HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:69.7 nTPM
HPA Brain:31.8 nTPM
GTEx:69.7 nTPM
FANTOM5:17.7 Scaled Tags Per Million
Pig:10.7 nTPM
Mouse:5.6 nTPM
Allen mouse:0.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA029675Antibody HPA029676
Glial cells Not detectedNot detected
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 31.8
Sample id Sample description nTPM
Hippocampus
nTPM: 31.2
1898 Male, age 80, left hemisphere 35.3
2148 Female, age 91, left hemisphere 34.1
2529 Female, age 94, left hemisphere 32.3
1911 Female, age 85, right hemisphere 29.9
2621 Female, age 67, right hemisphere 29.1
1855 Male, age 76, left hemisphere 26.4
Dentate gyrus
nTPM: 28.8
2010 Male, age 76, both hemispheres 32.8
2246 Female, age 85, both hemispheres 30.3
1927 Female, age 91, both hemispheres 30.2
2530 Female, age 94, left hemisphere 28.4
2528 Male, age 74, both hemispheres 26.7
2531 Female, age 67, both hemispheres 24.3
Entorhinal gyrus
nTPM: 31.7
2117 Female, age 91, right hemisphere 35.7
2764 Male, age 80, right hemisphere 34.9
1787 Male, age 76, left hemisphere 34.8
1938 Female, age 85, left hemisphere 31.7
2686 Male, age 75, right hemisphere 28.4
2613 Female, age 94, left hemisphere 25.0
Hippocampus, CA1
nTPM: 30.0
2749 Male, age 80, left hemisphere 35.8
2082 Female, age 91, right hemisphere 31.8
2527 Male, age 74, both hemispheres 28.0
1873 Female, age 85, both hemispheres 27.5
2045 Male, age 76, both hemispheres 26.8
Hippocampus, CA2
nTPM: 31.1
1940 Female, age 85, left hemisphere 38.2
2249 Male, age 74, both hemispheres 33.6
1892 Male, age 76, both hemispheres 30.7
1963 Male, age 80, left hemisphere 28.6
2113 Female, age 91, right hemisphere 28.1
2437 Female, age 94, left hemisphere 27.3
Hippocampus, CA3
nTPM: 30.5
2436 Male, age 74, both hemispheres 42.1
1891 Female, age 85, both hemispheres 29.0
1867 Male, age 76, both hemispheres 28.9
2137 Male, age 80, left hemisphere 27.9
2620 Female, age 94, left hemisphere 27.7
2861 Female, age 67, both hemispheres 27.5
Parahippocampal cortex
nTPM: 28.7
2250 Female, age 67, right hemisphere 33.5
2245 Female, age 91, both hemispheres 33.2
1933 Female, age 85, both hemispheres 33.1
2018 Male, age 76, both hemispheres 31.2
2532 Female, age 72, left hemisphere 28.9
1850 Male, age 80, both hemispheres 27.8
1990 Female, age 91, right hemisphere 27.0
2692 Male, age 74, both hemispheres 25.3
2622 Female, age 67, right hemisphere 24.7
2693 Female, age 94, both hemispheres 21.9
Perirhinal gyrus
nTPM: 31.8
1794 Male, age 80, right hemisphere 39.0
1841 Female, age 85, right hemisphere 31.5
1847 Female, age 91, left hemisphere 31.5
2848 Male, age 76, right hemisphere 30.3
2521 Female, age 94, right hemisphere 26.9
Subiculum
nTPM: 27.3
1901 Male, age 80, both hemispheres 32.5
1977 Female, age 85, both hemispheres 28.8
2729 Female, age 91, right hemisphere 28.7
2042 Male, age 76, both hemispheres 26.6
2619 Male, age 74, both hemispheres 26.3
2438 Female, age 94, left hemisphere 21.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 69.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 69.7
Samples: 197

Max nTPM: 159.1
Min nTPM: 19.1
Std nTPM: 19.9
Median nTPM: 68.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 159.1
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 147.1
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 131.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 129.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 122.4
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 122.0
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 118.3
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 114.0
GTEX-1B933-0011-R1b-SM-9QEGW 50-59 years, female 111.8
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 105.9
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 102.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 17.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 17.7
FF:10153-102I9 76 years, female 25.1
FF:10169-103B7 60 years, female 10.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 10.7
Pig sample Sample description nTPM
Subiculum
nTPM: 8.8
Samples: 4

Max nTPM: 11.1
Min nTPM: 7.8
Sample A Female 11.1
Sample B Female 7.8
Sample C Male 8.3
Sample D Male 8.0
Dorsal hippocampus
nTPM: 10.2
Samples: 4

Max nTPM: 12.8
Min nTPM: 8.3
Sample A Female 12.8
Sample B Female 8.5
Sample C Male 11.3
Sample D Male 8.3
Entorhinal cortex
nTPM: 8.7
Samples: 4

Max nTPM: 11.2
Min nTPM: 7.3
Sample A Female 7.5
Sample B Female 8.8
Sample C Male 11.2
Sample D Male 7.3
Ventral hippocampus
nTPM: 10.7
Samples: 4

Max nTPM: 12.7
Min nTPM: 8.1
Sample A Female 11.3
Sample B Female 8.1
Sample C Male 12.7
Sample D Male 10.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 5.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 4.4
Samples: 4

Max nTPM: 4.5
Min nTPM: 4.3
Sample A Male 4.5
Sample B Male 4.3
Sample C Female 4.3
Sample D Female 4.5
Hippocampal formation
nTPM: 5.6
Samples: 4

Max nTPM: 5.9
Min nTPM: 5.2
Sample A Male 5.5
Sample B Male 5.2
Sample C Female 5.7
Sample D Female 5.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.4
69262317 Antisense, RP_050303_01_H09, Mouse strain C57BL/6J (56 days, male) 0.4

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