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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
95.6
nTPM
HPA Brain:
34.8
nTPM
GTEx:
95.6
nTPM
FANTOM5:
26.7
Scaled Tags Per Million
Pig:
10.3
nTPM
Mouse:
5.0
nTPM
Allen mouse:
0.2
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
34.8
Sample id
Sample description
nTPM
Amygdala nTPM: 34.8
2517
Female, age 94, left hemisphere
39.6
1987
Female, age 91, left hemisphere
39.4
2695
Female, age 67, right hemisphere
38.5
2514
Male, age 75, right hemisphere
30.8
2814
Male, age 76, right hemisphere
25.5
Basal amygdala nTPM: 30.7
2609
Male, age 75, right hemisphere
36.0
2110
Male, age 80, left hemisphere
32.2
2243
Female, age 91, right hemisphere
30.1
1955
Male, age 76, both hemispheres
29.0
2685
Female, age 94, left hemisphere
28.8
2827
Female, age 67, right hemisphere
27.9
Central amygdala nTPM: 31.9
2826
Female, age 94, left hemisphere
43.9
2515
Male, age 75, right hemisphere
33.4
2701
Female, age 91, right hemisphere
29.7
2239
Male, age 80, left hemisphere
28.2
1905
Male, age 76, both hemispheres
24.3
Corticomedial amygdala nTPM: 27.8
2829
Male, age 80, left hemisphere
35.4
2242
Female, age 91, right hemisphere
29.4
2429
Female, age 94, left hemisphere
28.0
2428
Male, age 75, right hemisphere
27.5
2535
Female, age 67, right hemisphere
23.6
2240
Male, age 76, both hemispheres
23.2
Lateral amygdala nTPM: 29.8
2516
Male, age 75, right hemisphere
35.6
2534
Female, age 94, left hemisphere
32.9
2255
Female, age 91, right hemisphere
30.2
2256
Male, age 80, left hemisphere
28.2
2830
Female, age 67, right hemisphere
26.2
1883
Male, age 76, both hemispheres
25.9
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
95.6
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 95.6
Samples: 152
Max nTPM: 273.8
Min nTPM: 25.3
Std nTPM: 36.1
Median nTPM: 93.4
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
273.8
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
235.0
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
211.4
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
200.9
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
200.7
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
179.7
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
164.5
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
162.4
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
149.3
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
145.9
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
143.0
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
141.5
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
138.8
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
138.5
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
131.8
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
127.8
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
125.6
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
124.5
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
123.6
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
121.2
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
120.3
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
119.7
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
118.4
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
116.6
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
115.9
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
115.9
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
115.8
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
115.1
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
114.8
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
114.7
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
113.2
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
112.8
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
112.6
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
112.2
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
112.1
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
111.3
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
111.3
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
109.7
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
109.1
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
108.6
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
107.6
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
107.6
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
106.7
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
104.9
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
104.8
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
104.4
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
103.9
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
103.6
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
103.5
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
102.9
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
102.1
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
102.0
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
101.7
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
101.6
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
101.6
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
101.4
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
101.3
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
100.9
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
100.8
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
100.7
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
100.4
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
100.1
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
99.9
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
99.6
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
99.1
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
98.4
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
96.9
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
96.4
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
96.3
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
96.2
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
95.5
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
95.4
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
94.6
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
94.2
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
93.6
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
93.4
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
93.4
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
93.3
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
93.1
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
91.9
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
91.3
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
91.2
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
90.8
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
90.2
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
89.6
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
89.3
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
89.2
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
88.8
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
88.7
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
88.2
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
88.1
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
86.9
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
86.8
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
86.6
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
85.8
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
84.3
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
83.9
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
83.8
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
83.0
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
82.6
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
82.4
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
82.1
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
81.8
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
80.9
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
80.6
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
80.4
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
80.2
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
79.6
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
77.4
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
77.3
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
76.3
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
75.9
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
75.9
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
75.0
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
74.7
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
73.4
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
72.6
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
72.2
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
71.9
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
71.9
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
68.5
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
67.5
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
67.5
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
67.0
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
65.4
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
65.2
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
65.1
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
64.8
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
63.1
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
63.0
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
62.8
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
62.1
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
61.8
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
59.2
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
58.7
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
58.2
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
57.6
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
57.0
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
55.2
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
53.7
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
53.7
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
52.8
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
51.3
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
47.3
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
46.5
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
42.8
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
41.1
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
35.6
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
32.6
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
32.0
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
25.9
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
25.3
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
5.0
Mouse sample
Sample description
nTPM
Amygdala nTPM: 5.0
Samples: 4
Max nTPM: 6.0
Min nTPM: 4.4
Sample A
Male
6.0
Sample B
Male
4.4
Sample C
Female
4.7
Sample D
Female
4.9
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.