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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GMDS is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
9.1
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
44.2
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
19.3
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
19.1
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
18.6
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
18.4
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
17.7
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
15.6
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
15.4
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
15.3
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
14.9
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
14.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
13.4
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
13.0
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
12.8
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
12.7
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
11.6
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
11.3
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
11.1
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
11.0
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
10.2
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
10.1
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
10.0
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
10.0
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
9.8
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
9.2
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
9.2
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
9.1
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
9.0
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
9.0
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
7.9
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
7.9
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
7.8
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
7.8
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
7.7
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
7.5
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
7.4
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
7.2
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
7.2
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
6.7
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
6.7
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
6.6
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
6.4
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
6.4
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
6.2
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
6.2
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
6.2
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
6.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
6.0
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
5.9
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
5.9
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
5.9
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
5.8
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
5.3
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
5.3
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
5.2
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
4.6
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
4.1
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
0.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
0.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
0.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
0.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
0.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
0.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GMDS is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
9.7
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
49.5
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
44.3
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
31.9
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
26.1
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
24.9
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
23.4
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
23.3
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
23.2
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
23.1
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
22.7
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
22.7
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
22.2
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
22.0
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
21.4
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
21.0
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
20.9
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
20.8
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
20.6
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
20.2
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
20.0
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
20.0
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
19.8
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
19.7
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
19.5
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
19.2
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
18.6
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
18.3
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
18.1
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
17.8
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
17.7
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
17.4
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
17.3
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
17.2
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
16.8
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
16.8
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
16.7
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
16.6
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
16.6
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
16.2
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
16.2
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
16.1
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
16.1
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
16.0
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
15.7
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
15.6
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
15.5
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
15.4
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
15.4
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
15.3
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
15.2
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
15.1
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
15.0
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
14.9
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
14.9
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
14.8
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
14.7
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
14.7
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
14.7
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
14.5
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
14.4
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
14.4
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
14.3
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
14.2
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
14.2
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
14.2
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
14.2
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
14.1
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
14.1
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
14.0
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
14.0
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
13.8
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
13.7
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
13.6
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
13.6
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
13.5
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
13.5
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
13.3
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
13.3
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
13.2
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
13.1
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
13.1
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
13.0
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
12.9
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
12.9
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
12.9
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
12.8
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
12.8
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
12.7
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
12.6
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
12.6
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
12.5
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
12.5
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
12.5
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
12.4
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
12.4
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
12.4
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
12.4
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
12.3
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
12.3
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
12.2
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
12.2
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
12.2
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
12.2
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
12.2
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
12.2
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
12.2
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
12.1
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
12.1
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
12.1
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
12.1
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
12.1
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
12.0
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
12.0
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
12.0
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
11.9
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
11.9
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
11.9
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
11.8
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
11.8
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
11.8
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
11.8
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
11.8
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
11.8
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
11.8
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
11.7
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
11.7
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
11.6
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
11.6
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
11.6
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
11.6
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
11.6
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
11.5
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
11.4
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
11.4
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
11.2
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
11.1
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
11.1
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
11.1
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
11.1
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
11.0
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
10.9
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
10.9
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
10.9
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
10.8
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
10.8
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
10.8
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
10.8
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
10.7
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
10.7
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
10.7
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
10.7
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
10.7
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
10.7
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
10.6
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
10.6
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
10.6
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
10.6
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
10.6
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
10.6
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
10.5
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
10.5
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
10.5
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
10.5
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
10.5
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
10.5
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
10.4
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
10.4
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
10.4
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
10.4
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
10.4
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
10.4
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
10.4
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
10.3
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
10.3
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
10.3
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
10.2
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
10.2
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
10.2
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
10.2
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
10.2
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
10.1
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
10.1
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
10.1
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
10.1
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
10.0
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
10.0
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
10.0
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
10.0
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
9.9
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
9.9
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
9.9
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
9.8
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
9.8
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
9.8
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
9.8
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
9.8
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
9.7
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
9.7
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
9.7
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
9.7
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
9.7
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
9.7
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
9.6
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
9.6
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
9.6
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
9.6
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
9.6
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
9.6
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
9.6
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
9.6
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
9.5
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
9.5
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
9.5
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
9.5
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
9.4
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
9.4
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
9.4
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
9.4
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
9.4
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
9.3
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
9.3
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
9.3
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
9.3
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
9.3
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
9.3
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
9.3
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
9.2
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
9.2
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
9.2
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
9.2
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
9.2
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
9.2
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
9.2
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
9.2
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
9.1
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
9.1
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
9.1
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
9.1
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
9.1
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
9.1
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
9.1
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
9.0
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
8.9
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
8.9
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
8.9
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
8.9
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
8.9
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
8.9
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
8.8
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
8.8
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
8.8
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
8.8
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
8.8
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
8.8
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
8.8
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
8.8
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
8.8
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
8.8
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
8.7
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
8.7
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
8.7
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
8.7
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
8.7
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
8.7
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
8.7
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
8.7
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
8.7
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
8.7
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
8.7
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
8.6
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
8.6
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
8.6
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
8.6
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
8.6
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
8.6
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
8.6
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
8.6
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
8.6
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
8.6
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
8.6
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
8.6
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
8.5
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
8.5
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
8.5
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
8.5
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
8.5
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
8.5
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
8.4
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
8.4
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
8.4
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
8.4
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
8.4
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
8.4
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
8.4
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
8.3
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
8.3
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
8.3
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
8.3
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
8.3
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
8.3
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
8.3
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
8.3
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
8.3
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
8.3
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
8.3
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
8.2
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
8.2
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
8.2
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
8.2
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
8.2
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
8.1
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
8.1
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
8.0
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
8.0
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
8.0
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
8.0
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
8.0
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
8.0
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
8.0
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
7.9
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
7.9
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
7.9
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
7.9
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
7.9
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
7.8
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
7.8
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
7.8
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
7.8
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
7.8
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
7.7
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
7.7
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
7.7
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
7.7
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
7.7
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
7.7
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
7.7
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
7.6
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
7.6
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
7.6
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
7.6
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
7.6
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
7.6
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
7.5
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
7.5
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
7.5
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
7.5
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
7.5
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
7.5
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
7.4
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
7.4
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
7.4
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
7.4
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
7.4
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
7.4
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
7.4
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
7.3
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
7.3
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
7.3
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
7.3
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
7.3
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
7.2
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
7.2
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
7.2
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
7.2
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
7.2
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
7.2
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
7.2
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
7.1
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
7.1
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
7.1
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
7.1
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
7.1
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
7.1
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
7.0
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
7.0
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
7.0
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
7.0
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
7.0
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
7.0
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
6.9
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
6.9
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
6.9
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
6.9
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
6.9
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
6.9
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
6.9
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
6.9
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
6.8
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
6.8
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
6.8
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
6.8
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
6.8
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
6.8
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
6.8
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
6.8
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
6.8
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
6.8
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
6.8
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
6.8
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
6.7
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
6.7
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
6.7
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
6.7
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
6.7
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
6.7
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
6.6
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
6.6
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
6.6
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
6.6
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
6.6
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
6.6
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
6.6
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
6.6
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
6.5
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
6.5
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
6.5
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
6.5
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
6.5
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
6.4
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
6.4
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
6.3
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
6.3
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
6.3
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
6.3
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
6.3
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
6.2
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
6.2
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
6.2
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
6.1
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
6.1
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
6.1
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
6.1
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
6.1
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
6.1
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
6.1
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
6.1
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
6.0
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
6.0
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
6.0
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
6.0
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
6.0
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
5.9
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
5.9
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
5.9
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
5.9
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
5.9
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
5.9
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
5.8
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
5.8
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
5.8
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
5.8
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
5.7
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
5.7
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
5.7
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
5.7
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
5.7
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
5.7
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
5.7
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
5.6
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
5.6
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
5.6
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
5.6
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
5.6
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
5.6
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
5.5
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
5.5
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
5.5
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
5.5
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
5.5
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
5.5
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
5.4
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
5.4
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
5.4
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
5.3
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
5.3
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
5.3
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
5.3
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
5.2
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
5.2
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
5.2
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
5.1
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
5.0
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
5.0
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
5.0
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
5.0
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
5.0
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
4.9
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
4.9
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
4.9
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
4.8
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
4.8
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
4.8
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
4.7
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
4.7
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
4.7
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
4.6
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
4.6
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
4.6
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
4.5
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
4.5
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
4.5
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
4.5
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
4.3
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
4.0
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
3.9
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
3.9
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
3.6
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
3.4
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
3.3
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
3.3
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
3.3
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
3.3
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
3.2
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
3.2
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
3.1
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
3.0
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
2.8
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
2.8
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
2.3
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
2.1
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GMDS is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
11.1
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
33.9
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
24.0
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
22.2
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
20.6
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
18.8
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
18.7
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
17.5
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
17.4
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
17.4
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
17.0
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
16.4
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
15.7
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
15.5
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
15.0
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
14.9
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
14.7
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
14.3
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
14.1
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
13.9
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
13.5
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
13.3
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
13.3
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
13.3
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
13.2
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
13.0
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
12.8
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
12.8
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
12.7
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
12.6
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
12.6
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
12.5
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
12.4
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
12.4
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
11.9
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
11.9
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
11.8
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
11.7
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
11.7
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
11.7
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
11.6
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
11.6
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
11.4
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
11.3
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
11.2
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
11.2
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
11.1
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
11.0
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
10.9
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
10.7
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
10.7
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
10.7
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
10.4
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
10.3
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
10.3
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
10.0
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
9.9
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
9.5
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
9.4
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
9.4
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
9.3
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
9.3
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
9.3
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
9.2
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
9.1
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
9.0
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
9.0
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
9.0
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
8.8
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
8.8
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
8.8
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
8.7
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
8.5
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
8.4
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
8.2
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
8.2
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
8.2
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
8.2
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
8.1
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
8.0
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
8.0
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
7.9
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
7.7
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
7.7
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
7.6
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
7.5
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
7.2
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
7.1
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
6.9
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
6.9
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
6.7
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
6.5
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
6.1
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
6.0
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
5.4
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
5.2
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
5.2
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
5.1
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
4.9
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
4.5
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GMDS is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
19.3
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
52.8
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
48.3
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
47.8
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
43.8
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
43.6
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
42.8
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
42.7
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
41.2
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
40.5
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
39.2
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
38.6
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
36.5
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
36.5
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
35.8
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
34.9
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
34.4
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
34.3
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
34.3
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
33.7
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
33.5
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
33.3
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
33.1
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
32.9
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
32.3
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
32.3
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
32.2
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
31.9
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
31.8
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
31.6
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
31.2
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
31.1
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
30.9
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
30.4
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
30.2
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
29.7
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
29.7
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
29.1
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
28.6
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
28.5
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
28.4
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
28.3
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
28.3
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
28.1
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
28.1
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
28.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
27.8
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
27.8
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
27.7
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
27.7
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
27.6
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
27.5
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
27.2
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
27.0
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
26.8
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
26.7
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
26.6
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
26.6
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
26.6
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
26.3
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
26.3
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
26.3
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
26.2
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
25.9
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
25.8
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
25.7
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
25.7
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
25.7
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
25.2
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
25.1
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
25.0
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
25.0
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
24.5
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
24.4
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
24.2
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
24.1
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
24.1
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
24.0
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
23.7
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
23.5
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
23.5
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
23.5
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
23.4
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
23.4
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
23.4
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
23.4
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
23.3
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
23.0
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
23.0
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
22.9
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
22.9
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
22.9
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
22.9
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
22.8
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
22.8
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
22.8
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
22.7
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
22.7
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
22.7
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
22.6
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
22.4
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
22.4
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
22.1
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
21.8
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
21.8
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
21.7
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
21.6
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
21.3
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
21.3
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
21.2
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
21.2
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
20.9
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
20.7
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
20.6
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
20.6
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
20.5
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
20.5
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
20.5
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
20.4
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
20.3
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
20.3
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
20.3
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
20.2
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
20.2
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
20.2
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
20.1
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
20.1
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
20.0
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
19.9
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
19.8
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
19.7
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
19.7
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
19.6
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
19.6
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
19.6
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
19.4
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
19.3
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
19.2
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
19.1
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
18.9
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
18.8
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
18.7
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
18.7
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
18.7
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
18.5
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
18.5
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
18.4
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
18.3
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
18.2
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
18.2
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
18.1
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
18.0
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
18.0
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
18.0
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
17.9
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
17.8
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
17.8
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
17.7
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
17.7
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
17.5
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
17.4
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
17.4
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
17.3
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
17.3
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
17.1
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
17.0
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
17.0
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
17.0
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
17.0
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
17.0
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
16.9
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
16.8
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
16.6
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
16.6
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
16.6
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
16.4
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
16.4
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
16.3
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
16.3
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
16.2
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
16.1
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
16.0
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
16.0
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
15.7
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
15.7
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
15.7
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
15.6
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
15.5
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
15.5
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
15.4
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
15.2
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
15.1
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
15.0
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
14.9
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
14.9
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
14.8
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
14.7
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
14.6
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
14.5
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
14.5
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
14.3
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
14.3
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
14.3
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
14.2
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
14.1
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
14.0
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
13.9
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
13.8
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
13.8
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
13.8
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
13.6
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
13.5
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
13.5
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
13.4
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
13.4
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
13.3
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
13.3
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
13.3
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
13.1
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
13.0
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
12.9
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
12.6
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
12.5
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
12.4
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
12.2
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
11.9
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
11.8
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
11.8
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
11.7
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
11.5
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
11.4
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
11.4
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
11.3
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
11.2
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
11.2
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
10.9
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
10.8
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
10.7
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
10.7
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
10.6
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
10.6
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
9.9
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
9.6
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
9.5
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
9.3
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
8.9
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
8.8
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
8.7
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
8.7
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
8.5
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
8.3
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
7.9
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
7.4
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
7.3
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
7.2
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
7.0
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
7.0
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
7.0
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
6.8
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
6.5
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
6.2
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
6.1
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
5.8
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
5.7
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
5.0
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
5.0
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
4.8
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
4.3
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
3.6
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
3.5
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
3.1
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
0.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
0.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
0.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
0.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
0.0
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
0.0
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
0.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
0.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
0.0
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
0.0
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0079380003
Tumor
1.1
CPT0012370003
Tumor
1.0
CPT0088970003
Tumor
0.9
CPT0025050003
Tumor
0.9
CPT0078660003
Tumor
0.7
CPT0078800003
Tumor
0.6
CPT0012640003
Normal
0.6
CPT0079510001
Normal
0.6
CPT0084590001
Normal
0.6
CPT0012280003
Tumor
0.5
CPT0088550004
Tumor
0.5
CPT0019130003
Tumor
0.5
CPT0025880003
Tumor
0.5
CPT0079180003
Tumor
0.5
CPT0015810003
Tumor
0.5
CPT0086360003
Tumor
0.5
CPT0077320001
Normal
0.5
CPT0069160003
Tumor
0.5
CPT0078930003
Tumor
0.5
CPT0092160003
Tumor
0.4
CPT0092190003
Normal
0.4
CPT0077110003
Tumor
0.4
CPT0079300001
Normal
0.4
CPT0065430003
Tumor
0.4
CPT0075170001
Normal
0.3
CPT0001270001
Normal
0.3
CPT0012550003
Tumor
0.3
CPT0013790003
Normal
0.3
CPT0078830003
Tumor
0.3
CPT0069190001
Normal
0.3
CPT0002270011
Tumor
0.3
CPT0063330001
Normal
0.3
CPT0001230001
Normal
0.3
CPT0078990003
Tumor
0.2
CPT0025110003
Tumor
0.2
CPT0006530001
Normal
0.2
CPT0063640001
Normal
0.2
CPT0077490003
Tumor
0.2
CPT0065820001
Normal
0.2
CPT0017450001
Normal
0.2
CPT0018250001
Normal
0.2
CPT0007470001
Normal
0.2
CPT0001190001
Normal
0.2
CPT0065750003
Tumor
0.2
CPT0001550001
Normal
0.2
CPT0012570003
Normal
0.2
CPT0012920003
Normal
0.2
CPT0079430001
Normal
0.2
CPT0025230003
Tumor
0.1
CPT0020120003
Tumor
0.1
CPT0001540009
Tumor
0.1
CPT0006730001
Normal
0.1
CPT0019160001
Normal
0.1
CPT0064370003
Tumor
0.1
CPT0007320003
Tumor
0.1
CPT0020130001
Normal
0.1
CPT0006900003
Tumor
0.1
CPT0088570001
Normal
0.1
CPT0021240003
Tumor
0.1
CPT0065870003
Tumor
0.1
CPT0000790001
Normal
0.1
CPT0009020003
Normal
0.1
CPT0000660001
Normal
0.1
CPT0001350001
Normal
0.1
CPT0007870001
Normal
0.1
CPT0088480003
Tumor
0.1
CPT0081620001
Normal
0.1
CPT0089040001
Normal
0.1
CPT0001180009
Tumor
0.1
CPT0001510001
Normal
0.1
CPT0025920001
Normal
0.1
CPT0079000001
Normal
0.1
CPT0012290003
Normal
0.1
CPT0025170003
Tumor
0.1
CPT0066520001
Normal
0.1
CPT0012090003
Normal
0.1
CPT0088710001
Normal
0.1
CPT0006950001
Normal
0.1
CPT0076350001
Normal
0.1
CPT0010120001
Normal
0.1
CPT0077140001
Normal
0.1
CPT0000890001
Normal
0.1
CPT0075130003
Tumor
0.0
CPT0088920001
Normal
0.0
CPT0015730003
Tumor
0.0
CPT0082010001
Normal
0.0
CPT0076330003
Tumor
0.0
CPT0086830003
Normal
0.0
CPT0078940001
Normal
0.0
CPT0064400001
Normal
0.0
CPT0009060003
Tumor
0.0
CPT0009000003
Tumor
0.0
CPT0088780001
Normal
0.0
CPT0014450004
Tumor
0.0
CPT0017410003
Tumor
0.0
CPT0088640003
Normal
0.0
CPT0002350011
Tumor
0.0
CPT0020020001
Normal
0.0
CPT0063320003
Tumor
0.0
CPT0066470004
Tumor
0.0
CPT0086970003
Normal
0.0
CPT0001260009
Tumor
0.0
CPT0078670001
Normal
0.0
CPT0012180003
Tumor
0.0
CPT0085670003
Tumor
0.0
CPT0010110003
Tumor
0.0
CPT0002370001
Normal
0.0
CPT0006630003
Tumor
0.0
CPT0092800003
Normal
0.0
CPT0014470001
Normal
0.0
CPT0075560003
Tumor
0.0
CPT0014130001
Normal
0.0
CPT0024680001
Normal
0.0
CPT0086370003
Normal
0.0
CPT0088500001
Normal
0.0
CPT0023690003
Tumor
0.0
CPT0065450001
Normal
0.0
CPT0086030003
Tumor
0.0
CPT0066480003
Tumor
0.0
CPT0009080003
Normal
0.0
CPT0092730003
Tumor
0.0
CPT0014350001
Normal
0.0
CPT0023360001
Normal
0.0
CPT0065930003
Tumor
0.0
CPT0088900003
Tumor
-0.1
CPT0092790003
Tumor
-0.1
CPT0015910003
Tumor
-0.1
CPT0025060001
Normal
-0.1
CPT0092290003
Tumor
-0.1
CPT0089480003
Normal
-0.1
CPT0089460004
Tumor
-0.1
CPT0075570001
Normal
-0.1
CPT0086820003
Tumor
-0.1
CPT0088760003
Tumor
-0.1
CPT0077500001
Normal
-0.1
CPT0012770003
Normal
-0.1
CPT0025610001
Normal
-0.1
CPT0078840001
Normal
-0.1
CPT0012900004
Tumor
-0.1
CPT0001220008
Tumor
-0.1
CPT0026420001
Normal
-0.1
CPT0081600003
Tumor
-0.1
CPT0023350003
Tumor
-0.1
CPT0089020003
Tumor
-0.1
CPT0019990003
Tumor
-0.1
CPT0086890003
Normal
-0.2
CPT0017850003
Tumor
-0.2
CPT0010170001
Normal
-0.2
CPT0075720003
Tumor
-0.2
CPT0078530001
Normal
-0.2
CPT0011410003
Tumor
-0.2
CPT0092310003
Normal
-0.2
CPT0079230003
Tumor
-0.2
CPT0087040003
Tumor
-0.2
CPT0065810003
Tumor
-0.2
CPT0026410003
Tumor
-0.2
CPT0092740003
Normal
-0.2
CPT0086950003
Tumor
-0.2
CPT0087050003
Normal
-0.2
CPT0014160003
Tumor
-0.2
CPT0069000003
Tumor
-0.2
CPT0025290003
Tumor
-0.2
CPT0069010001
Normal
-0.2
CPT0000780007
Tumor
-0.2
CPT0088630003
Tumor
-0.2
CPT0066430001
Normal
-0.2
CPT0023710001
Normal
-0.2
CPT0000870016
Tumor
-0.3
CPT0006440003
Tumor
-0.3
CPT0071150004
Tumor
-0.3
CPT0001340003
Tumor
-0.3
CPT0079480003
Tumor
-0.3
CPT0088690003
Tumor
-0.3
CPT0024670003
Tumor
-0.3
CPT0078510003
Tumor
-0.3
CPT0063630003
Tumor
-0.3
CPT0086870003
Tumor
-0.3
CPT0007860003
Tumor
-0.4
CPT0012080003
Tumor
-0.4
CPT0025350003
Tumor
-0.4
CPT0025580004
Tumor
-0.4
CPT0012670003
Tumor
-0.4
CPT0079410003
Tumor
-0.4
CPT0011240003
Tumor
-0.4
CPT0077310003
Tumor
-0.4
CPT0000640003
Tumor
-0.5
CPT0079270003
Tumor
-0.5
CPT0084560003
Tumor
-0.5
CPT0014370004
Tumor
-0.5
CPT0065690003
Tumor
-0.5
CPT0010160003
Tumor
-0.5
CPT0081990003
Tumor
-0.6
CPT0001500009
Tumor
-0.6
CPT0081880003
Tumor
-0.6
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
