540.5
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
538.9
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
538.0
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
533.3
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
532.7
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
532.3
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
531.7
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
530.2
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
529.5
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
528.6
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
528.1
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
526.3
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
525.7
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
525.5
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
525.3
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
525.2
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
524.2
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
523.7
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
522.7
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
522.3
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
522.2
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
519.4
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
519.3
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
519.3
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
519.2
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
518.7
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
516.7
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
516.7
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
515.6
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
514.1
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
513.2
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
512.5
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
512.3
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
511.7
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
510.9
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
510.6
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
510.3
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
510.3
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
509.9
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
509.9
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
508.8
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
508.6
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
508.2
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
506.8
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
506.6
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
504.7
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
504.1
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
503.9
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
503.8
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
503.1
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
502.8
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
499.6
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
499.4
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
497.1
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
496.7
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
496.5
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
495.7
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
495.5
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
495.2
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
495.0
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
494.3
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
492.8
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
492.3
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
491.3
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
489.0
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
488.5
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
488.5
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
487.5
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
487.2
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
487.1
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
487.1
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
482.8
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
481.7
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
481.5
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
480.8
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
480.7
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
480.4
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
479.0
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
478.9
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
478.8
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
478.5
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
477.8
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
471.9
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
470.2
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
469.6
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
469.6
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
467.6
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
466.9
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
465.6
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
463.2
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
462.6
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
462.0
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
460.8
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
460.6
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
458.9
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
458.1
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
456.7
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
456.1
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
455.8
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
453.6
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
452.3
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
452.2
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
451.9
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
451.2
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
450.9
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
449.8
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
449.6
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
449.6
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
449.0
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
448.2
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
447.2
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
447.0
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
446.6
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
445.6
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
442.7
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
441.3
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
439.5
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
438.9
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
438.1
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
437.4
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
437.2
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
436.6
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
436.6
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
435.9
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
435.6
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
435.1
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
431.0
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
430.8
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
428.0
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
427.3
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
427.2
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
427.1
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
426.5
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
424.0
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
422.9
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
422.3
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
422.2
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
421.9
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
420.8
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
420.2
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
419.7
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
419.5
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
418.7
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
418.6
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
418.2
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
418.1
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
414.9
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
414.5
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
414.1
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
412.5
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
412.3
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
411.3
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
411.1
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
411.0
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
409.7
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
407.8
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
407.2
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
406.8
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
406.3
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
405.3
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
404.7
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
404.0
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
403.2
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
403.0
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
402.2
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
401.0
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
400.1
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
399.9
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
399.0
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
398.4
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
398.1
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
397.5
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
396.3
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
395.8
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
394.5
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
393.7
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
393.2
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
393.1
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
392.8
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
392.1
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
389.9
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
389.7
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
389.6
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
389.1
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
388.7
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
388.6
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
388.2
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
387.2
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
385.7
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
384.1
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
383.6
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
382.5
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
381.8
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
381.6
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
380.8
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
380.1
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
379.2
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
379.0
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
377.9
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
377.4
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
375.9
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
375.2
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
375.1
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
374.3
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
373.6
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
373.5
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
372.5
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
370.5
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
369.4
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
367.5
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
367.3
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
364.1
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
363.7
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
362.9
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
361.5
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
360.6
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
359.9
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
359.6
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
358.9
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
358.4
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
358.1
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
356.9
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
356.1
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
355.0
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
354.2
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
354.0
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
352.8
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
352.5
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
350.5
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
350.5
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
347.9
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
343.6
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
343.3
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
340.7
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
339.0
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
337.9
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
337.7
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
336.8
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
334.6
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
333.4
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
332.0
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
332.0
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
331.3
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
330.0
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
329.8
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
328.6
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
328.5
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
327.8
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
327.4
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
326.9
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
326.9
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
326.1
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
325.9
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
325.6
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
324.4
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
324.3
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
323.4
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
323.3
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
321.2
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
319.8
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
317.3
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
317.0
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
316.6
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
316.3
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
313.8
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
312.9
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
312.8
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
311.0
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
308.2
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
306.8
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
306.8
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
306.4
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
305.8
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
305.5
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
304.3
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
303.5
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
303.0
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
302.9
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
302.0
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
300.9
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
300.0
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
297.9
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
296.0
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
295.5
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
294.6
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
294.4
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
292.6
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
291.6
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
291.5
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
291.0
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
290.9
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
289.2
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
288.5
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
288.3
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
287.5
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
287.0
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
286.8
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
284.1
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
283.4
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
283.2
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
282.8
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
281.5
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
280.6
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
278.5
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
277.7
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
277.4
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
277.3
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
275.2
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
274.3
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
274.3
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
274.2
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
273.5
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
273.0
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
272.5
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
269.8
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
268.8
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
267.8
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
267.7
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
265.9
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
264.0
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
263.9
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
261.7
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
261.6
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
254.7
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
253.9
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
253.7
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
251.6
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
250.5
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
249.1
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
246.9
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
246.6
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
242.0
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
241.8
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
241.6
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
241.1
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
241.0
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
239.7
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
238.3
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
238.0
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
235.9
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
234.3
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
233.7
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
233.3
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
232.9
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
229.0
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
227.7
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
224.7
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
222.6
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
221.5
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
219.2
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
218.5
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
216.4
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
214.0
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
213.0
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
211.4
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
206.2
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
205.0
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
202.2
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
200.3
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
199.9
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
197.2
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
193.6
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
193.5
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
190.8
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
189.0
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
186.5
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
186.3
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
183.5
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
177.2
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
175.5
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
174.1
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
173.2
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
173.2
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
172.7
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
172.5
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
170.2
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
169.3
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
168.9
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
168.2
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
167.7
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
160.8
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
157.6
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
143.5
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
141.4
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
139.6
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
138.6
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
136.8
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
135.0
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
132.8
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
125.5
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
123.4
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
117.6
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
110.5
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
110.0
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
109.9
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
108.3
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
107.7
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
103.8
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
99.7
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
97.9
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
94.9
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
89.0
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
88.6
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
81.5
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
77.7
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
76.0
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
68.5
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
66.7
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
57.0
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
56.6
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
53.5
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
50.6
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
49.9
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
42.8
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SKP1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
492.2
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
768.8
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
759.7
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
758.8
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
753.6
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
747.5
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
737.0
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
735.5
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
707.4
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
693.6
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
681.8
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
671.7
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
657.6
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
654.8
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
653.1
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
651.6
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
639.4
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
638.9
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
636.2
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
629.8
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
623.2
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
609.6
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
607.2
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
606.3
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
594.1
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
585.9
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
581.8
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
574.0
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
572.6
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
568.8
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
559.4
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
553.4
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
553.3
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
552.7
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
552.7
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
549.3
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
548.4
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
539.8
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
538.8
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
535.1
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
532.7
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
532.1
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
517.9
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
514.6
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
513.8
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
513.1
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
511.7
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
510.3
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
490.1
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
483.2
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
471.7
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
471.0
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
468.6
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
466.1
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
457.5
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
457.1
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
456.5
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
455.1
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
450.8
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
450.2
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
443.3
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
438.7
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
429.9
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
427.7
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
425.3
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
425.1
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
424.2
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
422.1
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
419.1
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
417.6
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
417.3
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
416.8
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
411.4
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
404.2
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
402.7
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
401.5
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
400.1
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
399.9
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
395.6
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
393.0
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
388.4
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
383.3
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
382.8
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
382.4
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
375.3
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
370.7
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
359.0
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
353.6
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
343.4
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
341.3
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
327.6
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
326.3
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
299.5
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
298.6
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
288.2
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
285.0
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
239.0
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
230.0
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
223.7
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
214.7
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SKP1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
272.3
Number of samples
282
Samples
Sample
Description
TPM
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
984.8
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
822.4
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
818.4
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
768.2
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
718.2
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
701.6
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
663.0
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
643.8
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
611.2
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
603.8
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
598.4
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
597.8
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
597.5
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
569.8
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
568.3
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
564.3
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
556.5
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
538.2
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
530.0
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
517.3
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
516.8
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
515.8
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
503.9
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
482.7
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
468.6
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
464.3
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
462.6
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
460.1
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
460.1
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
458.0
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
456.9
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
454.5
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
448.4
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
440.7
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
440.0
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
439.9
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
439.2
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
437.4
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
437.2
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
430.7
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
426.4
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
425.1
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
423.6
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
422.8
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
418.5
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
413.1
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
410.9
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
403.1
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
401.9
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
401.7
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
400.1
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
398.4
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
397.8
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
393.7
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
393.0
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
392.3
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
385.2
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
384.3
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
383.0
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
380.9
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
374.8
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
371.7
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
370.3
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
366.3
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
364.5
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
364.3
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
362.5
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
360.0
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
360.0
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
358.2
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
355.6
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
355.5
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
353.6
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
350.5
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
348.2
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
347.7
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
346.5
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
345.9
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
345.7
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
342.8
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
338.5
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
335.8
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
335.4
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
332.9
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
332.3
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
330.4
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
327.1
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
325.2
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
321.7
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
321.3
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
321.3
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
320.8
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
317.9
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
314.3
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
314.2
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
313.4
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
311.0
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
311.0
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
309.7
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
309.2
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
307.2
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
305.9
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
301.0
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
299.1
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
298.2
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
298.0
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
293.2
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
290.2
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
288.8
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
288.8
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
288.7
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
285.9
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
283.2
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
279.3
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
279.2
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
279.1
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
276.3
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
275.2
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
273.1
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
271.0
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
267.8
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
267.6
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
267.1
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
267.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
266.9
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
266.3
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
266.0
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
265.3
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
263.8
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
263.3
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
259.2
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
257.7
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
256.6
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
256.5
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
255.8
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
255.4
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
255.3
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
254.2
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
254.0
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
253.8
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
253.6
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
253.0
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
252.3
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
251.5
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
251.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
250.4
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
249.9
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
249.0
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
247.7
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
246.2
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
245.1
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
244.5
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
243.6
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
242.3
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
232.3
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
232.1
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
231.6
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
230.6
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
227.6
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
227.1
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
222.8
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
219.3
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
218.8
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
218.6
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
217.1
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
214.3
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
213.9
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
212.9
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
210.7
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
209.4
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
206.6
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
206.4
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
206.1
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
205.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
204.7
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
203.9
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
201.7
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
198.3
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
198.0
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
197.8
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
197.7
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
197.5
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
196.2
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
193.7
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
192.8
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
191.2
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
191.0
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
189.2
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
188.3
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
188.1
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
186.8
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
185.8
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
183.3
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
182.8
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
177.9
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
177.3
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
175.3
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
173.7
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
173.5
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
173.5
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
173.2
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
172.5
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
172.2
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
171.9
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
171.3
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
168.7
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
168.1
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
165.6
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
165.5
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
164.8
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
163.9
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
163.4
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
163.0
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
162.9
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
161.3
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
161.2
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
159.7
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
157.3
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
156.2
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
155.2
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
152.7
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
148.1
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
146.8
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
144.8
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
141.6
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
140.3
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
138.5
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
137.4
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
136.1
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
134.5
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
134.4
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
132.9
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
131.6
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
131.2
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
130.9
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
130.3
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
127.0
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
124.1
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
123.5
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
119.3
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
113.8
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
112.9
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
109.8
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
109.3
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
107.3
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
105.9
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
104.7
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
104.7
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
104.4
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
102.7
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
100.8
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
98.8
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
98.5
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
95.7
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
94.4
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
93.7
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
91.6
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
90.4
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
88.4
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
86.6
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
83.4
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
82.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
75.5
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
73.9
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
69.8
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
69.8
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
67.3
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
64.8
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
64.3
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
63.1
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
58.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
56.6
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
51.3
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
50.4
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
49.1
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
46.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
32.6
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
31.5
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
29.3
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
27.6
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
26.7
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
23.9
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RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0079180003
Tumor
0.8
CPT0078660003
Tumor
0.8
CPT0088970003
Tumor
0.6
CPT0069000003
Tumor
0.4
CPT0007860003
Tumor
0.4
CPT0021240003
Tumor
0.4
CPT0066470004
Tumor
0.4
CPT0092160003
Tumor
0.4
CPT0012900004
Tumor
0.3
CPT0065810003
Tumor
0.3
CPT0001180009
Tumor
0.3
CPT0012550003
Tumor
0.3
CPT0017410003
Tumor
0.3
CPT0012640003
Normal
0.3
CPT0000870016
Tumor
0.3
CPT0011410003
Tumor
0.3
CPT0024670003
Tumor
0.3
CPT0079270003
Tumor
0.3
CPT0078510003
Tumor
0.3
CPT0025880003
Tumor
0.3
CPT0077490003
Tumor
0.3
CPT0025290003
Tumor
0.2
CPT0006440003
Tumor
0.2
CPT0015730003
Tumor
0.2
CPT0019990003
Tumor
0.2
CPT0000640003
Tumor
0.2
CPT0009020003
Normal
0.2
CPT0065750003
Tumor
0.2
CPT0092790003
Tumor
0.2
CPT0077310003
Tumor
0.2
CPT0079510001
Normal
0.2
CPT0002270011
Tumor
0.2
CPT0086030003
Tumor
0.2
CPT0006630003
Tumor
0.2
CPT0025580004
Tumor
0.2
CPT0078990003
Tumor
0.2
CPT0078800003
Tumor
0.2
CPT0002350011
Tumor
0.2
CPT0064370003
Tumor
0.2
CPT0001500009
Tumor
0.2
CPT0077110003
Tumor
0.2
CPT0012670003
Tumor
0.2
CPT0001340003
Tumor
0.2
CPT0014450004
Tumor
0.2
CPT0009060003
Tumor
0.2
CPT0025610001
Normal
0.2
CPT0009080003
Normal
0.2
CPT0086360003
Tumor
0.2
CPT0011240003
Tumor
0.2
CPT0079230003
Tumor
0.1
CPT0014160003
Tumor
0.1
CPT0001540009
Tumor
0.1
CPT0025050003
Tumor
0.1
CPT0023690003
Tumor
0.1
CPT0079480003
Tumor
0.1
CPT0092290003
Tumor
0.1
CPT0079300001
Normal
0.1
CPT0065690003
Tumor
0.1
CPT0018250001
Normal
0.1
CPT0071150004
Tumor
0.1
CPT0064400001
Normal
0.1
CPT0020120003
Tumor
0.1
CPT0025230003
Tumor
0.1
CPT0006900003
Tumor
0.1
CPT0014370004
Tumor
0.1
CPT0076330003
Tumor
0.1
CPT0077500001
Normal
0.1
CPT0024680001
Normal
0.1
CPT0065430003
Tumor
0.1
CPT0086870003
Tumor
0.1
CPT0012920003
Normal
0.1
CPT0075560003
Tumor
0.1
CPT0025110003
Tumor
0.1
CPT0086890003
Normal
0.1
CPT0065930003
Tumor
0.1
CPT0069160003
Tumor
0.1
CPT0026410003
Tumor
0.1
CPT0078940001
Normal
0.1
CPT0066480003
Tumor
0.1
CPT0014470001
Normal
0.1
CPT0012280003
Tumor
0.1
CPT0087040003
Tumor
0.1
CPT0001190001
Normal
0.1
CPT0082010001
Normal
0.1
CPT0063330001
Normal
0.1
CPT0076350001
Normal
0.1
CPT0086820003
Tumor
0.1
CPT0086950003
Tumor
0.1
CPT0088690003
Tumor
0.1
CPT0025350003
Tumor
0.1
CPT0012770003
Normal
0.1
CPT0020130001
Normal
0.1
CPT0017450001
Normal
0.1
CPT0023710001
Normal
0.1
CPT0006950001
Normal
0.1
CPT0012570003
Normal
0.1
CPT0078670001
Normal
0.1
CPT0079380003
Tumor
0.1
CPT0081880003
Tumor
0.1
CPT0009000003
Tumor
0.1
CPT0066430001
Normal
0.0
CPT0081620001
Normal
0.0
CPT0012090003
Normal
0.0
CPT0002370001
Normal
0.0
CPT0019160001
Normal
0.0
CPT0065450001
Normal
0.0
CPT0012080003
Tumor
0.0
CPT0025170003
Tumor
0.0
CPT0001230001
Normal
0.0
CPT0088760003
Tumor
0.0
CPT0007870001
Normal
0.0
CPT0079000001
Normal
0.0
CPT0081990003
Tumor
0.0
CPT0020020001
Normal
0.0
CPT0092740003
Normal
0.0
CPT0007320003
Tumor
0.0
CPT0089480003
Normal
0.0
CPT0012370003
Tumor
0.0
CPT0014350001
Normal
0.0
CPT0089460004
Tumor
0.0
CPT0001350001
Normal
0.0
CPT0000660001
Normal
0.0
CPT0069010001
Normal
0.0
CPT0069190001
Normal
0.0
CPT0026420001
Normal
0.0
CPT0006730001
Normal
0.0
CPT0089020003
Tumor
0.0
CPT0092730003
Tumor
0.0
CPT0000890001
Normal
0.0
CPT0010160003
Tumor
0.0
CPT0078830003
Tumor
0.0
CPT0063320003
Tumor
0.0
CPT0001220008
Tumor
0.0
CPT0081600003
Tumor
0.0
CPT0089040001
Normal
0.0
CPT0075130003
Tumor
0.0
CPT0063640001
Normal
0.0
CPT0025920001
Normal
0.0
CPT0079430001
Normal
0.0
CPT0088920001
Normal
0.0
CPT0010120001
Normal
0.0
CPT0001510001
Normal
0.0
CPT0088900003
Tumor
0.0
CPT0088780001
Normal
0.0
CPT0077140001
Normal
0.0
CPT0001260009
Tumor
0.0
CPT0014130001
Normal
0.0
CPT0078930003
Tumor
0.0
CPT0088710001
Normal
-0.1
CPT0010110003
Tumor
-0.1
CPT0084590001
Normal
-0.1
CPT0075570001
Normal
-0.1
CPT0015810003
Tumor
-0.1
CPT0006530001
Normal
-0.1
CPT0063630003
Tumor
-0.1
CPT0087050003
Normal
-0.1
CPT0088640003
Normal
-0.1
CPT0012290003
Normal
-0.1
CPT0066520001
Normal
-0.1
CPT0078840001
Normal
-0.1
CPT0092190003
Normal
-0.1
CPT0010170001
Normal
-0.1
CPT0012180003
Tumor
-0.1
CPT0017850003
Tumor
-0.1
CPT0075170001
Normal
-0.1
CPT0015910003
Tumor
-0.1
CPT0088570001
Normal
-0.1
CPT0023360001
Normal
-0.1
CPT0075720003
Tumor
-0.1
CPT0065820001
Normal
-0.1
CPT0007470001
Normal
-0.1
CPT0025060001
Normal
-0.1
CPT0023350003
Tumor
-0.1
CPT0001550001
Normal
-0.1
CPT0001270001
Normal
-0.1
CPT0013790003
Normal
-0.1
CPT0086370003
Normal
-0.1
CPT0078530001
Normal
-0.1
CPT0085670003
Tumor
-0.1
CPT0088480003
Tumor
-0.1
CPT0088500001
Normal
-0.1
CPT0065870003
Tumor
-0.1
CPT0092800003
Normal
-0.1
CPT0092310003
Normal
-0.1
CPT0079410003
Tumor
-0.1
CPT0019130003
Tumor
-0.1
CPT0086830003
Normal
-0.1
CPT0000790001
Normal
-0.1
CPT0084560003
Tumor
-0.1
CPT0086970003
Normal
-0.1
CPT0088630003
Tumor
-0.1
CPT0077320001
Normal
-0.2
CPT0000780007
Tumor
-0.2
CPT0088550004
Tumor
-0.4
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.