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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RNF130 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
28.9
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
90.5
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
57.2
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
55.5
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
48.9
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
48.8
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
48.5
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
48.0
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
47.7
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
46.7
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
46.6
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
46.6
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
46.4
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
45.5
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
44.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
43.6
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
38.5
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
38.2
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
38.0
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
37.8
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
37.5
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
35.3
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
34.6
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
33.6
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
33.5
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
32.7
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
32.3
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
30.1
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
28.9
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
28.7
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
28.5
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
28.4
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
27.2
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
27.2
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
26.3
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
25.7
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
25.6
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
25.2
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
24.9
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
24.7
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
24.5
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
23.7
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
23.4
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
23.3
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
22.4
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
21.7
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
21.4
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
20.3
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
19.1
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
17.4
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
16.9
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
15.8
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
12.4
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
12.1
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
11.9
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
11.9
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
11.6
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
11.0
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
10.8
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
10.3
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
2.2
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
1.1
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
0.4
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
0.3
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RNF130 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
69.3
Number of samples
521
Samples
Sample
Description
TPM
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
145.7
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
131.0
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
131.0
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
125.6
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
123.6
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
123.6
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
121.0
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
120.7
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
117.6
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
116.7
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
114.4
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
114.3
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
113.7
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
112.6
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
112.2
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
111.6
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
110.5
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
106.6
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
106.6
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
106.6
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
106.5
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
106.3
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
105.4
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
104.3
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
103.9
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
103.7
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
103.5
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
103.3
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
102.7
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
102.6
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
102.6
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
102.4
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
102.0
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
101.8
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
101.7
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
101.0
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
100.8
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
100.8
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
100.6
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
100.5
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
100.0
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
99.8
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
99.4
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
98.8
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
98.8
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
98.4
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
98.3
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
98.0
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
97.8
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
97.8
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
97.3
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
97.0
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
96.9
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
96.7
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
95.7
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
94.8
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
94.8
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
94.8
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
94.7
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
94.4
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
94.3
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
93.8
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
93.7
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
93.7
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
93.4
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
93.3
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
91.7
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
91.4
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
91.1
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
91.0
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
91.0
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
90.6
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
90.5
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
90.3
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
90.2
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
90.1
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
90.0
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
89.9
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
89.9
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
89.9
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
89.9
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
89.6
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
89.5
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
89.1
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
89.0
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
89.0
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
88.6
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
88.6
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
88.0
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
87.9
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
87.9
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
87.8
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
87.3
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
87.2
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
87.1
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
87.0
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
86.9
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
86.9
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
86.5
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
86.4
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
86.3
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
86.2
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
86.0
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
85.9
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
85.7
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
85.6
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
85.5
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
85.5
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
85.4
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
85.4
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
85.4
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
85.2
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
85.2
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
85.1
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
84.7
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
84.6
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
84.5
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
84.2
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
84.2
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
84.2
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
84.0
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
83.9
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
83.7
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
83.7
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
83.7
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
83.6
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
83.5
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
83.3
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
83.1
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
83.1
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
83.1
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
83.0
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
83.0
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
82.9
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
82.7
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
82.6
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
82.6
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
82.4
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
82.4
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
82.3
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
82.2
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
82.1
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
81.9
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
81.9
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
81.7
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
81.5
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
81.4
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
81.3
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
81.2
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
80.9
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
80.8
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
80.7
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
80.7
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
80.6
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
80.6
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
80.4
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
80.4
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
80.3
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
80.3
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
79.8
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
79.5
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
79.5
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
79.5
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
79.3
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
79.3
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
79.1
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
79.1
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
79.0
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
79.0
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
78.8
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
78.7
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
78.3
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
78.3
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
78.3
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
78.3
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
78.2
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
78.1
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
78.0
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
78.0
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
78.0
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
77.9
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
77.8
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
77.8
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
77.7
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
77.7
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
77.7
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
77.3
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
77.3
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
77.2
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
77.0
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
76.9
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
76.6
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
76.5
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
76.4
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
76.3
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
76.3
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
76.3
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
76.3
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
75.8
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
75.8
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
75.4
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
75.4
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
75.4
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
75.4
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
75.3
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
75.2
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
75.1
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
75.1
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
74.9
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
74.9
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
74.9
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
74.6
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
74.4
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
74.3
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
74.2
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
74.2
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
73.9
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
73.7
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
73.7
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
73.6
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
73.5
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
73.5
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
73.4
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
73.4
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
73.4
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
73.3
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
73.2
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
73.1
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
73.1
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
73.0
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
72.9
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
72.7
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
72.7
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
72.6
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
72.5
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
72.4
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
72.4
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
72.3
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
72.2
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
72.1
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
72.1
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
72.0
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
71.5
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
71.1
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
70.9
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
70.8
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
70.6
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
70.6
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
70.5
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
70.5
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
70.5
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
70.4
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
70.3
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
70.3
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
70.3
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
70.0
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
69.8
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
69.8
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
69.8
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
69.6
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
69.6
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
69.5
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
69.5
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
69.4
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
69.3
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
69.3
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
69.2
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
69.2
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
69.2
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
68.7
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
68.7
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
68.6
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
68.6
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
68.5
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
68.4
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
68.4
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
68.3
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
68.3
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
68.2
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
68.2
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
68.1
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
68.0
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
67.9
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
67.8
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
67.7
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
67.6
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
67.5
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
67.4
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
67.4
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
67.4
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
67.2
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
67.2
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
67.2
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
67.1
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
67.0
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
66.8
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
66.7
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
66.7
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
66.7
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
66.5
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
66.4
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
66.3
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
66.1
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
66.1
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
66.0
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
66.0
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
65.9
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
65.8
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
65.7
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
65.7
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
65.5
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
65.4
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
65.3
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
65.3
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
65.1
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
65.1
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
65.1
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
65.1
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
65.1
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
64.8
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
64.8
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
64.7
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
64.6
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
64.4
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
64.3
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
64.3
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
64.0
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
64.0
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
64.0
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
63.9
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
63.7
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
63.6
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
63.4
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
63.1
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
63.0
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
62.9
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
62.9
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
62.8
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
62.7
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
62.5
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
62.3
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
62.1
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
62.1
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
62.0
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
61.9
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
61.9
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
61.8
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
61.8
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
61.6
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
61.4
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
61.4
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
61.4
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
61.3
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
61.3
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
61.0
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
60.7
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
60.7
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
60.5
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
60.5
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
60.5
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
60.1
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
59.9
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
59.9
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
59.8
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
59.7
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
59.7
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
59.6
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
59.3
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
59.2
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
59.2
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
58.8
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
58.8
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
58.7
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
58.7
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
58.3
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
58.1
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
58.1
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
58.1
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
58.0
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
57.9
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
57.9
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
57.9
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
57.8
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
57.6
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
57.6
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
57.5
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
57.5
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
57.4
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
57.2
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
56.9
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
56.8
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
56.7
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
56.7
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
56.7
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
56.6
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
56.6
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
56.3
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
55.3
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
55.3
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
55.2
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
55.0
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
54.9
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
54.5
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
54.5
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
54.4
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
54.3
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
54.1
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
54.1
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
53.9
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
53.8
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
53.7
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
53.6
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
53.4
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
53.4
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
53.1
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
52.7
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
52.6
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
52.3
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
52.3
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
52.1
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
52.0
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
52.0
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
51.9
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
51.8
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
51.4
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
51.4
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
51.4
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
51.0
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
50.6
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
50.5
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
50.4
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
50.3
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
50.3
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
50.1
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
49.7
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
49.6
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
49.2
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
49.0
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
49.0
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
48.4
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
48.0
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
47.7
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
47.7
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
47.0
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
47.0
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
46.9
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
46.6
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
46.4
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
46.4
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
45.5
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
45.2
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
44.8
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
44.8
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
44.7
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
44.6
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
44.2
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
44.1
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
43.5
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
43.3
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
41.9
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
41.6
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
41.6
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
41.4
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
41.2
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
41.1
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
41.0
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
40.7
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
40.4
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
40.4
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
40.3
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
40.1
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
39.6
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
39.4
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
39.1
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
38.9
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
38.9
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
38.7
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
38.5
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
37.6
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
37.3
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
37.3
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
37.0
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
36.8
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
36.4
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
36.2
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
36.0
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
36.0
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
34.8
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
34.3
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
33.8
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
33.6
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
32.3
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
31.6
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
31.0
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
30.9
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
29.9
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
29.5
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
28.8
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
27.9
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
27.9
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
27.3
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
27.2
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
26.7
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
26.2
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
22.3
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
22.0
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
21.0
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
21.0
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
21.0
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
20.5
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
20.1
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
20.1
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
19.2
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
17.8
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
15.9
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
14.9
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
14.6
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
13.0
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
11.9
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
10.4
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RNF130 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
86.8
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
167.6
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
157.2
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
136.0
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
126.4
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
125.7
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
125.5
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
123.0
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
116.3
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
115.7
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
115.2
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
115.0
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
112.4
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
112.0
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
111.8
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
109.5
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
109.5
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
108.3
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
108.1
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
107.6
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
106.6
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
105.5
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
105.1
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
104.8
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
104.6
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
104.2
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
103.9
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
102.7
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
101.9
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
101.3
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
98.4
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
98.1
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
97.7
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
97.3
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
96.9
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
95.9
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
95.9
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
95.2
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
93.8
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
93.6
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
93.2
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
91.7
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
91.2
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
90.8
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
87.5
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
86.6
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
86.0
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
85.8
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
85.5
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
84.6
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
84.5
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
84.3
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
84.2
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
84.1
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
83.6
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
83.5
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
83.5
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
82.4
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
82.3
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
80.9
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
80.7
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
79.7
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
79.4
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
78.9
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
78.9
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
78.8
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
77.9
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
77.5
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
77.3
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
76.6
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
75.4
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
75.1
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
74.0
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
73.2
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
72.4
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
71.3
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
69.1
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
68.2
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
67.8
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
67.7
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
67.3
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
67.3
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
66.5
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
64.4
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
64.4
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
64.1
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
61.1
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
60.4
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
59.8
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
57.6
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
55.6
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
55.3
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
54.5
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
53.8
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
53.8
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
52.4
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
47.7
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
46.3
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
42.7
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
35.8
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RNF130 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
52.8
Number of samples
282
Samples
Sample
Description
TPM
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
131.0
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
120.0
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
117.7
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
113.4
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
109.5
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
109.0
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
108.3
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
107.0
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
106.0
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
102.9
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
101.7
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
101.2
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
99.9
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
97.0
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
95.9
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
95.5
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
94.3
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
94.1
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
92.7
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
92.3
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
91.2
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
91.0
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
90.2
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
90.0
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
89.3
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
89.2
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
87.0
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
86.5
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
86.3
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
85.5
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
84.5
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
84.2
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
83.8
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
83.8
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
83.6
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
83.3
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
83.2
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
83.2
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
82.2
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
81.9
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
81.8
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
80.6
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
80.4
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
80.4
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
80.3
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
79.7
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
78.7
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
78.6
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
78.5
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
78.1
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
78.0
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
78.0
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
77.4
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
76.8
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
76.6
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
76.3
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
75.6
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
75.3
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
75.3
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
75.1
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
73.8
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
73.5
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
71.9
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
71.8
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
71.4
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
71.2
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
71.2
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
71.2
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
70.8
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
70.6
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
69.7
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
69.6
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
69.2
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
68.1
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
67.4
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
67.4
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
66.8
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
66.7
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
65.9
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
65.7
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
65.7
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
65.6
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
65.6
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
65.6
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
65.2
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
65.0
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
63.9
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
63.8
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
63.7
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
63.6
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
63.5
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
62.7
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
62.6
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
61.9
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
61.8
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
61.7
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
61.1
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
61.0
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
60.0
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
59.9
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
59.8
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
59.4
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
59.2
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
58.9
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
58.8
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
58.5
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
58.2
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
58.2
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
58.1
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
58.0
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
58.0
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
57.4
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
57.3
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
56.8
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
55.7
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
55.7
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
55.4
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
54.8
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
54.7
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
54.7
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
54.6
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
54.5
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
53.9
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
53.9
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
53.7
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
53.5
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
53.5
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
53.4
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
53.3
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
53.3
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
53.2
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
52.8
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
52.4
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
52.4
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
52.2
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
51.8
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
51.7
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
51.6
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
51.1
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
50.8
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
50.8
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
50.7
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
50.5
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
50.4
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
50.4
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
49.7
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
49.6
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
49.5
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
49.4
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
49.2
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
49.1
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
48.8
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
48.8
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
48.7
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
48.6
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
48.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
47.9
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
47.5
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
47.5
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
47.2
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
47.1
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
47.0
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
47.0
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
46.7
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
46.5
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
46.4
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
46.1
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
45.6
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
45.6
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
45.3
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
45.0
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
45.0
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
44.8
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
44.7
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
44.4
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
44.3
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
44.2
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
43.9
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
43.8
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
43.5
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
42.8
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
42.6
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
42.6
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
42.4
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
42.3
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
42.3
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
42.0
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
42.0
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
41.9
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
41.7
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
41.3
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
41.3
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
41.2
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
41.2
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
41.2
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
41.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
40.8
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
40.4
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
40.0
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
39.5
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
39.3
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
39.0
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
38.5
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
38.3
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
38.3
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
37.2
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
36.9
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
36.8
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
36.6
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
36.6
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
35.9
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
35.7
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
35.6
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
35.4
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
35.4
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
35.3
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
35.2
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
34.9
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
34.6
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
34.2
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
34.1
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
33.9
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
33.9
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
33.8
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
33.7
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
33.6
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
33.3
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
33.2
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
32.9
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
32.5
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
32.3
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
32.0
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
31.7
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
31.7
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
31.5
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
30.9
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
29.8
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
29.6
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
29.2
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
28.2
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
27.5
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
27.0
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
26.9
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
26.8
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
25.4
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
25.2
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
24.8
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
24.3
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
23.3
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
22.7
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
22.4
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
22.1
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
21.9
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
20.0
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
19.5
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
19.0
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
18.3
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
18.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
18.0
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
16.1
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
15.9
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
15.9
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
15.7
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
14.1
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
13.5
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
9.8
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
9.4
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
8.4
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
8.3
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
7.8
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
7.4
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
7.4
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
2.5
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
1.7
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
1.1
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
0.7
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
0.6
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
0.0
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
0.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
0.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
0.0
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0026410003
Tumor
N/A
CPT0002370001
Normal
N/A
CPT0000790001
Normal
N/A
CPT0019130003
Tumor
N/A
CPT0088570001
Normal
N/A
CPT0065820001
Normal
N/A
CPT0025880003
Tumor
N/A
CPT0076330003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0078800003
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0078930003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0084560003
Tumor
N/A
CPT0012670003
Tumor
N/A
CPT0002350011
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0064370003
Tumor
N/A
CPT0088900003
Tumor
N/A
CPT0006730001
Normal
N/A
CPT0007870001
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0079380003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0012640003
Normal
N/A
CPT0078830003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0089020003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0092790003
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0063330001
Normal
N/A
CPT0001350001
Normal
N/A
CPT0078940001
Normal
N/A
CPT0086830003
Normal
N/A
CPT0088760003
Tumor
N/A
CPT0092190003
Normal
N/A
CPT0002270011
Tumor
N/A
CPT0088550004
Tumor
N/A
CPT0023710001
Normal
N/A
CPT0077140001
Normal
N/A
CPT0025230003
Tumor
N/A
CPT0025050003
Tumor
N/A
CPT0075720003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0089040001
Normal
N/A
CPT0017850003
Tumor
N/A
CPT0019990003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0001510001
Normal
N/A
CPT0078840001
Normal
N/A
CPT0010110003
Tumor
N/A
CPT0086890003
Normal
N/A
CPT0092290003
Tumor
N/A
CPT0020120003
Tumor
N/A
CPT0088640003
Normal
N/A
CPT0088500001
Normal
N/A
CPT0069010001
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0063630003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0014350001
Normal
N/A
CPT0014470001
Normal
N/A
CPT0086360003
Tumor
N/A
CPT0069160003
Tumor
N/A
CPT0006950001
Normal
N/A
CPT0007860003
Tumor
N/A
CPT0082010001
Normal
N/A
CPT0079230003
Tumor
N/A
CPT0001340003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0012080003
Tumor
N/A
CPT0084590001
Normal
N/A
CPT0063640001
Normal
N/A
CPT0009000003
Tumor
N/A
CPT0010170001
Normal
N/A
CPT0079270003
Tumor
N/A
CPT0069190001
Normal
N/A
CPT0001270001
Normal
N/A
CPT0015810003
Tumor
N/A
CPT0025110003
Tumor
N/A
CPT0024680001
Normal
N/A
CPT0012090003
Normal
N/A
CPT0009020003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0077490003
Tumor
N/A
CPT0014160003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0020020001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0001500009
Tumor
N/A
CPT0081600003
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0088630003
Tumor
N/A
CPT0069000003
Tumor
N/A
CPT0088710001
Normal
N/A
CPT0092160003
Tumor
N/A
CPT0006630003
Tumor
N/A
CPT0001260009
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0012180003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0075570001
Normal
N/A
CPT0014130001
Normal
N/A
CPT0078510003
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0079000001
Normal
N/A
CPT0092800003
Normal
N/A
CPT0006900003
Tumor
N/A
CPT0015910003
Tumor
N/A
CPT0020130001
Normal
N/A
CPT0089480003
Normal
N/A
CPT0007470001
Normal
N/A
CPT0064400001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0092730003
Tumor
N/A
CPT0077110003
Tumor
N/A
CPT0086030003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0018250001
Normal
N/A
CPT0017450001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0077500001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0006530001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0019160001
Normal
N/A
CPT0081620001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0078670001
Normal
N/A
CPT0089460004
Tumor
N/A
CPT0007320003
Tumor
N/A
CPT0088690003
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0025920001
Normal
N/A
CPT0076350001
Normal
N/A
CPT0015730003
Tumor
N/A
CPT0025350003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0012280003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0079410003
Tumor
N/A
CPT0075560003
Tumor
N/A
CPT0001230001
Normal
N/A
CPT0079510001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0078990003
Tumor
N/A
CPT0065810003
Tumor
N/A
CPT0010120001
Normal
N/A
CPT0086870003
Tumor
N/A
CPT0075170001
Normal
N/A
CPT0000640003
Tumor
N/A
CPT0065870003
Tumor
N/A
CPT0088780001
Normal
N/A
CPT0086970003
Normal
N/A
CPT0079300001
Normal
N/A
CPT0092740003
Normal
N/A
CPT0085670003
Tumor
N/A
CPT0081880003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0012290003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0023690003
Tumor
N/A
CPT0001220008
Tumor
N/A
CPT0088480003
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0079430001
Normal
N/A
CPT0000890001
Normal
N/A
CPT0086370003
Normal
N/A
CPT0025580004
Tumor
N/A
CPT0081990003
Tumor
N/A
CPT0025060001
Normal
N/A
CPT0075130003
Tumor
N/A
CPT0000660001
Normal
N/A
CPT0086820003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
