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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SMAP1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
10.0
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
29.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
20.6
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
18.5
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
17.6
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
16.2
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
15.9
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
15.3
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
14.9
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
14.5
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
14.4
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
14.2
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
14.0
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
13.6
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
12.4
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
12.1
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
11.9
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
11.9
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
11.7
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
11.6
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
11.4
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
11.4
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
11.3
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
11.3
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
11.3
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
11.0
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
10.7
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
10.1
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
10.1
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
10.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
9.7
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
9.6
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
9.4
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
9.3
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
9.2
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
9.0
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
8.8
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
8.6
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
8.5
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
8.4
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
8.3
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
8.2
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
8.0
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
7.9
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
7.8
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
7.7
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
7.4
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
7.3
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
6.4
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
6.2
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
6.1
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
6.0
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
5.9
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
5.8
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
5.5
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
5.5
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
5.4
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
5.3
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
5.3
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
5.2
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
5.0
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
4.8
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
4.7
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
4.1
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SMAP1 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
14.3
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
41.4
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
37.0
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
34.1
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
28.7
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
26.2
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
25.7
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
25.3
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
24.4
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
24.4
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
24.1
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
24.1
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
23.8
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
23.6
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
23.4
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
23.4
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
23.3
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
23.3
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
23.2
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
23.0
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
22.8
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
22.7
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
22.6
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
22.5
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
22.5
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
22.3
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
22.1
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
22.1
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
22.1
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
21.9
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
21.7
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
21.6
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
21.5
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
21.4
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
21.4
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
21.3
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
21.3
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
21.3
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
21.1
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
21.0
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
20.9
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
20.9
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
20.9
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
20.9
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
20.8
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
20.8
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
20.8
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
20.6
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
20.6
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
20.6
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
20.5
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
20.5
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
20.4
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
20.3
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
20.3
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
20.0
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
20.0
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
20.0
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
20.0
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
19.9
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
19.9
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
19.9
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
19.8
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
19.8
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
19.7
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
19.7
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
19.7
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
19.7
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
19.7
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
19.6
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
19.6
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
19.5
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
19.5
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
19.5
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
19.4
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
19.4
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
19.3
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
19.3
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
19.3
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
19.3
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
19.2
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
19.2
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
19.1
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
19.1
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
19.1
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
19.0
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
19.0
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
19.0
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
19.0
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
18.9
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
18.9
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
18.8
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
18.8
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
18.8
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
18.7
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
18.7
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
18.7
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
18.6
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
18.6
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
18.5
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
18.5
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
18.4
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
18.4
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
18.4
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
18.4
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
18.4
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
18.4
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
18.3
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
18.3
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
18.3
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
18.3
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
18.3
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
18.3
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
18.2
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
18.2
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
18.2
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
18.1
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
18.1
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
18.0
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
18.0
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
18.0
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
18.0
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
18.0
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
18.0
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
17.9
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
17.9
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
17.9
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
17.9
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
17.9
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
17.9
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
17.8
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
17.8
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
17.8
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
17.8
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
17.8
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
17.7
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
17.7
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
17.7
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
17.6
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
17.6
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
17.5
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
17.5
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
17.4
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
17.4
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
17.4
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
17.3
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
17.3
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
17.3
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
17.2
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
17.1
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
17.1
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
17.1
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
17.1
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
17.1
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
17.1
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
17.0
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
17.0
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
16.9
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
16.9
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
16.9
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
16.9
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
16.9
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
16.8
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
16.8
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
16.8
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
16.8
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
16.7
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
16.7
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
16.6
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
16.6
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
16.6
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
16.5
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
16.5
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
16.5
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
16.4
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
16.4
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
16.4
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
16.4
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
16.3
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
16.3
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
16.3
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
16.3
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
16.2
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
16.2
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
16.2
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
16.1
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
16.1
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
16.1
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
16.1
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
16.1
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
16.0
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
16.0
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
15.9
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
15.8
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
15.8
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
15.8
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
15.7
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
15.7
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
15.7
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
15.7
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
15.6
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
15.6
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
15.6
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
15.6
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
15.6
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
15.6
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
15.6
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
15.5
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
15.5
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
15.5
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
15.5
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
15.5
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
15.5
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
15.5
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
15.5
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
15.4
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
15.4
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
15.4
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
15.4
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
15.4
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
15.4
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
15.4
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
15.3
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
15.3
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
15.3
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
15.3
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
15.3
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
15.3
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
15.3
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
15.3
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
15.3
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
15.3
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
15.2
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
15.2
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
15.2
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
15.2
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
15.2
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
15.1
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
15.1
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
15.1
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
15.0
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
15.0
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
15.0
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
15.0
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
14.9
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
14.9
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
14.9
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
14.9
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
14.9
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
14.8
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
14.8
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
14.8
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
14.8
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
14.7
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
14.7
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
14.7
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
14.7
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
14.6
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
14.6
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
14.6
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
14.5
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
14.5
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
14.5
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
14.4
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
14.4
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
14.4
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
14.4
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
14.4
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
14.4
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
14.4
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
14.3
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
14.3
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
14.3
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
14.3
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
14.3
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
14.2
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
14.2
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
14.2
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
14.1
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
14.1
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
14.1
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
14.1
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
14.1
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
14.1
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
14.1
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
14.1
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
14.0
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
14.0
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
14.0
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
13.9
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
13.9
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
13.9
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
13.8
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
13.8
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
13.7
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
13.7
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
13.7
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
13.6
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
13.6
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
13.6
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
13.5
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
13.5
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
13.5
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
13.5
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
13.5
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
13.5
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
13.4
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
13.4
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
13.4
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
13.4
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
13.3
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
13.3
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
13.3
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
13.3
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
13.2
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
13.2
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
13.2
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
13.2
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
13.2
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
13.2
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
13.1
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
13.1
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
13.1
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
13.1
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
13.1
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
13.0
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
12.9
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
12.9
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
12.8
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
12.8
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
12.8
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
12.8
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
12.8
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
12.7
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
12.7
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
12.6
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
12.6
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
12.6
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
12.5
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
12.5
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
12.4
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
12.4
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
12.3
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
12.3
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
12.3
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
12.3
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
12.3
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
12.2
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
12.2
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
12.2
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
12.2
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
12.2
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
12.1
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
12.1
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
12.1
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
12.0
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
12.0
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
12.0
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
12.0
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
11.9
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
11.9
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
11.9
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
11.7
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
11.7
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
11.7
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
11.6
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
11.6
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
11.5
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
11.5
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
11.5
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
11.5
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
11.5
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
11.5
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
11.4
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
11.4
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
11.4
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
11.3
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
11.3
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
11.3
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
11.2
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
11.1
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
11.1
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
10.9
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
10.9
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
10.9
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
10.9
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
10.9
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
10.9
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
10.9
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
10.9
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
10.8
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
10.7
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
10.7
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
10.7
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
10.7
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
10.6
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
10.6
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
10.6
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
10.6
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
10.6
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
10.5
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
10.5
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
10.5
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
10.5
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
10.5
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
10.5
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
10.4
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
10.4
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
10.4
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
10.4
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
10.3
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
10.3
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
10.2
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
10.2
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
10.2
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
10.2
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
10.2
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
10.1
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
10.0
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
10.0
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
9.9
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
9.9
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
9.9
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
9.9
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
9.8
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
9.8
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
9.8
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
9.7
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
9.6
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
9.6
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
9.5
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
9.4
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
9.4
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
9.4
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
9.4
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
9.4
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
9.4
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
9.4
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
9.3
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
9.3
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
9.3
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
9.3
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
9.2
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
9.2
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
9.2
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
9.1
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
9.1
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
9.0
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
8.9
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
8.9
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
8.8
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
8.8
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
8.8
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
8.7
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
8.7
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
8.7
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
8.7
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
8.6
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
8.4
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
8.3
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
8.2
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
8.2
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
8.2
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
8.2
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
8.1
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
8.1
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
8.1
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
8.0
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
8.0
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
7.9
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
7.9
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
7.8
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
7.7
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
7.7
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
7.6
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
7.6
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
7.6
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
7.5
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
7.5
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
7.5
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
7.5
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
7.4
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
7.4
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
7.3
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
7.3
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
7.2
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
7.2
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
7.2
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
7.2
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
7.2
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
7.2
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
7.1
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
7.0
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
6.8
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
6.8
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
6.7
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
6.7
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
6.7
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
6.5
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
6.4
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
6.4
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
6.1
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
5.9
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
5.9
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
5.8
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
5.7
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
5.5
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
5.5
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
5.2
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
5.1
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
5.0
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
4.6
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
4.5
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
4.5
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
4.2
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
3.7
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
3.4
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
3.4
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
3.2
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
2.7
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
2.3
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SMAP1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
17.3
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
38.3
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
26.5
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
25.7
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
25.6
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
25.3
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
25.0
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
25.0
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
24.8
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
24.7
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
24.5
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
24.3
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
24.0
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
24.0
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
23.2
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
22.7
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
22.5
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
22.5
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
22.1
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
22.0
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
22.0
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
21.8
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
21.6
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
21.3
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
21.2
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
21.0
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
20.6
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
20.5
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
20.0
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
20.0
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
20.0
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
19.9
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
19.8
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
19.6
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
19.5
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
19.4
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
19.3
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
19.0
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
18.9
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
18.8
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
18.7
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
18.4
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
18.3
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
18.0
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
17.8
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
17.8
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
17.7
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
17.7
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
17.4
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
17.4
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
17.4
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
17.3
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
17.3
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
17.1
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
17.1
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
16.9
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
16.8
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
16.7
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
16.5
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
16.3
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
16.1
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
15.8
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
15.5
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
15.2
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
15.1
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
15.1
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
15.0
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
14.9
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
14.8
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
14.6
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
14.6
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
14.5
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
14.4
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
14.3
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
14.2
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
14.0
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
14.0
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
13.3
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
12.7
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
12.7
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
12.7
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
12.5
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
12.4
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
12.3
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
12.3
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
11.7
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
11.5
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
11.4
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
11.4
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
11.2
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
11.2
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
11.0
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
10.7
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
10.7
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
10.5
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
10.0
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
9.2
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
8.9
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
8.6
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
6.0
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SMAP1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
14.5
Number of samples
282
Samples
Sample
Description
TPM
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
53.8
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
46.8
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
39.9
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
35.6
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
35.2
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
33.8
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
31.0
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
30.6
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
30.1
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
29.0
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
28.1
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
28.0
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
27.8
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
26.8
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
26.3
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
26.1
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
25.1
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
25.1
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
25.0
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
25.0
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
24.7
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
24.4
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
24.4
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
24.3
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
24.1
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
23.9
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
23.8
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
23.7
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
23.2
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
22.8
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
22.5
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
22.4
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
22.3
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
22.3
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
22.2
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
21.7
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
21.5
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
21.3
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
21.1
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
21.1
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
21.0
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
20.8
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
20.5
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
20.4
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
20.4
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
20.3
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
20.2
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
20.2
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
20.2
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
20.1
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
20.0
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
19.9
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
19.9
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
19.9
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
19.8
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
19.8
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
19.8
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
19.7
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
19.2
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
18.8
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
18.8
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
18.7
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
18.6
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
18.6
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
18.5
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
18.4
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
18.4
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
18.3
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
18.3
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
18.2
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
18.0
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
17.9
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
17.7
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
17.7
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
17.6
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
17.6
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
17.4
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
17.3
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
17.2
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
17.1
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
16.9
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
16.9
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
16.8
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
16.8
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
16.7
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
16.7
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
16.6
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
16.4
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
16.3
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
16.3
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
16.3
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
16.1
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
15.9
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
15.9
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
15.8
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
15.7
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
15.6
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
15.5
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
15.4
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
15.4
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
15.3
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
15.2
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
15.2
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
15.1
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
15.1
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
14.9
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
14.9
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
14.9
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
14.9
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
14.9
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
14.8
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
14.8
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
14.7
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
14.7
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
14.7
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
14.5
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
14.3
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
14.2
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
14.2
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
14.2
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
14.2
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
14.1
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
14.0
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
14.0
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
13.9
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
13.9
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
13.9
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
13.9
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
13.9
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
13.8
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
13.8
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
13.8
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
13.7
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
13.7
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
13.7
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
13.6
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
13.6
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
13.5
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
13.5
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
13.4
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
13.4
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
13.4
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
13.4
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
13.4
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
13.4
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
13.3
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
13.3
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
13.2
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
13.2
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
13.1
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
13.0
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
12.9
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
12.8
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
12.8
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
12.7
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
12.7
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
12.6
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
12.6
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
12.5
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
12.5
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
12.4
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
12.3
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
12.3
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
12.2
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
12.2
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
12.1
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
12.1
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
12.0
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
12.0
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
11.9
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
11.9
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
11.9
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
11.9
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
11.9
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
11.8
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
11.8
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
11.7
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
11.7
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
11.7
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
11.7
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
11.6
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
11.6
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
11.5
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
11.5
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
11.4
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
11.4
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
11.4
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
11.4
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
11.4
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
11.3
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
11.3
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
11.2
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
11.2
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
11.2
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
11.1
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
10.9
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
10.9
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
10.9
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
10.9
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
10.9
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
10.8
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
10.8
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
10.7
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
10.4
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
10.4
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
10.4
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
10.2
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
10.2
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
10.2
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
10.1
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
10.1
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
10.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
9.9
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
9.9
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
9.8
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
9.8
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
9.8
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
9.7
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
9.7
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
9.6
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
9.6
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
9.6
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
9.6
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
9.6
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
9.5
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
9.4
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
9.2
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
9.0
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
9.0
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
8.9
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
8.7
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
8.7
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
8.7
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
8.6
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
8.5
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
8.4
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
8.3
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
8.2
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
8.1
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
8.1
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
7.9
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
7.9
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
7.7
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
7.7
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
7.6
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
7.6
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
7.4
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
7.3
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
7.3
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
7.1
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
7.1
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
7.1
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
7.0
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
7.0
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
7.0
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
6.9
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
6.8
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
6.7
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
6.6
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
6.4
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
6.4
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
6.3
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
6.3
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
6.2
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
6.2
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
6.1
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
6.0
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
6.0
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
6.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
5.9
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
5.7
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
5.6
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
5.5
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
5.0
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
4.5
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
4.3
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
4.3
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
4.2
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
4.2
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
3.8
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
3.1
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
2.5
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0078800003
Tumor
0.6
CPT0014160003
Tumor
0.6
CPT0002270011
Tumor
0.6
CPT0078830003
Tumor
0.6
CPT0092290003
Tumor
0.5
CPT0065870003
Tumor
0.4
CPT0065430003
Tumor
0.4
CPT0015730003
Tumor
0.4
CPT0001270001
Normal
0.4
CPT0078530001
Normal
0.4
CPT0012570003
Normal
0.4
CPT0001260009
Tumor
0.3
CPT0001540009
Tumor
0.3
CPT0071150004
Tumor
0.3
CPT0007320003
Tumor
0.3
CPT0088920001
Normal
0.3
CPT0001220008
Tumor
0.3
CPT0066430001
Normal
0.3
CPT0076350001
Normal
0.3
CPT0075570001
Normal
0.3
CPT0089480003
Normal
0.3
CPT0012090003
Normal
0.3
CPT0007870001
Normal
0.3
CPT0009060003
Tumor
0.3
CPT0078840001
Normal
0.3
CPT0092800003
Normal
0.3
CPT0065750003
Tumor
0.3
CPT0092160003
Tumor
0.3
CPT0079430001
Normal
0.3
CPT0086360003
Tumor
0.2
CPT0013790003
Normal
0.2
CPT0006630003
Tumor
0.2
CPT0014350001
Normal
0.2
CPT0023710001
Normal
0.2
CPT0086970003
Normal
0.2
CPT0001190001
Normal
0.2
CPT0000890001
Normal
0.2
CPT0006950001
Normal
0.2
CPT0079380003
Tumor
0.2
CPT0088550004
Tumor
0.2
CPT0063640001
Normal
0.2
CPT0017450001
Normal
0.2
CPT0006730001
Normal
0.2
CPT0019130003
Tumor
0.2
CPT0001350001
Normal
0.2
CPT0069000003
Tumor
0.2
CPT0082010001
Normal
0.2
CPT0064370003
Tumor
0.2
CPT0079000001
Normal
0.2
CPT0010110003
Tumor
0.2
CPT0086820003
Tumor
0.2
CPT0065450001
Normal
0.2
CPT0010120001
Normal
0.2
CPT0085670003
Tumor
0.2
CPT0025610001
Normal
0.2
CPT0020130001
Normal
0.2
CPT0001340003
Tumor
0.2
CPT0088480003
Tumor
0.2
CPT0077500001
Normal
0.2
CPT0023360001
Normal
0.2
CPT0078670001
Normal
0.2
CPT0088780001
Normal
0.2
CPT0001500009
Tumor
0.2
CPT0000790001
Normal
0.2
CPT0086830003
Normal
0.2
CPT0002370001
Normal
0.2
CPT0064400001
Normal
0.1
CPT0007470001
Normal
0.1
CPT0092740003
Normal
0.1
CPT0088570001
Normal
0.1
CPT0006530001
Normal
0.1
CPT0078940001
Normal
0.1
CPT0089040001
Normal
0.1
CPT0009020003
Normal
0.1
CPT0023350003
Tumor
0.1
CPT0079300001
Normal
0.1
CPT0012770003
Normal
0.1
CPT0001550001
Normal
0.1
CPT0092190003
Normal
0.1
CPT0088640003
Normal
0.1
CPT0079230003
Tumor
0.1
CPT0081620001
Normal
0.1
CPT0088710001
Normal
0.1
CPT0081990003
Tumor
0.1
CPT0087050003
Normal
0.1
CPT0069010001
Normal
0.1
CPT0086370003
Normal
0.1
CPT0077140001
Normal
0.1
CPT0000660001
Normal
0.1
CPT0019160001
Normal
0.1
CPT0086950003
Tumor
0.1
CPT0009080003
Normal
0.1
CPT0010170001
Normal
0.1
CPT0075130003
Tumor
0.1
CPT0079180003
Tumor
0.1
CPT0011410003
Tumor
0.1
CPT0078930003
Tumor
0.1
CPT0063320003
Tumor
0.1
CPT0025920001
Normal
0.1
CPT0006900003
Tumor
0.1
CPT0020020001
Normal
0.1
CPT0025060001
Normal
0.1
CPT0088900003
Tumor
0.1
CPT0026410003
Tumor
0.1
CPT0069190001
Normal
0.1
CPT0086030003
Tumor
0.1
CPT0065820001
Normal
0.1
CPT0066520001
Normal
0.1
CPT0079270003
Tumor
0.1
CPT0075170001
Normal
0.1
CPT0025050003
Tumor
0.1
CPT0079410003
Tumor
0.1
CPT0018250001
Normal
0.1
CPT0063330001
Normal
0.1
CPT0026420001
Normal
0.1
CPT0079510001
Normal
0.1
CPT0014450004
Tumor
0.1
CPT0012920003
Normal
0.1
CPT0025580004
Tumor
0.1
CPT0014470001
Normal
0.1
CPT0086890003
Normal
0.1
CPT0025880003
Tumor
0.1
CPT0088500001
Normal
0.0
CPT0012640003
Normal
0.0
CPT0012370003
Tumor
0.0
CPT0019990003
Tumor
0.0
CPT0009000003
Tumor
0.0
CPT0012290003
Normal
0.0
CPT0014130001
Normal
0.0
CPT0012280003
Tumor
0.0
CPT0015810003
Tumor
0.0
CPT0066470004
Tumor
0.0
CPT0017850003
Tumor
0.0
CPT0021240003
Tumor
0.0
CPT0076330003
Tumor
0.0
CPT0092790003
Tumor
0.0
CPT0081600003
Tumor
0.0
CPT0088690003
Tumor
0.0
CPT0077320001
Normal
0.0
CPT0084590001
Normal
0.0
CPT0077310003
Tumor
0.0
CPT0017410003
Tumor
0.0
CPT0069160003
Tumor
-0.1
CPT0001510001
Normal
-0.1
CPT0024680001
Normal
-0.1
CPT0015910003
Tumor
-0.1
CPT0007860003
Tumor
-0.1
CPT0065810003
Tumor
-0.1
CPT0092310003
Normal
-0.1
CPT0087040003
Tumor
-0.1
CPT0001230001
Normal
-0.1
CPT0065690003
Tumor
-0.1
CPT0065930003
Tumor
-0.1
CPT0088760003
Tumor
-0.1
CPT0011240003
Tumor
-0.1
CPT0025170003
Tumor
-0.1
CPT0089460004
Tumor
-0.1
CPT0092730003
Tumor
-0.1
CPT0088630003
Tumor
-0.1
CPT0066480003
Tumor
-0.1
CPT0000870016
Tumor
-0.1
CPT0025110003
Tumor
-0.1
CPT0020120003
Tumor
-0.1
CPT0025230003
Tumor
-0.1
CPT0063630003
Tumor
-0.1
CPT0023690003
Tumor
-0.2
CPT0025290003
Tumor
-0.2
CPT0075720003
Tumor
-0.2
CPT0078990003
Tumor
-0.2
CPT0024670003
Tumor
-0.2
CPT0078660003
Tumor
-0.2
CPT0012900004
Tumor
-0.2
CPT0010160003
Tumor
-0.2
CPT0001180009
Tumor
-0.2
CPT0000780007
Tumor
-0.2
CPT0079480003
Tumor
-0.2
CPT0077110003
Tumor
-0.2
CPT0088970003
Tumor
-0.2
CPT0081880003
Tumor
-0.3
CPT0086870003
Tumor
-0.3
CPT0075560003
Tumor
-0.3
CPT0012670003
Tumor
-0.3
CPT0089020003
Tumor
-0.3
CPT0025350003
Tumor
-0.3
CPT0078510003
Tumor
-0.3
CPT0077490003
Tumor
-0.3
CPT0012080003
Tumor
-0.4
CPT0084560003
Tumor
-0.4
CPT0000640003
Tumor
-0.5
CPT0012180003
Tumor
-0.5
CPT0002350011
Tumor
-0.5
CPT0014370004
Tumor
-0.5
CPT0006440003
Tumor
-0.5
CPT0012550003
Tumor
-0.6
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
