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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LAMA4 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
18.8
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
85.3
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
59.5
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
50.3
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
50.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
48.5
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
44.3
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
43.2
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
42.2
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
39.6
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
36.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
33.5
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
33.0
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
32.9
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
30.1
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
28.9
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
27.3
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
27.2
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
25.7
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
24.8
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
23.7
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
22.9
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
22.0
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
21.0
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
19.1
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
18.8
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
18.0
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
17.3
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
16.8
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
16.5
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
16.3
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
16.0
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
14.8
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
14.1
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
13.4
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
12.4
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
11.9
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
11.6
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
11.4
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
10.7
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
10.2
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
9.4
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
8.4
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
7.5
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
7.5
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
7.5
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
6.9
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
6.7
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
6.6
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
6.6
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
6.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
5.4
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
5.2
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
4.9
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
4.4
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
2.7
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
2.1
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
2.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
1.9
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
1.9
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
1.9
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
0.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
0.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
0.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LAMA4 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
42.6
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
262.9
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
213.3
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
162.9
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
157.8
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
152.9
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
151.5
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
144.2
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
136.1
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
135.8
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
131.7
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
123.7
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
119.6
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
116.5
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
116.1
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
114.6
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
108.6
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
108.1
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
106.2
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
103.8
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
103.0
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
102.1
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
100.5
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
99.5
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
95.5
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
94.7
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
93.3
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
93.2
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
93.0
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
92.0
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
91.2
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
90.5
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
90.4
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
88.6
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
88.4
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
85.5
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
84.5
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
83.3
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
83.0
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
82.7
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
82.1
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
81.6
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
81.1
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
80.8
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
80.5
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
80.1
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
80.1
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
79.7
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
79.4
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
79.4
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
79.2
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
79.1
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
78.8
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
78.6
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
78.5
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
78.4
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
77.9
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
77.9
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
77.4
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
75.9
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
75.7
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
75.4
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
75.4
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
75.2
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
73.9
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
73.3
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
73.2
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
73.0
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
70.7
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
70.6
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
70.0
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
69.6
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
69.2
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
69.1
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
68.9
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
68.9
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
68.6
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
67.4
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
67.1
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
66.7
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
66.3
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
66.0
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
65.8
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
65.7
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
65.1
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
65.1
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
64.8
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
64.8
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
64.7
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
64.0
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
63.8
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
63.7
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
63.0
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
62.7
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
62.4
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
62.0
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
61.8
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
61.2
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
61.2
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
60.9
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
60.9
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
60.8
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
60.6
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
60.5
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
60.2
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
60.1
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
60.1
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
59.8
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
59.5
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
59.2
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
59.1
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
59.0
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
59.0
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
58.9
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
58.7
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
58.5
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
58.1
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
57.7
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
57.7
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
57.7
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
57.5
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
56.6
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
56.2
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
56.2
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
56.1
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
56.0
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
55.9
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
55.8
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
55.7
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
55.5
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
55.3
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
55.0
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
54.8
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
54.6
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
54.6
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
54.6
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
54.5
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
54.5
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
54.5
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
54.4
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
54.1
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
53.9
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
53.9
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
53.9
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
53.5
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
53.4
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
53.3
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
52.5
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
52.4
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
52.4
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
52.4
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
52.1
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
52.0
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
51.9
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
51.7
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
51.5
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
51.5
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
51.5
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
51.4
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
51.4
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
51.2
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
51.1
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
51.1
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
50.9
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
50.8
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
50.8
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
50.8
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
50.8
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
50.8
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
50.8
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
50.7
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
50.5
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
50.3
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
50.1
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
50.0
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
49.8
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
49.7
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
49.4
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
49.1
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
49.1
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
49.0
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
48.9
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
48.8
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
48.5
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
48.5
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
48.4
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
47.9
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
47.5
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
47.1
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
46.9
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
46.6
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
46.5
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
46.4
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
46.4
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
46.2
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
46.0
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
45.9
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
45.7
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
45.7
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
45.6
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
45.5
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
45.4
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
45.3
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
45.0
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
44.6
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
44.5
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
44.3
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
44.2
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
44.0
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
43.9
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
43.8
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
43.8
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
43.7
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
43.7
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
43.6
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
43.6
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
43.6
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
43.5
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
43.4
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
43.4
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
43.2
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
42.9
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
42.9
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
42.6
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
42.5
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
42.3
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
42.2
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
42.0
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
41.9
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
41.7
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
41.2
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
41.1
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
40.8
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
40.8
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
40.7
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
40.2
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
40.1
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
39.9
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
39.8
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
39.6
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
39.0
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
38.9
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
38.9
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
38.7
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
38.7
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
38.4
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
38.3
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
38.3
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
38.2
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
38.0
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
37.8
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
37.8
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
37.6
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
37.4
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
37.4
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
37.3
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
37.1
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
37.1
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
37.0
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
36.9
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
36.9
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
36.8
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
36.7
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
36.4
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
36.4
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
36.4
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
36.3
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
36.3
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
36.1
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
36.0
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
36.0
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
35.9
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
35.8
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
35.8
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
35.7
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
35.6
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
35.6
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
35.5
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
35.5
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
35.3
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
35.2
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
35.0
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
35.0
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
34.8
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
34.2
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
34.1
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
34.1
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
34.1
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
34.1
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
34.0
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
33.5
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
33.5
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
33.2
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
33.2
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
32.8
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
32.8
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
32.8
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
32.7
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
32.5
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
32.4
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
32.3
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
32.2
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
32.1
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
32.1
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
31.8
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
31.5
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
31.5
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
31.4
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
31.2
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
31.2
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
30.9
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
30.7
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
30.4
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
30.2
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
30.2
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
30.2
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
30.2
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
30.1
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
30.0
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
30.0
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
30.0
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
29.7
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
29.7
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
29.6
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
29.4
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
29.4
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
29.4
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
29.2
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
29.2
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
28.6
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
28.5
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
28.4
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
28.0
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
27.9
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
27.8
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
27.8
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
27.7
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
27.7
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
27.7
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
27.6
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
27.6
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
27.5
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
27.4
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
27.3
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
27.2
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
27.1
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
26.9
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
26.3
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
26.2
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
26.1
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
25.7
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
25.6
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
25.6
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
25.4
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
25.3
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
25.2
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
25.2
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
25.0
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
24.9
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
24.7
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
24.7
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
24.6
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
24.6
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
24.5
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
24.5
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
24.4
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
24.4
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
24.3
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
24.3
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
24.2
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
24.1
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
24.1
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
24.1
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
24.1
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
24.0
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
24.0
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
23.9
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
23.7
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
23.6
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
23.6
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
23.6
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
23.5
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
23.5
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
22.8
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
22.8
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
22.7
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
22.6
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
22.6
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
22.5
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
22.5
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
22.4
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
22.3
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
22.2
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
22.1
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
22.1
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
22.1
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
22.0
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
21.9
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
21.8
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
21.8
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
21.6
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
21.5
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
21.5
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
21.5
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
21.4
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
21.4
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
21.3
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
21.2
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
21.2
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
20.9
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
20.8
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
20.8
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
20.6
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
20.4
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
19.8
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
19.7
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
19.7
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
19.5
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
19.3
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
19.3
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
19.2
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
19.1
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
19.1
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
19.0
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
18.4
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
18.3
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
18.1
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
18.1
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
18.0
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
17.7
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
17.5
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
17.5
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
17.2
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
17.1
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
17.0
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
16.8
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
16.8
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
16.8
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
16.6
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
16.6
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
16.3
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
16.2
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
16.0
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
15.9
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
15.7
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
15.5
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
15.3
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
15.1
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
14.9
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
14.8
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
14.6
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
14.6
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
14.4
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
14.0
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
13.9
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
13.8
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
13.7
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
13.7
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
13.5
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
13.5
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
13.2
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
13.1
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
13.1
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
13.0
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
13.0
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
13.0
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
13.0
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
12.9
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
12.8
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
12.8
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
12.7
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
12.6
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
12.3
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
12.1
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
11.9
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
11.6
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
11.6
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
11.5
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
11.1
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
10.9
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
10.7
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
10.6
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
10.5
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
10.4
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
10.2
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
10.0
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
10.0
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
9.8
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
9.7
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
9.7
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
9.6
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
9.6
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
9.6
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
9.5
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
9.4
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
9.3
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
9.1
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
8.9
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
8.7
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
8.7
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
8.1
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
7.8
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
7.5
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
7.3
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
7.1
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
6.9
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
6.4
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
6.0
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
5.9
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
5.4
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
5.3
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
5.3
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
4.8
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
4.6
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
4.4
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
3.8
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
3.0
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
3.0
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
2.9
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
2.1
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
1.6
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LAMA4 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
56.2
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
355.0
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
163.3
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
131.4
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
128.6
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
122.5
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
112.3
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
110.4
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
110.0
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
103.6
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
98.2
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
97.9
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
97.3
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
96.9
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
95.3
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
95.2
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
87.4
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
86.4
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
86.3
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
84.1
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
83.3
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
82.4
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
79.8
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
78.0
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
76.8
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
74.1
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
72.3
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
71.7
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
70.6
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
69.7
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
68.8
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
67.9
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
67.0
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
66.9
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
65.8
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
64.8
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
64.2
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
62.9
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
61.8
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
61.3
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
54.3
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
54.2
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
53.8
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
53.4
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
53.1
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
50.1
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
49.3
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
48.5
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
47.2
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
45.9
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
45.7
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
45.4
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
44.1
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
43.0
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
42.9
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
42.8
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
42.5
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
42.5
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
41.5
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
41.5
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
40.3
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
39.3
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
39.2
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
39.1
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
39.1
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
38.0
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
38.0
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
37.7
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
36.2
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
35.4
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
35.4
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
34.6
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
34.0
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
33.8
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
32.9
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
30.7
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
29.8
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
29.3
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
27.2
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
26.9
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
26.8
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
25.4
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
24.7
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
24.1
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
20.9
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
20.6
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
20.0
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
19.5
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
19.4
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
18.2
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
17.8
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
15.8
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
15.3
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
9.5
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
7.0
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
6.4
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
6.3
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
4.6
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
3.8
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LAMA4 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
13.4
Number of samples
282
Samples
Sample
Description
TPM
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
108.8
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
90.0
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
80.1
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
78.3
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
71.5
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
70.2
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
64.3
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
62.3
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
60.0
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
58.3
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
53.4
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
53.2
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
51.8
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
46.9
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
45.9
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
43.5
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
42.9
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
42.3
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
42.1
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
40.3
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
39.3
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
38.9
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
38.7
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
38.5
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
37.8
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
37.6
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
37.0
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
36.5
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
36.1
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
34.0
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
33.2
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
33.2
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
31.8
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
31.3
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
30.6
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
29.9
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
28.8
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
28.1
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
27.5
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
26.1
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
26.0
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
25.6
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
25.3
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
25.0
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
24.6
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
24.5
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
23.3
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
23.2
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
23.2
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
22.6
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
22.5
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
22.3
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
22.1
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
22.1
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
21.8
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
21.0
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
20.3
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
20.0
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
20.0
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
19.8
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
19.6
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
19.4
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
19.2
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
19.2
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
19.1
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
18.6
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
17.7
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
17.7
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
16.9
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
16.8
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
16.7
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
16.4
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
16.2
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
15.7
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
15.6
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
15.5
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
15.5
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
15.2
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
14.9
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
14.4
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
14.3
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
14.2
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
14.2
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
14.1
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
14.0
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
13.8
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
12.8
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
12.7
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
12.6
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
12.4
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
12.3
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
12.3
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
12.2
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
12.0
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
11.8
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
11.7
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
11.7
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
11.5
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
11.5
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
11.4
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
11.4
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
11.3
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
11.2
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
11.2
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
11.1
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
11.0
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
10.9
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
10.9
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
10.8
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
10.8
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
10.5
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
10.3
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
10.3
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
10.2
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
10.1
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
9.9
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
9.8
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
9.6
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
9.5
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
9.5
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
9.3
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
9.1
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
9.1
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
9.0
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
8.9
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
8.9
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
8.9
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
8.6
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
8.6
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
8.6
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
8.5
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
8.5
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
8.4
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
8.4
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
8.3
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
8.3
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
8.3
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
8.2
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
8.2
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
8.1
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
8.1
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
8.0
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
8.0
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
8.0
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
7.7
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
7.7
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
7.6
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
7.5
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
7.5
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
7.5
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
7.3
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
7.3
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
7.2
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
7.1
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
6.9
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
6.9
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
6.8
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
6.8
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
6.6
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
6.5
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
6.5
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
6.5
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
6.5
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
6.4
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
6.3
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
6.0
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
5.9
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
5.8
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
5.8
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
5.8
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
5.7
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
5.7
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
5.6
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
5.5
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
5.4
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
5.3
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
5.2
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
5.2
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
5.1
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
5.0
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
4.9
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
4.9
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
4.9
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
4.9
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
4.8
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
4.7
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
4.7
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
4.3
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
4.3
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
4.2
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
4.1
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
4.1
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
4.1
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
4.0
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
4.0
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
4.0
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
4.0
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
4.0
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
3.9
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
3.9
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
3.7
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
3.7
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
3.6
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
3.6
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
3.4
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
3.3
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
3.3
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
3.3
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
3.2
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
3.2
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
3.2
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
3.1
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
3.1
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
3.0
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
3.0
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
3.0
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
2.9
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
2.9
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
2.8
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
2.8
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
2.7
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
2.7
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
2.7
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
2.7
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
2.7
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
2.6
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
2.5
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
2.4
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
2.4
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
2.3
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
2.3
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
2.2
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
2.2
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
2.2
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
2.2
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
2.2
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
2.1
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
2.0
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
1.9
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
1.9
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
1.8
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
1.8
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
1.6
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
1.6
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
1.5
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
1.5
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
1.5
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
1.4
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
1.3
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
1.2
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
1.2
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
1.2
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
1.2
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
1.2
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
1.2
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
1.1
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
1.0
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
0.9
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
0.9
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
0.9
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
0.9
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
0.9
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
0.7
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
0.7
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
0.6
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
0.6
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
0.5
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
0.0
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
0.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
0.0
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
0.0
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
0.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
0.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
0.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
0.0
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
0.0
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
0.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
0.0
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
0.0
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
0.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0077490003
Tumor
1.8
CPT0088630003
Tumor
1.7
CPT0011240003
Tumor
1.6
CPT0085670003
Tumor
1.6
CPT0088760003
Tumor
1.4
CPT0000640003
Tumor
1.2
CPT0092290003
Tumor
1.2
CPT0009000003
Tumor
1.2
CPT0084560003
Tumor
1.1
CPT0014370004
Tumor
1.1
CPT0081600003
Tumor
1.1
CPT0088900003
Tumor
1.1
CPT0071150004
Tumor
1.0
CPT0010160003
Tumor
1.0
CPT0092730003
Tumor
1.0
CPT0012080003
Tumor
1.0
CPT0069000003
Tumor
1.0
CPT0015910003
Tumor
1.0
CPT0000870016
Tumor
0.9
CPT0066470004
Tumor
0.9
CPT0025350003
Tumor
0.9
CPT0088690003
Tumor
0.9
CPT0006630003
Tumor
0.9
CPT0007860003
Tumor
0.9
CPT0079270003
Tumor
0.9
CPT0066480003
Tumor
0.8
CPT0089460004
Tumor
0.8
CPT0089020003
Tumor
0.8
CPT0092190003
Normal
0.8
CPT0065870003
Tumor
0.8
CPT0021240003
Tumor
0.8
CPT0077110003
Tumor
0.8
CPT0075720003
Tumor
0.7
CPT0000780007
Tumor
0.7
CPT0086950003
Tumor
0.7
CPT0077310003
Tumor
0.7
CPT0078930003
Tumor
0.7
CPT0006900003
Tumor
0.7
CPT0086870003
Tumor
0.7
CPT0025110003
Tumor
0.7
CPT0025170003
Tumor
0.7
CPT0017850003
Tumor
0.7
CPT0086030003
Tumor
0.7
CPT0019990003
Tumor
0.6
CPT0081990003
Tumor
0.6
CPT0075560003
Tumor
0.6
CPT0025230003
Tumor
0.6
CPT0012670003
Tumor
0.6
CPT0092790003
Tumor
0.6
CPT0065690003
Tumor
0.6
CPT0069160003
Tumor
0.6
CPT0078510003
Tumor
0.6
CPT0009060003
Tumor
0.5
CPT0012370003
Tumor
0.5
CPT0006440003
Tumor
0.5
CPT0012900004
Tumor
0.5
CPT0079480003
Tumor
0.5
CPT0075130003
Tumor
0.5
CPT0078990003
Tumor
0.5
CPT0012550003
Tumor
0.5
CPT0025880003
Tumor
0.4
CPT0012280003
Tumor
0.4
CPT0079230003
Tumor
0.4
CPT0001180009
Tumor
0.4
CPT0063320003
Tumor
0.4
CPT0087040003
Tumor
0.4
CPT0017410003
Tumor
0.4
CPT0025580004
Tumor
0.4
CPT0001220008
Tumor
0.4
CPT0001540009
Tumor
0.4
CPT0026410003
Tumor
0.3
CPT0010120001
Normal
0.3
CPT0015810003
Tumor
0.3
CPT0001340003
Tumor
0.3
CPT0025290003
Tumor
0.3
CPT0078830003
Tumor
0.3
CPT0079380003
Tumor
0.3
CPT0065810003
Tumor
0.3
CPT0088480003
Tumor
0.3
CPT0079410003
Tumor
0.3
CPT0023690003
Tumor
0.2
CPT0086820003
Tumor
0.2
CPT0065930003
Tumor
0.2
CPT0014160003
Tumor
0.1
CPT0092160003
Tumor
0.1
CPT0079510001
Normal
0.1
CPT0077320001
Normal
0.1
CPT0020120003
Tumor
0.1
CPT0002350011
Tumor
0.1
CPT0065430003
Tumor
0.1
CPT0007320003
Tumor
0.1
CPT0001500009
Tumor
0.1
CPT0019130003
Tumor
0.1
CPT0065750003
Tumor
0.0
CPT0084590001
Normal
0.0
CPT0086360003
Tumor
0.0
CPT0001270001
Normal
0.0
CPT0081880003
Tumor
0.0
CPT0086830003
Normal
-0.1
CPT0001260009
Tumor
-0.1
CPT0079300001
Normal
-0.1
CPT0010110003
Tumor
-0.1
CPT0078530001
Normal
-0.1
CPT0023350003
Tumor
-0.1
CPT0086970003
Normal
-0.1
CPT0063630003
Tumor
-0.1
CPT0012640003
Normal
-0.1
CPT0064370003
Tumor
-0.2
CPT0012920003
Normal
-0.2
CPT0078660003
Tumor
-0.2
CPT0002370001
Normal
-0.2
CPT0075170001
Normal
-0.2
CPT0065820001
Normal
-0.3
CPT0079180003
Tumor
-0.4
CPT0011410003
Tumor
-0.4
CPT0019160001
Normal
-0.4
CPT0088500001
Normal
-0.4
CPT0012290003
Normal
-0.4
CPT0014470001
Normal
-0.4
CPT0069190001
Normal
-0.4
CPT0076330003
Tumor
-0.4
CPT0013790003
Normal
-0.5
CPT0009020003
Normal
-0.5
CPT0088570001
Normal
-0.5
CPT0025060001
Normal
-0.5
CPT0000660001
Normal
-0.5
CPT0069010001
Normal
-0.5
CPT0001510001
Normal
-0.5
CPT0001550001
Normal
-0.5
CPT0063330001
Normal
-0.6
CPT0020130001
Normal
-0.6
CPT0018250001
Normal
-0.6
CPT0015730003
Tumor
-0.6
CPT0000890001
Normal
-0.6
CPT0025050003
Tumor
-0.6
CPT0088640003
Normal
-0.6
CPT0012570003
Normal
-0.7
CPT0089040001
Normal
-0.7
CPT0024680001
Normal
-0.7
CPT0025920001
Normal
-0.7
CPT0007470001
Normal
-0.7
CPT0014130001
Normal
-0.7
CPT0017450001
Normal
-0.7
CPT0063640001
Normal
-0.7
CPT0078940001
Normal
-0.7
CPT0006950001
Normal
-0.8
CPT0010170001
Normal
-0.8
CPT0024670003
Tumor
-0.8
CPT0088550004
Tumor
-0.8
CPT0020020001
Normal
-0.8
CPT0088710001
Normal
-0.8
CPT0076350001
Normal
-0.8
CPT0007870001
Normal
-0.8
CPT0082010001
Normal
-0.8
CPT0012090003
Normal
-0.8
CPT0079000001
Normal
-0.8
CPT0006530001
Normal
-0.8
CPT0077500001
Normal
-0.9
CPT0064400001
Normal
-0.9
CPT0077140001
Normal
-0.9
CPT0081620001
Normal
-0.9
CPT0014450004
Tumor
-0.9
CPT0009080003
Normal
-0.9
CPT0025610001
Normal
-0.9
CPT0078670001
Normal
-0.9
CPT0086890003
Normal
-0.9
CPT0066520001
Normal
-0.9
CPT0014350001
Normal
-1.0
CPT0006730001
Normal
-1.0
CPT0092740003
Normal
-1.0
CPT0066430001
Normal
-1.0
CPT0088780001
Normal
-1.0
CPT0075570001
Normal
-1.0
CPT0023360001
Normal
-1.0
CPT0001230001
Normal
-1.0
CPT0092310003
Normal
-1.0
CPT0012770003
Normal
-1.0
CPT0086370003
Normal
-1.1
CPT0079430001
Normal
-1.1
CPT0001190001
Normal
-1.1
CPT0001350001
Normal
-1.1
CPT0089480003
Normal
-1.1
CPT0026420001
Normal
-1.1
CPT0078840001
Normal
-1.2
CPT0023710001
Normal
-1.2
CPT0000790001
Normal
-1.2
CPT0087050003
Normal
-1.2
CPT0092800003
Normal
-1.3
CPT0065450001
Normal
-1.3
CPT0088920001
Normal
-1.3
CPT0002270011
Tumor
-1.3
CPT0088970003
Tumor
-1.5
CPT0012180003
Tumor
-1.7
CPT0078800003
Tumor
-1.8
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.