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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TMEM30A is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
52.5
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
131.3
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
116.7
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
111.2
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
106.4
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
103.4
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
87.6
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
86.9
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
78.2
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
77.2
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
74.5
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
72.9
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
68.4
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
67.1
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
66.6
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
65.2
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
64.3
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
63.9
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
62.5
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
61.1
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
59.9
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
58.3
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
57.7
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
57.1
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
56.0
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
55.1
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
54.1
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
53.2
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
52.8
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
52.1
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
52.0
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
51.6
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
50.9
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
47.8
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
47.7
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
47.7
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
47.0
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
45.9
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
43.8
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
43.1
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
42.7
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
41.2
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
40.8
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
39.6
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
39.0
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
37.8
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
35.4
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
35.3
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
33.4
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
33.2
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
32.3
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
31.1
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
29.3
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
28.1
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
27.9
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
27.8
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
27.2
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
27.1
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
25.1
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
24.9
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
24.3
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
23.4
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
22.6
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
20.8
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TMEM30A is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
63.9
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
287.3
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
260.7
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
255.6
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
172.6
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
171.9
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
148.8
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
141.1
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
141.1
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
136.9
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
135.8
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
132.7
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
125.3
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
124.4
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
123.6
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
122.2
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
122.1
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
120.3
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
119.7
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
118.9
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
118.9
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
117.2
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
115.2
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
113.8
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
113.4
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
112.6
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
112.3
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
111.8
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
111.7
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
109.5
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
109.4
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
109.4
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
108.8
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
108.6
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
107.5
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
107.4
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
107.3
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
107.1
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
107.1
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
106.1
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
105.9
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
105.8
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
105.5
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
105.1
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
103.9
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
103.7
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
103.2
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
102.9
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
102.8
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
101.9
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
101.8
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
101.7
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
101.6
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
101.0
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
101.0
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
100.5
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
99.4
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
98.9
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
98.7
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
98.4
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
97.8
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
97.8
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
97.2
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
96.8
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
96.7
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
95.4
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
95.3
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
94.6
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
94.5
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
94.0
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
93.9
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
93.8
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
93.8
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
92.9
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
92.5
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
92.5
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
91.8
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
91.7
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
91.7
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
91.6
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
91.3
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
91.2
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
90.6
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
90.4
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
90.4
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
90.3
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
90.3
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
89.6
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
89.5
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
89.1
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
89.1
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
89.0
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
88.7
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
88.2
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
87.8
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
87.7
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
87.5
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
87.1
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
86.9
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
86.6
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
86.6
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
86.3
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
86.1
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
85.9
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
85.8
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
85.8
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
85.5
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
85.4
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
85.3
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
85.3
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
84.6
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
84.4
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
84.3
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
84.2
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
84.0
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
83.9
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
83.7
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
83.5
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
82.6
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
82.6
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
82.5
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
82.0
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
81.9
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
81.8
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
81.8
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
81.6
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
81.1
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
81.1
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
81.0
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
81.0
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
80.4
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
80.2
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
80.2
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
80.0
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
79.8
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
79.8
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
79.6
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
79.4
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
79.4
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
79.2
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
79.1
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
79.1
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
78.8
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
78.6
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
78.3
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
78.2
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
77.9
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
77.6
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
77.5
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
77.3
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
77.3
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
77.2
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
77.2
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
77.1
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
77.0
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
76.8
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
76.6
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
76.2
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
76.1
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
76.1
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
76.1
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
75.9
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
75.6
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
75.5
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
75.1
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
75.0
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
74.5
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
74.1
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
73.6
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
73.5
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
73.4
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
73.4
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
73.3
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
73.2
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
73.2
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
73.1
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
73.1
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
73.0
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
72.8
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
72.7
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
72.7
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
72.5
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
72.4
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
72.4
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
72.2
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
71.9
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
71.9
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
71.8
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
71.8
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
71.5
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
71.5
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
71.0
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
70.9
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
70.1
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
69.7
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
69.6
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
69.4
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
69.3
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
68.9
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
68.9
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
68.7
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
68.5
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
68.5
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
68.5
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
68.5
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
68.3
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
68.1
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
68.0
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
67.4
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
67.3
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
67.1
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
67.1
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
67.0
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
66.7
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
66.6
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
66.5
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
66.5
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
66.3
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
66.3
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
66.2
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
66.1
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
66.0
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
66.0
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
65.9
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
65.6
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
65.3
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
65.0
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
64.9
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
64.9
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
64.8
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
64.5
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
64.5
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
64.4
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
64.2
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
63.9
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
63.8
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
63.7
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
63.5
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
63.5
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
63.5
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
63.4
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
63.0
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
62.9
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
62.5
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
62.3
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
61.6
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
61.4
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
61.4
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
61.4
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
61.3
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
61.2
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
61.2
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
61.0
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
60.8
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
60.7
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
60.6
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
60.5
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
60.4
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
60.4
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
60.3
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
60.3
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
60.2
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
60.1
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
59.9
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
59.9
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
59.7
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
59.6
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
59.6
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
59.1
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
58.9
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
58.8
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
58.8
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
58.7
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
58.7
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
57.6
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
57.6
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
57.5
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
57.3
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
57.2
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
57.2
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
57.2
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
57.0
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
56.8
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
56.8
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
56.7
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
56.7
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
56.7
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
56.6
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
56.1
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
56.0
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
56.0
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
55.8
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
55.5
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
55.5
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
55.4
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
55.3
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
55.1
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
55.1
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
55.1
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
54.9
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
54.9
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
54.8
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
54.7
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
54.6
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
54.5
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
54.4
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
54.3
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
54.3
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
54.1
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
53.7
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
53.7
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
53.5
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
53.4
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
53.3
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
53.0
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
53.0
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
53.0
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
52.9
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
52.9
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
52.8
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
52.6
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
52.6
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
52.5
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
52.3
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
52.2
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
52.1
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
51.9
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
51.8
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
51.4
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
51.3
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
51.1
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
51.0
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
50.9
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
50.8
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
50.8
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
50.7
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
50.4
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
50.0
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
49.8
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
49.5
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
49.4
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
49.3
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
49.3
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
49.2
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
49.0
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
48.9
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
48.9
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
48.8
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
48.6
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
48.5
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
48.5
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
48.3
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
48.1
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
48.1
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
48.0
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
48.0
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
47.8
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
47.7
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
47.6
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
47.3
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
47.2
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
47.1
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
47.0
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
46.9
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
46.5
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
46.5
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
46.4
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
46.3
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
46.2
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
45.9
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
45.8
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
45.6
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
45.6
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
45.5
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
45.5
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
45.4
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
45.4
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
45.3
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
45.3
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
45.2
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
45.2
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
45.1
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
45.0
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
44.9
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
44.8
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
44.5
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
44.4
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
44.4
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
44.3
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
44.3
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
44.0
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
43.6
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
43.5
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
43.3
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
43.3
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
43.1
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
43.1
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
43.1
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
43.0
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
42.5
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
42.5
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
42.4
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
42.2
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
42.1
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
42.0
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
42.0
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
41.9
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
41.4
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
41.1
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
41.1
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
40.9
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
40.8
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
40.8
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
40.7
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
40.6
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
40.3
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
40.2
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
39.9
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
39.9
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
39.8
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
39.7
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
39.7
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
39.6
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
39.4
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
39.3
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
39.1
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
38.6
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
37.5
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
37.4
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
37.3
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
37.3
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
37.2
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
36.9
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
36.8
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
36.7
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
36.7
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
35.9
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
35.7
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
35.5
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
35.2
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
35.0
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
34.9
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
34.7
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
34.5
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
34.1
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
34.0
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
33.6
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
33.3
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
33.2
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
33.1
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
33.0
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
33.0
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
32.7
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
32.6
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
32.3
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
32.0
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
31.9
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
31.6
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
31.4
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
31.4
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
31.3
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
31.2
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
31.2
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
31.1
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
31.1
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
30.6
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
30.4
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
29.8
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
29.2
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
29.1
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
29.0
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
28.5
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
28.4
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
28.1
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
28.1
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
27.5
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
27.1
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
26.9
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
26.3
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
26.2
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
26.0
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
25.5
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
25.4
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
25.4
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
25.3
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
25.1
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
24.8
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
24.6
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
24.0
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
23.2
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
23.1
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
22.7
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
22.6
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
22.4
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
22.0
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
21.8
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
21.4
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
21.2
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
21.1
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
20.9
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
20.9
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
20.8
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
20.7
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
20.3
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
19.7
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
19.7
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
18.9
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
18.5
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
18.4
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
17.6
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
17.5
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
16.1
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
15.5
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
13.8
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
12.3
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
10.8
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
10.8
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
9.8
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
9.5
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
8.3
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
7.5
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TMEM30A is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
87.4
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
260.7
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
176.3
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
159.2
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
158.7
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
150.2
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
143.3
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
137.2
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
133.0
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
132.7
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
129.5
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
127.6
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
127.4
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
127.0
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
122.9
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
121.4
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
120.3
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
119.6
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
118.6
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
118.4
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
116.7
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
116.1
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
114.6
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
110.3
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
110.3
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
109.5
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
103.9
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
103.0
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
101.0
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
101.0
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
99.9
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
98.8
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
97.4
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
96.2
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
95.3
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
94.9
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
94.3
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
91.9
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
91.6
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
90.9
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
90.5
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
89.6
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
89.0
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
88.8
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
86.6
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
86.2
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
85.6
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
84.9
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
84.5
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
83.2
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
81.8
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
81.7
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
81.2
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
78.9
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
78.6
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
78.1
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
78.0
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
77.9
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
77.7
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
77.4
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
76.8
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
76.4
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
76.3
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
76.2
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
76.1
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
75.9
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
74.9
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
71.1
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
69.8
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
69.8
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
68.1
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
67.8
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
66.0
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
65.0
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
64.4
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
63.8
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
63.3
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
63.1
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
61.9
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
59.5
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
58.5
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
58.4
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
55.6
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
55.1
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
55.0
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
55.0
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
53.5
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
51.5
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
50.4
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
50.2
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
50.0
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
48.5
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
46.0
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
45.4
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
43.0
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
41.5
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
41.0
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
39.6
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
31.5
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
27.0
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TMEM30A is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
42.8
Number of samples
282
Samples
Sample
Description
TPM
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
223.7
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
164.6
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
146.2
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
138.1
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
136.0
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
118.8
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
103.2
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
99.5
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
94.4
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
90.6
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
88.8
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
88.0
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
84.4
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
82.6
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
81.5
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
81.1
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
78.6
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
78.4
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
77.8
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
76.9
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
75.9
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
74.6
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
73.3
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
73.1
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
72.7
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
72.5
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
72.4
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
71.7
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
71.5
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
71.4
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
71.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
70.8
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
70.7
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
69.1
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
68.9
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
68.3
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
67.1
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
66.9
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
64.8
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
64.0
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
63.9
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
63.7
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
63.7
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
63.3
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
63.1
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
63.1
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
63.0
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
62.5
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
62.3
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
60.5
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
59.9
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
59.9
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
59.9
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
59.4
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
59.4
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
59.3
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
59.2
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
58.9
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
58.9
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
58.8
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
57.9
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
57.6
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
57.4
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
57.2
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
56.7
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
56.4
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
55.9
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
55.2
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
54.8
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
54.1
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
54.0
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
54.0
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
53.5
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
52.8
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
52.7
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
52.6
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
52.3
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
51.8
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
51.4
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
50.9
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
50.9
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
50.9
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
50.6
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
50.5
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
49.6
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
49.3
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
49.2
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
48.9
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
48.9
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
48.9
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
48.3
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
48.3
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
48.1
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
47.9
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
47.6
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
47.4
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
47.0
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
46.8
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
46.7
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
46.4
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
46.0
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
45.7
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
45.3
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
45.2
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
44.8
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
44.7
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
44.6
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
44.5
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
44.4
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
44.2
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
44.0
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
43.8
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
43.8
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
43.7
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
43.6
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
43.5
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
42.3
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
42.1
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
41.6
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
41.4
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
41.4
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
41.3
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
41.1
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
41.0
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
40.8
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
40.8
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
40.8
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
40.6
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
40.5
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
40.4
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
40.3
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
40.2
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
40.0
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
40.0
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
39.7
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
39.1
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
38.8
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
38.8
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
38.7
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
38.6
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
38.5
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
38.3
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
38.1
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
37.5
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
37.5
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
37.3
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
37.2
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
37.2
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
37.1
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
37.1
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
36.6
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
36.4
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
36.4
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
36.4
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
36.3
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
36.0
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
35.9
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
35.9
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
35.6
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
35.5
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
34.8
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
34.5
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
34.4
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
34.3
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
34.3
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
34.3
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
34.3
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
34.0
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
33.9
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
33.8
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
33.5
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
33.3
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
33.2
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
33.0
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
32.6
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
32.5
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
32.5
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
32.4
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
32.3
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
32.0
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
32.0
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
31.9
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
31.9
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
31.8
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
31.7
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
31.4
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
31.4
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
30.1
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
29.8
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
29.3
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
29.1
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
28.8
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
28.6
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
28.2
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
28.2
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
28.2
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
28.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
27.9
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
27.8
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
27.7
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
27.7
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
27.2
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
27.2
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
26.9
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
26.8
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
26.8
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
26.7
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
26.3
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
26.1
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
25.7
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
25.4
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
25.4
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
25.4
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
25.0
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
24.8
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
24.4
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
24.4
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
24.3
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
24.3
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
23.9
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
23.4
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
23.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
22.9
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
22.7
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
22.7
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
22.5
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
21.9
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
21.7
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
21.6
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
21.6
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
21.3
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
21.1
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
21.1
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
20.9
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
20.8
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
20.6
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
20.5
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
20.1
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
20.1
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
20.0
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
19.9
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
19.9
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
19.8
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
19.8
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
19.7
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
19.6
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
19.2
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
19.0
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
18.8
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
18.7
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
18.1
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
17.8
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
17.5
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
17.4
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
17.4
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
16.9
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
16.8
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
16.8
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
16.6
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
16.3
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
15.6
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
15.6
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
15.2
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
14.9
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
14.6
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
14.1
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
13.9
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
13.8
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
13.2
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
13.2
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
12.6
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
12.3
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
12.1
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
12.0
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
11.8
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
11.8
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
11.3
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
10.4
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
10.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
9.5
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
6.5
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
6.0
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RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0069000003
Tumor
1.5
CPT0007320003
Tumor
1.3
CPT0019130003
Tumor
1.0
CPT0006440003
Tumor
0.9
CPT0014450004
Tumor
0.8
CPT0092160003
Tumor
0.8
CPT0006900003
Tumor
0.7
CPT0000640003
Tumor
0.6
CPT0063320003
Tumor
0.6
CPT0065750003
Tumor
0.6
CPT0079380003
Tumor
0.6
CPT0011410003
Tumor
0.6
CPT0025050003
Tumor
0.6
CPT0077490003
Tumor
0.5
CPT0089020003
Tumor
0.5
CPT0014370004
Tumor
0.5
CPT0077110003
Tumor
0.5
CPT0086950003
Tumor
0.5
CPT0025580004
Tumor
0.5
CPT0026410003
Tumor
0.4
CPT0025880003
Tumor
0.4
CPT0087040003
Tumor
0.4
CPT0078930003
Tumor
0.4
CPT0012080003
Tumor
0.4
CPT0065870003
Tumor
0.4
CPT0086820003
Tumor
0.4
CPT0025230003
Tumor
0.3
CPT0085670003
Tumor
0.3
CPT0079410003
Tumor
0.3
CPT0001220008
Tumor
0.3
CPT0088630003
Tumor
0.3
CPT0065430003
Tumor
0.3
CPT0009060003
Tumor
0.3
CPT0010160003
Tumor
0.3
CPT0078990003
Tumor
0.3
CPT0025350003
Tumor
0.3
CPT0015810003
Tumor
0.3
CPT0079480003
Tumor
0.3
CPT0078660003
Tumor
0.3
CPT0001500009
Tumor
0.3
CPT0015730003
Tumor
0.3
CPT0012280003
Tumor
0.3
CPT0079230003
Tumor
0.3
CPT0023350003
Tumor
0.3
CPT0009000003
Tumor
0.3
CPT0010110003
Tumor
0.3
CPT0012670003
Tumor
0.3
CPT0078800003
Tumor
0.2
CPT0077310003
Tumor
0.2
CPT0000870016
Tumor
0.2
CPT0089460004
Tumor
0.2
CPT0086360003
Tumor
0.2
CPT0076330003
Tumor
0.2
CPT0089480003
Normal
0.2
CPT0088900003
Tumor
0.2
CPT0071150004
Tumor
0.2
CPT0021240003
Tumor
0.2
CPT0063630003
Tumor
0.2
CPT0088760003
Tumor
0.2
CPT0088480003
Tumor
0.2
CPT0065450001
Normal
0.1
CPT0024670003
Tumor
0.1
CPT0001260009
Tumor
0.1
CPT0079270003
Tumor
0.1
CPT0075720003
Tumor
0.1
CPT0025110003
Tumor
0.1
CPT0092790003
Tumor
0.1
CPT0092730003
Tumor
0.1
CPT0092800003
Normal
0.1
CPT0088710001
Normal
0.1
CPT0023710001
Normal
0.1
CPT0025290003
Tumor
0.1
CPT0092290003
Tumor
0.1
CPT0088640003
Normal
0.1
CPT0078830003
Tumor
0.1
CPT0092310003
Normal
0.1
CPT0014160003
Tumor
0.1
CPT0000790001
Normal
0.1
CPT0026420001
Normal
0.1
CPT0006630003
Tumor
0.1
CPT0000780007
Tumor
0.1
CPT0075130003
Tumor
0.1
CPT0001540009
Tumor
0.0
CPT0092740003
Normal
0.0
CPT0065690003
Tumor
0.0
CPT0012370003
Tumor
0.0
CPT0065810003
Tumor
0.0
CPT0006950001
Normal
0.0
CPT0079180003
Tumor
0.0
CPT0012180003
Tumor
0.0
CPT0014350001
Normal
0.0
CPT0023690003
Tumor
0.0
CPT0065930003
Tumor
0.0
CPT0002270011
Tumor
0.0
CPT0081600003
Tumor
0.0
CPT0066480003
Tumor
0.0
CPT0017850003
Tumor
0.0
CPT0063640001
Normal
0.0
CPT0010170001
Normal
0.0
CPT0086830003
Normal
0.0
CPT0020120003
Tumor
-0.1
CPT0069010001
Normal
-0.1
CPT0023360001
Normal
-0.1
CPT0069160003
Tumor
-0.1
CPT0088500001
Normal
-0.1
CPT0015910003
Tumor
-0.1
CPT0001230001
Normal
-0.1
CPT0087050003
Normal
-0.1
CPT0077500001
Normal
-0.1
CPT0001510001
Normal
-0.1
CPT0012290003
Normal
-0.1
CPT0001190001
Normal
-0.1
CPT0001550001
Normal
-0.1
CPT0088780001
Normal
-0.1
CPT0001270001
Normal
-0.1
CPT0088920001
Normal
-0.1
CPT0078530001
Normal
-0.1
CPT0086030003
Tumor
-0.1
CPT0001350001
Normal
-0.1
CPT0000890001
Normal
-0.1
CPT0066470004
Tumor
-0.1
CPT0066430001
Normal
-0.2
CPT0089040001
Normal
-0.2
CPT0088970003
Tumor
-0.2
CPT0066520001
Normal
-0.2
CPT0077140001
Normal
-0.2
CPT0081990003
Tumor
-0.2
CPT0025170003
Tumor
-0.2
CPT0007470001
Normal
-0.2
CPT0081620001
Normal
-0.2
CPT0001340003
Tumor
-0.2
CPT0019990003
Tumor
-0.2
CPT0064370003
Tumor
-0.2
CPT0086890003
Normal
-0.2
CPT0084590001
Normal
-0.2
CPT0025920001
Normal
-0.2
CPT0012770003
Normal
-0.2
CPT0013790003
Normal
-0.2
CPT0079430001
Normal
-0.2
CPT0082010001
Normal
-0.2
CPT0086870003
Tumor
-0.2
CPT0000660001
Normal
-0.2
CPT0086970003
Normal
-0.2
CPT0025060001
Normal
-0.2
CPT0006730001
Normal
-0.2
CPT0020130001
Normal
-0.2
CPT0078840001
Normal
-0.2
CPT0020020001
Normal
-0.3
CPT0014130001
Normal
-0.3
CPT0002350011
Tumor
-0.3
CPT0065820001
Normal
-0.3
CPT0006530001
Normal
-0.3
CPT0078940001
Normal
-0.3
CPT0075170001
Normal
-0.3
CPT0088690003
Tumor
-0.3
CPT0088550004
Tumor
-0.3
CPT0019160001
Normal
-0.3
CPT0014470001
Normal
-0.3
CPT0081880003
Tumor
-0.4
CPT0079510001
Normal
-0.4
CPT0007860003
Tumor
-0.4
CPT0078670001
Normal
-0.4
CPT0077320001
Normal
-0.4
CPT0012090003
Normal
-0.4
CPT0018250001
Normal
-0.4
CPT0075570001
Normal
-0.4
CPT0012570003
Normal
-0.4
CPT0088570001
Normal
-0.4
CPT0025610001
Normal
-0.4
CPT0069190001
Normal
-0.4
CPT0086370003
Normal
-0.4
CPT0078510003
Tumor
-0.4
CPT0079000001
Normal
-0.4
CPT0063330001
Normal
-0.4
CPT0076350001
Normal
-0.5
CPT0075560003
Tumor
-0.5
CPT0064400001
Normal
-0.5
CPT0079300001
Normal
-0.5
CPT0001180009
Tumor
-0.5
CPT0017450001
Normal
-0.5
CPT0012640003
Normal
-0.5
CPT0002370001
Normal
-0.5
CPT0010120001
Normal
-0.6
CPT0084560003
Tumor
-0.6
CPT0012550003
Tumor
-0.6
CPT0012920003
Normal
-0.6
CPT0024680001
Normal
-0.6
CPT0007870001
Normal
-0.6
CPT0012900004
Tumor
-0.7
CPT0009020003
Normal
-0.7
CPT0092190003
Normal
-0.7
CPT0009080003
Normal
-0.7
CPT0011240003
Tumor
-0.8
CPT0017410003
Tumor
-0.9
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.