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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PFDN1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
48.1
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
92.1
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
90.7
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
83.9
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
82.5
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
81.2
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
81.0
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
80.9
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
75.8
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
74.2
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
72.8
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
71.8
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
71.3
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
66.6
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
64.5
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
63.3
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
62.4
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
62.4
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
62.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
61.3
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
61.3
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
61.2
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
59.7
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
59.5
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
58.1
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
57.8
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
57.1
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
56.9
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
54.4
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
53.0
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
46.9
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
46.7
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
46.7
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
46.3
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
46.2
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
45.4
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
44.5
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
43.3
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
41.5
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
40.3
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
40.1
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
40.0
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
39.9
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
39.0
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
37.4
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
37.2
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
36.9
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
36.1
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
33.8
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
31.5
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
29.5
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
28.8
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
28.5
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
28.4
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
27.3
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
24.6
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
19.6
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
18.8
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
16.5
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
15.8
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
15.3
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
11.5
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
9.9
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
7.8
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PFDN1 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
75.5
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
206.0
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
137.9
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
135.7
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
126.6
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
126.4
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
124.8
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
124.5
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
123.0
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
122.7
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
122.0
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
120.8
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
120.3
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
120.1
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
119.5
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
119.1
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
118.4
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
117.8
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
116.7
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
113.9
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
113.5
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
113.1
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
112.5
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
111.9
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
110.9
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
110.2
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
109.9
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
109.8
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
109.2
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
109.2
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
108.0
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
108.0
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
107.8
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
107.7
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
107.3
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
107.0
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
106.8
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
106.6
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
106.3
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
106.2
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
106.1
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
106.1
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
106.1
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
106.1
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
104.3
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
104.2
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
104.1
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
104.0
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
103.9
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
103.5
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
103.2
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
102.9
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
102.6
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
102.5
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
102.4
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
102.2
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
102.0
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
101.8
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
101.6
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
101.5
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
101.2
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
101.1
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
101.0
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
100.6
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
100.4
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
100.0
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
99.8
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
99.8
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
99.3
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
98.8
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
98.8
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
98.4
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
98.4
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
98.3
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
98.0
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
97.4
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
97.0
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
96.8
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
96.5
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
96.4
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
96.3
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
96.0
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
95.7
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
95.4
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
95.1
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
95.0
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
94.9
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
94.9
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
94.8
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
94.8
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
94.8
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
94.2
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
94.1
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
94.0
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
93.8
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
93.8
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
93.5
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
93.4
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
93.3
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
93.2
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
92.9
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
92.5
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
92.5
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
92.5
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
92.4
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
92.0
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
91.8
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
91.6
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
91.5
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
91.2
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
91.1
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
91.1
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
91.0
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
91.0
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
91.0
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
90.5
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
90.5
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
90.4
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
90.1
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
89.9
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
89.8
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
89.7
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
89.3
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
89.3
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
89.0
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
89.0
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
89.0
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
88.9
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
88.5
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
88.4
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
88.3
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
88.3
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
88.2
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
87.8
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
87.8
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
87.6
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
87.6
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
86.9
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
86.8
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
86.5
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
86.5
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
86.4
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
86.4
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
86.3
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
86.3
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
86.2
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
86.1
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
86.1
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
86.1
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
86.0
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
85.9
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
85.6
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
85.6
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
85.6
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
85.6
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
85.1
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
85.1
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
85.0
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
84.9
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
84.9
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
84.8
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
84.7
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
84.7
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
84.3
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
84.3
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
84.2
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
84.1
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
84.1
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
84.0
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
83.7
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
83.6
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
83.5
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
83.4
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
83.3
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
83.0
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
83.0
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
82.7
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
82.7
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
82.7
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
82.5
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
82.4
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
82.4
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
82.2
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
82.0
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
82.0
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
82.0
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
81.9
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
81.9
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
81.7
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
81.5
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
81.4
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
81.4
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
81.4
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
81.4
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
81.3
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
81.3
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
81.2
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
81.2
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
81.1
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
80.6
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
80.4
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
80.4
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
80.3
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
80.2
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
80.1
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
80.1
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
79.9
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
79.8
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
79.7
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
79.3
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
79.0
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
78.8
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
78.7
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
78.6
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
78.6
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
78.5
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
78.4
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
78.4
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
78.4
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
78.4
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
78.3
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
78.2
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
78.1
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
78.1
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
78.0
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
77.9
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
77.8
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
77.5
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
77.5
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
77.4
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
77.4
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
77.1
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
77.0
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
76.7
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
76.6
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
76.6
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
76.6
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
76.6
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
76.5
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
76.4
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
75.9
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
75.9
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
75.8
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
75.8
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
75.7
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
75.6
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
75.5
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
75.4
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
75.4
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
75.3
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
75.3
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
75.3
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
75.2
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
75.0
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
74.6
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
74.5
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
74.3
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
74.3
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
74.2
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
73.8
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
73.8
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
73.8
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
73.7
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
73.7
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
73.5
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
73.4
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
73.3
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
73.2
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
73.1
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
73.0
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
73.0
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
72.8
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
72.7
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
72.6
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
72.6
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
72.5
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
72.5
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
72.4
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
72.4
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
72.4
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
72.4
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
72.4
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
72.2
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
72.1
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
71.9
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
71.9
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
71.8
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
71.8
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
71.8
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
71.8
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
71.8
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
71.7
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
71.7
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
71.7
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
71.5
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
71.5
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
71.3
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
71.3
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
71.3
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
71.3
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
71.2
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
71.2
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
71.1
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
71.0
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
70.9
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
70.8
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
70.7
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
70.7
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
70.3
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
70.3
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
70.2
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
70.2
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
70.1
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
69.9
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
69.8
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
69.7
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
69.6
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
69.4
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
69.4
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
69.3
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
69.3
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
69.1
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
69.1
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
69.0
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
69.0
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
69.0
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
68.9
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
68.9
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
68.8
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
68.6
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
68.4
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
68.3
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
68.2
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
68.2
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
68.0
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
67.9
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
67.8
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
67.8
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
67.8
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
67.8
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
67.7
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
67.7
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
67.6
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
67.5
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
67.5
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
67.4
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
67.4
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
67.3
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
67.2
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
67.2
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
67.1
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
67.1
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
66.7
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
66.7
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
66.6
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
66.6
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
66.6
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
66.5
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
66.5
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
66.2
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
66.0
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
66.0
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
66.0
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
65.8
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
65.7
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
65.2
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
65.1
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
64.9
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
64.8
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
64.8
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
64.7
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
64.6
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
64.3
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
63.9
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
63.7
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
63.7
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
63.4
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
63.3
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
62.7
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
62.6
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
62.6
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
62.6
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
62.6
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
62.4
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
62.4
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
62.4
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
62.1
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
62.1
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
62.0
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
61.9
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
61.6
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
61.6
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
61.5
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
61.5
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
61.4
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
61.3
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
61.1
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
60.9
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
60.8
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
60.6
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
60.6
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
60.5
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
60.5
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
60.5
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
60.5
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
60.4
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
60.2
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
59.7
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
59.7
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
59.6
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
59.6
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
59.4
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
59.2
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
59.1
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
59.0
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
58.9
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
58.8
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
58.7
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
58.5
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
58.4
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
58.3
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
58.3
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
58.2
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
58.1
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
58.0
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
58.0
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
57.9
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
57.6
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
57.6
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
57.3
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
56.9
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
56.9
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
56.8
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
56.7
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
56.7
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
56.5
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
56.1
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
55.8
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
55.6
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
55.6
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
55.6
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
55.2
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
55.1
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
55.1
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
54.8
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
54.8
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
54.6
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
54.5
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
54.4
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
54.2
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
54.1
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
54.1
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
54.1
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
53.8
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
53.7
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
53.4
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
53.4
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
53.3
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
53.2
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
53.0
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
53.0
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
52.9
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
52.8
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
52.4
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
51.8
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
51.8
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
51.7
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
51.6
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
51.3
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
50.9
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
50.2
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
50.0
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
49.8
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
49.6
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
49.6
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
49.3
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
48.9
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
48.9
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
48.6
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
48.2
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
47.9
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
47.8
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
47.3
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
46.8
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
46.7
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
46.7
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
46.1
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
46.0
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
45.8
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
45.0
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
44.4
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
44.3
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
43.1
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
42.8
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
42.7
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
42.5
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
41.8
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
41.8
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
41.7
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
41.7
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
41.7
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
41.1
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
40.6
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
40.0
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
39.9
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
39.0
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
38.2
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
35.1
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
34.9
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
34.4
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
33.8
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
33.5
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
32.7
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
31.7
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
31.3
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
28.6
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
28.6
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
27.9
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
23.4
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
20.4
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
18.9
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PFDN1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
71.9
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
112.8
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
112.6
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
112.4
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
111.3
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
111.2
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
108.4
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
105.5
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
99.0
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
95.4
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
93.5
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
93.0
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
93.0
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
92.8
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
92.4
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
90.9
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
90.5
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
89.8
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
89.7
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
89.0
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
88.3
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
88.0
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
87.0
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
86.6
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
85.9
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
85.6
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
84.6
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
84.1
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
83.4
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
83.4
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
80.3
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
80.0
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
79.6
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
77.2
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
76.2
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
75.3
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
75.3
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
75.2
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
74.7
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
74.7
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
74.5
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
74.3
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
73.1
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
72.7
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
72.7
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
71.2
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
70.1
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
70.0
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
69.9
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
69.7
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
69.0
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
68.7
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
68.6
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
68.3
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
68.0
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
67.9
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
67.7
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
67.0
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
65.6
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
65.4
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
65.3
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
65.1
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
64.0
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
63.6
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
63.5
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
63.3
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
63.2
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
62.3
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
62.0
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
61.9
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
61.9
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
61.8
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
61.7
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
61.5
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
60.9
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
60.5
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
58.6
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
58.6
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
58.1
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
57.9
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
57.3
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
57.1
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
56.7
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
56.4
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
56.3
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
56.2
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
55.7
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
55.6
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
55.5
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
54.7
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
54.0
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
53.5
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
51.6
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
50.5
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
48.8
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
47.5
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
42.9
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
42.2
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
40.9
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
34.7
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PFDN1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
64.7
Number of samples
282
Samples
Sample
Description
TPM
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
154.4
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
148.5
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
142.6
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
136.1
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
134.0
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
132.0
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
129.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
128.0
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
126.6
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
126.0
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
122.1
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
121.9
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
119.6
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
118.3
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
114.4
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
113.2
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
110.6
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
108.7
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
108.4
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
108.2
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
107.0
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
106.8
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
106.3
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
105.5
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
101.8
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
100.4
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
99.2
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
98.7
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
97.7
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
96.5
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
96.1
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
95.9
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
95.8
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
95.6
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
94.4
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
94.1
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
93.5
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
93.1
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
93.0
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
92.7
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
92.0
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
91.8
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
91.7
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
91.1
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
90.8
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
90.2
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
89.9
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
89.9
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
89.5
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
89.5
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
89.4
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
87.0
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
85.8
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
85.2
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
84.9
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
84.8
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
84.5
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
83.3
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
83.1
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
83.0
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
82.8
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
82.5
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
82.4
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
82.2
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
82.0
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
81.8
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
81.6
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
79.7
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
79.7
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
79.5
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
78.5
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
77.9
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
77.9
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
77.8
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
77.6
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
77.6
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
76.6
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
76.2
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
75.3
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
75.3
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
75.0
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
74.9
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
74.7
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
74.6
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
74.5
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
74.4
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
74.4
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
73.8
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
73.5
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
73.4
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
73.3
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
73.2
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
72.9
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
72.6
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
72.0
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
72.0
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
71.7
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
71.5
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
71.2
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
71.1
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
71.1
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
71.1
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
70.8
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
70.5
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
70.4
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
69.8
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
69.7
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
69.6
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
69.5
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
69.3
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
69.2
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
69.0
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
68.9
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
68.7
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
68.6
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
68.5
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
68.5
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
68.1
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
68.1
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
68.0
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
67.9
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
67.8
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
67.7
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
67.4
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
67.4
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
67.4
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
67.2
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
66.9
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
66.9
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
66.7
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
66.6
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
66.5
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
66.2
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
65.7
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
65.4
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
65.0
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
64.9
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
64.7
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
64.4
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
64.3
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
64.2
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
63.5
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
63.3
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
63.3
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
63.3
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
63.2
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
63.0
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
62.9
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
62.7
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
62.7
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
62.4
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
62.1
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
61.8
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
61.8
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
61.7
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
61.6
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
61.5
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
61.5
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
61.4
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
60.6
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
60.4
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
59.6
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
59.0
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
58.9
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
58.8
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
58.7
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
58.4
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
58.3
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
58.2
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
58.1
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
57.8
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
57.7
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
57.7
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
57.6
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
56.7
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
56.3
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
56.0
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
55.9
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
55.8
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
55.7
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
55.2
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
55.0
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
54.9
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
54.9
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
54.9
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
54.6
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
54.5
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
54.1
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
53.7
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
53.4
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
52.4
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
52.3
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
52.3
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
51.9
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
51.8
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
51.5
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
51.4
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
51.1
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
51.0
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
50.9
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
50.8
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
50.6
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
50.5
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
50.2
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
50.0
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
49.7
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
49.0
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
48.8
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
48.6
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
48.5
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
48.3
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
47.9
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
47.2
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
47.1
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
46.8
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
46.5
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
46.4
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
45.6
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
45.5
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
45.1
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
44.2
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
43.9
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
43.8
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
43.7
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
43.6
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
43.3
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
42.7
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
42.6
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
42.4
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
42.3
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
42.0
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
41.6
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
41.5
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
41.3
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
40.8
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
40.3
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
40.0
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
39.8
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
39.3
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
38.8
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
38.6
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
37.9
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
37.4
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
37.3
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
37.2
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
37.1
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
36.7
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
36.6
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
36.5
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
36.1
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
36.0
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
33.1
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
32.3
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
32.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
31.9
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
31.5
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
28.6
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
28.0
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
27.7
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
26.9
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
26.0
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
25.3
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
22.9
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
22.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
21.8
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
20.7
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
20.3
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
20.2
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
17.6
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
17.1
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
14.9
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
12.3
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
12.2
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
11.9
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
11.8
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
11.6
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
11.5
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
6.5
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
4.3
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
0.0
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
0.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0000640003
Tumor
1.0
CPT0002350011
Tumor
0.9
CPT0001340003
Tumor
0.9
CPT0088970003
Tumor
0.9
CPT0025880003
Tumor
0.8
CPT0078660003
Tumor
0.8
CPT0015810003
Tumor
0.7
CPT0077490003
Tumor
0.7
CPT0006440003
Tumor
0.7
CPT0001540009
Tumor
0.6
CPT0015730003
Tumor
0.6
CPT0086950003
Tumor
0.6
CPT0001180009
Tumor
0.6
CPT0063630003
Tumor
0.6
CPT0079480003
Tumor
0.6
CPT0085670003
Tumor
0.6
CPT0081880003
Tumor
0.6
CPT0025050003
Tumor
0.5
CPT0019990003
Tumor
0.5
CPT0076330003
Tumor
0.5
CPT0088690003
Tumor
0.5
CPT0023350003
Tumor
0.5
CPT0000780007
Tumor
0.5
CPT0012280003
Tumor
0.5
CPT0025110003
Tumor
0.5
CPT0025350003
Tumor
0.5
CPT0075130003
Tumor
0.5
CPT0079410003
Tumor
0.5
CPT0065930003
Tumor
0.5
CPT0088900003
Tumor
0.4
CPT0025230003
Tumor
0.4
CPT0078990003
Tumor
0.4
CPT0026410003
Tumor
0.4
CPT0088550004
Tumor
0.4
CPT0086030003
Tumor
0.4
CPT0001260009
Tumor
0.4
CPT0089460004
Tumor
0.4
CPT0020120003
Tumor
0.4
CPT0021240003
Tumor
0.4
CPT0065430003
Tumor
0.4
CPT0075560003
Tumor
0.4
CPT0010160003
Tumor
0.4
CPT0078830003
Tumor
0.4
CPT0086820003
Tumor
0.4
CPT0077110003
Tumor
0.4
CPT0006630003
Tumor
0.3
CPT0089020003
Tumor
0.3
CPT0086360003
Tumor
0.3
CPT0092790003
Tumor
0.3
CPT0079380003
Tumor
0.3
CPT0014450004
Tumor
0.3
CPT0092290003
Tumor
0.3
CPT0007860003
Tumor
0.3
CPT0088760003
Tumor
0.3
CPT0071150004
Tumor
0.3
CPT0017410003
Tumor
0.3
CPT0075720003
Tumor
0.3
CPT0019130003
Tumor
0.3
CPT0065750003
Tumor
0.3
CPT0079270003
Tumor
0.3
CPT0025580004
Tumor
0.2
CPT0002270011
Tumor
0.2
CPT0010110003
Tumor
0.2
CPT0012080003
Tumor
0.2
CPT0081600003
Tumor
0.2
CPT0000870016
Tumor
0.2
CPT0064370003
Tumor
0.2
CPT0079430001
Normal
0.2
CPT0079230003
Tumor
0.2
CPT0066480003
Tumor
0.2
CPT0087040003
Tumor
0.2
CPT0077310003
Tumor
0.2
CPT0006900003
Tumor
0.2
CPT0088480003
Tumor
0.2
CPT0092190003
Normal
0.1
CPT0078930003
Tumor
0.1
CPT0065870003
Tumor
0.1
CPT0007320003
Tumor
0.1
CPT0025170003
Tumor
0.1
CPT0009000003
Tumor
0.1
CPT0012180003
Tumor
0.1
CPT0001500009
Tumor
0.1
CPT0025290003
Tumor
0.1
CPT0063320003
Tumor
0.1
CPT0012670003
Tumor
0.1
CPT0065810003
Tumor
0.1
CPT0014160003
Tumor
0.1
CPT0079510001
Normal
0.1
CPT0012550003
Tumor
0.1
CPT0001190001
Normal
0.1
CPT0088630003
Tumor
0.0
CPT0065690003
Tumor
0.0
CPT0066470004
Tumor
0.0
CPT0086870003
Tumor
0.0
CPT0007870001
Normal
0.0
CPT0012640003
Normal
0.0
CPT0001220008
Tumor
0.0
CPT0010120001
Normal
0.0
CPT0075570001
Normal
0.0
CPT0001350001
Normal
0.0
CPT0025060001
Normal
0.0
CPT0087050003
Normal
0.0
CPT0009060003
Tumor
0.0
CPT0023360001
Normal
0.0
CPT0006730001
Normal
0.0
CPT0012370003
Tumor
0.0
CPT0024670003
Tumor
0.0
CPT0079300001
Normal
0.0
CPT0078800003
Tumor
0.0
CPT0002370001
Normal
0.0
CPT0012900004
Tumor
0.0
CPT0014370004
Tumor
0.0
CPT0007470001
Normal
0.0
CPT0001270001
Normal
0.0
CPT0077320001
Normal
0.0
CPT0000890001
Normal
0.0
CPT0065820001
Normal
0.0
CPT0086830003
Normal
-0.1
CPT0063640001
Normal
-0.1
CPT0092800003
Normal
-0.1
CPT0082010001
Normal
-0.1
CPT0092740003
Normal
-0.1
CPT0079000001
Normal
-0.1
CPT0084590001
Normal
-0.1
CPT0014130001
Normal
-0.1
CPT0023690003
Tumor
-0.1
CPT0086890003
Normal
-0.1
CPT0014470001
Normal
-0.1
CPT0025920001
Normal
-0.1
CPT0092160003
Tumor
-0.1
CPT0069000003
Tumor
-0.1
CPT0084560003
Tumor
-0.1
CPT0001230001
Normal
-0.1
CPT0086970003
Normal
-0.1
CPT0063330001
Normal
-0.1
CPT0000790001
Normal
-0.1
CPT0020130001
Normal
-0.1
CPT0076350001
Normal
-0.1
CPT0081990003
Tumor
-0.1
CPT0019160001
Normal
-0.1
CPT0088710001
Normal
-0.1
CPT0089480003
Normal
-0.2
CPT0075170001
Normal
-0.2
CPT0064400001
Normal
-0.2
CPT0078670001
Normal
-0.2
CPT0000660001
Normal
-0.2
CPT0010170001
Normal
-0.2
CPT0001510001
Normal
-0.2
CPT0006530001
Normal
-0.2
CPT0078940001
Normal
-0.2
CPT0086370003
Normal
-0.2
CPT0088920001
Normal
-0.2
CPT0017850003
Tumor
-0.2
CPT0014350001
Normal
-0.2
CPT0012090003
Normal
-0.2
CPT0066520001
Normal
-0.2
CPT0088570001
Normal
-0.2
CPT0079180003
Tumor
-0.2
CPT0001550001
Normal
-0.2
CPT0092730003
Tumor
-0.2
CPT0077500001
Normal
-0.2
CPT0081620001
Normal
-0.3
CPT0065450001
Normal
-0.3
CPT0011410003
Tumor
-0.3
CPT0092310003
Normal
-0.3
CPT0078840001
Normal
-0.3
CPT0088640003
Normal
-0.3
CPT0078510003
Tumor
-0.3
CPT0009020003
Normal
-0.3
CPT0088500001
Normal
-0.3
CPT0077140001
Normal
-0.3
CPT0088780001
Normal
-0.3
CPT0026420001
Normal
-0.3
CPT0012290003
Normal
-0.3
CPT0089040001
Normal
-0.3
CPT0078530001
Normal
-0.3
CPT0020020001
Normal
-0.3
CPT0023710001
Normal
-0.4
CPT0011240003
Tumor
-0.4
CPT0024680001
Normal
-0.4
CPT0069190001
Normal
-0.4
CPT0018250001
Normal
-0.4
CPT0069160003
Tumor
-0.4
CPT0006950001
Normal
-0.4
CPT0009080003
Normal
-0.4
CPT0012570003
Normal
-0.4
CPT0069010001
Normal
-0.5
CPT0066430001
Normal
-0.5
CPT0013790003
Normal
-0.5
CPT0015910003
Tumor
-0.5
CPT0025610001
Normal
-0.5
CPT0012770003
Normal
-0.6
CPT0012920003
Normal
-0.6
CPT0017450001
Normal
-0.8
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
